-
1
-
-
14544300915
-
A Bayesian statistical analysis of human T-cell lymphotropic virus evolutionary rates
-
Lemey, P., Pybus, O. G., Van, D. S. & Vandamme, A. M. A Bayesian statistical analysis of human T-cell lymphotropic virus evolutionary rates. Infect. Genet. Evol. 5, 291-298 (2005).
-
(2005)
Infect. Genet. Evol.
, vol.5
, pp. 291-298
-
-
Lemey, P.1
Pybus, O.G.2
Van, D.S.3
Vandamme, A.M.4
-
2
-
-
0035062563
-
Dating the origin of the African human T-cell lymphotropic virus type-i (HTLV-I) subtypes
-
Van, D. S., Salemi, M. & Vandamme, A. M. Dating the origin of the African human T-cell lymphotropic virus type-i (HTLV-I) subtypes. Mol. Biol. Evol. 18, 661-671 (2001).
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 661-671
-
-
Van, D.S.1
Salemi, M.2
Vandamme, A.M.3
-
3
-
-
25444489624
-
Discovery of HTLV-1, the first human retrovirus, its unique regulatory mechanisms, and insights into pathogenesis
-
Yoshida, M. Discovery of HTLV-1, the first human retrovirus, its unique regulatory mechanisms, and insights into pathogenesis. Oncogene 24, 5931-5937 (2005).
-
(2005)
Oncogene
, vol.24
, pp. 5931-5937
-
-
Yoshida, M.1
-
4
-
-
33344456609
-
On the phylogenetic placement of human T cell leukemia virus type 1 sequences associated with an Andean mummy
-
Coulthart, M. B., Posada, D., Crandall, K. A. & Dekaban, G. A. On the phylogenetic placement of human T cell leukemia virus type 1 sequences associated with an Andean mummy. Infect. Genet. Evol. 6, 91-96 (2006).
-
(2006)
Infect. Genet. Evol.
, vol.6
, pp. 91-96
-
-
Coulthart, M.B.1
Posada, D.2
Crandall, K.A.3
Dekaban, G.A.4
-
5
-
-
0034625771
-
Timing the ancestor of the HIV-1 pandemic strains
-
Korber, B. et al. Timing the ancestor of the HIV-1 pandemic strains. Science 288, 1789-1796 (2000).
-
(2000)
Science
, vol.288
, pp. 1789-1796
-
-
Korber, B.1
-
6
-
-
33748452016
-
-
UNAIDS/WHO. [online], (UNAIDS/WHO, Geneva)
-
UNAIDS/WHO. AIDS Epidemic Update 2006. [online], http://www.unaids,org/ HIV_data/epi2006/ (UNAIDS/WHO, Geneva, 2006).
-
(2006)
AIDS Epidemic Update 2006
-
-
-
7
-
-
10944235503
-
Exotic emerging viral diseases: Progress and challenges
-
Geisbert, T. W. & Jahrling, P. B. Exotic emerging viral diseases: progress and challenges. Nature Med. 10, S110-S121 (2004).
-
(2004)
Nature Med.
, vol.10
-
-
Geisbert, T.W.1
Jahrling, P.B.2
-
8
-
-
33645992795
-
Influenza and the challenge for immunology
-
Doherty, P. C., Turner, S. J., Webby, R. G. & Thomas, P. G. Influenza and the challenge for immunology. Nature Immunol. 7, 449-455 (2006).
-
(2006)
Nature Immunol.
, vol.7
, pp. 449-455
-
-
Doherty, P.C.1
Turner, S.J.2
Webby, R.G.3
Thomas, P.G.4
-
9
-
-
28544437130
-
Immunopathogenesis of coronavirus infections: Implications for SARS
-
Perlman, S. & Dandekar, A. A. Immunopathogenesis of coronavirus infections: Implications for SARS. Nature Rev. Immunol. 5, 917-927 (2005).
-
(2005)
Nature Rev. Immunol.
, vol.5
, pp. 917-927
-
-
Perlman, S.1
Dandekar, A.A.2
-
10
-
-
12744269099
-
Natural history of plague: Perspectives from more than a century of research
-
Gage, K. L. & Kosoy, M. Y. Natural history of plague: Perspectives from more than a century of research. Annu. Rev. Entomol. 50, 505-528 (2005).
-
(2005)
Annu. Rev. Entomol.
, vol.50
, pp. 505-528
-
-
Gage, K.L.1
Kosoy, M.Y.2
-
11
-
-
33645105474
-
Yersinia pestis as a telluric, human ectoparasite-borne organism
-
Drancourt, M., Houhamdi, L. & Raoult, D. Yersinia pestis as a telluric, human ectoparasite-borne organism. Lancet Infect. Dis. 6, 234-241 (2006).
-
(2006)
Lancet Infect. Dis.
, vol.6
, pp. 234-241
-
-
Drancourt, M.1
Houhamdi, L.2
Raoult, D.3
-
13
-
-
0036709720
-
A pox on thee! Manipulation of the host immune system by myxoma virus and implications for viral-host co-adaptation
-
Zuniga, M. C. A pox on thee! Manipulation of the host immune system by myxoma virus and implications for viral-host co-adaptation. Virus Res. 88, 17-33 (2002).
-
(2002)
Virus Res.
, vol.88
, pp. 17-33
-
-
Zuniga, M.C.1
-
14
-
-
0034141640
-
Coevolution of host and virus: The pathogenesis of virulent and attenuated strains of myxoma virus in resistant and susceptible European rabbits
-
Best, S. M. & Kerr, P. J. Coevolution of host and virus: The pathogenesis of virulent and attenuated strains of myxoma virus in resistant and susceptible European rabbits. Virology 267, 36-48 (2000).
-
(2000)
Virology
, vol.267
, pp. 36-48
-
-
Best, S.M.1
Kerr, P.J.2
-
15
-
-
2342625970
-
Syphilis in renaissance Europe: Rapid evolution of an introduced sexually transmitted disease?
-
Knell, R. J. Syphilis in renaissance Europe: Rapid evolution of an introduced sexually transmitted disease? Proc. Biol. Sci. 271, S174-S176 (2004).
-
(2004)
Proc. Biol. Sci.
, vol.271
-
-
Knell, R.J.1
-
16
-
-
0028217809
-
Mosaic genome structure of simian immunodeficiency virus from west African green monkeys
-
Jin, M. J. et al. Mosaic genome structure of simian immunodeficiency virus from west African green monkeys. EMBO J. 13, 2935-2947 (1994).
-
(1994)
EMBO J.
, vol.13
, pp. 2935-2947
-
-
Jin, M.J.1
-
17
-
-
0345963070
-
The history of SIVS and AIDS: Epidemiology, phylogeny and biology of isolates from naturally SIV infected non-human primates (NHP) in Africa
-
Apetrei, C., Robertson, D. L. & Marx, P. A. The history of SIVS and AIDS: Epidemiology, phylogeny and biology of isolates from naturally SIV infected non-human primates (NHP) in Africa. Front. Biosci. 9, 225-254 (2004).
-
(2004)
Front. Biosci.
, vol.9
, pp. 225-254
-
-
Apetrei, C.1
Robertson, D.L.2
Marx, P.A.3
-
18
-
-
0242492856
-
Identification of a new simian immunodeficiency virus lineage with a vpu gene present among different cercopithecus monkeys (C. mona, C. cephus, and C. nictitans) from Cameroon
-
Courgnaud, V. et al. Identification of a new simian immunodeficiency virus lineage with a vpu gene present among different cercopithecus monkeys (C. mona, C. cephus, and C. nictitans) from Cameroon. J. Virol. 77, 12523-12534 (2003).
-
(2003)
J. Virol.
, vol.77
, pp. 12523-12534
-
-
Courgnaud, V.1
-
20
-
-
0003426971
-
-
(Wiley, Chichester)
-
Diekmann, O. & Hessterbeek, O. Mathematical Epidemiology of Infectious Diseases: Model Building, Analysis, and Interpretation (Wiley, Chichester, 2006).
-
(2006)
Mathematical Epidemiology of Infectious Diseases: Model Building, Analysis, and Interpretation
-
-
Diekmann, O.1
Hessterbeek, O.2
-
23
-
-
0037471310
-
Sorting out the complexities of HIV-1 fitness
-
Arts, E. J. & Ouinones-Mateu, M. E. Sorting out the complexities of HIV-1 fitness. AIDS 17, 780-781 (2003).
-
(2003)
AIDS
, vol.17
, pp. 780-781
-
-
Arts, E.J.1
Ouinones-Mateu, M.E.2
-
24
-
-
0001769435
-
-
[online], (HIV Sequence Compendium, Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Lcs Alamos)
-
Quinones-Mateu, M. E. & Arts, E. J. HIV-1 Fitness: Implications for Drug Resistance, Disease Progression, and Global Epidemic Evolution. [online], http://hiv.lanl.gov/content/hiv-db/COMPENDIUM/2001/partI/ Quinones.pdf (HIV Sequence Compendium, Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Lcs Alamos, 2001).
-
(2001)
HIV-1 Fitness: Implications for Drug Resistance, Disease Progression, and Global Epidemic Evolution
-
-
Quinones-Mateu, M.E.1
Arts, E.J.2
-
25
-
-
0033587620
-
Mechanistic studies examining the efficiency and fidelity of DNA synthesis by the 3TC-resistant mutant (184V) of HIV-1 reverse transcriptase
-
Feng, J. Y. & Anderson, K. S. Mechanistic studies examining the efficiency and fidelity of DNA synthesis by the 3TC-resistant mutant (184V) of HIV-1 reverse transcriptase. Biochemistry 38, 9440-9448 (1999).
-
(1999)
Biochemistry
, vol.38
, pp. 9440-9448
-
-
Feng, J.Y.1
Anderson, K.S.2
-
26
-
-
0347052875
-
Mechanistic basis for reduced viral and enzymatic fitness of HIV-1 reverse transcriptase containing both K65R and M184V mutations
-
Deval, J. et al. Mechanistic basis for reduced viral and enzymatic fitness of HIV-1 reverse transcriptase containing both K65R and M184V mutations. J. Biol. Chem. 279, 509-516 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 509-516
-
-
Deval, J.1
-
27
-
-
0028162943
-
Virulence
-
Bull, J. J. Virulence. Evolution 48, 1423-1437 (1994).
-
(1994)
Evolution
, vol.48
, pp. 1423-1437
-
-
Bull, J.J.1
-
28
-
-
0020535921
-
A game-theoretical model of parasite virulence
-
Bremermann, H. J. & Pickering, J. A game-theoretical model of parasite virulence. J. Theor. Biol. 100, 411-426 (1983).
-
(1983)
J. Theor. Biol.
, vol.100
, pp. 411-426
-
-
Bremermann, H.J.1
Pickering, J.2
-
29
-
-
21644477889
-
Changes in human immunodeficiency virus type 1 fitness and genetic diversity during disease progression
-
Troyer, R. M. et al. Changes in human immunodeficiency virus type 1 fitness and genetic diversity during disease progression. J. Virol. 79, 9006-9018 (2005).
-
(2005)
J. Virol.
, vol.79
, pp. 9006-9018
-
-
Troyer, R.M.1
-
30
-
-
0033803642
-
Dual infection/competition assay shows a correlation between ex vivo human immunodeficiency virus type 1 fitness and disease progression
-
Quinones-Mateu, M. E. et al. dual infection/competition assay shows a correlation between ex vivo human immunodeficiency virus type 1 fitness and disease progression. J. Virol. 74, 9222-9233 (2000).
-
(2000)
J. Virol.
, vol.74
, pp. 9222-9233
-
-
Quinones-Mateu, M.E.1
-
31
-
-
0031884993
-
In vitro replication kinetics of human immunodeficiency virus type 1 (HIV-1) variants in relation to virus load in long-term survivors of HIV-1 infection
-
Blaak, H., Brouwer, M., Ran, L. J., de Wolf, F. & Schuitemaker, H. In vitro replication kinetics of human immunodeficiency virus type 1 (HIV-1) variants in relation to virus load in long-term survivors of HIV-1 infection. J. Infect. Dis. 177, 600-610 (1998).
-
(1998)
J. Infect. Dis.
, vol.177
, pp. 600-610
-
-
Blaak, H.1
Brouwer, M.2
Ran, L.J.3
de Wolf, F.4
Schuitemaker, H.5
-
32
-
-
3142678466
-
+ T cell counts associated with low viral pol replication capacity among treatment-naive adults in early HIV-1 infection
-
+ T cell counts associated with low viral pol replication capacity among treatment-naive adults in early HIV-1 infection. J. Infect. Dis. 190, 251-256 (2004).
-
(2004)
J. Infect. Dis.
, vol.190
, pp. 251-256
-
-
Barbour, J.D.1
-
35
-
-
0000841452
-
Group selection and kin selection
-
Maynard, S. J. Group selection and kin selection. Nature 201, 1145-1147 (1964).
-
(1964)
Nature
, vol.201
, pp. 1145-1147
-
-
Maynard, S.J.1
-
36
-
-
0031582708
-
From replicators to reproducers: The first major transitions leading to life
-
Szathmary, E. & Maynard, S. J. From replicators to reproducers: The first major transitions leading to life. J. Theor. Biol. 187, 555-571 (1997).
-
(1997)
J. Theor. Biol.
, vol.187
, pp. 555-571
-
-
Szathmary, E.1
Maynard, S.J.2
-
37
-
-
33745059199
-
Chimpanzee reservoirs of pandemic and nonpandemic HIV-1
-
Keele, B. F. et al. Chimpanzee reservoirs of pandemic and nonpandemic HIV-1. Science 313, 523-526 (2006).
-
(2006)
Science
, vol.313
, pp. 523-526
-
-
Keele, B.F.1
-
38
-
-
0033521911
-
Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes
-
Gao, F. et al. Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes. Nature 397, 436-441 (1999).
-
(1999)
Nature
, vol.397
, pp. 436-441
-
-
Gao, F.1
-
39
-
-
0037126998
-
SIVcpz in wild chimpanzees
-
Santiago, M. L. et al. SIVcpz in wild chimpanzees. Science 295, 465 (2002).
-
(2002)
Science
, vol.295
, pp. 465
-
-
Santiago, M.L.1
-
40
-
-
33750855853
-
Human immunodeficiency viruses: SIV infection in wild gorillas
-
Van Heuverswyn, F. et al. Human immunodeficiency viruses: SIV infection in wild gorillas. Nature 444, 164 (2006).
-
(2006)
Nature
, vol.444
, pp. 164
-
-
Van Heuverswyn, F.1
-
41
-
-
22944457912
-
Influenza: Lessons from past pandemics, warnings from current incidents
-
Horimoto, T. & Kawaoka, Y. Influenza: Lessons from past pandemics, warnings from current incidents. Nature Rev. Microbiol. 3, 591-600 (2005).
-
(2005)
Nature Rev. Microbiol.
, vol.3
, pp. 591-600
-
-
Horimoto, T.1
Kawaoka, Y.2
-
42
-
-
0024394010
-
An African primate lentivirus (SIVsm) closely related to HIV-2
-
Hirsch, V. M., Olmsted, R. A., Murphey-Corb, M., Purcell, R. H. & Johnson, P. R. An African primate lentivirus (SIVsm) closely related to HIV-2. Nature 339, 389-392 (1989).
-
(1989)
Nature
, vol.339
, pp. 389-392
-
-
Hirsch, V.M.1
Olmsted, R.A.2
Murphey-Corb, M.3
Purcell, R.H.4
Johnson, P.R.5
-
43
-
-
0038312916
-
Tracing the origin and history of the HIV-2 epidemic
-
Lemey, P. et al. Tracing the origin and history of the HIV-2 epidemic. Proc. Natl Acad. Sci. USA 100, 6588-6592 (2003).
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 6588-6592
-
-
Lemey, P.1
-
44
-
-
0002315910
-
Towards a better understanding of the epidemiology of HIV-2
-
Schim van der Loeff, M. F. & Aaby, P. Towards a better understanding of the epidemiology of HIV-2. AIDS 13, S69-S84 (1999).
-
(1999)
AIDS
, vol.13
-
-
Schim van der Loeff, M.F.1
Aaby, P.2
-
45
-
-
33750204532
-
Sixteen years of HIV surveillance in a West African research clinic reveals divergent epidemic trends of HIV-1 and HIV-2
-
Schim van der Loeff, M. F. et al. Sixteen years of HIV surveillance in a West African research clinic reveals divergent epidemic trends of HIV-1 and HIV-2. Int. J. Epidemiol. 35, 1322-1328 (2006).
-
(2006)
Int. J. Epidemiol.
, vol.35
, pp. 1322-1328
-
-
Schim van der Loeff, M.F.1
-
46
-
-
0035344891
-
HIV-1 group O infection in Cameroon, 1986 to 1998
-
Ayouba, A. et al. HIV-1 group O infection in Cameroon, 1986 to 1998. Emerg. Infect. Dis. 7, 466-467 (2001).
-
(2001)
Emerg. Infect. Dis.
, vol.7
, pp. 466-467
-
-
Ayouba, A.1
-
47
-
-
5644287537
-
HIV-1 infections in northwestern Cameroon: Identification of HIV type 1 group O and dual HIV type 1 group M and group O infections
-
Yamaguchi, J. et al. HIV-1 infections in northwestern Cameroon: identification of HIV type 1 group O and dual HIV type 1 group M and group O infections. AIDS Res. Hum. Retroviruses 20, 944-957 (2004).
-
(2004)
AIDS Res. Hum. Retroviruses
, vol.20
, pp. 944-957
-
-
Yamaguchi, J.1
-
48
-
-
33646860954
-
HIV-1 Group N: Evidence of ongoing transmission in Cameroon
-
Yamaguchi, J. et al. HIV-1 Group N: Evidence of ongoing transmission in Cameroon. AIDS Res. Hum. Retroviruses 22, 453-457 (2006).
-
(2006)
AIDS Res. Hum. Retroviruses
, vol.22
, pp. 453-457
-
-
Yamaguchi, J.1
-
49
-
-
32044447150
-
Identification of HIV type 1 group N infections in a husband and wife in Cameroon: Viral genome sequences provide evidence for horizontal transmission
-
Yamaguchi, J. et al. Identification of HIV type 1 group N infections in a husband and wife in Cameroon: Viral genome sequences provide evidence for horizontal transmission. AIDS Res. Hum. Retroviruses 22, 83-92 (2006).
-
(2006)
AIDS Res. Hum. Retroviruses
, vol.22
, pp. 83-92
-
-
Yamaguchi, J.1
-
50
-
-
0035261070
-
Dating the common ancestor of SIVcpz and HIV-1 group M and the origin of HIV-1 subtypes using a new method to uncover clock-like molecular evolution
-
Salemi, M. et al. Dating the common ancestor of SIVcpz and HIV-1 group M and the origin of HIV-1 subtypes using a new method to uncover clock-like molecular evolution. FASEB J. 15, 276-278 (2001).
-
(2001)
FASEB J.
, vol.15
, pp. 276-278
-
-
Salemi, M.1
-
51
-
-
4544289290
-
Timing and reconstruction of the most recent common ancestor of the subtype C clade of human immunodeficiency virus type 1
-
Travers, S. A. et al. Timing and reconstruction of the most recent common ancestor of the subtype C clade of human immunodeficiency virus type 1. J. Virol. 78, 10501-10506 (2004).
-
(2004)
J. Virol.
, vol.78
, pp. 10501-10506
-
-
Travers, S.A.1
-
52
-
-
21644472626
-
The replicative fitness of primary human immunodeficiency virus type 1 (HIV-1) group M, HIV-1 group O, and HIV-2 isolates
-
Arien, K. K. et al. The replicative fitness of primary human immunodeficiency virus type 1 (HIV-1) group M, HIV-1 group O, and HIV-2 isolates. J. Virol. 79, 8979-8990 (2005).
-
(2005)
J. Virol.
, vol.79
, pp. 8979-8990
-
-
Arien, K.K.1
-
53
-
-
0037223706
-
Comparing the ex vivo fitness of CCR5-tropic human immunodeficiency virus type 1 isolates of subtypes B and C
-
Ball, S. C. et al. Comparing the ex vivo fitness of CCR5-tropic human immunodeficiency virus type 1 isolates of subtypes B and C. J. Virol. 77, 1021-1038 (2003).
-
(2003)
J. Virol.
, vol.77
, pp. 1021-1038
-
-
Ball, S.C.1
-
54
-
-
0027402782
-
Distinguishing features of an infectious molecular clone of the highly divergent and noncytopathic human immunodeficiency virus type 2 UC1 strain
-
Barnett, S. W., Quiroga, M., Werner, A., Dina, D. & Levy, J. A. Distinguishing features of an infectious molecular clone of the highly divergent and noncytopathic human immunodeficiency virus type 2 UC1 strain. J. Virol. 67, 1006-1014 (1993).
-
(1993)
J. Virol.
, vol.67
, pp. 1006-1014
-
-
Barnett, S.W.1
Quiroga, M.2
Werner, A.3
Dina, D.4
Levy, J.A.5
-
55
-
-
0027153305
-
Mapping the determinants of human immunodeficiency virus 2 for infectivity, replication efficiency, and cytopathicity
-
Talbott, R., Kraus, G., Looney, D. & Wong-Staal, F. Mapping the determinants of human immunodeficiency virus 2 for infectivity, replication efficiency, and cytopathicity. Proc. Natl Acad. Sci. USA 90, 4226-4230 (1993).
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 4226-4230
-
-
Talbott, R.1
Kraus, G.2
Looney, D.3
Wong-Staal, F.4
-
56
-
-
12144287132
-
Phenotypic and genotypic comparisons of CCR5- and CXCR4-tropic human immunodeficiency virus type 1 biological clones isolated from subtype C-infected individuals
-
Pollakis, G. et al. Phenotypic and genotypic comparisons of CCR5- and CXCR4-tropic human immunodeficiency virus type 1 biological clones isolated from subtype C-infected individuals. J. Virol. 78, 2841-2852 (2004).
-
(2004)
J. Virol.
, vol.78
, pp. 2841-2852
-
-
Pollakis, G.1
-
57
-
-
0023868337
-
Epidemiology of HIV infection and AIDS in the United States
-
Curran, J. W. et al. Epidemiology of HIV infection and AIDS in the United States. Science 239, 610-616 (1988).
-
(1988)
Science
, vol.239
, pp. 610-616
-
-
Curran, J.W.1
-
58
-
-
0029617818
-
Number of sexual partners, condom use and risk of human immunodeficiency virus infection
-
Parazzini, F. et al. Number of sexual partners, condom use and risk of human immunodeficiency virus infection. Int. J. Epidemiol. 24, 1197-1203 (1995).
-
(1995)
Int. J. Epidemiol.
, vol.24
, pp. 1197-1203
-
-
Parazzini, F.1
-
59
-
-
0028145356
-
Reasons for the wide variation in reported rates of mother-to-child transmission of HIV-1
-
Ryder, R. W. & Behets, F. Reasons for the wide variation in reported rates of mother-to-child transmission of HIV-1. AIDS 8, 1495-1497 (1994).
-
(1994)
AIDS
, vol.8
, pp. 1495-1497
-
-
Ryder, R.W.1
Behets, F.2
-
60
-
-
0035857959
-
Probability of HIV-1 transmission per coital act in monogamous, heterosexual, HIV-1-discordant couples in Rakai, Uganda
-
Gray, R. H. et al. Probability of HIV-1 transmission per coital act in monogamous, heterosexual, HIV-1-discordant couples in Rakai, Uganda. Lancet 357, 1149-1153 (2001).
-
(2001)
Lancet
, vol.357
, pp. 1149-1153
-
-
Gray, R.H.1
-
61
-
-
0034732201
-
Viral load and heterosexual transmission of human immunodeficiency virus type 1
-
Rakai Project Study Group
-
Quinn, T. C. et al. Viral load and heterosexual transmission of human immunodeficiency virus type 1. Rakai Project Study Group. N. Engl. J Med. 342, 921-929 (2000).
-
(2000)
N. Engl. J Med.
, vol.342
, pp. 921-929
-
-
Quinn, T.C.1
-
62
-
-
0033527028
-
Maternal levels of plasma human immunodeficiency virus type 1 RNA and the risk of perinatal transmission
-
Women and Infants Transmission Study Group
-
Garcia, P. M. et al. Maternal levels of plasma human immunodeficiency virus type 1 RNA and the risk of perinatal transmission. Women and Infants Transmission Study Group. N. Engl. J Med. 341, 394-402 (1999).
-
(1999)
N. Engl. J Med.
, vol.341
, pp. 394-402
-
-
Garcia, P.M.1
-
63
-
-
0032710838
-
Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection
-
Shankarappa, R. et al. Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection. J. Virol. 73, 10489-10502 (1999).
-
(1999)
J. Virol.
, vol.73
, pp. 10489-10502
-
-
Shankarappa, R.1
-
64
-
-
0027422278
-
Genotypic and phenotypic characterization of HIV-1 patients with primary infection
-
Zhu, T. et al. Genotypic and phenotypic characterization of HIV-1 patients with primary infection. Science 261, 1179-1181 (1993).
-
(1993)
Science
, vol.261
, pp. 1179-1181
-
-
Zhu, T.1
-
65
-
-
0345569681
-
Inhibiting sexual transmission of HIV-1 infection
-
Shattock, R. J. & Moore, J. P. Inhibiting sexual transmission of HIV-1 infection. Nature Rev. Microbiol. 1, 25-34 (2003).
-
(2003)
Nature Rev. Microbiol.
, vol.1
, pp. 25-34
-
-
Shattock, R.J.1
Moore, J.P.2
-
66
-
-
0034053686
-
In vitro models of mucosal HIV transmission
-
Shattock, R. J., Griffin, G. E. & Gorodeski, G. I. In vitro models of mucosal HIV transmission. Nature Med. 6, 607-608 (2000).
-
(2000)
Nature Med.
, vol.6
, pp. 607-608
-
-
Shattock, R.J.1
Griffin, G.E.2
Gorodeski, G.I.3
-
67
-
-
0033609141
-
Transmission bottlenecks as determinants of virulence in rapidly evolving pathogens
-
Bergstrom, C. T., McElhany, P. & Real, L. A. Transmission bottlenecks as determinants of virulence in rapidly evolving pathogens. Proc. Natl Acad. Sci. USA 96, 5095-5100 (1999).
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 5095-5100
-
-
Bergstrom, C.T.1
McElhany, P.2
Real, L.A.3
-
68
-
-
0141633021
-
Resistance of virus to extinction on bottleneck passages: Study of a decaying and fluctuating pattern of fitness loss
-
Lazaro, E., Escarmis, C., Perez-Mercader, J., Manrubia, S. C. & Domingo, E. Resistance of virus to extinction on bottleneck passages: Study of a decaying and fluctuating pattern of fitness loss. Proc. Natl Acad. Sci. US4 100, 10830-10835 (2003).
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 10830-10835
-
-
Lazaro, E.1
Escarmis, C.2
Perez-Mercader, J.3
Manrubia, S.C.4
Domingo, E.5
-
69
-
-
0029896917
-
Evolution of fitness in experimental populations of vesicular stomatitis virus
-
Elena, S. F. et al. Evolution of fitness in experimental populations of vesicular stomatitis virus. Genetics 142, 673-679 (1996).
-
(1996)
Genetics
, vol.142
, pp. 673-679
-
-
Elena, S.F.1
-
70
-
-
0242491896
-
Infection with multiple human immunodeficiency virus type 1 variants is associated with faster disease progression
-
Sagar, M. et al. Infection with multiple human immunodeficiency virus type 1 variants is associated with faster disease progression. J. Virol. 77, 12921-12926 (2003).
-
(2003)
J. Virol.
, vol.77
, pp. 12921-12926
-
-
Sagar, M.1
-
71
-
-
0031664158
-
Longitudinal analysis of human immunodeficiency virus type 1-specific cytotoxic T lymphocyte responses: A predominant gag-specific response is associated with nonprogressive infection
-
Pontesilli, O. et al. Longitudinal analysis of human immunodeficiency virus type 1-specific cytotoxic T lymphocyte responses: A predominant gag-specific response is associated with nonprogressive infection. J. Infect. Dis. 178, 1008-1018 (1998).
-
(1998)
J. Infect. Dis.
, vol.178
, pp. 1008-1018
-
-
Pontesilli, O.1
-
72
-
-
0032888972
-
Strong human immunodeficiency virus (HIV)-specific cytotoxic T-lymphocyte activity in Sydney blood bank cohort patients infected with nef-defective HIV type 1
-
Dyer, W. B. et al. Strong human immunodeficiency virus (HIV)-specific cytotoxic T-lymphocyte activity in Sydney blood bank cohort patients infected with nef-defective HIV type 1. J. Virol. 73, 436-443 (1999).
-
(1999)
J. Virol.
, vol.73
, pp. 436-443
-
-
Dyer, W.B.1
-
73
-
-
0028847578
-
Virologic and immunologic characterization of long-term survivors of human immunodeficiency virus type 1 infection
-
Cao, Y., Qin, L., Zhang, L., Safrit, J. & Ho, D. D. Virologic and immunologic characterization of long-term survivors of human immunodeficiency virus type 1 infection. N. Eng. J. Med. 332, 201-208 (1995).
-
(1995)
N. Eng. J. Med.
, vol.332
, pp. 201-208
-
-
Cao, Y.1
Qin, L.2
Zhang, L.3
Safrit, J.4
Ho, D.D.5
-
74
-
-
0028861377
-
Studies in subjects with long-term nonprogressive human immunodeficiency virus infection
-
Pantaleo, G. et al. Studies in subjects with long-term nonprogressive human immunodeficiency virus infection. N. Eng. J. Med. 332, 209-216 (1995).
-
(1995)
N. Eng. J. Med.
, vol.332
, pp. 209-216
-
-
Pantaleo, G.1
-
75
-
-
0030057730
-
Neutralizing and infection-enhancing antibody responses to human immunodeficiency virus type 1 in long-term nonprogressors
-
Montefiori, D. C. et al. Neutralizing and infection-enhancing antibody responses to human immunodeficiency virus type 1 in long-term nonprogressors. J. Infect. Dis. 173, 60-67 (1996).
-
(1996)
J. Infect. Dis.
, vol.173
, pp. 60-67
-
-
Montefiori, D.C.1
-
77
-
-
0030665257
-
+ T cell responses associated with control of viremia
-
+ T cell responses associated with control of viremia. Science 278, 1447-1450 (1997).
-
(1997)
Science
, vol.278
, pp. 1447-1450
-
-
Rosenberg, E.S.1
-
78
-
-
0001633495
-
Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CKR5 structural gene
-
Dean, M. et al. Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CKR5 structural gene. Science 273, 1856-1862 (1996).
-
(1996)
Science
, vol.273
, pp. 1856-1862
-
-
Dean, M.1
-
79
-
-
0033012398
-
Chemokine receptors as HIV-1 coreceptors: Roles in viral entry, tropism, and disease
-
Berger, E. A., Murphy, P. M. & Farber, J. M. Chemokine receptors as HIV-1 coreceptors: Roles in viral entry, tropism, and disease. Annu. Rev. Immunol. 17, 657-700 (1999).
-
(1999)
Annu. Rev. Immunol.
, vol.17
, pp. 657-700
-
-
Berger, E.A.1
Murphy, P.M.2
Farber, J.M.3
-
80
-
-
19244384846
-
Global survey of genetic variation in CCR5, RANTES, and MIP-1α: Impact on the epidemiology of the HIV-1 pandemic
-
Gonzalez, E. et al. Global survey of genetic variation in CCR5, RANTES, and MIP-1α: Impact on the epidemiology of the HIV-1 pandemic. Proc. Natl Acad. Sci. USA 98, 5199-5204 (2001).
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 5199-5204
-
-
Gonzalez, E.1
-
81
-
-
20044377204
-
The influence of CCL3L 1 gene-containing segmental duplications on HIV-1/AIDS susceptibility
-
Gonzalez, E. et al. The influence of CCL3L 1 gene-containing segmental duplications on HIV-1/AIDS susceptibility. Science 307, 1434-1440 (2005).
-
(2005)
Science
, vol.307
, pp. 1434-1440
-
-
Gonzalez, E.1
-
82
-
-
0032511573
-
CCR5 promoter polymorphism and HIV-1 disease progression
-
Multicenter AIDS Cohort Study (MACS)
-
McDermott, D. H. et al. CCR5 promoter polymorphism and HIV-1 disease progression. Multicenter AIDS Cohort Study (MACS). Lancet 352, 866-870 (1998).
-
(1998)
Lancet
, vol.352
, pp. 866-870
-
-
McDermott, D.H.1
-
83
-
-
0030070991
-
Prognosis in HIV-1 infection predicted by the quantity of virus in plasma
-
Mellors, J. W. et al. Prognosis in HIV-1 infection predicted by the quantity of virus in plasma. Science 272, 1167-1170 (1996).
-
(1996)
Science
, vol.272
, pp. 1167-1170
-
-
Mellors, J.W.1
-
84
-
-
2442723342
-
Treatment of human immunodeficiency virus infection with saquinavir, zidovudine, and zalcitabine
-
AIDS Clinical Trials Group
-
Collier, A. C. et al. Treatment of human immunodeficiency virus infection with saquinavir, zidovudine, and zalcitabine. AIDS Clinical Trials Group. N. Engl. J. Med. 334, 1011-1017 (1996).
-
(1996)
N. Engl. J. Med.
, vol.334
, pp. 1011-1017
-
-
Collier, A.C.1
-
85
-
-
0037343278
-
Nonpathogenic SIV infection of sooty mangabeys is characterized by limited bystander immunopathology despite chronic high-level viremia
-
Silvestri, G. et al. Nonpathogenic SIV infection of sooty mangabeys is characterized by limited bystander immunopathology despite chronic high-level viremia. Immunity. 18, 441-452 (2003).
-
(2003)
Immunity
, vol.18
, pp. 441-452
-
-
Silvestri, G.1
-
86
-
-
33749079234
-
Predictive value of plasma HIV RNA level on rate of CD4 T-cell decline in untreated HIV infection
-
Rodriguez, B. et al. Predictive value of plasma HIV RNA level on rate of CD4 T-cell decline in untreated HIV infection. JAMA 296, 1498-1506 (2006).
-
(2006)
JAMA
, vol.296
, pp. 1498-1506
-
-
Rodriguez, B.1
-
87
-
-
0028804160
-
Genomic structure of an attenuated quasispecies of HIV-1 from a blood transfusion donor and recipients
-
Deacon, N. J. et al. Genomic structure of an attenuated quasispecies of HIV-1 from a blood transfusion donor and recipients. Science 270, 988-991 (1995).
-
(1995)
Science
, vol.270
, pp. 988-991
-
-
Deacon, N.J.1
-
88
-
-
0028835788
-
Brief report: Absence of intact nef sequences in a long-term survivor with nonprogressive HIV-1 infection
-
Kirchhoff, F., Greenough, T. C., Brettler, D. B., Sullivan, J. L. & Desrosiers, R. C. Brief report: Absence of intact nef sequences in a long-term survivor with nonprogressive HIV-1 infection. N. Eng. J. Med. 332, 228-232 (1995).
-
(1995)
N. Eng. J. Med.
, vol.332
, pp. 228-232
-
-
Kirchhoff, F.1
Greenough, T.C.2
Brettler, D.B.3
Sullivan, J.L.4
Desrosiers, R.C.5
-
89
-
-
0028838656
-
Biological characterization of nef in long-term survivors of human immunodeficiency virus type 1 infection
-
Huang, Y., Zhang, I. & Ho, D. D. Biological characterization of nef in long-term survivors of human immunodeficiency virus type 1 infection. J. Virol. 69, 8142-8146 (1995).
-
(1995)
J. Virol.
, vol.69
, pp. 8142-8146
-
-
Huang, Y.1
Zhang, I.2
Ho, D.D.3
-
90
-
-
0030807901
-
Novel and dynamic evolution of equine infectious anemia virus genomic quasispecies associated with sequential disease cycles in an experimentally infected pony
-
Leroux, C., Issel, C. J. & Montelaro, R. C. Novel and dynamic evolution of equine infectious anemia virus genomic quasispecies associated with sequential disease cycles in an experimentally infected pony. J. Virol. 71, 9627-9639 (1997).
-
(1997)
J. Virol.
, vol.71
, pp. 9627-9639
-
-
Leroux, C.1
Issel, C.J.2
Montelaro, R.C.3
-
91
-
-
0034895978
-
Replication competition between lactate dehydrogenase-elevating virus quasispecies in mice. Implications for quasispecies selection and evolution
-
Plagemann, P. G., Chen, Z. & Li, K. Replication competition between lactate dehydrogenase-elevating virus quasispecies in mice. Implications for quasispecies selection and evolution. Arch. Virol. 146, 1283-1296 (2001).
-
(2001)
Arch. Virol.
, vol.146
, pp. 1283-1296
-
-
Plagemann, P.G.1
Chen, Z.2
Li, K.3
-
92
-
-
0035330599
-
A novel recombinant marker virus assay for comparing the relative fitness of hiv-1 reverse transcriptase variants
-
Lu, J. & Kuritzkes, D. R. A novel recombinant marker virus assay for comparing the relative fitness of hiv-1 reverse transcriptase variants. J. Acquir. Immune. Defic. Syndr. 27, 7-13 (2001).
-
(2001)
J. Acquir. Immune. Defic. Syndr.
, vol.27
, pp. 7-13
-
-
Lu, J.1
Kuritzkes, D.R.2
-
93
-
-
0026070176
-
Quantitation of relative fitness and great adaptability of clonal populations of RNA viruses
-
Holland, J. J., de la Torre, J. C., Clarke, D. K. & Duarte, E. Quantitation of relative fitness and great adaptability of clonal populations of RNA viruses. J. Virol. 65, 2960-2967 (1991).
-
(1991)
J. Virol.
, vol.65
, pp. 2960-2967
-
-
Holland, J.J.1
de la Torre, J.C.2
Clarke, D.K.3
Duarte, E.4
-
94
-
-
0003638947
-
-
in (eds Domingo, E., Webster, R. & Holland, J.) (Academic Press, San Diego)
-
Domingo, E., Escarmis, C., Menendez-Arias, L. & Holland, J. in Origin And Evolution of Viruses (eds Domingo, E., Webster, R. & Holland, J.) 141-161 (Academic Press, San Diego, 1999).
-
(1999)
Origin And Evolution of Viruses
, pp. 141-161
-
-
Domingo, E.1
Escarmis, C.2
Menendez-Arias, L.3
Holland, J.4
-
95
-
-
0031958266
-
Relative replicative fitness of zidovudine-resistant human immunodeficiency virus type 1 isolates in vitro
-
Harrigan, P. R., Bloor, S. & Larder, B. A. Relative replicative fitness of zidovudine-resistant human immunodeficiency virus type 1 isolates in vitro. J. Virol. 72, 3773-3778 (1998).
-
(1998)
J. Virol.
, vol.72
, pp. 3773-3778
-
-
Harrigan, P.R.1
Bloor, S.2
Larder, B.A.3
-
96
-
-
30644462096
-
Virus fitness: Concept, quantification, and application to HIV population dynamics
-
Ouinones-Mateu, M. E. & Arts, E. J. Virus fitness: Concept, quantification, and application to HIV population dynamics. Curr. Top. Microbiol. Immunol. 299, 83-140 (2006).
-
(2006)
Curr. Top. Microbiol. Immunol.
, vol.299
, pp. 83-140
-
-
Ouinones-Mateu, M.E.1
Arts, E.J.2
-
97
-
-
0028276791
-
The red queen reigns in the kingdom of RNA viruses
-
Clarke, D. K. et al. The red queen reigns in the kingdom of RNA viruses. Proc. Natl Acad. Sci. USA 91, 4821-4824 (1994).
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 4821-4824
-
-
Clarke, D.K.1
-
98
-
-
0029072721
-
Exponential increases of RNA virus fitness during large population transmissions
-
Novella, I. S. et al. Exponential increases of RNA virus fitness during large population transmissions. Proc. Natl Acad. Sci. USA 92, 5841-5844 (1995).
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 5841-5844
-
-
Novella, I.S.1
-
99
-
-
0025244957
-
Fitness of RNA virus decreased by Muller's ratchet
-
Chao, L. Fitness of RNA virus decreased by Muller's ratchet. Nature 348, 454-455 (1990).
-
(1990)
Nature
, vol.348
, pp. 454-455
-
-
Chao, L.1
-
100
-
-
0030747157
-
RNA virus mutations and fitness for survival
-
Domingo, E. & Holland, J. J. RNA virus mutations and fitness for survival. Annu. Rev. Microbiol. 51, 151-178 (1997).
-
(1997)
Annu. Rev. Microbiol.
, vol.51
, pp. 151-178
-
-
Domingo, E.1
Holland, J.J.2
-
101
-
-
0345471842
-
Drastic fitness loss in human immunodeficiency virus type 1 upon serial bottleneck events
-
Yuste, E., Sanchez-Palomino, S., Casado, C., Domingo, E. & Lopez-Galindez, C. Drastic fitness loss in human immunodeficiency virus type 1 upon serial bottleneck events. J. Virol. 73, 2745-2751 (1999).
-
(1999)
J. Virol.
, vol.73
, pp. 2745-2751
-
-
Yuste, E.1
Sanchez-Palomino, S.2
Casado, C.3
Domingo, E.4
Lopez-Galindez, C.5
-
102
-
-
30644478156
-
Evolutionary dynamics of HIV-1 and the control of AIDS
-
Mullins, J. I. & Jensen, M. A. Evolutionary dynamics of HIV-1 and the control of AIDS. Curr. Top. Microbiol. Immunol. 299, 171-192 (2006).
-
(2006)
Curr. Top. Microbiol. Immunol.
, vol.299
, pp. 171-192
-
-
Mullins, J.I.1
Jensen, M.A.2
-
103
-
-
0028811974
-
Viral dynamics in human immunodeficiency virus type 1 infection
-
Wei, X. et al. Viral dynamics in human immunodeficiency virus type 1 infection. Nature 373, 117-122 (1995).
-
(1995)
Nature
, vol.373
, pp. 117-122
-
-
Wei, X.1
-
104
-
-
0035198096
-
+ T-cell responses: Relationship to viral load in untreated HIV infection
-
+ T-cell responses: Relationship to viral load in untreated HIV infection. J. Virol. 75, 11983-11991 (2001).
-
(2001)
J. Virol.
, vol.75
, pp. 11983-11991
-
-
Betts, M.R.1
-
105
-
-
0034727073
-
Immune control of HIV-1 after early treatment of acute infection
-
Rosenberg, E. S. et al. Immune control of HIV-1 after early treatment of acute infection. Nature 407, 523-526 (2000).
-
(2000)
Nature
, vol.407
, pp. 523-526
-
-
Rosenberg, E.S.1
-
106
-
-
0035862326
-
Substantial differences in specificity of HIV-specific cytotoxic T cells in acute and chronic HIV infection
-
Goulder, P. J. et al. Substantial differences in specificity of HIV-specific cytotoxic T cells in acute and chronic HIV infection. J. Exp. Med. 193, 181-194 (2001).
-
(2001)
J. Exp. Med.
, vol.193
, pp. 181-194
-
-
Goulder, P.J.1
-
107
-
-
3543078012
-
HIV and SIV CTL escape: Implications for vaccine design
-
Goulder, P. J. & Watkins, D. I. HIV and SIV CTL escape: Implications for vaccine design. Nature Rev. Immunol. 4, 630-640 (2004).
-
(2004)
Nature Rev. Immunol.
, vol.4
, pp. 630-640
-
-
Goulder, P.J.1
Watkins, D.I.2
-
108
-
-
12144291194
-
Differentiation between African populations is evidenced by the diversity of alleles and haplotypes of HLA class I loci
-
Cao, K. et al. Differentiation between African populations is evidenced by the diversity of alleles and haplotypes of HLA class I loci. Tissue Antigens 63, 293-325 (2004).
-
(2004)
Tissue Antigens
, vol.63
, pp. 293-325
-
-
Cao, K.1
-
109
-
-
0037165969
-
Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level
-
Moore, C. B. et al. Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level. Science 296, 1439-1443 (2002).
-
(2002)
Science
, vol.296
, pp. 1439-1443
-
-
Moore, C.B.1
-
110
-
-
0035913225
-
Evolution and transmission of stable CTL escape mutations in HIV infection
-
Goulder, P. J. et al. Evolution and transmission of stable CTL escape mutations in HIV infection. Nature 412, 334-338 (2001).
-
(2001)
Nature
, vol.412
, pp. 334-338
-
-
Goulder, P.J.1
-
111
-
-
1842741699
-
HIV evolution: CTL escape mutation and reversion after transmission
-
Leslie, A. J. et al. HIV evolution: CTL escape mutation and reversion after transmission. Nature Med. 10. 282-289 (2004).
-
(2004)
Nature Med.
, vol.10
, pp. 282-289
-
-
Leslie, A.J.1
-
112
-
-
33645240933
-
Fitness cost of escape mutations in p24 Gag in association with control of human immunodeficiency virus type 1
-
Martinez-Picado, J. et al. Fitness cost of escape mutations in p24 Gag in association with control of human immunodeficiency virus type 1. J. Virol. 80, 3617-3623 (2006).
-
(2006)
J. Virol.
, vol.80
, pp. 3617-3623
-
-
Martinez-Picado, J.1
-
113
-
-
33846546862
-
The fitness cost of CTL escape: Not a terrible hardship on HIV-1?
-
[online], (XVI International AIDS Conference, Toronto, Canada 13-18 August)
-
Troyer, R. M. et al. The fitness cost of CTL escape: Not a terrible hardship on HIV-1? [online], http://www.iasociety.org/abstract/ show.asp?abstract_id=2199593 (XVI International AIDS Conference, Toronto, Canada 13-18 August, 2006)
-
(2006)
-
-
Troyer, R.M.1
-
114
-
-
0037043699
-
Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein
-
Sheehy, A. M., Gaddis, N. C., Choi, J. D. & Malim, M. H. Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein. Nature 418, 646-650 (2002).
-
(2002)
Nature
, vol.418
, pp. 646-650
-
-
Sheehy, A.M.1
Gaddis, N.C.2
Choi, J.D.3
Malim, M.H.4
-
115
-
-
1542288934
-
The cytoplasmic body component TRIM5α restricts HIV-1 infection in Old World monkeys
-
Stremlau, M. et al. The cytoplasmic body component TRIM5α restricts HIV-1 infection in Old World monkeys. Nature 427, 848-853 (2004).
-
(2004)
Nature
, vol.427
, pp. 848-853
-
-
Stremlau, M.1
-
116
-
-
20144365751
-
Infection with multidrug resistant, dual-tropic HIV-1 and rapid progression to AIDS: A case report
-
Markowitz, M. et al. Infection with multidrug resistant, dual-tropic HIV-1 and rapid progression to AIDS: A case report. Lancet 365, 1031-1038 (2005).
-
(2005)
Lancet
, vol.365
, pp. 1031-1038
-
-
Markowitz, M.1
-
117
-
-
33646711470
-
Viral and host determinants of HIV-1 pathogenesis
-
Van de, P. P. Viral and host determinants of HIV-1 pathogenesis, AIDS 20, 933-934 (2006).
-
(2006)
AIDS
, vol.20
, pp. 933-934
-
-
Van de, P.P.1
-
118
-
-
33645753571
-
The integration hypothesis: An evolutionary pathway to benign SIV infection
-
Muller, V. & De Boer, R. J. The integration hypothesis: An evolutionary pathway to benign SIV infection. PLoS Pathog. 2, e15 (2006).
-
(2006)
PLoS Pathog.
, vol.2
-
-
Muller, V.1
De Boer, R.J.2
-
119
-
-
33646706853
-
Stable virulence levels in the HIV epidemic of Switzerland over two decades
-
Muller, V. et al. Stable virulence levels in the HIV epidemic of Switzerland over two decades. AIDS 20, 889-894 (2006).
-
(2006)
AIDS
, vol.20
, pp. 889-894
-
-
Muller, V.1
-
120
-
-
24644431897
-
Attenuation of HIV-1 infection by other microbial agents
-
Kannangara, S., DeSimone, J. A. & Pomerantz, R. J. Attenuation of HIV-1 infection by other microbial agents. J. Infect. Dis. 192, 1003-1009 (2005).
-
(2005)
J. Infect. Dis.
, vol.192
, pp. 1003-1009
-
-
Kannangara, S.1
DeSimone, J.A.2
Pomerantz, R.J.3
-
121
-
-
27144455019
-
Replicative fitness of historical and recent HIV-1 isolates suggests HIV-1 attenuation over time
-
Arien, K. K. et al. Replicative fitness of historical and recent HIV-1 isolates suggests HIV-1 attenuation over time. AIDS 19, 1555-1564 (2005).
-
(2005)
AIDS
, vol.19
, pp. 1555-1564
-
-
Arien, K.K.1
-
122
-
-
0033612928
-
Transmission of antiretroviral-drug-resistant HIV-1 variants
-
Yerly S. et al. Transmission of antiretroviral-drug-resistant HIV-1 variants. Lancet 354, 729-733 (1999).
-
(1999)
Lancet
, vol.354
, pp. 729-733
-
-
Yerly, S.1
-
123
-
-
33646788007
-
HIV transmission and primary drug resistance
-
Turner, D. & Wainberg, M. A. HIV transmission and primary drug resistance. AIDS Rev. 8, 17-23 (2006).
-
(2006)
AIDS Rev.
, vol.8
, pp. 17-23
-
-
Turner, D.1
Wainberg, M.A.2
-
124
-
-
0024635016
-
Test may predict which patients with HIV infection will develop AIDS
-
Eyster, M. E. Test may predict which patients with HIV infection will develop AIDS. Am. Fam. Physician 39, 276 (1989).
-
(1989)
Am. Fam. Physician
, vol.39
, pp. 276
-
-
Eyster, M.E.1
-
125
-
-
0035912232
-
+ T-cell depletion in HIV disease
-
+ T-cell depletion in HIV disease. Nature 410, 974-979 (2001).
-
(2001)
Nature
, vol.410
, pp. 974-979
-
-
McCune, J.M.1
-
126
-
-
0028102110
-
Reduced rate of disease development after HIV-2 infection as compared to HIV-1
-
Marlink, R. et al. Reduced rate of disease development after HIV-2 infection as compared to HIV-1. Science 265, 1587-1590 (1994).
-
(1994)
Science
, vol.265
, pp. 1587-1590
-
-
Marlink, R.1
-
127
-
-
0242608112
-
Factors associated with clinical progression in HIV-2 infected-patients: The French ANRS cohort
-
Matheron, S. et al. Factors associated with clinical progression in HIV-2 infected-patients: The French ANRS cohort. AIDS 17, 2593-2601 (2003).
-
(2003)
AIDS
, vol.17
, pp. 2593-2601
-
-
Matheron, S.1
-
128
-
-
0037470256
-
Comparison of HIV-1 and HIV-2 infectivity from a prospective cohort study in Senegal
-
Gilbert, P. B. et al. Comparison of HIV-1 and HIV-2 infectivity from a prospective cohort study in Senegal. Stat. Med. 22, 573-593 (2003).
-
(2003)
Stat. Med.
, vol.22
, pp. 573-593
-
-
Gilbert, P.B.1
-
129
-
-
0028198175
-
Slower heterosexual spread of HIV-2 than HIV-1
-
Kanki, P. J. et al. Slower heterosexual spread of HIV-2 than HIV-1. Lancet 343, 943-946 (1994).
-
(1994)
Lancet
, vol.343
, pp. 943-946
-
-
Kanki, P.J.1
-
130
-
-
0033257958
-
Human immunodeficiency viruses in the developing world
-
Essex, M. Human immunodeficiency viruses in the developing world. Adv. Virus Res. 53, 71-88 (1999).
-
(1999)
Adv. Virus Res.
, vol.53
, pp. 71-88
-
-
Essex, M.1
-
131
-
-
0028932927
-
HIV-1 subtype C in China
-
Luo, C. C. et al. HIV-1 subtype C in China. Lancet 345, 1051-1052 (1995).
-
(1995)
Lancet
, vol.345
, pp. 1051-1052
-
-
Luo, C.C.1
-
132
-
-
0034468391
-
A recent outbreak of human immunodeficiency virus type 1 infection in southern China was initiated by two highly homogeneous, geographically separated strains, circulating recombinant form AE and a novel BC recombinant
-
Piyasirisilp, S. et al. A recent outbreak of human immunodeficiency virus type 1 infection in southern China was initiated by two highly homogeneous, geographically separated strains, circulating recombinant form AE and a novel BC recombinant. J. Virol. 74, 11286-11295 (2000).
-
(2000)
J. Virol.
, vol.74
, pp. 11286-11295
-
-
Piyasirisilp, S.1
-
133
-
-
27944446919
-
HIV-1 subtype C dissemination in southern Brazil
-
Soares, E. A. et al. HIV-1 subtype C dissemination in southern Brazil. AIDS 19, S81-S86 (2005).
-
(2005)
AIDS
, vol.19
-
-
Soares, E.A.1
-
134
-
-
27944458372
-
Distribution of HIV-1 variants in the Democratic Republic of Congo suggests increase of subtype C in Kinshasa between 1997 and 2002
-
Vidal, N. et al. Distribution of HIV-1 variants in the Democratic Republic of Congo suggests increase of subtype C in Kinshasa between 1997 and 2002. J. Acquir. Immune. Defic. Syndr. 40, 456-462 (2005).
-
(2005)
J. Acquir. Immune. Defic. Syndr.
, vol.40
, pp. 456-462
-
-
Vidal, N.1
-
135
-
-
14544300506
-
Comparative population dynamics of HIV-1 subtypes B and C: Subtype-specific differences in patterns of epidemic growth
-
Walker, P. R., Pybus, O. G., Rambaut, A. & Holmes, E. C. Comparative population dynamics of HIV-1 subtypes B and C: Subtype-specific differences in patterns of epidemic growth. Infect. Genet. Evol. 5, 199-208 (2005).
-
(2005)
Infect. Genet. Evol.
, vol.5
, pp. 199-208
-
-
Walker, P.R.1
Pybus, O.G.2
Rambaut, A.3
Holmes, E.C.4
-
136
-
-
0035150940
-
Differences in perinatal transmission among human immunodeficiency virus type 1 genotypes
-
Renjifo, B. et al. Differences in perinatal transmission among human immunodeficiency virus type 1 genotypes. J. Hum. Virol. 4, 16-25 (2001).
-
(2001)
J. Hum. Virol.
, vol.4
, pp. 16-25
-
-
Renjifo, B.1
-
137
-
-
4143100219
-
Preferential in utero transmission of HIV-1 subtype C as compared to HIV-1 subtype A or D
-
Renjifo, B. et al. Preferential in utero transmission of HIV-1 subtype C as compared to HIV-1 subtype A or D. AIDS 18, 1629-1636 (2004).
-
(2004)
AIDS
, vol.18
, pp. 1629-1636
-
-
Renjifo, B.1
-
138
-
-
0043129073
-
Genetic diversity of HIV-1 in western Kenya: Subtype-specific differences in mother-to-child transmission
-
Yang, C. et al. Genetic diversity of HIV-1 in western Kenya: subtype-specific differences in mother-to-child transmission. AIDS 17, 1667-1674 (2003).
-
(2003)
AIDS
, vol.17
, pp. 1667-1674
-
-
Yang, C.1
-
139
-
-
23244440803
-
Comparison of mother-to-child transmission rates in Ugandan women with subtype A versus D HIV-1 who received single-dose nevirapine prophylaxis. HIV Network For Prevention Trials 012
-
Eshleman, S. H. et al. Comparison of mother-to-child transmission rates in Ugandan women with subtype A versus D HIV-1 who received single-dose nevirapine prophylaxis. HIV Network For Prevention Trials 012. J. Acquir. Immune. Defic. Syndr. 39, 593-597 (2005).
-
(2005)
J. Acquir. Immune. Defic. Syndr.
, vol.39
, pp. 593-597
-
-
Eshleman, S.H.1
-
140
-
-
0030820369
-
Human immunodeficiency virus type 1 strains of subtypes B and E replicate in cutaneous dendritic cell-T-cell mixtures without displaying subtype-specific tropism
-
Pope, M. et al. Human immunodeficiency virus type 1 strains of subtypes B and E replicate in cutaneous dendritic cell-T-cell mixtures without displaying subtype-specific tropism. J. Virol. 71, 8001-8007 (1997).
-
(1997)
J. Virol.
, vol.71
, pp. 8001-8007
-
-
Pope, M.1
-
141
-
-
0030768770
-
Langerhans cell tropism of human immunodeficiency virus type 1 subtype A through F isolates derived from different transmission groups
-
Dittmar, M. T. et al. Langerhans cell tropism of human immunodeficiency virus type 1 subtype A through F isolates derived from different transmission groups. J. Virol. 71, 8008-8013 (1997).
-
(1997)
J. Virol.
, vol.71
, pp. 8008-8013
-
-
Dittmar, M.T.1
-
142
-
-
2642533575
-
The changing molecular epidemiology of HIV type 1 among northern Thai drug users, 1999 to 2002
-
Tovanabutra, S. et al. The changing molecular epidemiology of HIV type 1 among northern Thai drug users, 1999 to 2002. AIDS Res. Hum. Retroviruses. 20, 465-475 (2004).
-
(2004)
AIDS Res. Hum. Retroviruses.
, vol.20
, pp. 465-475
-
-
Tovanabutra, S.1
-
143
-
-
0031466811
-
Expression and function of CCR5 and CXCR4 on human Langerhans cells and macrophages: Implications for HIV primary infection
-
Zaitseva, M. et al. Expression and function of CCR5 and CXCR4 on human Langerhans cells and macrophages: Implications for HIV primary infection. Nature Med. 3, 1369-1375 (1997).
-
(1997)
Nature Med.
, vol.3
, pp. 1369-1375
-
-
Zaitseva, M.1
-
144
-
-
21644472626
-
The replicative fitness of primary human immunodeficiency virus type 1 (HIV-1) group M, HIV-1 group O, and HIV-2 isolates
-
Arien, K. K. et al. The replicative fitness of primary human immunodeficiency virus type 1 (HIV-1) group M, HIV-1 group O, and HIV-2 isolates. J. Virol. 79, 8979-8990 (2005).
-
(2005)
J. Virol.
, vol.79
, pp. 8979-8990
-
-
Arien, K.K.1
-
145
-
-
0038805436
-
High frequency of syncytium-inducing and CXCR4-tropic viruses among human immunodeficiency virus type 1 subtype C-infected patients receiving antiretroviral treatment
-
Johnston, E. R. et al. High frequency of syncytium-inducing and CXCR4-tropic viruses among human immunodeficiency virus type 1 subtype C-infected patients receiving antiretroviral treatment. J. Virol. 77, 7682-7688 (2003).
-
(2003)
J. Virol.
, vol.77
, pp. 7682-7688
-
-
Johnston, E.R.1
-
146
-
-
0024817947
-
Networks of sexual contacts: Implications for the pattern of spread of HIV
-
Gupta, S., Anderson, R. M. & May, R. M. Networks of sexual contacts: implications for the pattern of spread of HIV. AIDS 3, 807-817 (1989).
-
(1989)
AIDS
, vol.3
, pp. 807-817
-
-
Gupta, S.1
Anderson, R.M.2
May, R.M.3
-
147
-
-
0024954014
-
The influence of different sexual-contact patterns between age classes on the predicted demographic impact of AIDS in developing countries
-
Anderson, R. M., Ng, T. W., Boily, M. C. & May, R. M. The influence of different sexual-contact patterns between age classes on the predicted demographic impact of AIDS in developing countries. Ann. N. Y. Acad. Sci. 569, 240-274 (1989).
-
(1989)
Ann. N. Y. Acad. Sci.
, vol.569
, pp. 240-274
-
-
Anderson, R.M.1
Ng, T.W.2
Boily, M.C.3
May, R.M.4
-
148
-
-
2142810214
-
Acute HIV revisited: New opportunities for treatment and prevention
-
Pilcher, C. D., Eron, J. J. Jr, Galvin, S., Gay, C. & Cohen, M. S. Acute HIV revisited: New opportunities for treatment and prevention. J. Clin. Invest. 113, 937-945 (2004).
-
(2004)
J. Clin. Invest.
, vol.113
, pp. 937-945
-
-
Pilcher, C.D.1
Eron Jr., J.J.2
Galvin, S.3
Gay, C.4
Cohen, M.S.5
-
149
-
-
0028170791
-
Role of the primary infection in epidemics of HIV infection in gay cohorts
-
Jacquez, J. A., Koopman, J. S., Simon, C. P. & Longini, I. M. Jr. Role of the primary infection in epidemics of HIV infection in gay cohorts. J. Acquir. Immune. Defic. Syndr. 7, 1169-1184 (1994).
-
(1994)
J. Acquir. Immune. Defic. Syndr.
, vol.7
, pp. 1169-1184
-
-
Jacquez, J.A.1
Koopman, J.S.2
Simon, C.P.3
Longini Jr., I.M.4
-
150
-
-
0031001934
-
The role of early HIV infection in the spread of HIV through populations
-
Koopman, J. S. et al. The role of early HIV infection in the spread of HIV through populations. J. Acquir. Immune. Defic. Syndr. Hum. Retrovirol. 14, 249-258 (1997).
-
(1997)
J. Acquir. Immune. Defic. Syndr. Hum. Retrovirol.
, vol.14
, pp. 249-258
-
-
Koopman, J.S.1
-
151
-
-
0035168252
-
Infectious simian/human immunodeficiency virus with human immunodeficiency virus type 1 subtype C from an African isolate: Rhesus macaque model
-
Ndung'u, T. et al. Infectious simian/human immunodeficiency virus with human immunodeficiency virus type 1 subtype C from an African isolate: rhesus macaque model. J. Virol. 75, 11417-11425 (2001).
-
(2001)
J. Virol.
, vol.75
, pp. 11417-11425
-
-
Ndung'u, T.1
-
152
-
-
20944442196
-
+ T cell counts in subtype C human immunodeficiency virus type 1-infected individuals from southern Africa
-
+ T cell counts in subtype C human immunodeficiency virus type 1-infected individuals from southern Africa. AIDS Res. Hum. Retroviruses 21, 285-291 (2005).
-
(2005)
AIDS Res. Hum. Retroviruses
, vol.21
, pp. 285-291
-
-
Gray, C.M.1
-
153
-
-
0032946954
-
Subtypes of human immunodeficiency virus type 1 and disease stage among women in Nairobi, Kenya
-
Neilson, J. R. et al. Subtypes of human immunodeficiency virus type 1 and disease stage among women in Nairobi, Kenya. J. Virol. 73, 4393-4403 (1999).
-
(1999)
J. Virol.
, vol.73
, pp. 4393-4403
-
-
Neilson, J.R.1
-
154
-
-
0036569329
-
Effect of human immunodeficiency virus (HIV) type 1 envelope subtypes A and D on disease progression in a large cohort of HIV-1-positive persons in Uganda
-
Kaleebu, P. et al. Effect of human immunodeficiency virus (HIV) type 1 envelope subtypes A and D on disease progression in a large cohort of HIV-1-positive persons in Uganda. J. Infect. Dis. 185, 1244-1250 (2002).
-
(2002)
J. Infect. Dis.
, vol.185
, pp. 1244-1250
-
-
Kaleebu, P.1
-
155
-
-
33644840404
-
Different rates of disease progression of HIV type 1 infection in Tanzania based on infecting subtype
-
Vasan, A. et al. Different rates of disease progression of HIV type 1 infection in Tanzania based on infecting subtype. Clin. Infect. Dis. 42, 843-852 (2006).
-
(2006)
Clin. Infect. Dis.
, vol.42
, pp. 843-852
-
-
Vasan, A.1
-
156
-
-
0035895662
-
Relationship between HIV-1 Env subtypes A and D and disease progression in a rural Ugandan cohort
-
Kaleebu, P. et al. Relationship between HIV-1 Env subtypes A and D and disease progression in a rural Ugandan cohort. AIDS 15, 293-299 (2001).
-
(2001)
AIDS
, vol.15
, pp. 293-299
-
-
Kaleebu, P.1
-
157
-
-
33646859439
-
Genotypic and phenotypic characterization of viral isolates from HIV-1 subtype C-infected children with slow and rapid disease progression
-
Choge, I. et al. Genotypic and phenotypic characterization of viral isolates from HIV-1 subtype C-infected children with slow and rapid disease progression. AIDS Res. Hum. Retroviruses 22, 458-465 (2006).
-
(2006)
AIDS Res. Hum. Retroviruses
, vol.22
, pp. 458-465
-
-
Choge, I.1
-
158
-
-
5644247549
-
The relationship between HIV type 1 disease progression and V3 serotype in a rural Ugandan cohort
-
Senkaali, D. et al. The relationship between HIV type 1 disease progression and V3 serotype in a rural Ugandan cohort. AIDS Res. Hum. Retroviruses 20, 932-937 (2004).
-
(2004)
AIDS Res. Hum. Retroviruses
, vol.20
, pp. 932-937
-
-
Senkaali, D.1
-
159
-
-
33846487706
-
Infection with subtype C HIV-1 of lower replicative fitness as compared to subtypes A and D leads to slower disease progression in Zimbabwean and Ugandan women
-
[online], (XVI International AIDS Conference, Toronto, Canada 13-18 August)
-
Arts, E. J. et al. Infection with subtype C HIV-1 of lower replicative fitness as compared to subtypes A and D leads to slower disease progression in Zimbabwean and Ugandan women. [online], http://www.iasociety.org/abstract/show.asp?abstract_id=2199440 (XVI International AIDS Conference, Toronto, Canada 13-18 August, 2006).
-
(2006)
-
-
Arts, E.J.1
-
160
-
-
0034040118
-
Reservoirs for HIV-1: Mechanisms for viral persistence in the presence of antiviral immune responses and antiretroviral therapy
-
Pierson, T., McArthur, J. & Siliciano, R. F. Reservoirs for HIV-1: mechanisms for viral persistence in the presence of antiviral immune responses and antiretroviral therapy. Annu. Rev. Immunol. 18, 665-708 (2000).
-
(2000)
Annu. Rev. Immunol.
, vol.18
, pp. 665-708
-
-
Pierson, T.1
McArthur, J.2
Siliciano, R.F.3
-
161
-
-
14444273439
-
Identification of a reservoir for HIV-1 in patients on highly active antiretroviral therapy
-
Finzi, D. et al. Identification of a reservoir for HIV-1 in patients on highly active antiretroviral therapy. Science 278, 1295-1300 (1997).
-
(1997)
Science
, vol.278
, pp. 1295-1300
-
-
Finzi, D.1
-
162
-
-
0030321910
-
Study on the distribution HIV-1 C subtype in Ruili and other counties, Yunnan, China (Translation)
-
Li, D. Q., Zheng, X. W. & Zhang, G. Y. Study on the distribution HIV-1 C subtype in Ruili and other counties, Yunnan, China (Translation). Zhonghua Liu Xing. Bing. Xue. Za Zhi. 17, 337-339 (1996).
-
(1996)
Zhonghua Liu Xing. Bing. Xue. Za Zhi.
, vol.17
, pp. 337-339
-
-
Li, D.Q.1
Zheng, X.W.2
Zhang, G.Y.3
-
163
-
-
28944434761
-
Molecular epidemiology of the heterosexual HIV-1 transmission in Kunming, Yunnan Province of China suggests origin from the local IDU epidemic
-
Li, X. J. et al. Molecular epidemiology of the heterosexual HIV-1 transmission in Kunming, Yunnan Province of China suggests origin from the local IDU epidemic. AIDS Res. Hum. Retroviruses 21, 977-980 (2005).
-
(2005)
AIDS Res. Hum. Retroviruses
, vol.21
, pp. 977-980
-
-
Li, X.J.1
-
164
-
-
0033045487
-
A predominantly HIV type 1 subtype C-restricted epidemic in South African urban populations
-
Van Harmelen, J. H. et al. A predominantly HIV type 1 subtype C-restricted epidemic in South African urban populations. AIDS Res. Hum. Retroviruses 15, 395-398 (1999).
-
(1999)
AIDS Res. Hum. Retroviruses
, vol.15
, pp. 395-398
-
-
Van Harmelen, J.H.1
-
165
-
-
30344438528
-
No evidence for rapid subtype c spread within an epidemic in which multiple subtypes and intersubtype recombinants circulate
-
Rainwater, S. et al. No evidence for rapid subtype c spread within an epidemic in which multiple subtypes and intersubtype recombinants circulate. AIDS Res. Hum. Retroviruses 21, 1060-1065 (2005).
-
(2005)
AIDS Res. Hum. Retroviruses
, vol.21
, pp. 1060-1065
-
-
Rainwater, S.1
|