Functional analysis of a RPD3 histone deacetylase homologue in Arabidopsis thaliana

Plant Molecular Biology

Volumn 44, Issue 2, 2000, Pages 167-176

  Wu, Keqiang ^a   Malik, Kamal ^a   Tian, Lining ^b   Brown, Daniel ^b   Miki, Brian ^a  

^a OTTAWA RESEARCH AND DEVELOPMENT CENTRE   (Canada)

^b AGRICULTURE AND AGRI FOOD CANADA   (Canada)

Author keywords

Arabidopsis; Gene repression; Histone deacetylase; RPD3

Indexed keywords

ACETYLATION; AMINO ACID SEQUENCE; ANTISENSE GENE; COMPLEMENTARY DNA; EUKARYOTIC CELL; EXPRESSED SEQUENCE TAG; GENE EXPRESSION REGULATION; GENE EXPRESSION; GENE REPRESSION; GENETIC TRANSCRIPTION; GENETIC TRANSFORMATION; HISTONE DEACETYLASE; REPORTER GENE; SEQUENCE HOMOLOGY; TISSUE DISTRIBUTION; TRANSGENIC PLANT;

AMINO ACID SEQUENCE; ARABIDOPSIS; BLOTTING, NORTHERN; DNA, ANTISENSE; DNA, COMPLEMENTARY; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, PLANT; GLUCURONIDASE; HISTONE DEACETYLASES; ISOENZYMES; MOLECULAR SEQUENCE DATA; PHENOTYPE; RECOMBINANT FUSION PROTEINS; RNA, PLANT; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; TISSUE DISTRIBUTION; TRANSCRIPTION FACTORS;

EID: 0033675659     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1006498413543     Document Type: Article

References (61)

1. A conserved family of WD-40 proteins binds to the retinoblastoma protein in both plants and animals
2. Role of NcoR and histone deacetylase in Sin3-mediated transcriptional and oncogenic repression
3. Acetylation and methylation of histone and their possible role in the regulation of RNA synthesis
4. Basic local alignment search tool
5. Second family of histone deacetylases
6. Regulation of activity of the transcription factor GATA-1 by acetylation
7. Development of a simple particle bombardment device for gene delivery into plant cells
8. Plant gene silencing regularized
9. Epigenetic silencing of RNA polymerase I transcription: A role for DNA methylation and histone modification in nucleolar dominance
10. Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
11. A plant DNA minipreparation, version II
12. Characterization of a human RPD3 ortholog, HDAC3
13. DNA methylation and the promotion of flowering by vernalization
14. A new family of human histone deacetylases related to Saccharomyces cerevisiae HDA1p
15. A tobacco cryptic constitutive promoter, tCUP, revealed by T-DNA tagging
16. Nutrient requirement suspension cultures of soybean root cells
17. Aberrant recruitment of the nuclear receptor corepressor-histone deacetylase complex by the acute myeloid leukemia fusion partner ETO
18. Specific DNA binding of GAL4, a positive regulatory protein of yeast
19. Activation of p53 sequence-specific DNA binding by acetylation of the p53 C-terminal domain
20. Nuclear histone acetyltransferases and deacetylases and transcriptional regulation: HAT off to HDACs
21. Histone deacetylase activity is required for full transcriptional repression by mSin3A
22. A role for histone deacetylase activity in HDACl-mediated transcriptional repression
23. Acetylation of general transcription factors by histone acetyltransferases
24. Maintenance of genomic methylation requires a SWI/SNF-like protein
25. Plant reporter genes: The GUS gene fusion system
26. Methylated DNA and MeCP2 recruit histone deacelylase to repress transcription
27. Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoter
28. Histone deacetylase activity of Rpd3 is important for transcriptional repression in vivo
29. Developmental abnormalities and epimutations associated with DNA hypomethylation mutations
30. The origin and utility of histone deacetylases
31. Different types of maize histone deacetylases are distinguished by a highly complex substrate and site specificity
32. Xenopus HDm, a maternally expressed histone deacetylase, belongs to an ancient family of acetyl-metabolizing enzymes
33. Histone deacetylases, acetoin utilization proteins and acetylpolyamine amidohydrolases are members of an ancient protein superfamily
34. Identification of maize histone deacetylase HD2 as an acidic nucleolar phosphoprotein
35. Yeast activators stimulate plant gene expression
36. Homology-dependent gene silencing in plants
37. Evidence for cytosine methylation of non-symmetrical sequences in transgenic Petunia hybrida
38. A revised medium for rapid growth and bioassay with tobacco tissue cultures
39. Nuclear receptor repression mediated by a complex containing SMRT, mSin3A, and histone deacetylase
40. Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex
41. What's up and down with histone deacetylation and transcription
42. Demethylation-induced developmental pleiotropy in Arabidopsis
43. Identification and characterization of an RPD3 homologue from maize (Zea mays L.) that is able to complement an rpd3 null mutant of Saccharomyces cerevisiae
44. HDA1 and RPD3 are members of distinct histone deacetylase complexes that regulate silencing and transcription
45. Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3
46. DNA damage activates p53 through a phosphorylation-acetylation cascade
47. Introduction of cloning plasmids into Agrobacterium tumefaciens
48. Isolation and characterization of plant mRNA
49. Histone acetylation and transcriptional regulatory mechanisms
50. A mammalian histone deacetylase related to a yeast transcriptional regulator Rpd3
51. Large plasmid in Agrobacterium tumefaciens essential for crown gall-inducing ability
52. Identification of a new family of higher eukaryotic histone deacetylases
53. RPD3 encodes a second factor required to achieve maximum positive and negative transcriptional states in Saccharomyces cerevistae
54. A multiple subunit Mi-2 histone deacetylase from Xenopus laevis cofractionates with an associated Snf2 superfamily ATPase
55. Alteration of nucleosome structure as a mechanism of transcriptional regulation
56. Functional analysis of HD2 histone deacetylase homologues in Arabidopsis thaliana
57. Transcriptional repression by YY1 is mediated by interaction with a mammalian homolog of the yeast global regulator RPD3
58. RIGS (repeat-induced gene silencing) in Arabidopsis is transcriptional and alters chromatin configuration
59. Acetylation and modulation of erythroid Kruppel-like factor (EKLF) activity by interaction with histone acetyltransferases
60. The dermatomyositis-specific atttoantigen Mi2 is a component of a complex containing histone deacetylase and nucleosome remodeling activities