-
1
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann R.I., Ludwig W., Schleifer K.-H. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:1995;143-169.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.-H.3
-
2
-
-
0034666483
-
Cluster analysis, richness and biodiversity indexes derived from denaturing gradient gel electrophoresis fingerprints of bacterial communities demonstrate that traditional maize fermentations are driven by the transformation process
-
Ampe F., Miambi E. Cluster analysis, richness and biodiversity indexes derived from denaturing gradient gel electrophoresis fingerprints of bacterial communities demonstrate that traditional maize fermentations are driven by the transformation process. Int. J. Food Microbiol. 60:2000;91-97.
-
(2000)
Int. J. Food Microbiol.
, vol.60
, pp. 91-97
-
-
Ampe, F.1
Miambi, E.2
-
3
-
-
0041153826
-
Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation-independent methods to investigate traditional fermentations
-
Ampe F., Ben Omar N., Moizan C., Wacher C., Guyot J.-P. Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation-independent methods to investigate traditional fermentations. Appl. Environ. Microbiol. 65:1999;5464-5473.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 5464-5473
-
-
Ampe, F.1
Ben Omar, N.2
Moizan, C.3
Wacher, C.4
Guyot, J.-P.5
-
4
-
-
0035843653
-
Dynamics of the microbial community responsible for traditional sour cassava starch fermentation studied by denaturing gradient gel electrophoresis and quantitative rRNA hybridization
-
Ampe F., Sirvent A., Zakhia N. Dynamics of the microbial community responsible for traditional sour cassava starch fermentation studied by denaturing gradient gel electrophoresis and quantitative rRNA hybridization. Int. J. Food Microbiol. 65:2001;45-54.
-
(2001)
Int. J. Food Microbiol.
, vol.65
, pp. 45-54
-
-
Ampe, F.1
Sirvent, A.2
Zakhia, N.3
-
5
-
-
0042197522
-
Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers
-
Avrahami S., Liesack W., Conrad R. Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers. Environ. Microbiol. 5:2003;691-705.
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 691-705
-
-
Avrahami, S.1
Liesack, W.2
Conrad, R.3
-
6
-
-
0036151745
-
Phylogenetic composition of bacterioplankton assemblages from the Artic Ocean
-
Bano N., Hollibaugh J.T. Phylogenetic composition of bacterioplankton assemblages from the Artic Ocean. Appl. Environ. Microbiol. 68:2002;505-518.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 505-518
-
-
Bano, N.1
Hollibaugh, J.T.2
-
7
-
-
0033823404
-
Microbial community dynamics during production of the Mexican fermented maize dough pozol
-
ben Omar N., Ampe F. Microbial community dynamics during production of the Mexican fermented maize dough pozol. Appl. Environ. Microbiol. 66:2000;3664-3673.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 3664-3673
-
-
Ben Omar, N.1
Ampe, F.2
-
8
-
-
0141816981
-
Combining denaturing gradient gel electrophoresis of 16S rDNA V3 region and 16S-23S rDNA spacer region polymorphism analyses for the identification of staphylococci from Italian fermented sausages
-
Blaiotta G., Pennacchia C., Ercolini D., Moschetti G., Villani F. Combining denaturing gradient gel electrophoresis of 16S rDNA V3 region and 16S-23S rDNA spacer region polymorphism analyses for the identification of staphylococci from Italian fermented sausages. Syst. Appl. Microbiol. 26:2003;423-433.
-
(2003)
Syst. Appl. Microbiol.
, vol.26
, pp. 423-433
-
-
Blaiotta, G.1
Pennacchia, C.2
Ercolini, D.3
Moschetti, G.4
Villani, F.5
-
9
-
-
0347927263
-
Improved understanding of the bacterial vaginal microbiota of women before and after probiotic instillation
-
Burton J.P., Cadieux P.A., Reid G. Improved understanding of the bacterial vaginal microbiota of women before and after probiotic instillation. Appl. Environ. Microbiol. 69:2003;97-101.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 97-101
-
-
Burton, J.P.1
Cadieux, P.A.2
Reid, G.3
-
10
-
-
0034256049
-
Direct profiling of the yeast dynamics in wine fermentations
-
Cocolin L., Bisson L.F., Mills D.A. Direct profiling of the yeast dynamics in wine fermentations. FEMS Microbiol. Lett. 189:2000;81-87.
-
(2000)
FEMS Microbiol. Lett.
, vol.189
, pp. 81-87
-
-
Cocolin, L.1
Bisson, L.F.2
Mills, D.A.3
-
11
-
-
0034922099
-
Direct identification of the indigenous yeasts in commercial wine fermentations
-
Cocolin L., Heisey A., Mills D.A. Direct identification of the indigenous yeasts in commercial wine fermentations. Am. J. Enol. Vitic. 52:2001;49-53.
-
(2001)
Am. J. Enol. Vitic.
, vol.52
, pp. 49-53
-
-
Cocolin, L.1
Heisey, A.2
Mills, D.A.3
-
12
-
-
0035644966
-
A novel polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) for the identification of Micrococcaceae strains involved in meat fermentations. Its application to naturally fermented Italian sausages
-
Cocolin L., Manzano M., Aggio D., Cantoni C., Comi G. A novel polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) for the identification of Micrococcaceae strains involved in meat fermentations. Its application to naturally fermented Italian sausages. Meat Sci. 57:2001;59-64.
-
(2001)
Meat Sci.
, vol.57
, pp. 59-64
-
-
Cocolin, L.1
Manzano, M.2
Aggio, D.3
Cantoni, C.4
Comi, G.5
-
13
-
-
0035511958
-
Denaturing gradient gel electrophoresis analysis of the 16S rRNA gene V1 region to monitor dynamic changes in the bacterial population during fermentation of Italian sausages
-
Cocolin L., Manzano M., Cantoni C., Comi G. Denaturing gradient gel electrophoresis analysis of the 16S rRNA gene V1 region to monitor dynamic changes in the bacterial population during fermentation of Italian sausages. Appl. Environ. Microbiol. 67:2001;5113-5121.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 5113-5121
-
-
Cocolin, L.1
Manzano, M.2
Cantoni, C.3
Comi, G.4
-
14
-
-
0036095105
-
An application of PCR-DGGE analysis to profile the yeast populations in raw milk
-
Cocolin L., Aggio D., Manzano M., Cantoni C., Comi G. An application of PCR-DGGE analysis to profile the yeast populations in raw milk. Int. Dairy J. 12:2002;407-411.
-
(2002)
Int. Dairy J.
, vol.12
, pp. 407-411
-
-
Cocolin, L.1
Aggio, D.2
Manzano, M.3
Cantoni, C.4
Comi, G.5
-
15
-
-
0036109747
-
Monitoring of yeasts population changes during a continuous wine fermentation by molecular methods
-
Cocolin L., Manzano M., Rebecca S., Comi G. Monitoring of yeasts population changes during a continuous wine fermentation by molecular methods. Am. J. Enol. Vitic. 53:2002;24-27.
-
(2002)
Am. J. Enol. Vitic.
, vol.53
, pp. 24-27
-
-
Cocolin, L.1
Manzano, M.2
Rebecca, S.3
Comi, G.4
-
16
-
-
0036947215
-
Direct identification in food samples of Listeria spp. and Listeria monocytogenes by molecular methods
-
Cocolin L., Rantsiou K., Iacumin L., Cantoni C., Comi G. Direct identification in food samples of Listeria spp. and Listeria monocytogenes by molecular methods. Appl. Environ. Microbiol. 68:2002;6273-6282.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 6273-6282
-
-
Cocolin, L.1
Rantsiou, K.2
Iacumin, L.3
Cantoni, C.4
Comi, G.5
-
17
-
-
0035106814
-
Molecular evaluation of microbial diversity occurring in different types of Mozzarella cheese
-
Coppola S., Blaiotta G., Ercolini D., Moschetti G. Molecular evaluation of microbial diversity occurring in different types of Mozzarella cheese. J. Appl. Microbiol. 90:2001;414-420.
-
(2001)
J. Appl. Microbiol.
, vol.90
, pp. 414-420
-
-
Coppola, S.1
Blaiotta, G.2
Ercolini, D.3
Moschetti, G.4
-
18
-
-
0242668350
-
Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source
-
Crump B.C., Kling G.W., Bahar M., Hobbie J.E. Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source. Appl. Environ. Microbiol. 69:2003;2253-2268.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 2253-2268
-
-
Crump, B.C.1
Kling, G.W.2
Bahar, M.3
Hobbie, J.E.4
-
19
-
-
0034794369
-
Molecular fingerprinting of bacterial populations in groundwater and bottled mineral water
-
Dewettinck T., Hulsbosch W., Van Hege K., Top E.M., Verstraete W. Molecular fingerprinting of bacterial populations in groundwater and bottled mineral water. Appl. Microbiol. Biotechnol. 57:2001;412-418.
-
(2001)
Appl. Microbiol. Biotechnol.
, vol.57
, pp. 412-418
-
-
Dewettinck, T.1
Hulsbosch, W.2
Van Hege, K.3
Top, E.M.4
Verstraete, W.5
-
20
-
-
0038730576
-
Use of denaturing gradient gel electrophoresis for analysis of the stool microbiota of hospitalized patients
-
Donskey C.J., Hujer A.M., Das S.M., Pultz N.J., Bonomo R.A., Rice L.B. Use of denaturing gradient gel electrophoresis for analysis of the stool microbiota of hospitalized patients. J. Microbiol. Methods. 54:2003;249-256.
-
(2003)
J. Microbiol. Methods.
, vol.54
, pp. 249-256
-
-
Donskey, C.J.1
Hujer, A.M.2
Das, S.M.3
Pultz, N.J.4
Bonomo, R.A.5
Rice, L.B.6
-
21
-
-
0033025914
-
Effect of phenylurea herbicides on soil microbial communities estimated by analysis of 16S rRNA gene fingerprints and community-level physiological profiles
-
El Fantroussi S., Verschuere L., Verstraete W., Top E.M. Effect of phenylurea herbicides on soil microbial communities estimated by analysis of 16S rRNA gene fingerprints and community-level physiological profiles. Appl. Environ. Microbiol. 65:1999;982-988.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 982-988
-
-
El Fantroussi, S.1
Verschuere, L.2
Verstraete, W.3
Top, E.M.4
-
22
-
-
0035115577
-
Behavior of variable V3 region from 16S rDNA of important lactic acid bacteria in denaturing gradient gel electrophoresis
-
Ercolini D., Moschetti G., Blaiotta G., Coppola S. Behavior of variable V3 region from 16S rDNA of important lactic acid bacteria in denaturing gradient gel electrophoresis. Curr. Microbiol. 42:2001;199-202.
-
(2001)
Curr. Microbiol.
, vol.42
, pp. 199-202
-
-
Ercolini, D.1
Moschetti, G.2
Blaiotta, G.3
Coppola, S.4
-
23
-
-
0035708608
-
The potential of a polyphasic PCR-DGGE approach in evaluating microbial diversity of Natural Whey Cultures for water-buffalo Mozzarella cheese production: Bias of "culture dependent" and "culture independent" approaches
-
Ercolini D., Moschetti G., Blaiotta G., Coppola S. The potential of a polyphasic PCR-DGGE approach in evaluating microbial diversity of Natural Whey Cultures for water-buffalo Mozzarella cheese production: bias of "culture dependent" and "culture independent" approaches. Syst. Appl. Microbiol. 24:2001;610-617.
-
(2001)
Syst. Appl. Microbiol.
, vol.24
, pp. 610-617
-
-
Ercolini, D.1
Moschetti, G.2
Blaiotta, G.3
Coppola, S.4
-
24
-
-
0037898607
-
Molecular typing of cheeses on the basis of their microflora as detected by PCR-DGGE analysis
-
Ercolini D., Blaiotta G., Moschetti G., Coppola S. Molecular typing of cheeses on the basis of their microflora as detected by PCR-DGGE analysis. Ann. Microbiol. 52:2002;81-87.
-
(2002)
Ann. Microbiol.
, vol.52
, pp. 81-87
-
-
Ercolini, D.1
Blaiotta, G.2
Moschetti, G.3
Coppola, S.4
-
25
-
-
0037640904
-
Bacterial community structure and location in Stilton cheese
-
Ercolini D., Hill P.J., Dodd C.E.R. Bacterial community structure and location in Stilton cheese. Appl. Environ. Microbiol. 69:2003;3540-3548.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 3540-3548
-
-
Ercolini, D.1
Hill, P.J.2
Dodd, C.E.R.3
-
26
-
-
0037290275
-
Development of a fluorescence in situ hybridisation method for cheese using a 16S rRNA probe
-
Ercolini D., Hill P.J., Dodd C.E.R. Development of a fluorescence in situ hybridisation method for cheese using a 16S rRNA probe. J. Microbiol. Methods. 52:2003;267-271.
-
(2003)
J. Microbiol. Methods
, vol.52
, pp. 267-271
-
-
Ercolini, D.1
Hill, P.J.2
Dodd, C.E.R.3
-
27
-
-
85030898679
-
PCR-DGGE fingerprints of microbial succession during a manufacture of traditional water buffalo Mozzarella cheese
-
in press.
-
Ercolini, D., Mauriello, G., Blaiotta, G., Moschetti, G., Coppola, S. PCR-DGGE fingerprints of microbial succession during a manufacture of traditional water buffalo Mozzarella cheese. J. Appl. Microbiol., in press.
-
J. Appl. Microbiol.
-
-
Ercolini, D.1
Mauriello, G.2
Blaiotta, G.3
Moschetti, G.4
Coppola, S.5
-
28
-
-
0037445744
-
Bacterial composition of commercial probiotic products as evaluated by PCR-DGGE analysis
-
Fasoli S., Marzotto M., Rizzotti L., Rossi F., Dellaglio F., Torriani S. Bacterial composition of commercial probiotic products as evaluated by PCR-DGGE analysis. Int. J. Food Microbiol. 82:2003;59-70.
-
(2003)
Int. J. Food Microbiol.
, vol.82
, pp. 59-70
-
-
Fasoli, S.1
Marzotto, M.2
Rizzotti, L.3
Rossi, F.4
Dellaglio, F.5
Torriani, S.6
-
29
-
-
0029805854
-
Direct ribosomal isolation from soil to extract bacterial rRNA for community analysis
-
Felske A., Engelen B., Nubel U., Backhaus H. Direct ribosomal isolation from soil to extract bacterial rRNA for community analysis. Appl. Environ. Microbiol. 62:1996;4162-4167.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 4162-4167
-
-
Felske, A.1
Engelen, B.2
Nubel, U.3
Backhaus, H.4
-
30
-
-
0030063913
-
Denaturing gradient gel electrophoresis profiles of 16S rRNA defined populations inhabiting a hot spring microbial mat community
-
Ferris M.J., Muyzer G., Ward D.M. Denaturing gradient gel electrophoresis profiles of 16S rRNA defined populations inhabiting a hot spring microbial mat community. Appl. Environ. Microbiol. 62:1996;340-346.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 340-346
-
-
Ferris, M.J.1
Muyzer, G.2
Ward, D.M.3
-
31
-
-
0030613231
-
Population structure and physiological changes within a hot spring microbial mat community following disturbance
-
Ferris M.J., Nold S.C., Revsbech N.P., Ward D.M. Population structure and physiological changes within a hot spring microbial mat community following disturbance. Appl. Environ. Microbiol. 63:1997;1367-1374.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 1367-1374
-
-
Ferris, M.J.1
Nold, S.C.2
Revsbech, N.P.3
Ward, D.M.4
-
32
-
-
0001430252
-
DNA fragments differing by single base pair substitutions are separated in denaturing gradient gels: Correspondence with melting theory
-
Fisher S.G., Lerman L.S. DNA fragments differing by single base pair substitutions are separated in denaturing gradient gels: correspondence with melting theory. Proc. Natl. Acad. Sci. U. S. A. 80:1983;1579-1583.
-
(1983)
Proc. Natl. Acad. Sci. U. S. A.
, vol.80
, pp. 1579-1583
-
-
Fisher, S.G.1
Lerman, L.S.2
-
35
-
-
0036001071
-
Occurrence and activity of Archea in areated activated sludge wastewater treatment plants
-
Gray N.D., Miskin I.P., Kornilova O., Curtis T.P., Head I.M. Occurrence and activity of Archea in areated activated sludge wastewater treatment plants. Environ. Microbiol. 4:2002;158-168.
-
(2002)
Environ. Microbiol.
, vol.4
, pp. 158-168
-
-
Gray, N.D.1
Miskin, I.P.2
Kornilova, O.3
Curtis, T.P.4
Head, I.M.5
-
36
-
-
0037466728
-
Phenotypic and genotypic characterization of Oenococcus oeni strains isolated from Italian wines
-
Guerrini S., Bastianini A., Blaiotta G., Granchi L., Moschetti G., Coppola S., Romano P., Vincenzini M. Phenotypic and genotypic characterization of Oenococcus oeni strains isolated from Italian wines. Int. J. Food Microbiol. 83:2003;1-14.
-
(2003)
Int. J. Food Microbiol.
, vol.83
, pp. 1-14
-
-
Guerrini, S.1
Bastianini, A.2
Blaiotta, G.3
Granchi, L.4
Moschetti, G.5
Coppola, S.6
Romano, P.7
Vincenzini, M.8
-
37
-
-
0036709306
-
Denaturing gradient gel electrophoretic multilocus sequence typing of Staphylococcus aureus isolates
-
Gurtler V., Garrie H.D., Mayall B.C. Denaturing gradient gel electrophoretic multilocus sequence typing of Staphylococcus aureus isolates. Electrophoresis. 23:2002;3310-3320.
-
(2002)
Electrophoresis
, vol.23
, pp. 3310-3320
-
-
Gurtler, V.1
Garrie, H.D.2
Mayall, B.C.3
-
38
-
-
0031982528
-
Microbial evolution, diversity, and ecology: A decade of ribosomal analysis of uncultivated microorganisms
-
Head I.M., Saunders J.R., Pickup R.W. Microbial evolution, diversity, and ecology: a decade of ribosomal analysis of uncultivated microorganisms. Microb. Ecol. 35:1998;1-21.
-
(1998)
Microb. Ecol.
, vol.35
, pp. 1-21
-
-
Head, I.M.1
Saunders, J.R.2
Pickup, R.W.3
-
39
-
-
0036139245
-
Molecular diversity of Lactobacillus spp., and other lactic acid bacteria in the human intestine as determined by specific amplification of 16S ribosomal DNA
-
Heilig G.H.J., Zoetendal E.G., Vaughan E.E., Marteau P., Akkermans A.D.L., de Vos W.M. Molecular diversity of Lactobacillus spp., and other lactic acid bacteria in the human intestine as determined by specific amplification of 16S ribosomal DNA. Appl. Environ. Microbiol. 68:2002;114-123.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 114-123
-
-
Heilig, G.H.J.1
Zoetendal, E.G.2
Vaughan, E.E.3
Marteau, P.4
Akkermans, A.D.L.5
De Vos, W.M.6
-
40
-
-
0025990859
-
Identification of mesophilic lactic acid bacteria by using polymerase chain reaction-amplified variable regions of 16S rRNA and specific DNA probes
-
Klijn N., Weerkamp A.H., de Vos W.M. Identification of mesophilic lactic acid bacteria by using polymerase chain reaction-amplified variable regions of 16S rRNA and specific DNA probes. Appl. Environ. Microbiol. 57:1991;390-3393.
-
(1991)
Appl. Environ. Microbiol.
, vol.57
, pp. 390-3393
-
-
Klijn, N.1
Weerkamp, A.H.2
De Vos, W.M.3
-
41
-
-
0028082207
-
Recognition of chimeric small-subunit ribosomal DNAs composed from genes from uncultivated microorganisms
-
Kopczynski E.D., Bateson M.M., Ward D.M. Recognition of chimeric small-subunit ribosomal DNAs composed from genes from uncultivated microorganisms. Appl. Environ. Microbiol. 60:1994;746-748.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 746-748
-
-
Kopczynski, E.D.1
Bateson, M.M.2
Ward, D.M.3
-
42
-
-
0021154421
-
Sequence-determined DNA separations
-
Lerman L.S., Fisher S.G., Hurley I., Silverstain K., Lumelsky N. Sequence-determined DNA separations. Annu. Rev. Biophys. Bioeng. 13:1984;399-423.
-
(1984)
Annu. Rev. Biophys. Bioeng.
, vol.13
, pp. 399-423
-
-
Lerman, L.S.1
Fisher, S.G.2
Hurley, I.3
Silverstain, K.4
Lumelsky, N.5
-
43
-
-
51249171800
-
Potential risks of gene amplification by PCR as determined by 16S rDNA analysis of a mixed culture of strict barophilic bacteria
-
Liesack W., Weyland H., Stackebrandt E. Potential risks of gene amplification by PCR as determined by 16S rDNA analysis of a mixed culture of strict barophilic bacteria. Microbiol. Ecol. 21:1991;191-198.
-
(1991)
Microbiol. Ecol.
, vol.21
, pp. 191-198
-
-
Liesack, W.1
Weyland, H.2
Stackebrandt, E.3
-
44
-
-
0027998116
-
Bacterial phylogeny based on 16S and 23S rRNA sequence analysis
-
Ludwig W., Schleifer K.H. Bacterial phylogeny based on 16S and 23S rRNA sequence analysis. FEMS Microbiol. Rev. 15:1994;155-173.
-
(1994)
FEMS Microbiol. Rev.
, vol.15
, pp. 155-173
-
-
Ludwig, W.1
Schleifer, K.H.2
-
45
-
-
0038515384
-
Relationship between flavouring capabilities, bacterial composition and geographical origin of Natural Whey Cultures (NWCs) used for water-buffalo Mozzarella cheese manufacture
-
Mauriello G., Moio L., Genovese A., Ercolini D. Relationship between flavouring capabilities, bacterial composition and geographical origin of Natural Whey Cultures (NWCs) used for water-buffalo Mozzarella cheese manufacture. J. Dairy Sci. 86:2003;486-497.
-
(2003)
J. Dairy Sci.
, vol.86
, pp. 486-497
-
-
Mauriello, G.1
Moio, L.2
Genovese, A.3
Ercolini, D.4
-
46
-
-
0242416546
-
Growth and molecular characterization of dental plaque microcosms
-
Mc Bain A.J., Bartolo R.G., Catrenich C.E., Charbonneau D., Ledder R.G., Gilbert P. Growth and molecular characterization of dental plaque microcosms. J. Appl. Microbiol. 94:2003;655-664.
-
(2003)
J. Appl. Microbiol.
, vol.94
, pp. 655-664
-
-
Mc Bain, A.J.1
Bartolo, R.G.2
Catrenich, C.E.3
Charbonneau, D.4
Ledder, R.G.5
Gilbert, P.6
-
47
-
-
0037224663
-
Monitoring the bacterial population dynamics in sourdough fermentation processes by using PCR-denaturing gradient gel electrophoresis
-
Meroth C.B., Walter J., Hertel C., Brandt M.J., Hammes W.P. Monitoring the bacterial population dynamics in sourdough fermentation processes by using PCR-denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 69:2003;475-482.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 475-482
-
-
Meroth, C.B.1
Walter, J.2
Hertel, C.3
Brandt, M.J.4
Hammes, W.P.5
-
48
-
-
0037466413
-
Identification, isolation and quantification of representative bacteria from fermented cassava dough using an integrated approach of culture-dependent and culture-independent methods
-
Miambi E., Guyot J.-P., Ampe F. Identification, isolation and quantification of representative bacteria from fermented cassava dough using an integrated approach of culture-dependent and culture-independent methods. Int. J. Food Microbiol. 82:2003;111-120.
-
(2003)
Int. J. Food Microbiol.
, vol.82
, pp. 111-120
-
-
Miambi, E.1
Guyot, J.-P.2
Ampe, F.3
-
49
-
-
0036795785
-
Yeast diversity and persistence in Botrytis-affected wine fermentations
-
Mills D.A., Johannsen E.A., Cocolin L. Yeast diversity and persistence in Botrytis-affected wine fermentations. Appl. Environ. Microbiol. 68:2002;4884-4893.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 4884-4893
-
-
Mills, D.A.1
Johannsen, E.A.2
Cocolin, L.3
-
50
-
-
0033152336
-
DGGE/TGGE a method for identifying genes from natural ecosystems
-
Muyzer G. DGGE/TGGE a method for identifying genes from natural ecosystems. Curr. Opin. Microbiol. 2:1999;317-322.
-
(1999)
Curr. Opin. Microbiol.
, vol.2
, pp. 317-322
-
-
Muyzer, G.1
-
51
-
-
0031959006
-
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
-
Muyzer G., Smalla K. Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie van Leeuwenhoek. 73:1998;127-141.
-
(1998)
Antonie Van Leeuwenhoek
, vol.73
, pp. 127-141
-
-
Muyzer, G.1
Smalla, K.2
-
52
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer G., De Waal E.C., Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:1993;695-700.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De Waal, E.C.2
Uitterlinden, A.G.3
-
53
-
-
0001868073
-
Denaturing gradient gel electrophoresis (DGGE) in microbial ecology
-
A.D.L. Akkermans, J.D. Van Elsas, Bruijn F.J. Dordrecht, The Netherlands: Kluwer Academic Publishing
-
Muyzer G., Brinkoff T., Nubel U., Santegoeds C., Schafer H., Waver C. Denaturing gradient gel electrophoresis (DGGE) in microbial ecology. Akkermans A.D.L., Van Elsas J.D., Bruijn F.J. Molecular Microbial Ecology Manual. vol. 3.4.4:1997;1-27 Kluwer Academic Publishing, Dordrecht, The Netherlands.
-
(1997)
Molecular Microbial Ecology Manual
, vol.344
, pp. 1-27
-
-
Muyzer, G.1
Brinkoff, T.2
Nubel, U.3
Santegoeds, C.4
Schafer, H.5
Waver, C.6
-
54
-
-
0022422655
-
Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis
-
Myers R.M., Fisher S.G., Lerman L.S., Maniatis T. Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis. Nucleic Acids Res. 13:1985;3131-3145.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 3131-3145
-
-
Myers, R.M.1
Fisher, S.G.2
Lerman, L.S.3
Maniatis, T.4
-
55
-
-
0023476285
-
Detection and localization of single base changes by denaturing gradient gel electrophoresis
-
Myers R.M., Maniatis T., Lerman L.S. Detection and localization of single base changes by denaturing gradient gel electrophoresis. Methods Enzymol. 155:1987;501-527.
-
(1987)
Methods Enzymol.
, vol.155
, pp. 501-527
-
-
Myers, R.M.1
Maniatis, T.2
Lerman, L.S.3
-
56
-
-
0037345250
-
The impact grassland management on archaeal community structure in upland pasture rhizosphere soil
-
Nicol G.W., Glover L.A., Prosser J.I. The impact grassland management on archaeal community structure in upland pasture rhizosphere soil. Environ. Microbiol. 5:2003;152-162.
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 152-162
-
-
Nicol, G.W.1
Glover, L.A.2
Prosser, J.I.3
-
57
-
-
0033781837
-
Evaluation of phenotypic and genotypic methods for subtyping Campylobacter jejuni isolates from humans, poultry, and cattle
-
Nielsen E.N., Emgberg J., Fussing V., Petersen L., Brogren C.H., On S.L. Evaluation of phenotypic and genotypic methods for subtyping Campylobacter jejuni isolates from humans, poultry, and cattle. J. Clin. Microbiol. 38:2000;3800-3810.
-
(2000)
J. Clin. Microbiol.
, vol.38
, pp. 3800-3810
-
-
Nielsen, E.N.1
Emgberg, J.2
Fussing, V.3
Petersen, L.4
Brogren, C.H.5
On, S.L.6
-
58
-
-
0036947083
-
Soil microbial community structure across a thermal gradient following a geothermal heating event
-
Norris T.B., Wraith J.M., Castenholz R.W., McDermott T.R. Soil microbial community structure across a thermal gradient following a geothermal heating event. Appl. Environ. Microbiol. 68:2002;6300-6309.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 6300-6309
-
-
Norris, T.B.1
Wraith, J.M.2
Castenholz, R.W.3
McDermott, T.R.4
-
59
-
-
0029796310
-
Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis
-
Nübel U., Engelen B., Fleske A., Snadir J., Wieshuber A., Amann R., Ludwig W., Backhaus H. Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. J. Bacteriol. 178:1996;5636-5643.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 5636-5643
-
-
Nübel, U.1
Engelen, B.2
Fleske, A.3
Snadir, J.4
Wieshuber, A.5
Amann, R.6
Ludwig, W.7
Backhaus, H.8
-
60
-
-
0036325188
-
Identification of the bacterial microflora in dairy products by temporal temperature gradient gel electrophoresis
-
Ogier J.-C., Son O., Gruss A., Tailliez P., Delacroix-Buchet A. Identification of the bacterial microflora in dairy products by temporal temperature gradient gel electrophoresis. Appl. Environ. Microbiol. 68:2002;3691-3701.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 3691-3701
-
-
Ogier, J.-C.1
Son, O.2
Gruss, A.3
Tailliez, P.4
Delacroix-Buchet, A.5
-
61
-
-
0037394511
-
Rope-producing strains of Bacillus spp. from wheat bread and strategy for their control by lactic acid bacteria
-
Pepe O., Blaiotta G., Moschetti G., Greco T., Villani F. Rope-producing strains of Bacillus spp. from wheat bread and strategy for their control by lactic acid bacteria. Appl. Environ. Microbiol. 69:2003;2321-2329.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 2321-2329
-
-
Pepe, O.1
Blaiotta, G.2
Moschetti, G.3
Greco, T.4
Villani, F.5
-
62
-
-
0030871370
-
DNA probe and PCR-specific reaction for Lactobacillus plantarum
-
Quere F., Deschamps A., Urdaci M.C. DNA probe and PCR-specific reaction for Lactobacillus plantarum. J. Appl. Microbiol. 82:1997;783-790.
-
(1997)
J. Appl. Microbiol.
, vol.82
, pp. 783-790
-
-
Quere, F.1
Deschamps, A.2
Urdaci, M.C.3
-
63
-
-
0036211215
-
Diversity, dynamics and activity of bacterial communities during production of an artisanal Sicilian cheese as evaluated by 16S rRNA analysis
-
Randazzo C.L., Torriani S., Akkermans A.D.L., de Vos W.M., Vaughan E.E. Diversity, dynamics and activity of bacterial communities during production of an artisanal Sicilian cheese as evaluated by 16S rRNA analysis. Appl. Environ. Microbiol. 68:2002;1882-1892.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 1882-1892
-
-
Randazzo, C.L.1
Torriani, S.2
Akkermans, A.D.L.3
De Vos, W.M.4
Vaughan, E.E.5
-
64
-
-
0037319936
-
Application of 16S rDNA-DGGE to examine the microbial ecology associated with a social wasp Vespula germanica
-
Reeson A.F., Jancovic T., Kasper M.L., Rogers S., Austin A.D. Application of 16S rDNA-DGGE to examine the microbial ecology associated with a social wasp Vespula germanica. Insect Mol. Biol. 12:2003;85-91.
-
(2003)
Insect Mol. Biol.
, vol.12
, pp. 85-91
-
-
Reeson, A.F.1
Jancovic, T.2
Kasper, M.L.3
Rogers, S.4
Austin, A.D.5
-
66
-
-
0035344464
-
Microorganisms with a taste for Vanilla: Microbial ecology of traditional Indonesian Vanilla curing
-
Röling W.F.M., Kerler J., Braster M., Apriyantono A., Stam H., van Verseveld H.W. Microorganisms with a taste for Vanilla: microbial ecology of traditional Indonesian Vanilla curing. Appl. Environ. Microbiol. 67:2001;1995-2003.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 1995-2003
-
-
Röling, W.F.M.1
Kerler, J.2
Braster, M.3
Apriyantono, A.4
Stam, H.5
Van Verseveld, H.W.6
-
67
-
-
0031764376
-
A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis
-
Schwieger F., Tebbe C.C. A new approach to utilize PCR-single-strand- conformation polymorphism for 16S rRNA gene-based microbial community analysis. Appl. Environ. Microbiol. 64:1998;4870-4876.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4870-4876
-
-
Schwieger, F.1
Tebbe, C.C.2
-
68
-
-
0036795083
-
Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis
-
Sekiguchi H., Watanabe M., Nakahara T., Xu B., Uchiyama H. Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis. Appl. Environ. Microbiol. 68:2002;5142-5150.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 5142-5150
-
-
Sekiguchi, H.1
Watanabe, M.2
Nakahara, T.3
Xu, B.4
Uchiyama, H.5
-
69
-
-
0000023099
-
Attachment of a 40 bp G+C rich sequence (GC-clamp) to genomic DNA fragments by polymerase chain reaction results in improved detection of single-base changes
-
Sheffield V.C., Beck J.S., Stone E.M., Myers R.M. Attachment of a 40 bp G+C rich sequence (GC-clamp) to genomic DNA fragments by polymerase chain reaction results in improved detection of single-base changes. Proc. Natl. Acad. Sci. U. S. A. 86:1989;232-236.
-
(1989)
Proc. Natl. Acad. Sci. U. S. A.
, vol.86
, pp. 232-236
-
-
Sheffield, V.C.1
Beck, J.S.2
Stone, E.M.3
Myers, R.M.4
-
70
-
-
0037318078
-
Bacterial population changes in a membrane bioreactor for graywater treatment monitored by denaturing gradient gel electrophoresis analysis of 16S rRNA gene fragments
-
Stamper D.M., Walch M., Jacobs R.N. Bacterial population changes in a membrane bioreactor for graywater treatment monitored by denaturing gradient gel electrophoresis analysis of 16S rRNA gene fragments. Appl. Environ. Microbiol. 69:2003;852-860.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 852-860
-
-
Stamper, D.M.1
Walch, M.2
Jacobs, R.N.3
-
71
-
-
0030067991
-
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
-
Suzuki M.T., Giovannoni S.J. Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl. Environ. Microbiol. 62:1996;625-630.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 625-630
-
-
Suzuki, M.T.1
Giovannoni, S.J.2
-
72
-
-
0037229186
-
Culture-independent analysis of probiotic products by denaturing gradient gel electrophoresis
-
Temmerman R., Scheirlinck I., Huys G., Swings J. Culture-independent analysis of probiotic products by denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 69:2003;220-226.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 220-226
-
-
Temmerman, R.1
Scheirlinck, I.2
Huys, G.3
Swings, J.4
-
73
-
-
0035734587
-
Identification and typing of Malassezia yeasts using amplified fragment length polymorphisms (AFLP), random amplified polymorphic DNA (RAPD) and denaturing gradient gel electrophoresis (DGGE)
-
Theelen B., Silvestri M., Gueho E., van Belkum A., Boekhout T. Identification and typing of Malassezia yeasts using amplified fragment length polymorphisms (AFLP), random amplified polymorphic DNA (RAPD) and denaturing gradient gel electrophoresis (DGGE). FEMS Yeast Res. 1:2001;79-86.
-
(2001)
FEMS Yeast Res.
, vol.1
, pp. 79-86
-
-
Theelen, B.1
Silvestri, M.2
Gueho, E.3
Van Belkum, A.4
Boekhout, T.5
-
74
-
-
0036135165
-
Evolution of the lactic acid bacterial community during malt whisky fermentation: A polyphasic study
-
van Beek S., Priest F.G. Evolution of the lactic acid bacterial community during malt whisky fermentation: a polyphasic study. Appl. Environ. Microbiol. 68:2002;297-305.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 297-305
-
-
Van Beek, S.1
Priest, F.G.2
-
75
-
-
0032975678
-
Changes in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with viruses
-
van Hannen E.J., Zwart G., van Agterveld P., Gons H.J., Ebert J., Laanbroek H.J. Changes in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with viruses. Appl. Environ. Microbiol. 65:1999;795-801.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 795-801
-
-
Van Hannen, E.J.1
Zwart, G.2
Van Agterveld, P.3
Gons, H.J.4
Ebert, J.5
Laanbroek, H.J.6
-
76
-
-
0028196747
-
Denaturants or cosolvents improve the specificity of PCR amplification of a G+C rich DNA using genetically engineered DNA polymerases
-
Varadaraj K., Skinner D.M. Denaturants or cosolvents improve the specificity of PCR amplification of a G+C rich DNA using genetically engineered DNA polymerases. Gene. 140:1994;1-5.
-
(1994)
Gene
, vol.140
, pp. 1-5
-
-
Varadaraj, K.1
Skinner, D.M.2
-
77
-
-
0033989325
-
Detection and identification of gastrointestinal Lactobacillus species by using denaturing gradient gel electrophoresis and species-specific PCR primers
-
Walter J., Tannock G.W., Tilsala-Timisjarvi A., Rodtong S., Loach D.M., Munro K., Alatossava T. Detection and identification of gastrointestinal Lactobacillus species by using denaturing gradient gel electrophoresis and species-specific PCR primers. Appl. Environ. Microbiol. 66:2000;297-303.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 297-303
-
-
Walter, J.1
Tannock, G.W.2
Tilsala-Timisjarvi, A.3
Rodtong, S.4
Loach, D.M.5
Munro, K.6
Alatossava, T.7
-
78
-
-
0035374627
-
Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human feces by using group-specific PCR primers and denaturing gradient gel electrophoresis
-
Walter J., Hertel C., Tannok G.W., Lis C.M., Munro K., Hammes W.P. Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human feces by using group-specific PCR primers and denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 67:2001;2578-2585.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 2578-2585
-
-
Walter, J.1
Hertel, C.2
Tannok, G.W.3
Lis, C.M.4
Munro, K.5
Hammes, W.P.6
-
79
-
-
0025366456
-
16S rRNA sequences reveal numerous uncultured microorganisms in a natural community
-
Ward D.M., Weller R., Bateson M.M. 16S rRNA sequences reveal numerous uncultured microorganisms in a natural community. Nature. 345:1990;63-65.
-
(1990)
Nature
, vol.345
, pp. 63-65
-
-
Ward, D.M.1
Weller, R.2
Bateson, M.M.3
-
80
-
-
0030748867
-
Inhibition and facilitation of nucleic acid amplification
-
Wilson I.G. Inhibition and facilitation of nucleic acid amplification. Appl. Environ. Microbiol. 63:1997;3741-3751.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 3741-3751
-
-
Wilson, I.G.1
-
81
-
-
0031684010
-
Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria
-
Zoetendal E.G., Akkermans A.D., de Vos W.M. Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria. Appl. Environ. Microbiol. 64:1998;3854-3859.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 3854-3859
-
-
Zoetendal, E.G.1
Akkermans, A.D.2
De Vos, W.M.3
-
82
-
-
0036300743
-
Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces
-
Zoetendal E.G., von Wright A., Vilpponen-Salmela T., Ben-Amor K., Akkermans A.D., de Vos W.M. Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces. Appl. Environ. Microbiol. 68:2002;3401-3407.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 3401-3407
-
-
Zoetendal, E.G.1
Von Wright, A.2
Vilpponen-Salmela, T.3
Ben-Amor, K.4
Akkermans, A.D.5
De Vos, W.M.6
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