Chromatin remodeling in plants

Current Opinion in Plant Biology

Volumn 4, Issue 6, 2001, Pages 494-500

  Verbsky, Michelle L ^a   Richards, Eric J ^a  

^a WASHINGTON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; EMBRYOPHYTA; ZEA MAYS;

EID: 0034783508     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1369-5266(00)00206-5     Document Type: Review

References (64)

1. What does 'chromatin remodeling' mean?
2. Chromatin remodeling enzymes: Who's on first?
3. ATP-dependent chrematin remodeling activities
4. Permeabilized Arabidopsis protoplasts provide new insight into the chromatin structure of plant alcohol dehydrogenase genes
5. Chromatin structure and phaseolin gene regulation
6. A Polycomb-group gene regulates homeotic gene expression in Arabidopsis
7. Interaction of the Arabidopsis polycomb group proteins FIE and MEA mediates their common phenotypes
8. Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing Arabidopsis seeds
9. Mutations in the FIE and MEA genes that encode interacting polycomb proteins cause parent-of-origin effects on seed development by distinct mechanisms
10. Chromatin disruption and modification
11. 25 years after the nucleosome model: Chromatin modifications
12. Genome wide studies of histone deacetylase function in yeast
13. Crystal structure of the nucleosome core particle at 2.8 Å resolution
14. Histone acetylation: Lessons from the plant kingdom
15. Inhibition of maize histone deacetylases by HC toxin, the host-selective toxin of Cochliobolus carbonum
16. Epigenetic silencing of RNA polymerase I transcription: A role for DNA methylation and histone modification in nucleolar dominance
17. Histone deacetylase inhibitors and cell proliferation in pea root meristems
18. Identification of maize histone deacetylase HD2 as an acidic nucleolar phosphoprotein
19. Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold-regulated gene expression
20. Plant orthologs of p300/CBP: Conservation of a core domain in metazoan p300/CBP acetyltransferase-related proteins
21. Histone H4 acetylation of euchromatin and heterochromatin is cell cycle dependent and correlated with replication rather than with transcription
22. Chromatin organization and its relation to replication and histone acetylation during the cell cycle in barley
23. Analysis of the histone acetyltransferase B complex of maize embryos
24. Functional analysis of HD2 histone deacetylase homologues in Arabidopsis thaliana
25. Functional analysis of a RPD3 histone deacetylase homologue in Arabidopsis thaliana
26. Blocking histone deacetylation in Arabidopsis induces pleiotropic effects on plant gene regulation and development
27. Identification of Arabidopsis histone deacetylase HDA6 mutants that affect transgene expression
28. Reduced DNA methylation in Arabidopsis thailiana results in abnormal plant development
29. Developmental abnormalities and epimutations associated with DNA hypomethylation mutations
30. Demethylation-induced developmental pleiotropy in Arabidopsis
31. Ectopic hypermethylation of flower-specific genes in Arabidopsis
32. The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene
33. Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis
34. ISW1 is an ATP-dependent nucleosome remodeling factor
35. Octamer transfer and creation of stably remodeled nucleosomes by human SWI-SNF and its isolated ATPases
36. ATP-dependent remodeling and acetylation as regulators of chromatin fluidity
37. Evolution of the SNF2 family of proteins: Subfamilies with distinct sequences and functions
38. Disruption of the plant gene MOM releases transcriptional silencing of methylated genes
39. Distinct mechanisms promote polarity establishment in carpels of Arabidopsis
40. PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis
41. A multiple subunit Mi-2 histone deacetylase from Xenopus laevis cofractionates with an associated Snf2 supertamily ATPase
42. The dermatomyositis-specific autoantigen Mi2 is a component of a complex containing histone deacetylase and nucleosome remodeling activities
43. Cellular differentiation regulated by gibberellin in the Arabidopsis thaliana pickle mutant
44. Identification and analysis of the Arabidopsis thaliana BSH gene, a member of the SNF5 gene family
45. Essential roles of Snf5p in Snf-Swi chromatin remodeling in vivo
46. FASCIATA genes for chromatin assembly factor-1 in Arabidopsis maintain the cellular organization of apical meristems
47. De novo nucleosome assembly: New pieces in an old puzzle
48. The yeast Cac1 protein is required for the stable inheritance of transcriptionally repressed chromatin at telomeres
49. Chromatin assembly factor I contributes to the maintenance, but not the re-establishment, of silencing at the yeast silent mating loci
50. Methylation-induced repression-belts, braces, and chromatin
51. NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities
52. Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation
53. Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex
54. Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription
55. Histone deacetylase directs the dominant silencing of transcription in chromatin: Association with MeCP2 and the Mi-2 chromodomain SWI/SNF ATPase
56. Trichostatin A causes selective loss of DNA methylation in Neurospora
57. DNMT1 binds HDAC2 and a new co-represser, DMAP1, to form a complex at replication foci
58. DNMT1 forms a complex with Rb, E2F1 and HDAC1 and represses transcription from E2F-responsive promoters
59. Dnmt3a binds deacetylases and is recruited by a sequence-specific represser to silence transcription
60. Treatment with propionic and butyric acid enhances expression variegation and promoter methylation in plant transgenes
61. Emerging connections between DNA methylation and histone acetylation
62. Maintenance of genomic methylation requires a SW12/SN F2-like protein
63. Mutations in ATRX, encoding a SWI/SN F-like protein, cause diverse changes in the pattern of DNA methylation
64. Identification of a novel SNF2/SW12 protein family member, SRCAP, which interacts with CREB-binding protein