메뉴 건너뛰기




Volumn 4, Issue 1, 2008, Pages

High parallelism, portability, and broad accessibility: Technologies for genomics

Author keywords

Biosensors; Genomics; Microarrays; Point of care diagnostics

Indexed keywords

BROAD ACCESSIBILITY; MOLECULAR EVENTS;

EID: 42149170551     PISSN: 15504832     EISSN: 15504840     Source Type: Journal    
DOI: 10.1145/1330521.1330524     Document Type: Article
Times cited : (7)

References (114)
  • 1
    • 0034658890 scopus 로고    scopus 로고
    • Preparation of dna and protein microarrays on glass slides coated with an agarose film
    • AFANASSIEV V., HANEMANN V. 2000. Preparation of dna and protein microarrays on glass slides coated with an agarose film. Nucleic Acids Res. 28, 126, e66-e66.
    • (2000) Nucleic Acids Res , vol.28 , Issue.126
    • AFANASSIEV, V.1    HANEMANN, V.2
  • 2
    • 1542399989 scopus 로고    scopus 로고
    • FatiGO: A web tool for finding significant associations of Gene Ontology terms with groups of genes
    • AL-SHAHROUR, P., DÍAZ-URIARTE, R., AND DOPAZO, J. 2004. FatiGO: A web tool for finding significant associations of Gene Ontology terms with groups of genes. Bioinformatics 20, 4, 578-580.
    • (2004) Bioinformatics , vol.20 , Issue.4 , pp. 578-580
    • AL-SHAHROUR, P.1    DÍAZ-URIARTE, R.2    DOPAZO, J.3
  • 4
    • 0034598746 scopus 로고    scopus 로고
    • ALIZADEH, A., EISEN, M., DAVIS, R., C. MA, I. L., ROSENWALD, A., BOLDRICK, J., SABET, H., TRAN, T., YU, X., POWELL, J., YANG, L., MARTI, G., MOORE, T., JR, J. H., LU, L., LEWIS, D., TIBSHIRANI, R., SHERLOCK, G., CHAN, W., GREINER, T., WEISENBURGER, D., ARMITAGE, J., WARNKE, R., LEVY, R., WILSON, W., GREVER, M., BYRD, J., BOTSTEIN, D., BROWN, P., AND STAUDT, L. 2000. Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature 403, 6769, 503-511.
    • ALIZADEH, A., EISEN, M., DAVIS, R., C. MA, I. L., ROSENWALD, A., BOLDRICK, J., SABET, H., TRAN, T., YU, X., POWELL, J., YANG, L., MARTI, G., MOORE, T., JR, J. H., LU, L., LEWIS, D., TIBSHIRANI, R., SHERLOCK, G., CHAN, W., GREINER, T., WEISENBURGER, D., ARMITAGE, J., WARNKE, R., LEVY, R., WILSON, W., GREVER, M., BYRD, J., BOTSTEIN, D., BROWN, P., AND STAUDT, L. 2000. Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature 403, 6769, 503-511.
  • 6
    • 42149176225 scopus 로고    scopus 로고
    • Fast, cheap and somewhat in control
    • ARKIN, A. P. AND FLETCHER, D. A. 2004. Fast, cheap and somewhat in control. Genome Biol. 7, 11.
    • (2004) Genome Biol , vol.7 , pp. 11
    • ARKIN, A.P.1    FLETCHER, D.A.2
  • 8
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • BENJAMINI, Y. AND HOCHBERG, Y. 1995. Controlling the false discovery rate: A practical and powerful approach to multiple testing. JR. Stat. Soc. B 57, 289-300.
    • (1995) JR. Stat. Soc. B , vol.57 , pp. 289-300
    • BENJAMINI, Y.1    HOCHBERG, Y.2
  • 9
    • 33747813561 scopus 로고    scopus 로고
    • The inferelator: An algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo
    • BONNEAU, R., REISS, D., SHANNON, P., FACCIOTTI, M., HOOD, L., BALIGA, N., ANDTHORSSON, V. 2006. The inferelator: An algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo. Genome Biol. 7, 5, R36.
    • (2006) Genome Biol , vol.7 , Issue.5
    • BONNEAU, R.1    REISS, D.2    SHANNON, P.3    FACCIOTTI, M.4    HOOD, L.5    BALIGA, N.6    ANDTHORSSON, V.7
  • 11
    • 84984932472 scopus 로고    scopus 로고
    • Exploring the new world of the genome with DNA microarrays
    • BROWN, P. AND BOTSTEIN, D. 1999. Exploring the new world of the genome with DNA microarrays. Nat. Genet. 21, 1, 33-37.
    • (1999) Nat. Genet , vol.21 , Issue.1 , pp. 33-37
    • BROWN, P.1    BOTSTEIN, D.2
  • 12
    • 34548018092 scopus 로고    scopus 로고
    • BULLINGER, L., RÜCKER, F. G., KURZ, S., DU, J., SCHOLL, C., SANDER, S., CORBACIOGLU, A., LOTTAZ, C., KRAUTER, J., FRÖHLING, S., GANSER, A., SCHLENK, R. F., DÖHNER, K., POLLACK, J. R., AND DÖHNER, H. 2007. Gene-expression profiling identifies distinct subclasses of core binding factor acute myeloid leukemia. Blood 110, 4, 1291-1300.
    • BULLINGER, L., RÜCKER, F. G., KURZ, S., DU, J., SCHOLL, C., SANDER, S., CORBACIOGLU, A., LOTTAZ, C., KRAUTER, J., FRÖHLING, S., GANSER, A., SCHLENK, R. F., DÖHNER, K., POLLACK, J. R., AND DÖHNER, H. 2007. Gene-expression profiling identifies distinct subclasses of core binding factor acute myeloid leukemia. Blood 110, 4, 1291-1300.
  • 15
    • 0036900895 scopus 로고
    • Fundamentals of experimental design for cDNA microarrays
    • CHURCHILL, G. A. 1953. Fundamentals of experimental design for cDNA microarrays. Nature (Genetic Supplement) 32, 490-495.
    • (1953) Nature (Genetic Supplement) , vol.32 , pp. 490-495
    • CHURCHILL, G.A.1
  • 16
    • 0036119144 scopus 로고    scopus 로고
    • Immobilization of homooligonucleotide probe layers onto Si/SiO2 substrates: Characterization by electrochemical impedance measurements and radiolabelling
    • CLOAREC, J. P., DELIGIANIS, N., MARTIN, J. R., LAWRENCE, I., SOUTEYRAND, E., POLYCHRONAKOS, C., AND LAWRENCE, M. F. 2002. Immobilization of homooligonucleotide probe layers onto Si/SiO2 substrates: Characterization by electrochemical impedance measurements and radiolabelling. Biosens. Bioelectron. 17, 405-412.
    • (2002) Biosens. Bioelectron , vol.17 , pp. 405-412
    • CLOAREC, J.P.1    DELIGIANIS, N.2    MARTIN, J.R.3    LAWRENCE, I.4    SOUTEYRAND, E.5    POLYCHRONAKOS, C.6    LAWRENCE, M.F.7
  • 17
    • 0037432755 scopus 로고    scopus 로고
    • The human genome project: Lessons from large-scale biology
    • COLLINS, F. S., MORGAN, M., AND PATRINOS, A. 2003. The human genome project: Lessons from large-scale biology. Science 300, 5617, 286-290.
    • (2003) Science , vol.300 , Issue.5617 , pp. 286-290
    • COLLINS, F.S.1    MORGAN, M.2    PATRINOS, A.3
  • 18
    • 0032561249 scopus 로고    scopus 로고
    • COLLINS, F. S., PATRINOS, A., CHAKRAVARTI, E. J. A., GESTELAND, R., WALTERS, L., AND THE MEMBERS OF THE DOE AND NIH PLANNING GROUPS. 1998. New goals for the U.S. human genome project: 1998-2003. Science 282, 5389, 682-689.
    • COLLINS, F. S., PATRINOS, A., CHAKRAVARTI, E. J. A., GESTELAND, R., WALTERS, L., AND THE MEMBERS OF THE DOE AND NIH PLANNING GROUPS. 1998. New goals for the U.S. human genome project: 1998-2003. Science 282, 5389, 682-689.
  • 19
    • 0034887203 scopus 로고    scopus 로고
    • CONSORTIUM, T. G. O. 2001. Creating the gene ontology resource: Design and implementation. Genome Res. 11, 8, 1425-1433.
    • CONSORTIUM, T. G. O. 2001. Creating the gene ontology resource: Design and implementation. Genome Res. 11, 8, 1425-1433.
  • 20
    • 21444452397 scopus 로고    scopus 로고
    • DI BERNARDO1, D., THOMPSON, M. J., GARDNER, T. S., CHOBOT, S. E., EASTWOOD, E. L., WOJTOVICH, A. P., ELLIOTT, S. J., SCHAUS, S. E., AND COLLINS, J. J. 2005. Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks. Nat. Biotechnol. 23, 377-383.
    • DI BERNARDO1, D., THOMPSON, M. J., GARDNER, T. S., CHOBOT, S. E., EASTWOOD, E. L., WOJTOVICH, A. P., ELLIOTT, S. J., SCHAUS, S. E., AND COLLINS, J. J. 2005. Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks. Nat. Biotechnol. 23, 377-383.
  • 21
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • EISEN, M. B., SPELLMAN, P. T., BROWN, P. O., AND BOTSTEIN, D. 1998. Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. 95, 25, 14863-14868.
    • (1998) Proc. Natl. Acad. Sci , vol.95 , Issue.25 , pp. 14863-14868
    • EISEN, M.B.1    SPELLMAN, P.T.2    BROWN, P.O.3    BOTSTEIN, D.4
  • 22
    • 28544451327 scopus 로고    scopus 로고
    • Fundations for engineering biology
    • ENDY, D. 2005. Fundations for engineering biology. Nature 438, 24, 449-453.
    • (2005) Nature , vol.438 , Issue.24 , pp. 449-453
    • ENDY, D.1
  • 23
    • 33745602221 scopus 로고    scopus 로고
    • The necessity of a human epigenome project
    • ESTELLER, M. 2006. The necessity of a human epigenome project. Carcinogenesis 27, 1121-1125.
    • (2006) Carcinogenesis , vol.27 , pp. 1121-1125
    • ESTELLER, M.1
  • 24
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in caenorhabditis elegans
    • FIRE, A., XU, S., MONTGOMERY, M., KOSTAS, S., AND ANC C. MELLO, S. D. 1998. Potent and specific genetic interference by double-stranded RNA in caenorhabditis elegans. Nature 391, 6669, 806-811.
    • (1998) Nature , vol.391 , Issue.6669 , pp. 806-811
    • FIRE, A.1    XU, S.2    MONTGOMERY, M.3    KOSTAS, S.4    ANC, C.5    MELLO, S.D.6
  • 25
    • 2442668010 scopus 로고    scopus 로고
    • Thin film micro arrays with immobilized DNA for hybridization analysis
    • FIXE, F., CHU, V., PRAZERES, D. M. F., AND CONDE, J. P. 2004. Thin film micro arrays with immobilized DNA for hybridization analysis. Anal. Chem. 32, 9, e70.
    • (2004) Anal. Chem , vol.32 , Issue.9
    • FIXE, F.1    CHU, V.2    PRAZERES, D.M.F.3    CONDE, J.P.4
  • 26
    • 0035988622 scopus 로고    scopus 로고
    • FORTINA. 2002. Molecular diagnostics: hurdles for clinical implementation. Trend Molec. Medicine 8,6, 264-266.
    • FORTINA. 2002. Molecular diagnostics: hurdles for clinical implementation. Trend Molec. Medicine 8,6, 264-266.
  • 27
    • 33646884801 scopus 로고    scopus 로고
    • Reconstruction of functional human gene network, with an application for prioritizing positional candidate genes
    • FRANKE, L., VAN BAKEL, H., FOKKENS, L., DE JONG, E. D., PETERSEN, M.-E., AND WIJMENGA, C. 2006. Reconstruction of functional human gene network, with an application for prioritizing positional candidate genes. Amer. J. Hum. Genetics 78, 6, 1011-1025.
    • (2006) Amer. J. Hum. Genetics , vol.78 , Issue.6 , pp. 1011-1025
    • FRANKE, L.1    VAN BAKEL, H.2    FOKKENS, L.3    DE JONG, E.D.4    PETERSEN, M.-E.5    WIJMENGA, C.6
  • 30
    • 0036643808 scopus 로고    scopus 로고
    • PDMS-based microfluidic devices for biomedical applications
    • FUJII, T. 2002. PDMS-based microfluidic devices for biomedical applications. Microelectron. Engin. 61-62, 907-914.
    • (2002) Microelectron. Engin , vol.61-62 , pp. 907-914
    • FUJII, T.1
  • 31
    • 0038048325 scopus 로고    scopus 로고
    • Inferring genetic networks and identifying compound mode of action via expression profiling
    • GARDNER, T. S., DI BERNARDO, D., LORENZ, D., AND COLLINS, J. J. 2003. Inferring genetic networks and identifying compound mode of action via expression profiling. Science 301, 5629, 102-105.
    • (2003) Science , vol.301 , Issue.5629 , pp. 102-105
    • GARDNER, T.S.1    DI BERNARDO, D.2    LORENZ, D.3    COLLINS, J.J.4
  • 32
    • 0034607310 scopus 로고    scopus 로고
    • Quantitative measurements and modeling of kinetics in nucleic acid monolayer films using spr spectroscopy
    • GEORGIADIS, R., PETERLINZ, K. P., AND PETERSON, A. W. 2000. Quantitative measurements and modeling of kinetics in nucleic acid monolayer films using spr spectroscopy. J. Amer. Chem. Soc. 122, 3166-3173.
    • (2000) J. Amer. Chem. Soc , vol.122 , pp. 3166-3173
    • GEORGIADIS, R.1    PETERLINZ, K.P.2    PETERSON, A.W.3
  • 33
    • 0034710876 scopus 로고    scopus 로고
    • Coupled two-way clustering analysis of gene microarray data
    • GETZ, G., LEVINE, E., AND DOMANY, E. 2000. Coupled two-way clustering analysis of gene microarray data. Proc. Natl. Acad. Sci. 97, 22, 12079-12084.
    • (2000) Proc. Natl. Acad. Sci , vol.97 , Issue.22 , pp. 12079-12084
    • GETZ, G.1    LEVINE, E.2    DOMANY, E.3
  • 36
    • 0029883621 scopus 로고    scopus 로고
    • Detection and localization of individual antibody-antigen recognition events by atomic force microscopy
    • HINTERDORFER, P., BAUMGARTNER, W., GRUBER, H. J., SCHILCHER, K., AND SCHINDLER, H. 1996. Detection and localization of individual antibody-antigen recognition events by atomic force microscopy. Proc. Natl. Acad. Sci. 93, 8, 3477-3481.
    • (1996) Proc. Natl. Acad. Sci , vol.93 , Issue.8 , pp. 3477-3481
    • HINTERDORFER, P.1    BAUMGARTNER, W.2    GRUBER, H.J.3    SCHILCHER, K.4    SCHINDLER, H.5
  • 37
    • 28844453213 scopus 로고    scopus 로고
    • Where are we in genomics?
    • HOCQUETTE, J. F. 2005. Where are we in genomics? J. Physiol. Pharmacol. 56, 3, 37-70.
    • (2005) J. Physiol. Pharmacol , vol.56 , Issue.3 , pp. 37-70
    • HOCQUETTE, J.F.1
  • 38
    • 0031251661 scopus 로고    scopus 로고
    • Impedance spectroscopy of self-assembled monolayers on Au(111): Evidence for complex doublelayer structure in aqueous NaC104 at the potential of zero charge
    • JANEK, R. P., FAWCETT, W. R., AND ULMAN, A. 1997. Impedance spectroscopy of self-assembled monolayers on Au(111): Evidence for complex doublelayer structure in aqueous NaC104 at the potential of zero charge. J. Phys. Chem. B 101, 8550-8558.
    • (1997) J. Phys. Chem. B , vol.101 , pp. 8550-8558
    • JANEK, R.P.1    FAWCETT, W.R.2    ULMAN, A.3
  • 39
    • 0032040253 scopus 로고    scopus 로고
    • Microminiaturized immunoassays using atomic force microscopy and compisitionally patterned antigen arrays
    • JONES, V. W., KENSETH, J. R., PORTER, M. D., MOSHER, C. L., AND HENDERSON, E. 1998. Microminiaturized immunoassays using atomic force microscopy and compisitionally patterned antigen arrays. Anal Chem 70, 1233-1241.
    • (1998) Anal Chem , vol.70 , pp. 1233-1241
    • JONES, V.W.1    KENSETH, J.R.2    PORTER, M.D.3    MOSHER, C.L.4    HENDERSON, E.5
  • 40
    • 0142072519 scopus 로고    scopus 로고
    • Integrated hydrogenated amorphous si photodiode detector for microfluidic bioanalytical devices
    • KAMEI, T., PAEGEL, B. M., SCHERER, J. R., STREET, A. M. S. R. A., AND MATHIES, R. A. 2003. Integrated hydrogenated amorphous si photodiode detector for microfluidic bioanalytical devices. Anal. Chem. 75, 20, 5300-5305.
    • (2003) Anal. Chem , vol.75 , Issue.20 , pp. 5300-5305
    • KAMEI, T.1    PAEGEL, B.M.2    SCHERER, J.R.3    STREET, A.M.S.R.A.4    MATHIES, R.A.5
  • 41
    • 0037446780 scopus 로고    scopus 로고
    • Thermal bonding of polymeric capillary electrophoresis microdevices in water
    • KELLY, T. R. AND WOLLEY, A. T. 2003. Thermal bonding of polymeric capillary electrophoresis microdevices in water. Anal. Chem. 75, 8, 1941-1945.
    • (2003) Anal. Chem , vol.75 , Issue.8 , pp. 1941-1945
    • KELLY, T.R.1    WOLLEY, A.T.2
  • 42
    • 0035253329 scopus 로고    scopus 로고
    • Single-molecule DNA amplification and analysis in an integrated microfluidic device
    • LAGALLY, E. T., MEDINTZ, I., AND MATHIES, R. A. 2001. Single-molecule DNA amplification and analysis in an integrated microfluidic device. Anal. Chem. 73, 565-570.
    • (2001) Anal. Chem , vol.73 , pp. 565-570
    • LAGALLY, E.T.1    MEDINTZ, I.2    MATHIES, R.A.3
  • 44
    • 9144251970 scopus 로고    scopus 로고
    • LAPOINTE, J., LI, C., HIGGINS, J. P., VAN DE RUN, M., BAIR, E., MONTGOMERY, K., FERRARI, M., EGEVAD, L., RAYFORD, W., BERGERHEIM, U., EKMAN, P., DEMARZO, A. M., TIBSHIRANI, R., BOTSTEIN, D., BROWN, P. O., BROOKS, J. D., AND POLLACK, J. R. 2004. Gene expression profiling identifies clinically relevant subtypes of prostate cancer. Proc. Natl. Acad. Sci. 101, 3, 811-816.
    • LAPOINTE, J., LI, C., HIGGINS, J. P., VAN DE RUN, M., BAIR, E., MONTGOMERY, K., FERRARI, M., EGEVAD, L., RAYFORD, W., BERGERHEIM, U., EKMAN, P., DEMARZO, A. M., TIBSHIRANI, R., BOTSTEIN, D., BROWN, P. O., BROOKS, J. D., AND POLLACK, J. R. 2004. Gene expression profiling identifies clinically relevant subtypes of prostate cancer. Proc. Natl. Acad. Sci. 101, 3, 811-816.
  • 45
    • 42149176859 scopus 로고    scopus 로고
    • Moving smaller in drug discovery and delivery
    • LAVAN, D., LYNN, D., AND LANGER, R. 2001. Moving smaller in drug discovery and delivery. Nat. Rev. 1, 11.
    • (2001) Nat. Rev , vol.1 , pp. 11
    • LAVAN, D.1    LYNN, D.2    LANGER, R.3
  • 46
    • 27944474776 scopus 로고    scopus 로고
    • ErmineJ: Tool for functional analysis of gene expression data sets
    • doi:10.1186/1471- 2105-6-269
    • LEE, H. K., BRAYNEN, W., KESHAV, K., AND PAVLIDIS, P. 2005. ErmineJ: Tool for functional analysis of gene expression data sets. BMC Bioinform. 6, 269, doi:10.1186/1471- 2105-6-269.
    • (2005) BMC Bioinform , vol.6 , pp. 269
    • LEE, H.K.1    BRAYNEN, W.2    KESHAV, K.3    PAVLIDIS, P.4
  • 47
    • 0021919480 scopus 로고
    • Rapid and sensitive protein similarity searches
    • LIPMAN, D. AND PEARSON, W. 1985. Rapid and sensitive protein similarity searches. Science 227, 4693, 1435-1441.
    • (1985) Science , vol.227 , Issue.4693 , pp. 1435-1441
    • LIPMAN, D.1    PEARSON, W.2
  • 48
    • 1842477059 scopus 로고    scopus 로고
    • Self-contained, fully integrated biochip for sample preparation, polymerase chain reaction amplification, and DNA microarray detection
    • LIU, R. H., YANG, J., LENIGK, R., BONANNO, J., AND GRODZINSKI, P. 2004. Self-contained, fully integrated biochip for sample preparation, polymerase chain reaction amplification, and DNA microarray detection. Anal. Chem. 76, 1824-1831.
    • (2004) Anal. Chem , vol.76 , pp. 1824-1831
    • LIU, R.H.1    YANG, J.2    LENIGK, R.3    BONANNO, J.4    GRODZINSKI, P.5
  • 50
    • 38849203273 scopus 로고    scopus 로고
    • TOM: Enhancement and extension of a tool suite for in silico approaches to multigenic complex disorders
    • To appear
    • MASOTTI, D., NARDINI, C., ROSSI, S., BONORA, E., ROMEO, G., VOLINIA, S., AND BENINI, L. 2007. TOM: enhancement and extension of a tool suite for in silico approaches to multigenic complex disorders. Bioinform. To appear.
    • (2007) Bioinform
    • MASOTTI, D.1    NARDINI, C.2    ROSSI, S.3    BONORA, E.4    ROMEO, G.5    VOLINIA, S.6    BENINI, L.7
  • 51
    • 0008261096 scopus 로고
    • A new method for sequencing DNA
    • MAXAM, A. M. AND GILBERT, W. 1977. A new method for sequencing DNA. Proc. Natl. Acad. Sci. 74, 2, 560-564.
    • (1977) Proc. Natl. Acad. Sci , vol.74 , Issue.2 , pp. 560-564
    • MAXAM, A.M.1    GILBERT, W.2
  • 52
    • 0035478125 scopus 로고    scopus 로고
    • Surface plasmon resonance: Towards an understanding of the mechanisms of biological molecular recognition monolayer films using SPR spectroscopy
    • MCDONNELL, J. M. 2001. Surface plasmon resonance: towards an understanding of the mechanisms of biological molecular recognition monolayer films using SPR spectroscopy. Curr. Opin. Chem. Biol. 5, 5, 572-577.
    • (2001) Curr. Opin. Chem. Biol , vol.5 , Issue.5 , pp. 572-577
    • MCDONNELL, J.M.1
  • 53
    • 1442275388 scopus 로고    scopus 로고
    • A monolithic silicon optoelectronic transducer as a real-time affinity biosensor
    • MISIAKOS, K., KAKABAKOS, S. E., PETROU, P. S., AND RUF, H. 2004. A monolithic silicon optoelectronic transducer as a real-time affinity biosensor. Sens, and Act. B 76, 5, 1366-1373.
    • (2004) Sens, and Act. B , vol.76 , Issue.5 , pp. 1366-1373
    • MISIAKOS, K.1    KAKABAKOS, S.E.2    PETROU, P.S.3    RUF, H.4
  • 54
    • 0038054341 scopus 로고    scopus 로고
    • MOOTHA, V. K., LINDGREN, C. M., ERIKSSON, K.-F., SUBRAMANIAN, A., SIHAG, S., LEHAR, J., PUIGSERVER, P., CARLSSON, E., RIDDERSTRÅLE, M., LAURILA, E., HOUSTIS, N., DALY, M. J., PATTERSON, N., MESIROV, J. P., GOLUB, T. R., TAMAYO, P., SPIEGELMAN, B., LANDER, E. S., HIRSCHHORN, J. N., ALTSHULER, D., AND GROOP, L. C. 2003. PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nat. Genet. 34, 3, 267-273.
    • MOOTHA, V. K., LINDGREN, C. M., ERIKSSON, K.-F., SUBRAMANIAN, A., SIHAG, S., LEHAR, J., PUIGSERVER, P., CARLSSON, E., RIDDERSTRÅLE, M., LAURILA, E., HOUSTIS, N., DALY, M. J., PATTERSON, N., MESIROV, J. P., GOLUB, T. R., TAMAYO, P., SPIEGELMAN, B., LANDER, E. S., HIRSCHHORN, J. N., ALTSHULER, D., AND GROOP, L. C. 2003. PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nat. Genet. 34, 3, 267-273.
  • 55
    • 42149191432 scopus 로고    scopus 로고
    • The first polymerase chain reaction
    • MULLIS, K. B. 2003. The first polymerase chain reaction. Scientist 17, 4, 11.
    • (2003) Scientist , vol.17 , Issue.4 , pp. 11
    • MULLIS, K.B.1
  • 56
    • 0035144335 scopus 로고    scopus 로고
    • Fabrication of quartz microchips with optical slit and development of a linear imaging uv detector for microchip eletrophoresis systems
    • NAKANISHI, H., NISHIMOTO, T., ARAI, A., ABE, H., KANAI, M., FUJIYAMA, Y., AND YOSHIDA, T. 2001. Fabrication of quartz microchips with optical slit and development of a linear imaging uv detector for microchip eletrophoresis systems. Anal. Chem. 22, 2, 230-234.
    • (2001) Anal. Chem , vol.22 , Issue.2 , pp. 230-234
    • NAKANISHI, H.1    NISHIMOTO, T.2    ARAI, A.3    ABE, H.4    KANAI, M.5    FUJIYAMA, Y.6    YOSHIDA, T.7
  • 57
    • 0036146456 scopus 로고    scopus 로고
    • Electrochemical oxidation mechanism of guanine and adenine using a glassy carbon microelectrode
    • OLIVEIRA-BRETT, A. M., DICULESCU, V., AND PIEDADE, J. 2002. Electrochemical oxidation mechanism of guanine and adenine using a glassy carbon microelectrode. Bioelectrochem. 55, 61-62.
    • (2002) Bioelectrochem , vol.55 , pp. 61-62
    • OLIVEIRA-BRETT, A.M.1    DICULESCU, V.2    PIEDADE, J.3
  • 58
    • 0742288080 scopus 로고    scopus 로고
    • RNA interference and mRNA silencing, 2004: How far will they reach?
    • PEDERSON, T. 2004. RNA interference and mRNA silencing, 2004: How far will they reach? Molec. Biol. Cell 15, 2, 407-410.
    • (2004) Molec. Biol. Cell , vol.15 , Issue.2 , pp. 407-410
    • PEDERSON, T.1
  • 59
    • 0042375181 scopus 로고    scopus 로고
    • In situ kinetics of self-assembly by surface plasmon resonance spectroscopy
    • PETERLINZ, K. AND GEORGIADIS, R. 1996. In situ kinetics of self-assembly by surface plasmon resonance spectroscopy. Langmuir 12, 4731-4740.
    • (1996) Langmuir , vol.12 , pp. 4731-4740
    • PETERLINZ, K.1    GEORGIADIS, R.2
  • 60
    • 0037090917 scopus 로고    scopus 로고
    • How to make a DNA
    • PIRRUNG, M. C. 2002. How to make a DNA. Angew. Chem. Int. Ed. 41, 1276-1289.
    • (2002) Angew. Chem. Int. Ed , vol.41 , pp. 1276-1289
    • PIRRUNG, M.C.1
  • 61
    • 1642588352 scopus 로고    scopus 로고
    • Dna detection on transistor arrays following mutation specific enzymatic amplification
    • POUTHAS, F., GENTIL, C., COTE, D., AND BOCKELMANN, U. 2004. Dna detection on transistor arrays following mutation specific enzymatic amplification. Appl. Phys. Lett. 84, 1594-1596.
    • (2004) Appl. Phys. Lett , vol.84 , pp. 1594-1596
    • POUTHAS, F.1    GENTIL, C.2    COTE, D.3    BOCKELMANN, U.4
  • 62
    • 33846057724 scopus 로고    scopus 로고
    • NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
    • PRUITT, K. D., TATUSOVA, T., AND MAGLOTT, D. R. 2007. NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res. 35, D61-D65.
    • (2007) Nucleic Acids Res , vol.35
    • PRUITT, K.D.1    TATUSOVA, T.2    MAGLOTT, D.R.3
  • 63
    • 0035375137 scopus 로고    scopus 로고
    • Computationa analysis of micorarray data
    • QUACKENBUSH, J. 2001. Computationa analysis of micorarray data. Nat Rev Genet 2, 6, 418-427.
    • (2001) Nat Rev Genet , vol.2 , Issue.6 , pp. 418-427
    • QUACKENBUSH, J.1
  • 64
    • 34249752597 scopus 로고    scopus 로고
    • Extracting biology from high-dimensional biological data
    • QUACKENBUSH, J. 2007. Extracting biology from high-dimensional biological data. J. Exp. Biol. 210, 1507-1517.
    • (2007) J. Exp. Biol , vol.210 , pp. 1507-1517
    • QUACKENBUSH, J.1
  • 65
    • 0037226593 scopus 로고    scopus 로고
    • A molecular signature of metastasis in primary solid tumors
    • RAMASWAMY, S., ROSS, K. N., LANDER, E. S., AND GOLUB, T. R. 2003. A molecular signature of metastasis in primary solid tumors. Nat. Genet. 33, 1, 49-54.
    • (2003) Nat. Genet , vol.33 , Issue.1 , pp. 49-54
    • RAMASWAMY, S.1    ROSS, K.N.2    LANDER, E.S.3    GOLUB, T.R.4
  • 66
  • 67
    • 84883838178 scopus 로고    scopus 로고
    • ROMUALDI, C., TREVISAN, S., CELEGATO, B., COSTA, G., AND LANFRANCHI, G. 2003. Improved detection of differentially expressed genes in micro array experiments through multiple scanning and image integration. Nucleic Acid Res. 31, 23, e149-1-e149-8.
    • ROMUALDI, C., TREVISAN, S., CELEGATO, B., COSTA, G., AND LANFRANCHI, G. 2003. Improved detection of differentially expressed genes in micro array experiments through multiple scanning and image integration. Nucleic Acid Res. 31, 23, e149-1-e149-8.
  • 68
    • 0035153070 scopus 로고    scopus 로고
    • Pyrosequencing sheds light on DNA sequencing
    • RONAGHI, M. 2001. Pyrosequencing sheds light on DNA sequencing. Genome Res. 11, 1, 3-11.
    • (2001) Genome Res , vol.11 , Issue.1 , pp. 3-11
    • RONAGHI, M.1
  • 69
    • 33747814487 scopus 로고    scopus 로고
    • TOM: A web-based integrated approach for efficient identification of candidate disease genes
    • doi:10.1093/nar/gkl340
    • ROSSI, S., MASOTTI, D., NARDINI, C., BONORA, E., ROMEO, G., MACH, E., BENINI, L., AND VOLINIA, S. 2006. TOM: a web-based integrated approach for efficient identification of candidate disease genes. Nucleic Acids Res. 34, doi:10.1093/nar/gkl340, W285-W292.
    • (2006) Nucleic Acids Res. 34
    • ROSSI, S.1    MASOTTI, D.2    NARDINI, C.3    BONORA, E.4    ROMEO, G.5    MACH, E.6    BENINI, L.7    VOLINIA, S.8
  • 71
    • 0016800090 scopus 로고
    • A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase
    • SANGER, F. AND COULSON, A. R. 1975. A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase. J. Molec. Biol. 94, 3, 441-448.
    • (1975) J. Molec. Biol , vol.94 , Issue.3 , pp. 441-448
    • SANGER, F.1    COULSON, A.R.2
  • 72
    • 34250303137 scopus 로고    scopus 로고
    • Origin of bistability in the lac operon
    • SANTILLÁN, M., MACKEY, M. C., AND ZERON, E. S. 2007. Origin of bistability in the lac operon. Biophys. J. 92, 3830-3842.
    • (2007) Biophys. J , vol.92 , pp. 3830-3842
    • SANTILLÁN, M.1    MACKEY, M.C.2    ZERON, E.S.3
  • 73
    • 36348982664 scopus 로고    scopus 로고
    • Biodiversity informatics: Organizing and linking information across the spectrum of life
    • To appear
    • SARKAR, I. N. 2007. Biodiversity informatics: Organizing and linking information across the spectrum of life. Brief Bioinform., To appear.
    • (2007) Brief Bioinform
    • SARKAR, I.N.1
  • 76
    • 0037941585 scopus 로고    scopus 로고
    • Module networks, identifying regulatory modules and their condition-specific regulators from gene expression data
    • SEGAL, E., SHAPIRA, M., REGEV, A., PE'ER, D., BOTSTEIN, D., KOLLER, D., AND FRIEDMAN, N. 2003. Module networks, identifying regulatory modules and their condition-specific regulators from gene expression data. Nat. Genet. 34, 2, 166-176.
    • (2003) Nat. Genet , vol.34 , Issue.2 , pp. 166-176
    • SEGAL, E.1    SHAPIRA, M.2    REGEV, A.3    PE'ER, D.4    BOTSTEIN, D.5    KOLLER, D.6    FRIEDMAN, N.7
  • 79
    • 42149172814 scopus 로고    scopus 로고
    • A cytogeneticists perspective on genomic microarrays
    • SHAFFER, L. G. AND BEJJANI, B. A. 2006. A cytogeneticists perspective on genomic microarrays. Hum. Reprod. 15, 1, R57-R66.
    • (2006) Hum. Reprod , vol.15 , Issue.1
    • SHAFFER, L.G.1    BEJJANI, B.A.2
  • 80
    • 0033485646 scopus 로고    scopus 로고
    • Microfabricated capillary electrophoresis amino acid chirality analyzer for extraterrestrial exploration
    • SHI, Y., SIMPSON, P. C., SCHERER, J. R., WEXLER, D., SKIBOLA, C., SMITH, M. T., AND MATHIES, R. A. 1999. Microfabricated capillary electrophoresis amino acid chirality analyzer for extraterrestrial exploration. Anal. Chem. 71, 5354-5361.
    • (1999) Anal. Chem , vol.71 , pp. 5354-5361
    • SHI, Y.1    SIMPSON, P.C.2    SCHERER, J.R.3    WEXLER, D.4    SKIBOLA, C.5    SMITH, M.T.6    MATHIES, R.A.7
  • 81
    • 0036772705 scopus 로고    scopus 로고
    • Gene perturbation and intervention in probabilistic boolean networks
    • SHMULEVICH, I., DOUGHERTY, E. R., AND ZHANG, W. 2002. Gene perturbation and intervention in probabilistic boolean networks. Bioinform. 18, 10, R57-R66.
    • (2002) Bioinform , vol.18 , Issue.10
    • SHMULEVICH, I.1    DOUGHERTY, E.R.2    ZHANG, W.3
  • 82
    • 0031751340 scopus 로고    scopus 로고
    • Mass-sensing, multianalyte microarray immunoassay with imaging detection
    • SILZEL, J. W., CERCEK, B., DODSON, C., TSAY, T., AND OBREMSKI, R. J. 1998. Mass-sensing, multianalyte microarray immunoassay with imaging detection. Clinical Chem 44, 2036-2043.
    • (1998) Clinical Chem , vol.44 , pp. 2036-2043
    • SILZEL, J.W.1    CERCEK, B.2    DODSON, C.3    TSAY, T.4    OBREMSKI, R.J.5
  • 85
    • 42149101683 scopus 로고    scopus 로고
    • STAGNI. C., GUIDUCCI, C., RICCÓ, B., CARRARA,S., ANDM. SCHIENLE,C. P., ANDTHEWES, R. 2006. Fully-electronic label-free DNA sensor chip. IEEE Trans. Circ. Syst. I.
    • STAGNI. C., GUIDUCCI, C., RICCÓ, B., CARRARA,S., ANDM. SCHIENLE,C. P., ANDTHEWES, R. 2006. Fully-electronic label-free DNA sensor chip. IEEE Trans. Circ. Syst. I.
  • 86
    • 0042424602 scopus 로고    scopus 로고
    • Statistical significance for genomewide studies
    • PNAS, 16
    • STOREY, J. D. AND TIBSHIRANI, R. 2003. Statistical significance for genomewide studies. Proc. Not. Acod, Sci. (PNAS) 10, 16, 9440-9445.
    • (2003) Proc. Not. Acod, Sci , vol.10 , pp. 9440-9445
    • STOREY, J.D.1    TIBSHIRANI, R.2
  • 89
    • 0032030750 scopus 로고    scopus 로고
    • Cutting out the middleman: DNA biosensors based on electrochemical oxidation
    • THORP, H. H. 1998. Cutting out the middleman: DNA biosensors based on electrochemical oxidation. Trends Biotechn. 16, 117-121.
    • (1998) Trends Biotechn , vol.16 , pp. 117-121
    • THORP, H.H.1
  • 93
    • 15044341082 scopus 로고    scopus 로고
    • Integration of text- and data-mining using ontologies successfully selects disease gene candidates
    • TIFFIN, N., KELSO, J. F., POWELL, A. R., PAN, H., BAJIC, V. B., AND HIDE, W. A. 2005. Integration of text- and data-mining using ontologies successfully selects disease gene candidates. Nucleic Acids Res. 33, 5, 1544-1552.
    • (2005) Nucleic Acids Res , vol.33 , Issue.5 , pp. 1544-1552
    • TIFFIN, N.1    KELSO, J.F.2    POWELL, A.R.3    PAN, H.4    BAJIC, V.B.5    HIDE, W.A.6
  • 94
    • 1542787787 scopus 로고    scopus 로고
    • POCUS: Mining genomic sequence annotation to predict disease genes
    • TURNER, F., CLUTTERBUCK, D., AND SEMPLE, C. 2003. POCUS: mining genomic sequence annotation to predict disease genes. Genome Biol 4, 11, R75.
    • (2003) Genome Biol , vol.4 , Issue.11
    • TURNER, F.1    CLUTTERBUCK, D.2    SEMPLE, C.3
  • 95
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • TUSHER, V. G., TIBSHIRANI, R., AND CHU, G. 2001. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. 98, 9, 5116-5121.
    • (2001) Proc. Natl. Acad. Sci , vol.98 , Issue.9 , pp. 5116-5121
    • TUSHER, V.G.1    TIBSHIRANI, R.2    CHU, G.3
  • 97
    • 2442612637 scopus 로고    scopus 로고
    • Label-free fully electronic nucleic acid detection system based on a field-effect transistor device
    • USLU, F., INGEBRANDT, S., MAYER, D., BCKER-MEFFERT, S., ODENTHAL, M., AND OFFENHUSSER, A. 2004. Label-free fully electronic nucleic acid detection system based on a field-effect transistor device. Biosen. Bioelectron. 19, 12, 1723-1731.
    • (2004) Biosen. Bioelectron , vol.19 , Issue.12 , pp. 1723-1731
    • USLU, F.1    INGEBRANDT, S.2    MAYER, D.3    BCKER-MEFFERT, S.4    ODENTHAL, M.5    OFFENHUSSER, A.6
  • 98
    • 0036372484 scopus 로고    scopus 로고
    • WANG, H., WANG, W., AND ANS P.S.YU, J. Y. 2002. Clustering by pattern similarity in large data sets. In Proceedings of ACM SIGMOD.
    • WANG, H., WANG, W., AND ANS P.S.YU, J. Y. 2002. Clustering by pattern similarity in large data sets. In Proceedings of ACM SIGMOD.
  • 99
    • 33749048664 scopus 로고
    • Genetical implications of the structure of deoxyribonucleic acid
    • WATSON, J. D. AND CRICK, F. H. C. 1953a. Genetical implications of the structure of deoxyribonucleic acid. Nature 171, 964-967.
    • (1953) Nature , vol.171 , pp. 964-967
    • WATSON, J.D.1    CRICK, F.H.C.2
  • 100
    • 0038497542 scopus 로고
    • Molecular structure of nucleic acids: A structure for deoxyribose nucleic acid
    • WATSON, J. D. AND CRICK, F. H. C. 1953b. Molecular structure of nucleic acids: A structure for deoxyribose nucleic acid. Nature 17, 737-738.
    • (1953) Nature , vol.17 , pp. 737-738
    • WATSON, J.D.1    CRICK, F.H.C.2
  • 101
    • 0035298778 scopus 로고    scopus 로고
    • Monolithic capillary electrophoresis device with integrated fluorescence detector
    • WEBSTER, J. R., BURKE, M. A. B. D. T., AND MASTRANGELO, C. H. 2001. Monolithic capillary electrophoresis device with integrated fluorescence detector. Anal. Chem. 73, 1, 1622-1626.
    • (2001) Anal. Chem , vol.73 , Issue.1 , pp. 1622-1626
    • WEBSTER, J.R.1    BURKE, M.A.B.D.T.2    MASTRANGELO, C.H.3
  • 102
    • 33745145845 scopus 로고    scopus 로고
    • Embracing the complexity of genomic data for personalized medicine
    • WEST, M., GINSBURG, G. S., HUANG, A. T., AND NEVTNS, J. R. 2006. Embracing the complexity of genomic data for personalized medicine. Genome Res. 16, 559-566.
    • (2006) Genome Res , vol.16 , pp. 559-566
    • WEST, M.1    GINSBURG, G.S.2    HUANG, A.T.3    NEVTNS, J.R.4
  • 103
    • 0036532264 scopus 로고    scopus 로고
    • Amplified detection of single-base mismatches in DNA using microgravimetric quartz-crystal-microbalance transduction
    • WILLNER, I., PATOLSKY, F., WEIZMANN, Y., AND WILLNER, B. 2002. Amplified detection of single-base mismatches in DNA using microgravimetric quartz-crystal-microbalance transduction. Talanta 56, 847-856.
    • (2002) Talanta , vol.56 , pp. 847-856
    • WILLNER, I.1    PATOLSKY, F.2    WEIZMANN, Y.3    WILLNER, B.4
  • 104
    • 4244166752 scopus 로고    scopus 로고
    • High-speed dna genotyping using microfabricated capillary array electrophoresis chips
    • WOOLLEY, A. T., SENSABAUGH, G. F., AND MATHIES, R. A. 1997. High-speed dna genotyping using microfabricated capillary array electrophoresis chips. Anal. Chem. 69, 2181-2186.
    • (1997) Anal. Chem , vol.69 , pp. 2181-2186
    • WOOLLEY, A.T.1    SENSABAUGH, G.F.2    MATHIES, R.A.3
  • 105
    • 0034874270 scopus 로고    scopus 로고
    • Bioassay of prostate-specific antigen (PSA) using microcantilevers
    • WU, G., RAM, D., HANSEN, K., THUNDAT, T., AND MAJUMDAR, R. J. C. A. 2001. Bioassay of prostate-specific antigen (PSA) using microcantilevers. Nature Biotechn. 19, 856-860.
    • (2001) Nature Biotechn , vol.19 , pp. 856-860
    • WU, G.1    RAM, D.2    HANSEN, K.3    THUNDAT, T.4    MAJUMDAR, R.J.C.A.5
  • 106
    • 17644387185 scopus 로고    scopus 로고
    • A CMOS-compatible DNA microarray using optical detection together with a highly sensitive nanometallic particle protocol
    • XU, C., LI, J., WANG, Y., CHENG, L., LU, Z., AND CHAN, M. 2005. A CMOS-compatible DNA microarray using optical detection together with a highly sensitive nanometallic particle protocol. IEEE Electron. Device Lett. 26, 4, 240-242.
    • (2005) IEEE Electron. Device Lett , vol.26 , Issue.4 , pp. 240-242
    • XU, C.1    LI, J.2    WANG, Y.3    CHENG, L.4    LU, Z.5    CHAN, M.6
  • 107
    • 36949015400 scopus 로고    scopus 로고
    • Automated design of pin-constrained digital microfluidic biochips under droplet-interference constraints
    • Article
    • XU, T., HWANG, W., SU, F., AND CHAKRABARTY, K. 2007. Automated design of pin-constrained digital microfluidic biochips under droplet-interference constraints. ACM J. Emerg. Techn. Comput. Syst. 3, Article 14.
    • (2007) ACM J. Emerg. Techn. Comput. Syst. 3 , pp. 14
    • XU, T.1    HWANG, W.2    SU, F.3    CHAKRABARTY, K.4
  • 108
    • 42149147575 scopus 로고    scopus 로고
    • Technologies and analysis methods for detecting gene expression by DNA microarrays
    • YOON, S. 2006. Technologies and analysis methods for detecting gene expression by DNA microarrays. IEEE Techno. Surv.
    • (2006) IEEE Techno. Surv
    • YOON, S.1
  • 110
    • 33747126827 scopus 로고    scopus 로고
    • YOON, S. AND DE MICHELI, G. 2006. Computational identification of micrornas and their targets. Birth Defect Res. (Part C) 78, 2, 118-128.
    • YOON, S. AND DE MICHELI, G. 2006. Computational identification of micrornas and their targets. Birth Defect Res. (Part C) 78, 2, 118-128.
  • 111
    • 27544510864 scopus 로고    scopus 로고
    • YOON, S., NARDINI, C., BENINI, L., AND DE MICHELI, G. 2005. Discovering coherent biclusters from gene expression data using zero-suppressed binary decision diagrams. IEEE/ACM Transa. Computati. Biolo. Bioinform. 2, 3.
    • YOON, S., NARDINI, C., BENINI, L., AND DE MICHELI, G. 2005. Discovering coherent biclusters from gene expression data using zero-suppressed binary decision diagrams. IEEE/ACM Transa. Computati. Biolo. Bioinform. 2, 3.
  • 112
    • 14644425712 scopus 로고    scopus 로고
    • YOU, L. 2004. Toward computational systems biology. Cell Biochem. Biophy. 40, 2, 167-184.
    • YOU, L. 2004. Toward computational systems biology. Cell Biochem. Biophy. 40, 2, 167-184.
  • 114
    • 0033768106 scopus 로고    scopus 로고
    • Analysis of yeast protein kinases using protein chips
    • ZHU, H., KLEMIC, J. F. 2000. Analysis of yeast protein kinases using protein chips. Nature Genetics 26, 283-289.
    • (2000) Nature Genetics , vol.26 , pp. 283-289
    • ZHU, H.1    KLEMIC, J.F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.