-
1
-
-
13444301307
-
Mechanism and Control of V(D)J Recombination versus Class Switch Recombination: Similarities and Differences
-
Dudley DD, Chaudhuri J, Bassing CH, Alt FW. Mechanism and Control of V(D)J Recombination versus Class Switch Recombination: Similarities and Differences. Adv Immunol 2005; 86: 43-112.
-
(2005)
Adv Immunol
, vol.86
, pp. 43-112
-
-
Dudley, D.D.1
Chaudhuri, J.2
Bassing, C.H.3
Alt, F.W.4
-
2
-
-
0842303307
-
Unraveling V(D)J recombination; insights into gene regulation
-
Jung D, Alt FW. Unraveling V(D)J recombination; insights into gene regulation. Cell 2004; 116: 299-311.
-
(2004)
Cell
, vol.116
, pp. 299-311
-
-
Jung, D.1
Alt, F.W.2
-
3
-
-
0034094425
-
The RAG proteins and V(D)J recombination: Complexes, ends, and transposition
-
Fugmann SD, Lee AI, Shockett PE, Villey IJ, Schatz DG. The RAG proteins and V(D)J recombination: Complexes, ends, and transposition. Annu Rev Immunol 2000; 18: 495-527.
-
(2000)
Annu Rev Immunol
, vol.18
, pp. 495-527
-
-
Fugmann, S.D.1
Lee, A.I.2
Shockett, P.E.3
Villey, I.J.4
Schatz, D.G.5
-
4
-
-
16844381831
-
Mechanisms of B-cell lymphoma pathogenesis
-
Kuppers R. Mechanisms of B-cell lymphoma pathogenesis. Nat Rev Cancer 2005; 5: 251-262.
-
(2005)
Nat Rev Cancer
, vol.5
, pp. 251-262
-
-
Kuppers, R.1
-
5
-
-
0026721505
-
Chromosomal translocations in lymphoid malignancies reveal novel proto-oncogenes
-
Korsmeyer SJ. Chromosomal translocations in lymphoid malignancies reveal novel proto-oncogenes. Annu Rev Immunol 1992; 10: 785-807.
-
(1992)
Annu Rev Immunol
, vol.10
, pp. 785-807
-
-
Korsmeyer, S.J.1
-
6
-
-
0020680903
-
Translocation and rearragements of the c-myc oncogene locus in human undifferentiated B-cell lymphomas
-
Dalla-Favera R, Martinotti S, Gallo RC, Erikson J, Croce CM. Translocation and rearragements of the c-myc oncogene locus in human undifferentiated B-cell lymphomas. Science 1983; 219: 963-967.
-
(1983)
Science
, vol.219
, pp. 963-967
-
-
Dalla-Favera, R.1
Martinotti, S.2
Gallo, R.C.3
Erikson, J.4
Croce, C.M.5
-
7
-
-
0141720776
-
Restraining the V(D)J recombinase
-
Roth DB. Restraining the V(D)J recombinase. Nat Rev Immunol 2003; 3: 656-666.
-
(2003)
Nat Rev Immunol
, vol.3
, pp. 656-666
-
-
Roth, D.B.1
-
8
-
-
0037033440
-
V(D)J-mediated translocations in lymphoid neoplasms; a functional assessment of genomic instability by cryptic sites
-
Marculescu R, Le T, Simon P, Jaeger U, Nadel B. V(D)J-mediated translocations in lymphoid neoplasms; a functional assessment of genomic instability by cryptic sites. J Exp Med 2002; 195: 85-98.
-
(2002)
J Exp Med
, vol.195
, pp. 85-98
-
-
Marculescu, R.1
Le, T.2
Simon, P.3
Jaeger, U.4
Nadel, B.5
-
9
-
-
0035839959
-
Mechanisms of chromosomal translocations in B cell lymphomas
-
Kuppers R, Dalla-Favera R. Mechanisms of chromosomal translocations in B cell lymphomas. Oncogene 2001; 20: 5580-5594.
-
(2001)
Oncogene
, vol.20
, pp. 5580-5594
-
-
Kuppers, R.1
Dalla-Favera, R.2
-
10
-
-
0032478071
-
Frequent occurrence of deletions and duplications during somatic hypermutation: Implications for oncogene translocatiqns and heavy chain disease
-
Goossens T, Klein U, Kuppers R. Frequent occurrence of deletions and duplications during somatic hypermutation: Implications for oncogene translocatiqns and heavy chain disease. Proc Natl Acad Sci USA 1998; 95: 2463-2468.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 2463-2468
-
-
Goossens, T.1
Klein, U.2
Kuppers, R.3
-
11
-
-
0344541696
-
Genetic pathway to recurrent chromosome translocatipris in murine lymphoma involves V(D)J recombinase
-
Vanasse GJ, Halbrook J, Thomas S, Burgess A, Hoekstra MF, Disteche CM et al. Genetic pathway to recurrent chromosome translocatipris in murine lymphoma involves V(D)J recombinase. J Clin Invest 1999; 103: 1669-1675.
-
(1999)
J Clin Invest
, vol.103
, pp. 1669-1675
-
-
Vanasse, G.J.1
Halbrook, J.2
Thomas, S.3
Burgess, A.4
Hoekstra, M.F.5
Disteche, C.M.6
-
12
-
-
1942421722
-
RAG proteins shepherd double-strand breaks to a specific pathway, suppressing errorprone repair, but RAG nicking initiates homologous recombination
-
Lee GS, Neiditch MB, Salus SS, Roth DB. RAG proteins shepherd double-strand breaks to a specific pathway, suppressing errorprone repair, but RAG nicking initiates homologous recombination. Cell 2004; 117: 171-184.
-
(2004)
Cell
, vol.117
, pp. 171-184
-
-
Lee, G.S.1
Neiditch, M.B.2
Salus, S.S.3
Roth, D.B.4
-
13
-
-
1542287213
-
A non-B-DNA structure at the Bcl-2 major breakpoint region is cleaved by the RAG complex
-
Raghavah SC, Swanson PC, Wu X, Hsieh CL, Lieber MR. A non-B-DNA structure at the Bcl-2 major breakpoint region is cleaved by the RAG complex. Nature 2004; 428 88-93.
-
(2004)
Nature
, vol.428
, pp. 88-93
-
-
Raghavah, S.C.1
Swanson, P.C.2
Wu, X.3
Hsieh, C.L.4
Lieber, M.R.5
-
14
-
-
8544278955
-
Stability and strand asymmetry in the non-B DNA structure at the bcl-2 major breakpoint region
-
Raghavan SC, Houston S, Hegde BG, Langen R, Haworth IS, Lieber MR. Stability and strand asymmetry in the non-B DNA structure at the bcl-2 major breakpoint region. J Biol Chem 2004; 279: 46213-46225.
-
(2004)
J Biol Chem
, vol.279
, pp. 46213-46225
-
-
Raghavan, S.C.1
Houston, S.2
Hegde, B.G.3
Langen, R.4
Haworth, I.S.5
Lieber, M.R.6
-
15
-
-
22544460769
-
Both V(D)J coding ends but neither signal end can recombine at the bcl-2 major breakpoint region, and the rejoining is ligase IV dependent
-
Raghavan SC, Hsieh CL, Lieber MR. Both V(D)J coding ends but neither signal end can recombine at the bcl-2 major breakpoint region, and the rejoining is ligase IV dependent. Mol Cell Biol 2005; 25: 6475-6484.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 6475-6484
-
-
Raghavan, S.C.1
Hsieh, C.L.2
Lieber, M.R.3
-
16
-
-
21744455557
-
Double-strand break formation by the RAG complex at the bcl-2 major breakpoint region and at other non-B DNA structures in vitro
-
Raghavan SC, Swanson PC, Ma Y, Lieber MR. Double-strand break formation by the RAG complex at the bcl-2 major breakpoint region and at other non-B DNA structures in vitro. Mol Cell Biol 2005; 25: 5904-5919.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 5904-5919
-
-
Raghavan, S.C.1
Swanson, P.C.2
Ma, Y.3
Lieber, M.R.4
-
17
-
-
4644327494
-
Breakpoints of gross deletions coincide with non-B DNA conformations
-
Bacolla A, Jaworski A, Larson JE, Jakupciak JP, Chuzhanova N, Abeysinghe SS et al. Breakpoints of gross deletions coincide with non-B DNA conformations. Proc Natl Acad Sci USA 2004; 101: 14162-14167.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 14162-14167
-
-
Bacolla, A.1
Jaworski, A.2
Larson, J.E.3
Jakupciak, J.P.4
Chuzhanova, N.5
Abeysinghe, S.S.6
-
18
-
-
4644257592
-
AID is required for c-myc/IgH chromosome translocations in vivo
-
Ramiro AR, Jankovic M, Eisenreich T, Difilippantonio S, Chen-Kiang S, Muramatsu M et al. AID is required for c-myc/IgH chromosome translocations in vivo. Cell 2004; 118: 431-438.
-
(2004)
Cell
, vol.118
, pp. 431-438
-
-
Ramiro, A.R.1
Jankovic, M.2
Eisenreich, T.3
Difilippantonio, S.4
Chen-Kiang, S.5
Muramatsu, M.6
-
19
-
-
26944465454
-
AID binds to transcription-induced structures in c-MYC that map to regions associated with translocation and hypermutation
-
Duquette ML, Pham P, Goodman MF, Maizels N. AID binds to transcription-induced structures in c-MYC that map to regions associated with translocation and hypermutation. Oncogene 2005; 24: 5791-5798.
-
(2005)
Oncogene
, vol.24
, pp. 5791-5798
-
-
Duquette, M.L.1
Pham, P.2
Goodman, M.F.3
Maizels, N.4
-
20
-
-
0017285882
-
Characteristic chromosomal abnormalities in biopsies and lymphoid cell lines from patients with Burkitt and non-Burkitt lymphomas
-
Zech L, Haglund U, Nilsson K, Klein G. Characteristic chromosomal abnormalities in biopsies and lymphoid cell lines from patients with Burkitt and non-Burkitt lymphomas. Int J Cancer 1976; 17: 47-56.
-
(1976)
Int J Cancer
, vol.17
, pp. 47-56
-
-
Zech, L.1
Haglund, U.2
Nilsson, K.3
Klein, G.4
-
21
-
-
0018778372
-
Reciprocal 8;14 translocation in EBV-negative B-cell acute lymphocytic leukemia with burkitt-type cells
-
Mitelman F, Andersson-Anvret M, Brandt L, Catovsky D, Klein G, Manolov G et al. Reciprocal 8;14 translocation in EBV-negative B-cell acute lymphocytic leukemia with burkitt-type cells. Int J Cancer 1979; 24: 27-33.
-
(1979)
Int J Cancer
, vol.24
, pp. 27-33
-
-
Mitelman, F.1
Andersson-Anvret, M.2
Brandt, L.3
Catovsky, D.4
Klein, G.5
Manolov, G.6
-
22
-
-
3242774615
-
Combined polymerase chain reaction methods to detect c-myc/IgH rearrangement in childhood Burkitt s lymphoma for minimal residual disease analysis
-
Busch K, Borkhardt A, Wossmann W, Reiter A, Harbott J. Combined polymerase chain reaction methods to detect c-myc/IgH rearrangement in childhood Burkitt s lymphoma for minimal residual disease analysis. Haematologica 2004; 89: 818-825.
-
(2004)
Haematologica
, vol.89
, pp. 818-825
-
-
Busch, K.1
Borkhardt, A.2
Wossmann, W.3
Reiter, A.4
Harbott, J.5
-
23
-
-
4143078049
-
Level of MYC overexpression in pediatric Burkitt's lymphoma is strongly dependent on genomic breakpoint location within the MYC locus
-
Wilda M, Busch K, Klose I, Keller T, Woessmann W, Kreuder J et al. Level of MYC overexpression in pediatric Burkitt's lymphoma is strongly dependent on genomic breakpoint location within the MYC locus. Genes Chromosome Canceri 2004; 41: 178-182.
-
(2004)
Genes Chromosome Canceri
, vol.41
, pp. 178-182
-
-
Wilda, M.1
Busch, K.2
Klose, I.3
Keller, T.4
Woessmann, W.5
Kreuder, J.6
-
24
-
-
0036489044
-
Clustering of Translocation Breakpoints
-
Segal GH, Wiemels J. Clustering of Translocation Breakpoints. J Am Stat Assoc 2002; 97: 66-76.
-
(2002)
J Am Stat Assoc
, vol.97
, pp. 66-76
-
-
Segal, G.H.1
Wiemels, J.2
-
26
-
-
0027912333
-
Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment
-
Lawrence CE, Altschul SF, Boguski MS, Liu JS, Neuwald AF, Wootton JC. Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment. Science 1993; 262: 208-214.
-
(1993)
Science
, vol.262
, pp. 208-214
-
-
Lawrence, C.E.1
Altschul, S.F.2
Boguski, M.S.3
Liu, J.S.4
Neuwald, A.F.5
Wootton, J.C.6
-
27
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
Bailey TL, Elkan C. Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc Int Conf Intell Syst Mol Biol 1994; 2: 28-36.
-
(1994)
Proc Int Conf Intell Syst Mol Biol
, vol.2
, pp. 28-36
-
-
Bailey, T.L.1
Elkan, C.2
-
28
-
-
0022362207
-
DNA primase-DNA polymerase alpha from simian cells: Sequence specificity of initiation sites on simian virus 40 DNA
-
Yamaguchi M, Hendrickson EA, DePamphilis ML. DNA primase-DNA polymerase alpha from simian cells: Sequence specificity of initiation sites on simian virus 40 DNA. Mol Cell Biol 1985; 5: 1170-1183.
-
(1985)
Mol Cell Biol
, vol.5
, pp. 1170-1183
-
-
Yamaguchi, M.1
Hendrickson, E.A.2
DePamphilis, M.L.3
-
29
-
-
19344370467
-
Mechanism of DNA double-strand break repair by non-homologous end joining
-
Hefferin ML, Tomkinson AE. Mechanism of DNA double-strand break repair by non-homologous end joining. DNA Repair (Amst) 2005; 4: 639-648.
-
(2005)
DNA Repair (Amst)
, vol.4
, pp. 639-648
-
-
Hefferin, M.L.1
Tomkinson, A.E.2
-
30
-
-
0019170192
-
Classification, staging and end results of treatment of childhood non-Hodgkin's lymphomas: Dissimilarities from lymphomas in adults
-
Murphy SB. Classification, staging and end results of treatment of childhood non-Hodgkin's lymphomas: Dissimilarities from lymphomas in adults. Semin Oncol 1980; 7: 332-339.
-
(1980)
Semin Oncol
, vol.7
, pp. 332-339
-
-
Murphy, S.B.1
-
31
-
-
2442700252
-
Paradigm switching in the germinal center
-
Posey JE, Brandt VL, Roth DB. Paradigm switching in the germinal center. Nat Immunol 2004; 5: 476-477.
-
(2004)
Nat Immunol
, vol.5
, pp. 476-477
-
-
Posey, J.E.1
Brandt, V.L.2
Roth, D.B.3
-
32
-
-
0037660900
-
The role of DNA breaks in genomic instability and tumorigenesis
-
Mills KD, Ferguson DO, Alt FW. The role of DNA breaks in genomic instability and tumorigenesis. Immunol Rev 2003; 194: 77-95.
-
(2003)
Immunol Rev
, vol.194
, pp. 77-95
-
-
Mills, K.D.1
Ferguson, D.O.2
Alt, F.W.3
-
33
-
-
0037087306
-
Two new isotype-specific switching activities detected for Ig class switching
-
Ma L, Wortis HH, Kenter AL. Two new isotype-specific switching activities detected for Ig class switching. J Immunol 2002; 168 2835-2846.
-
(2002)
J Immunol
, vol.168
, pp. 2835-2846
-
-
Ma, L.1
Wortis, H.H.2
Kenter, A.L.3
-
34
-
-
0034678391
-
Evidence for class-specific factors in immunoglobulin isotype switching
-
Shanmugam A, Shi MJ, Yauch L, Stavnezer J, Kenter AL. Evidence for class-specific factors in immunoglobulin isotype switching. J Exp Med 2000; 191: 1365-1380.
-
(2000)
J Exp Med
, vol.191
, pp. 1365-1380
-
-
Shanmugam, A.1
Shi, M.J.2
Yauch, L.3
Stavnezer, J.4
Kenter, A.L.5
-
35
-
-
0031252287
-
B cells genetically deficient in the c-Rel transactivation domain have selective defects in germline CH transcription and Ig class switching
-
Zelazowski P, Carrasco D, Rosas FR, Moorman MA, Bravo R, Snapper CM. B cells genetically deficient in the c-Rel transactivation domain have selective defects in germline CH transcription and Ig class switching. J Immunol 1997; 159: 3133-3139.
-
(1997)
J Immunol
, vol.159
, pp. 3133-3139
-
-
Zelazowski, P.1
Carrasco, D.2
Rosas, F.R.3
Moorman, M.A.4
Bravo, R.5
Snapper, C.M.6
-
36
-
-
0035313116
-
NF-kappa B p50-dependent in vivo footprints at Ig S gamma 3 DNA are correlated with mu → gamma 3 switch recombination
-
Wuerffel RA, Ma L, Kenter AL. NF-kappa B p50-dependent in vivo footprints at Ig S gamma 3 DNA are correlated with mu → gamma 3 switch recombination. J Immunol 2001; 166: 4552-4559.
-
(2001)
J Immunol
, vol.166
, pp. 4552-4559
-
-
Wuerffel, R.A.1
Ma, L.2
Kenter, A.L.3
-
37
-
-
0030048332
-
B cells from p50/NF-kappa B knockout mice have selective defects in proliferation, differentiation, germ-line CH transcription, and Ig class switching
-
Snapper CM, Zelazowski P, Rosas FR, Kehry MR, Tian M, Baltimore D et al. B cells from p50/NF-kappa B knockout mice have selective defects in proliferation, differentiation, germ-line CH transcription, and Ig class switching. J Immunol 1996; 156: 183-191.
-
(1996)
J Immunol
, vol.156
, pp. 183-191
-
-
Snapper, C.M.1
Zelazowski, P.2
Rosas, F.R.3
Kehry, M.R.4
Tian, M.5
Baltimore, D.6
-
38
-
-
2442707746
-
53BP1 links DNA damage-response pathways to immunoglobulin heavy chain class-switch recombination
-
Manis JP, Morales JC, Xia Z, Kutok JL, Alt FW, Carpenter PB. 53BP1 links DNA damage-response pathways to immunoglobulin heavy chain class-switch recombination. Nat Immunol 2004; 5: 481-487.
-
(2004)
Nat Immunol
, vol.5
, pp. 481-487
-
-
Manis, J.P.1
Morales, J.C.2
Xia, Z.3
Kutok, J.L.4
Alt, F.W.5
Carpenter, P.B.6
-
39
-
-
2442706035
-
H2AX may function as an anchor to hold broken chromosomal DNA ends in close proximity
-
Bassing CH, Alt FW. H2AX may function as an anchor to hold broken chromosomal DNA ends in close proximity. Cell Cycle 2004; 3: 149-153.
-
(2004)
Cell Cycle
, vol.3
, pp. 149-153
-
-
Bassing, C.H.1
Alt, F.W.2
-
40
-
-
1542377286
-
Molecular biology: Case of mistaken identity
-
Bassing CH, Alt FW. Molecular biology: Case of mistaken identity. Nature 2004; 428: 29-31.
-
(2004)
Nature
, vol.428
, pp. 29-31
-
-
Bassing, C.H.1
Alt, F.W.2
-
41
-
-
0042991379
-
Histone H2AX: A dosage-dependent suppressor of oncogenic translocations and tumors
-
Bassing CH, Suh H, Ferguson DO, Chua KF, Manis J, Eckersdorff M et al. Histone H2AX: A dosage-dependent suppressor of oncogenic translocations and tumors. Cell 2003; 114: 359-370.
-
(2003)
Cell
, vol.114
, pp. 359-370
-
-
Bassing, C.H.1
Suh, H.2
Ferguson, D.O.3
Chua, K.F.4
Manis, J.5
Eckersdorff, M.6
-
42
-
-
0025988156
-
Paranemic structures of DNA and their role in DNA unwinding
-
Yagil G. Paranemic structures of DNA and their role in DNA unwinding. Crit Rev Biochem Mol Biol 1991; 26: 475-559.
-
(1991)
Crit Rev Biochem Mol Biol
, vol.26
, pp. 475-559
-
-
Yagil, G.1
-
43
-
-
0023780437
-
Single strands, triple strands, and kinks in H-DNA
-
Htun H, Dahlberg JE. Single strands, triple strands, and kinks in H-DNA. Science 1988; 241: 1791-1796.
-
(1988)
Science
, vol.241
, pp. 1791-1796
-
-
Htun, H.1
Dahlberg, J.E.2
-
45
-
-
0036212917
-
Molecular mechanism of class switch recombination: Linkage with somatic hypermutation
-
Honjo T, Kinoshita K, Muramatsu M. Molecular mechanism of class switch recombination: Linkage with somatic hypermutation. Annu Rev Immunol 2002; 20:165-196.
-
(2002)
Annu Rev Immunol
, vol.20
, pp. 165-196
-
-
Honjo, T.1
Kinoshita, K.2
Muramatsu, M.3
-
46
-
-
33644643189
-
Role of genomic instability and p53 in AID-induced c-myc-Igh translocations
-
Ramiro AR, Jankovic M, Callen E, Difilippantonio S, Chen HT, McBride KM et al. Role of genomic instability and p53 in AID-induced c-myc-Igh translocations. Nature 2006; 440: 105-109.
-
(2006)
Nature
, vol.440
, pp. 105-109
-
-
Ramiro, A.R.1
Jankovic, M.2
Callen, E.3
Difilippantonio, S.4
Chen, H.T.5
McBride, K.M.6
|