메뉴 건너뛰기




Volumn 24, Issue 3, 2004, Pages 1387-1400

RNA Folding Affects the Recruitment of SR Proteins by Mouse and Human Polypurinic Enhancer Elements in the Fibronectin EDA Exon

Author keywords

[No Author keywords available]

Indexed keywords

FIBRONECTIN; PURINE DERIVATIVE; RNA; RNA BINDING PROTEIN; SR PROTEIN; UNCLASSIFIED DRUG;

EID: 1642458353     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.24.3.1387-1400.2004     Document Type: Article
Times cited : (103)

References (71)
  • 1
    • 0029890441 scopus 로고    scopus 로고
    • Biochemistry and regulation of pre-mRNA splicing
    • Adams, M. D., D. Z. Rudner, and D. C. Rio. 1996. Biochemistry and regulation of pre-mRNA splicing. Curr. Opin. Cell Biol. 8:331-339.
    • (1996) Curr. Opin. Cell Biol. , vol.8 , pp. 331-339
    • Adams, M.D.1    Rudner, D.Z.2    Rio, D.C.3
  • 2
    • 0027570147 scopus 로고
    • Pre-mRNA secondary structure and the regulation of splicing
    • Balvay, L., D. Libri, and M. Y. Fiszman. 1993. Pre-mRNA secondary structure and the regulation of splicing. Bioessays 15:165-169.
    • (1993) Bioessays , vol.15 , pp. 165-169
    • Balvay, L.1    Libri, D.2    Fiszman, M.Y.3
  • 3
    • 0026062392 scopus 로고
    • Does steric interference between splice sites block the splicing of a short c-src neuron-specific exon in non-neuronal cells?
    • Black, D. L. 1991. Does steric interference between splice sites block the splicing of a short c-src neuron-specific exon in non-neuronal cells? Genes Dev. 5:389-402.
    • (1991) Genes Dev. , vol.5 , pp. 389-402
    • Black, D.L.1
  • 4
    • 0030961869 scopus 로고    scopus 로고
    • A highly stable duplex structure sequesters the 5′ splice site region of hnRNP A1 alternative exon 7B
    • Blanchette, M., and B. Chabot. 1997. A highly stable duplex structure sequesters the 5′ splice site region of hnRNP A1 alternative exon 7B. RNA 3:405-419.
    • (1997) RNA , vol.3 , pp. 405-419
    • Blanchette, M.1    Chabot, B.2
  • 5
    • 0034161419 scopus 로고    scopus 로고
    • Exonic splicing enhancers: Mechanism of action, diversity and role in human genetic diseases
    • Blencowe, B. J. 2000. Exonic splicing enhancers: mechanism of action, diversity and role in human genetic diseases. Trends Biochem. Sci. 25:106-110.
    • (2000) Trends Biochem. Sci. , vol.25 , pp. 106-110
    • Blencowe, B.J.1
  • 6
    • 0035965309 scopus 로고    scopus 로고
    • Characterization and functional implications of the RNA binding properties of nuclear factor TDP-43, a novel splicing regulator of CFTR exon 9
    • Buratti, E., and F. E. Baralle. 2001. Characterization and functional implications of the RNA binding properties of nuclear factor TDP-43, a novel splicing regulator of CFTR exon 9. J. Biol. Chem. 276:36337-36343.
    • (2001) J. Biol. Chem. , vol.276 , pp. 36337-36343
    • Buratti, E.1    Baralle, F.E.2
  • 7
    • 0035794665 scopus 로고    scopus 로고
    • Nuclear factor TDP-43 and SR proteins promote in vitro and in vivo CFTR exon 9 skipping
    • Buratti, E., T. Dork, E. Zuccato, F. Pagani, M. Romano, and F. E. Baralle. 2001. Nuclear factor TDP-43 and SR proteins promote in vitro and in vivo CFTR exon 9 skipping. EMBO J. 20:1774-1784.
    • (2001) EMBO J. , vol.20 , pp. 1774-1784
    • Buratti, E.1    Dork, T.2    Zuccato, E.3    Pagani, F.4    Romano, M.5    Baralle, F.E.6
  • 8
    • 0036534129 scopus 로고    scopus 로고
    • Alternative splicing: Multiple control mechanisms and involvement in human disease
    • Caceres, J. F., and A. R. Kornblihtt. 2002. Alternative splicing: multiple control mechanisms and involvement in human disease. Trends Genet. 18:186-193.
    • (2002) Trends Genet. , vol.18 , pp. 186-193
    • Caceres, J.F.1    Kornblihtt, A.R.2
  • 9
    • 0029086215 scopus 로고
    • Analysis of the linkage between fibronectin alternative spliced sites during ageing in rat tissues
    • Caputi, M., F. E. Baralle, and C. A. Melo. 1995. Analysis of the linkage between fibronectin alternative spliced sites during ageing in rat tissues. Biochim. Biophys. Acta 1263:53-59.
    • (1995) Biochim. Biophys. Acta , vol.1263 , pp. 53-59
    • Caputi, M.1    Baralle, F.E.2    Melo, C.A.3
  • 10
    • 0028232359 scopus 로고
    • A novel bipartite splicing enhancer modulates the differential processing of the human fibronectin EDA exon
    • Caputi, M., G. Casari, S. Guenzi, R. Tagliabue, A. Sidoli, C. A. Melo, and F. E. Baralle. 1994. A novel bipartite splicing enhancer modulates the differential processing of the human fibronectin EDA exon. Nucleic Acids Res. 22:1018-1022.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 1018-1022
    • Caputi, M.1    Casari, G.2    Guenzi, S.3    Tagliabue, R.4    Sidoli, A.5    Melo, C.A.6    Baralle, F.E.7
  • 11
    • 0037099302 scopus 로고    scopus 로고
    • A nonsense mutation in the fibrillin-1 gene of a Marfan syndrome patient induces NMD and disrupts an exonic splicing enhancer
    • Caputi, M., R. J. Kendzior, Jr., and K. L. Beemon. 2002. A nonsense mutation in the fibrillin-1 gene of a Marfan syndrome patient induces NMD and disrupts an exonic splicing enhancer. Genes Dev. 16:1754-1759.
    • (2002) Genes Dev. , vol.16 , pp. 1754-1759
    • Caputi, M.1    Kendzior Jr., R.J.2    Beemon, K.L.3
  • 12
    • 0028952453 scopus 로고
    • Regulation of fibronectin expression in rat regenerating liver
    • Caputi, M., C. A. Melo, and F. E. Baralle. 1995. Regulation of fibronectin expression in rat regenerating liver. Nucleic Acids Res. 23:238-243.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 238-243
    • Caputi, M.1    Melo, C.A.2    Baralle, F.E.3
  • 13
    • 0036207384 scopus 로고    scopus 로고
    • Listening to silence and understanding nonsense: Exonic mutations that affect splicing
    • Cartegni, L., S. L. Chew, and A. R. Krainer. 2002. Listening to silence and understanding nonsense: exonic mutations that affect splicing. Nat. Rev. Genet. 3:285-298.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 285-298
    • Cartegni, L.1    Chew, S.L.2    Krainer, A.R.3
  • 14
    • 0036544654 scopus 로고    scopus 로고
    • Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1
    • Cartegni, L., and A. R. Krainer. 2002. Disruption of an SF2/ ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1. Nat. Genet. 30:377-384.
    • (2002) Nat. Genet. , vol.30 , pp. 377-384
    • Cartegni, L.1    Krainer, A.R.2
  • 15
    • 0042242582 scopus 로고    scopus 로고
    • ESEfinder: A web resource to identify exonic splicing enhancers
    • Cartegni, L., J. Wang, Z. Zhu, M. Q. Zhang, and A. R. Krainer. 2003. ESEfinder: a web resource to identify exonic splicing enhancers. Nucleic Acids Res. 31:3568-3571.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3568-3571
    • Cartegni, L.1    Wang, J.2    Zhu, Z.3    Zhang, M.Q.4    Krainer, A.R.5
  • 16
    • 0033634948 scopus 로고    scopus 로고
    • Multisite RNA binding and release of polypyrimidine tract binding protein during the regulation of c-src neural-specific splicing
    • Chou, M. Y., J. G. Underwood, J. Nikolic, M. H. Luu, and D. L. Black. 2000. Multisite RNA binding and release of polypyrimidine tract binding protein during the regulation of c-src neural-specific splicing. Mol. Cell 5:949-957.
    • (2000) Mol. Cell , vol.5 , pp. 949-957
    • Chou, M.Y.1    Underwood, J.G.2    Nikolic, J.3    Luu, M.H.4    Black, D.L.5
  • 18
    • 0032506168 scopus 로고    scopus 로고
    • RNA secondary structure: An important cis-element in rat calcitonin/CGRP pre-messenger RNA splicing
    • Coleman, T. P., and J. R. Roesser. 1998. RNA secondary structure: an important cis-element in rat calcitonin/CGRP pre-messenger RNA splicing. Biochemistry 37:15941-15950.
    • (1998) Biochemistry , vol.37 , pp. 15941-15950
    • Coleman, T.P.1    Roesser, J.R.2
  • 19
    • 0033180615 scopus 로고    scopus 로고
    • Coupling of transcription with alternative splicing: RNA pol 11 promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer
    • Cramer, P., J. F. Caceres, D. Cazalla, S. Kadener, A. F. Muro, F. E. Baralle, and A. R. Kornblihtt. 1999. Coupling of transcription with alternative splicing: RNA pol 11 promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer. Mol. Cell 4:251-258.
    • (1999) Mol. Cell , vol.4 , pp. 251-258
    • Cramer, P.1    Caceres, J.F.2    Cazalla, D.3    Kadener, S.4    Muro, A.F.5    Baralle, F.E.6    Kornblihtt, A.R.7
  • 20
    • 0036849108 scopus 로고    scopus 로고
    • hnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure
    • Damgaard, C. K., T. O. Tange, and J. Kjems. 2002. hnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure. RNA 8:1401-1415.
    • (2002) RNA , vol.8 , pp. 1401-1415
    • Damgaard, C.K.1    Tange, T.O.2    Kjems, J.3
  • 21
    • 0030802124 scopus 로고    scopus 로고
    • Multiple interdependent sequence elements control splicing of a fibroblast growth factor receptor 2 alternative exon
    • Del Gatto, F., A. Plet, M. C. Gesnel, C. Fort, and R. Breathnach. 1997. Multiple interdependent sequence elements control splicing of a fibroblast growth factor receptor 2 alternative exon. Mol. Cell. Biol. 17:5106-5116.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 5106-5116
    • Del Gatto, F.1    Plet, A.2    Gesnel, M.C.3    Fort, C.4    Breathnach, R.5
  • 22
    • 0026755181 scopus 로고
    • A native RNA secondary structure controls alternative splice-site selection and generates two human growth hormone isoforms
    • Estes, P. A., N. E. Cooke, and S. A. Liebhaber. 1992. A native RNA secondary structure controls alternative splice-site selection and generates two human growth hormone isoforms. J. Biol. Chem. 267:14902-14908.
    • (1992) J. Biol. Chem. , vol.267 , pp. 14902-14908
    • Estes, P.A.1    Cooke, N.E.2    Liebhaber, S.A.3
  • 23
    • 0037443035 scopus 로고    scopus 로고
    • Pre-mRNA splicing and human disease
    • Faustino, N. A., and T. A. Cooper. 2003. Pre-mRNA splicing and human disease. Genes Dev. 17:419-437.
    • (2003) Genes Dev. , vol.17 , pp. 419-437
    • Faustino, N.A.1    Cooper, T.A.2
  • 24
    • 0028875886 scopus 로고
    • Alternative splicing of fibronectin-many different proteins but few different functions
    • Ffrench-Constant, C. 1995. Alternative splicing of fibronectin-many different proteins but few different functions. Exp. Cell Res. 221:261-271.
    • (1995) Exp. Cell Res. , vol.221 , pp. 261-271
    • Ffrench-Constant, C.1
  • 25
    • 0037271322 scopus 로고    scopus 로고
    • Cross-species sequence comparisons: A review of methods and available resources
    • Frazer, K. A., L. Elnitski, D. M. Church, I. Dubchak, and R. C. Hardison. 2003. Cross-species sequence comparisons: a review of methods and available resources. Genome Res. 13:1-12.
    • (2003) Genome Res. , vol.13 , pp. 1-12
    • Frazer, K.A.1    Elnitski, L.2    Church, D.M.3    Dubchak, I.4    Hardison, R.C.5
  • 26
    • 0025787954 scopus 로고
    • Biochemical mechanisms of constitutive and regulated pre-mRNA splicing
    • Green, M. R. 1991. Biochemical mechanisms of constitutive and regulated pre-mRNA splicing. Annu. Rev. Cell Biol. 7:559-599.
    • (1991) Annu. Rev. Cell Biol. , vol.7 , pp. 559-599
    • Green, M.R.1
  • 27
    • 0033591225 scopus 로고    scopus 로고
    • 5′ splice site mutations in tau associated with the inherited dementia FTDP-17 affect a stem-loop structure that regulates alternative splicing of exon 10
    • Grover, A., H. Houlden, M. Baker, J. Adamson, J. Lewis, G. Prihar, S. Pickering-Brown, K. Duff, and M. Hutton. 1999. 5′ splice site mutations in tau associated with the inherited dementia FTDP-17 affect a stem-loop structure that regulates alternative splicing of exon 10. J. Biol. Chem. 274:15134-15143.
    • (1999) J. Biol. Chem. , vol.274 , pp. 15134-15143
    • Grover, A.1    Houlden, H.2    Baker, M.3    Adamson, J.4    Lewis, J.5    Prihar, G.6    Pickering-Brown, S.7    Duff, K.8    Hutton, M.9
  • 28
    • 0029853580 scopus 로고    scopus 로고
    • Structural and functional conservation of the Drosophila doublesex splicing enhancer repeat elements
    • Hertel, K. J., K. W. Lynch, E. C. Hsiao, E. H. Liu, and T. Maniatis. 1996. Structural and functional conservation of the Drosophila doublesex splicing enhancer repeat elements. RNA 2:969-981.
    • (1996) RNA , vol.2 , pp. 969-981
    • Hertel, K.J.1    Lynch, K.W.2    Hsiao, E.C.3    Liu, E.H.4    Maniatis, T.5
  • 29
    • 0028308631 scopus 로고
    • Regulation of alternative pre-mRNA splicing by a novel repeated hexanucleotide element
    • Huh, G. S., and R. O. Hynes. 1994. Regulation of alternative pre-mRNA splicing by a novel repeated hexanucleotide element. Genes Dev. 8:1561-1574.
    • (1994) Genes Dev. , vol.8 , pp. 1561-1574
    • Huh, G.S.1    Hynes, R.O.2
  • 30
    • 0035863847 scopus 로고    scopus 로고
    • Conserved stem-loop structures in the HIV-1 RNA region containing the A3 3′ splice site and its cis-regulatory element: Possible involvement in RNA splicing
    • Jacquenet, S., D. Ropers, P. S. Bilodeau, L. Damier, A. Mougin, C. M. Stoltzfus, and C. Branlant. 2001. Conserved stem-loop structures in the HIV-1 RNA region containing the A3 3′ splice site and its cis-regulatory element: possible involvement in RNA splicing. Nucleic Acids Res. 29:464-478.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 464-478
    • Jacquenet, S.1    Ropers, D.2    Bilodeau, P.S.3    Damier, L.4    Mougin, A.5    Stoltzfus, C.M.6    Branlant, C.7
  • 31
    • 0034073995 scopus 로고    scopus 로고
    • Aberrant splicing of tau pre-mRNA caused by intronic mutations associated with the inherited dementia frontotemporal dementia with parkinsonism linked to chromosome 17
    • Jiang, Z., J. Cote, J. M. Kwon, A. M. Goate, and J. Y. Wu. 2000. Aberrant splicing of tau pre-mRNA caused by intronic mutations associated with the inherited dementia frontotemporal dementia with parkinsonism linked to chromosome 17. Mol. Cell. Biol. 20:4036-4048.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 4036-4048
    • Jiang, Z.1    Cote, J.2    Kwon, J.M.3    Goate, A.M.4    Wu, J.Y.5
  • 32
    • 0029991350 scopus 로고    scopus 로고
    • Transfecting mammalian cells: Optimization of critical parameters affecting calcium-phosphate precipitate formation
    • Jordan, M., A. Schallhorn, and F. M. Wurm. 1996. Transfecting mammalian cells: optimization of critical parameters affecting calcium-phosphate precipitate formation. Nucleic Acids Res. 24:596-601.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 596-601
    • Jordan, M.1    Schallhorn, A.2    Wurm, F.M.3
  • 33
    • 0037062415 scopus 로고    scopus 로고
    • Regulation of alternative splicing by a transcriptional enhancer through RNA pol 11 elongation
    • Kadener, S., J. P. Fededa, M. Rosbash, and A. R. Kornblihtt. 2002. Regulation of alternative splicing by a transcriptional enhancer through RNA pol 11 elongation. Proc. Natl. Acad. Sci. USA 99:8185-8190.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 8185-8190
    • Kadener, S.1    Fededa, J.P.2    Rosbash, M.3    Kornblihtt, A.R.4
  • 34
    • 0041665176 scopus 로고    scopus 로고
    • A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy
    • Kashima, T., and J. L. Manley. 2003. A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy. Nat. Genet. 34:460-463.
    • (2003) Nat. Genet. , vol.34 , pp. 460-463
    • Kashima, T.1    Manley, J.L.2
  • 35
    • 0141519339 scopus 로고    scopus 로고
    • Widespread selection for local RNA secondary structure in coding regions of bacterial genes
    • Katz, L., and C. B. Burge. 2003. Widespread selection for local RNA secondary structure in coding regions of bacterial genes. Genome Res. 13:2042-2051.
    • (2003) Genome Res. , vol.13 , pp. 2042-2051
    • Katz, L.1    Burge, C.B.2
  • 36
    • 0030266993 scopus 로고    scopus 로고
    • RNA structure and the regulation of gene expression
    • Klaff, P., D. Riesner, and G. Steger. 1996. RNA structure and the regulation of gene expression. Plant Mol. Biol. 32:89-106.
    • (1996) Plant Mol. Biol. , vol.32 , pp. 89-106
    • Klaff, P.1    Riesner, D.2    Steger, G.3
  • 37
    • 0022102304 scopus 로고
    • Primary structure of human fibronectin: Differential splicing may generate at least 10 polypeptides from a single gene
    • Kornblihtt, A. R., K. Umezawa, K. Vibe-Pedersen, and F. E. Baralle. 1985. Primary structure of human fibronectin: differential splicing may generate at least 10 polypeptides from a single gene. EMBO J. 4:1755-1759.
    • (1985) EMBO J. , vol.4 , pp. 1755-1759
    • Kornblihtt, A.R.1    Umezawa, K.2    Vibe-Pedersen, K.3    Baralle, F.E.4
  • 39
    • 0033214806 scopus 로고    scopus 로고
    • Accurate selection of a 5′ splice site requires sequences within libronectin alternative exon B
    • Kuo, B. A., and P. A. Norton. 1999. Accurate selection of a 5′ splice site requires sequences within libronectin alternative exon B. Nucleic Acids Res. 27:3945-3952.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 3945-3952
    • Kuo, B.A.1    Norton, P.A.2
  • 40
    • 0035986584 scopus 로고    scopus 로고
    • Alternative splicing during chondrogenesis: Modulation of fibronectin exon EIIIA splicing by SR proteins
    • Kuo, B. A., T. M. Uporova, H. Liang, V. D. Bennett, R. S. Tuan, and P. A. Norton. 2002. Alternative splicing during chondrogenesis: modulation of fibronectin exon EIIIA splicing by SR proteins. J. Cell. Biochem. 86:45-55.
    • (2002) J. Cell. Biochem. , vol.86 , pp. 45-55
    • Kuo, B.A.1    Uporova, T.M.2    Liang, H.3    Bennett, V.D.4    Tuan, R.S.5    Norton, P.A.6
  • 41
    • 0027668951 scopus 로고
    • The spliceosome
    • Lamond, A. I. 1993. The spliceosome. Bioessays 15:595-603.
    • (1993) Bioessays , vol.15 , pp. 595-603
    • Lamond, A.I.1
  • 42
    • 0027143943 scopus 로고
    • A splicing enhancer in the human fibronectin alternate ED1 exon interacts with SR proteins and stimulates U2 snRNP binding
    • Lavigueur, A., H. La Branche, A. R. Kornblihtt, and B. Chabot. 1993. A splicing enhancer in the human fibronectin alternate ED1 exon interacts with SR proteins and stimulates U2 snRNP binding. Genes Dev. 7:2405-2417.
    • (1993) Genes Dev. , vol.7 , pp. 2405-2417
    • Lavigueur, A.1    La Branche, H.2    Kornblihtt, A.R.3    Chabot, B.4
  • 43
    • 0025806969 scopus 로고
    • Tissue-specific splicing in vivo of the beta-tropomyosin gene: Dependence on an RNA secondary structure
    • Lihri, D., A. Piseri, and M. Y. Fiszman. 1991. Tissue-specific splicing in vivo of the beta-tropomyosin gene: dependence on an RNA secondary structure. Science 252:1842-1845.
    • (1991) Science , vol.252 , pp. 1842-1845
    • Lihri, D.1    Piseri, A.2    Fiszman, M.Y.3
  • 44
    • 0035158730 scopus 로고    scopus 로고
    • A mechanism for exon skipping caused by nonsense or missense mutations in BRCA1 and other genes
    • Liu, H. X., L. Cartegni, M. Q. Zhang, and A. R. Krainer. 2001. A mechanism for exon skipping caused by nonsense or missense mutations in BRCA1 and other genes. Nat. Genet. 27:55-58.
    • (2001) Nat. Genet. , vol.27 , pp. 55-58
    • Liu, H.X.1    Cartegni, L.2    Zhang, M.Q.3    Krainer, A.R.4
  • 45
    • 0028878235 scopus 로고
    • Effects of secondary structure on pre-mRNA splicing: Hairpins sequestering the 5′ but not the 3′ splice site inhibit intron processing in Nicotiana plumbaginifolia
    • Liu, H. X., G. J. Goodall, R. Kole, and W. Filipowicz. 1995. Effects of secondary structure on pre-mRNA splicing: hairpins sequestering the 5′ but not the 3′ splice site inhibit intron processing in Nicotiana plumbaginifolia. EMBO J. 14:377-388.
    • (1995) EMBO J. , vol.14 , pp. 377-388
    • Liu, H.X.1    Goodall, G.J.2    Kole, R.3    Filipowicz, W.4
  • 46
    • 0036785546 scopus 로고    scopus 로고
    • A secondary structure that contains the 5′ and 3′ splice sites suppresses splicing of duck hepatitis B virus pregenomic RNA
    • Loeb, D. D., A. A. Mack, and R. Tian. 2002. A secondary structure that contains the 5′ and 3′ splice sites suppresses splicing of duck hepatitis B virus pregenomic RNA. J. Virol. 76:10195-10202.
    • (2002) J. Virol. , vol.76 , pp. 10195-10202
    • Loeb, D.D.1    Mack, A.A.2    Tian, R.3
  • 47
    • 0029779356 scopus 로고    scopus 로고
    • Fibronectin mRNA splice variant in articular cartilage lacks bases encoding the V, III-15, and I-10 protein segments
    • MacLeod, J. N., N. Burton-Wurster, D. N. Gu, and G. Lust. 1996. Fibronectin mRNA splice variant in articular cartilage lacks bases encoding the V, III-15, and I-10 protein segments. J. Biol. Chem. 271:18954-18960.
    • (1996) J. Biol. Chem. , vol.271 , pp. 18954-18960
    • MacLeod, J.N.1    Burton-Wurster, N.2    Gu, D.N.3    Lust, G.4
  • 48
    • 0026567273 scopus 로고
    • Partial deletion of a dystrophin gene leads to exon skipping and to loss of an intra-exon hairpin structure from the predicted mRNA precursor
    • Matsuo, M., H. Nishio, Y. Kitoh, U. Francke, and H. Nakamura. 1992. Partial deletion of a dystrophin gene leads to exon skipping and to loss of an intra-exon hairpin structure from the predicted mRNA precursor. Biochem. Biophys. Res. Commun. 182:495-500.
    • (1992) Biochem. Biophys. Res. Commun. , vol.182 , pp. 495-500
    • Matsuo, M.1    Nishio, H.2    Kitoh, Y.3    Francke, U.4    Nakamura, H.5
  • 49
    • 0037320850 scopus 로고    scopus 로고
    • Of urchins and men: Evolution of an alternative splicing unit in fibroblast growth factor receptor genes
    • Mistry, N., W. Harrington, E. Lasda, E. J. Wagner, and M. A. Garcia-Blanco. 2003. Of urchins and men: evolution of an alternative splicing unit in fibroblast growth factor receptor genes. RNA 9:209-217.
    • (2003) RNA , vol.9 , pp. 209-217
    • Mistry, N.1    Harrington, W.2    Lasda, E.3    Wagner, E.J.4    Garcia-Blanco, M.A.5
  • 50
    • 0037147250 scopus 로고    scopus 로고
    • A non-sequence-specific double-stranded RNA structural element regulates splicing of two mutually exclusive exons of fibroblast growth factor receptor 2 (FGFR2)
    • Muh, S. J., R. H. Hovhannisyan, and R. P. Carstens. 2002. A non-sequence-specific double-stranded RNA structural element regulates splicing of two mutually exclusive exons of fibroblast growth factor receptor 2 (FGFR2). J. Biol. Chem. 277:50143-50154.
    • (2002) J. Biol. Chem. , vol.277 , pp. 50143-50154
    • Muh, S.J.1    Hovhannisyan, R.H.2    Carstens, R.P.3
  • 51
    • 0021771486 scopus 로고
    • Secondary structure of splice sites in adenovirus mRNA precursors
    • Munroe, S. H. 1984. Secondary structure of splice sites in adenovirus mRNA precursors. Nucleic Acids Res. 12:8437-8456.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 8437-8456
    • Munroe, S.H.1
  • 52
    • 0032913877 scopus 로고    scopus 로고
    • Regulation of fibronectin EDA exon alternative splicing: Possible role of RNA secondary structure for enhancer display
    • Muro, A. F., M. Caputi, R. Pariyarath, F. Pagani, E. Buratti, and F. E. Baralle. 1999. Regulation of fibronectin EDA exon alternative splicing: possible role of RNA secondary structure for enhancer display. Mol. Cell. Biol. 19:2657-2671.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 2657-2671
    • Muro, A.F.1    Caputi, M.2    Pariyarath, R.3    Pagani, F.4    Buratti, E.5    Baralle, F.E.6
  • 53
    • 0038825157 scopus 로고    scopus 로고
    • Regulated splicing of the fibronectin EDA exon is essential for proper skin wound healing and normal lifespan
    • Muro, A. F., A. K. Chauhan, S. Gajovic, A. Iaconcig, F. Porro, G. Stanta, and F. E. Baralle. 2003. Regulated splicing of the fibronectin EDA exon is essential for proper skin wound healing and normal lifespan. J. Cell Biol. 162:149-160.
    • (2003) J. Cell Biol. , vol.162 , pp. 149-160
    • Muro, A.F.1    Chauhan, A.K.2    Gajovic, S.3    Iaconcig, A.4    Porro, F.5    Stanta, G.6    Baralle, F.E.7
  • 54
    • 0032538413 scopus 로고    scopus 로고
    • Regulation of the fibronectin EDA exon alternative splicing. Cooperative role of the exonic enhancer element and the 5′ splicing site
    • Muro, A. F., A. Iaconcig, and F. E. Baralle. 1998. Regulation of the fibronectin EDA exon alternative splicing. Cooperative role of the exonic enhancer element and the 5′ splicing site. FEBS Lett. 437:137-141.
    • (1998) FEBS Lett. , vol.437 , pp. 137-141
    • Muro, A.F.1    Iaconcig, A.2    Baralle, F.E.3
  • 55
    • 0031984931 scopus 로고    scopus 로고
    • Specific binding of an exonic splicing enhancer by the pre-mRNA splicing factor SRp55
    • Nagel, R. J., A. M. Lancaster, and A. M. Zahler. 1998. Specific binding of an exonic splicing enhancer by the pre-mRNA splicing factor SRp55. RNA 4:11-23.
    • (1998) RNA , vol.4 , pp. 11-23
    • Nagel, R.J.1    Lancaster, A.M.2    Zahler, A.M.3
  • 56
    • 0036674179 scopus 로고    scopus 로고
    • High-affinity hnRNP A1 binding sites and duplex-forming inverted repeats have similar effects on 5′ splice site selection in support of a common looping out and repression mechanism
    • Nasim, F. U., S. Hutchison, M. Cordeau, and B. Chabot. 2002. High-affinity hnRNP A1 binding sites and duplex-forming inverted repeats have similar effects on 5′ splice site selection in support of a common looping out and repression mechanism. RNA 8:1078-1089.
    • (2002) RNA , vol.8 , pp. 1078-1089
    • Nasim, F.U.1    Hutchison, S.2    Cordeau, M.3    Chabot, B.4
  • 57
    • 0038712558 scopus 로고    scopus 로고
    • Missense, nonsense, and neutral mutations define juxtaposed regulatory elements of splicing in cystic fibrosis transmembrane regulator exon 9
    • Pagani, F., E. Buratti, C. Stuani, and F. E. Baralle. 2003. Missense, nonsense, and neutral mutations define juxtaposed regulatory elements of splicing in cystic fibrosis transmembrane regulator exon 9. J. Biol. Chem. 278:26580-26588.
    • (2003) J. Biol. Chem. , vol.278 , pp. 26580-26588
    • Pagani, F.1    Buratti, E.2    Stuani, C.3    Baralle, F.E.4
  • 59
  • 60
    • 0033119454 scopus 로고    scopus 로고
    • mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences
    • Seffens, W., and D. Digby. 1999. mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences. Nucleic Acids Res. 27:1578-1584.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1578-1584
    • Seffens, W.1    Digby, D.2
  • 61
    • 0033529188 scopus 로고    scopus 로고
    • Single-nucleotide polymorphisms can cause different structural folds of mRNA
    • Shen, L. X., J. P. Basilion, and V. P. Stanton, Jr. 1999. Single-nucleotide polymorphisms can cause different structural folds of mRNA. Proc. Natl. Acad. Sci. USA 96:7871-7876.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 7871-7876
    • Shen, L.X.1    Basilion, J.P.2    Stanton Jr., V.P.3
  • 62
    • 0030953470 scopus 로고    scopus 로고
    • A specific RNA hairpin loop structure binds the RNA recognition motifs of the Drosophila SR protein B52
    • Shi, H., B. E. Hoffman, and J. T. Lis. 1997. A specific RNA hairpin loop structure binds the RNA recognition motifs of the Drosophila SR protein B52. Mol. Cell. Biol. 17:2649-2657.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 2649-2657
    • Shi, H.1    Hoffman, B.E.2    Lis, J.T.3
  • 63
    • 0142009656 scopus 로고    scopus 로고
    • RNA structure of trinucleotide repeats associated with human neurological diseases
    • Sobczak, K., M. De Mezer, G. Michlewski, J. Krol, and W. J. Krzyzosiak. 2003. RNA structure of trinucleotide repeats associated with human neurological diseases. Nucleic Acids Res. 31:5469-5482.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 5469-5482
    • Sobczak, K.1    De Mezer, M.2    Michlewski, G.3    Krol, J.4    Krzyzosiak, W.J.5
  • 64
    • 0031466966 scopus 로고    scopus 로고
    • Novel exonic elements that modulate splicing of the human libronectin EDA exon
    • Staffa, A., N. H. Acheson, and A. Cochrane. 1997. Novel exonic elements that modulate splicing of the human libronectin EDA exon. J. Biol. Chem. 272:33394-33401.
    • (1997) J. Biol. Chem. , vol.272 , pp. 33394-33401
    • Staffa, A.1    Acheson, N.H.2    Cochrane, A.3
  • 66
    • 0033529304 scopus 로고    scopus 로고
    • Structure of tau exon 10 splicing regulatory element RNA and destabilization by mutations of frontotemporal dementia and parkinsonism linked to chromosome 17
    • Varani, L., M. Hasegawa, M. G. Spillantini, M. J. Smith, J. R. Murrell, B. Ghetti, A. Klug, M. Goedert, and G. Varani. 1999. Structure of tau exon 10 splicing regulatory element RNA and destabilization by mutations of frontotemporal dementia and parkinsonism linked to chromosome 17. Proc. Natl. Acad. Sci. USA 96:8229-8234.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 8229-8234
    • Varani, L.1    Hasegawa, M.2    Spillantini, M.G.3    Smith, M.J.4    Murrell, J.R.5    Ghetti, B.6    Klug, A.7    Goedert, M.8    Varani, G.9
  • 67
    • 0033572893 scopus 로고    scopus 로고
    • No evidence that mRNAs have lower folding free energies than random sequences with the same dinucleotide distribution
    • Workman, C., and A. Krogh. 1999. No evidence that mRNAs have lower folding free energies than random sequences with the same dinucleotide distribution. Nucleic Acids Res. 27:4816-4822.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 4816-4822
    • Workman, C.1    Krogh, A.2
  • 68
    • 0037068447 scopus 로고    scopus 로고
    • Comprehensive proteomic analysis of the human spliceosome
    • Zhou, Z., L. J. Licklider, S. P. Gygi, and R. Reed. 2002. Comprehensive proteomic analysis of the human spliceosome. Nature 419:182-185.
    • (2002) Nature , vol.419 , pp. 182-185
    • Zhou, Z.1    Licklider, L.J.2    Gygi, S.P.3    Reed, R.4
  • 69
    • 0024806949 scopus 로고
    • Computer prediction of RNA structure
    • Zuker, M. 1989. Computer prediction of RNA structure. Methods Enzymol. 180:262-288.
    • (1989) Methods Enzymol. , vol.180 , pp. 262-288
    • Zuker, M.1
  • 70
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31:3406-3415.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 71
    • 0002287019 scopus 로고    scopus 로고
    • Algorithms and thermodynamics for RNA secondary structure prediction: A practical guide
    • W. J. Barciszewski and B. F. C. Clark (ed.). NATO ASI series. Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Zuker, M., D. H. Mathews, and D. H. Turner. 1999. Algorithms and thermodynamics for RNA secondary structure prediction: a practical guide, p. 11-43. In W. J. Barciszewski and B. F. C. Clark (ed.), RNA biochemistry and biotechnology. NATO ASI series. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (1999) RNA Biochemistry and Biotechnology , pp. 11-43
    • Zuker, M.1    Mathews, D.H.2    Turner, D.H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.