Acetylated, methylated, remodeled: Chromatin states for gene regulation

Current Opinion in Plant Biology

Volumn 5, Issue 5, 2002, Pages 437-443

  Lusser, Alexandra ^a,b  

^a UNIVERSITY OF INNSBRUCK   (Austria)

^b SECTION OF MOLECULAR BIOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EMBRYOPHYTA;

EID: 0036779319     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1369-5266(02)00287-X     Document Type: Review

References (60)

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2. Regulation and regulatory parameters of histone modifications
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4. Histone acetylation: Plants and fungi as model systems for the investigation of histone deacetylases
5. The histone tails of the nucleosome
6. The language of covalent histone modifications
7. Translating the histone code
8. Histone acetylation: Lessons from the plant kingdom
9. Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold-regulated gene expression
10. Plant orthologs of p300/CBP: Conservation of a core domain in metazoan p300/CBP acetyltransferase-related proteins
11. Targeted histone acetylation and altered nuclease accessibility over short regions of the pea Plastocyanin gene
12. Histone deacetylases: Silencers for hire
13. Identification of maize histone deacetylase HD2 as an acidic nucleolar phosphoprotein
14. NuRD and SIN3 histone deacetylase complexes in development
15. Epigenetic silencing of RNA polymerase I transcription: A role for DNA methylation and histone modification in nucleolar dominance
16. Identification and characterisation of an RPD3 homologue from maize (Zea mays L.) that is able to complement an rpd3 null mutant of Saccharomyces cerevisiae
17. RPD3-type histone deacetylases in maize embryos
18. Functional analysis of HD2 histone deacetylase homologues in Arabidopsis thaliana
19. Functional analysis of a RPD3 histone deacetylase homologue in Arabidopsis thaliana
20. Blocking histone deacetylation in Arabidopsis induces pleiotropic effects on plant gene regulation and development
21. Identification of Arabidopsis histone deacetylase HDA6 mutants that affect transgene expression
22. Regulation of chromatin structure by site-specific histone H3 methyltransferases
23. Re-SET-ting heterochromatin by histone methyltransferases
24. Transcriptional control: An activating role for arginine methylation
25. Methylation at arginine 17 of histone H3 is linked to gene activation
26. Transcription regulation by histone methylation: Interplay between different covalent modifications of the core histone tails
27. Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries
28. Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins
29. Methylatlon of histone H3 at lysine 4 is highly conserved and correlates with transcriptionally active nuclei in Tetrahymena
30. A trithorax-group complex purified from Saccharomyces cerevisiae is required for methylation of histone H3
31. The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes
32. Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
33. Structure and ligand of a histone acetyltransferase bromodomain
34. Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain
35. Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9
36. Mutations in like heterochromatin protein 1 affect flowering time and plant architecture in Arabidopsis
37. Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor
38. Identification of five sites of acetylation in alfalfa histone H4
39. Mechanisms for ATP-dependent chromatin remodelling
40. Evolution of the SNF2 family of proteins: Subfamilies with distinct sequences and functions
41. The "dark side" of chromatin remodeling: Repressive effects on transcription
42. The many faces of chromatin remodeling: Switching beyond transcription
43. Ordered recruitment of transcription and chromatin remodeling factors to a cell cycleand developmentally regulated promoter
44. Ordered recruitment of chromatin modifying and general transcription factors to the IFN-beta promoter
45. Chromatin remodeling in plants
46. PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis
47. Maintenance of genomic methylation requires a SWI2/SNF2-like protein
48. Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis
49. Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1)
50. SPLAYED, a novel SWI/SNF ATPase homolog, controls reproductive development in Arabidopsis
51. Methylation-induced repression - Belts, braces, and chromatin
52. Lsh, a member of the SNF2 family, is required for genome-wide methylation
53. Disruption of the plant gene MOM releases transcriptional silencing of methylated genes
54. A histone H3 methyltransferase controls DNA methylation in Neurospora crassa
55. Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene
56. Requirement of chromomethylase3 for maintenance of CpXpG methylation
57. Maize chromomethylase Zea methyltransferase2 is required for CpNpG methylation
58. DNA methylation and epigenetic inheritance in plants and filamentous fungi
59. Common themes in mechanisms of gene silencing