메뉴 건너뛰기




Volumn , Issue , 2022, Pages 1111-1144

Origins and evolution of retrotransposons

Author keywords

Caulimoviruses; Hepadnaviruses; Long terminal repeats (LTRs); Retrotransposons; Retroviruses

Indexed keywords


EID: 85158069207     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1128/9781555817954.ch49     Document Type: Chapter
Times cited : (160)

References (166)
  • 1
    • 0025350952 scopus 로고
    • SLACS retrotransposon from Trypanosoma brucei gam- biense is similar to mammalian LINEs
    • Aksoy, S., Williams S., Chang S., Richards F.F. 1990. SLACS retrotransposon from Trypanosoma brucei gam- biense is similar to mammalian LINEs. Nucleic Acids Res. 18:785-792.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 785-792
    • Aksoy, S.1    Williams, S.2    Chang, S.3    Richards, F.F.4
  • 2
    • 0034747801 scopus 로고    scopus 로고
    • Sequence- specific recognition and cleavage of Telomeric Repeat (TTAGG)n by Endonuclease of Non-Long Terminal Repeat Retrotransposon TRAS1
    • Anzai, T., Takahashi H., Fujiwara H. 2001. Sequence- specific recognition and cleavage of Telomeric Repeat (TTAGG)n by Endonuclease of Non-Long Terminal Repeat Retrotransposon TRAS1. Mol. Cell. Biol. 21:100-108.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 100-108
    • Anzai, T.1    Takahashi, H.2    Fujiwara, H.3
  • 4
    • 0025021666 scopus 로고
    • A retrotransposable element from the mosquito Anopheles gambiae
    • Besansky, N. J. 1990. A retrotransposable element from the mosquito Anopheles gambiae. Mol. Cell. Biol. 10:863-871.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 863-871
    • Besansky, N.J.1
  • 5
    • 0032103829 scopus 로고    scopus 로고
    • Gene clusters and polycistronic transcription in eukaryotes
    • Blumenthal, T. 1998. Gene clusters and polycistronic transcription in eukaryotes. Bioessays 20:480-487.
    • (1998) Bioessays , vol.20 , pp. 480-487
    • Blumenthal, T.1
  • 6
    • 0024470037 scopus 로고
    • Transcription and reverse transcription of retrotransposons
    • Boeke, J. D., Corces V.G. 1989. Transcription and reverse transcription of retrotransposons. Annu. Rev. Microbiol. 43:403-434.
    • (1989) Annu. Rev. Microbiol. , vol.43 , pp. 403-434
    • Boeke, J.D.1    Corces, V.G.2
  • 7
    • 0032568799 scopus 로고    scopus 로고
    • Yeastretrotransposons: finding a nice quiet neighborhood
    • Boeke, J. D., Devine S.E. 1998. Yeastretrotransposons: finding a nice quiet neighborhood. Cell 93:1087-1089.
    • (1998) Cell , vol.93 , pp. 1087-1089
    • Boeke, J.D.1    Devine, S.E.2
  • 8
    • 9444258346 scopus 로고    scopus 로고
    • Pseudoviridae, p 349-357
    • In M.H. V. van Regenmortel et al. (ed.), VIIth Report of the Springer-Verlag ICTV., New York, N.Y
    • Boeke, J. D., Eickbush T.H., Sandmeyer S.B., Voytas D.F. 2000. Pseudoviridae, p 349-357. In M.H. V. van Regenmortel et al. (ed.), Virus Taxonomy: VIIth Report of the Springer-Verlag ICTV., New York, N.Y.
    • (2000) Virus Taxonomy
    • Boeke, J.D.1    Eickbush, T.H.2    Sandmeyer, S.B.3    Voytas, D.F.4
  • 9
    • 9444258346 scopus 로고    scopus 로고
    • Metaviridae, p 359-367
    • In M.H. V. van Regenmortel et al. (ed.), VIIth Report of the Springer-Verlag ICTV., New York, N.Y
    • Boeke, J. D., Eickbush T.H., Sandmeyer S.B., Voytas D.F. 1999. Metaviridae, p 359-367. In M.H. V. van Regenmortel et al. (ed.), Virus Taxonomy: VIIth Report of the Springer-Verlag ICTV., New York, N.Y.
    • (1999) Virus Taxonomy
    • Boeke, J.D.1    Eickbush, T.H.2    Sandmeyer, S.B.3    Voytas, D.F.4
  • 10
    • 0021799352 scopus 로고
    • Ty elements transpose through an RNA intermediate
    • Boeke, J. D., Garfinkel C.A., Styles A., Fink G.R. 1985. Ty elements transpose through an RNA intermediate. Cell 40:491-500.
    • (1985) Cell , vol.40 , pp. 491-500
    • Boeke, J.D.1    Garfinkel, C.A.2    Styles, A.3    Fink, G.R.4
  • 11
    • 0002075936 scopus 로고    scopus 로고
    • Retrotransposons, endogenous retroviruses, the evolution of retroelements, p 343-435
    • In Coffin J.M., Hughes S.H., H. E. Varmus (ed.), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y
    • Boeke, J. D., Stoye J.P. 1997. Retrotransposons, endogenous retroviruses, the evolution of retroelements, p 343-435. In Coffin J.M., Hughes S.H., H. E. Varmus (ed.), Retroviruses. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
    • (1997) Retroviruses.
    • Boeke, J.D.1    Stoye, J.P.2
  • 12
    • 0032741264 scopus 로고    scopus 로고
    • Genomic analysis of Caenorhabditis elegans reveals ancient families of retroviral-like elements
    • Bowen, N. J., McDonald J.F. 1999. Genomic analysis of Caenorhabditis elegans reveals ancient families of retroviral-like elements. Genome Res. 9:924-935.
    • (1999) Genome Res. , vol.9 , pp. 924-935
    • Bowen, N.J.1    McDonald, J.F.2
  • 13
    • 0030426256 scopus 로고    scopus 로고
    • Human cytomegalovirus glycoproteins
    • Britt, W. J., Mach M. 1996. Human cytomegalovirus glycoproteins. Intervirology 39:401-412.
    • (1996) Intervirology , vol.39 , pp. 401-412
    • Britt, W.J.1    Mach, M.2
  • 14
    • 0028833057 scopus 로고
    • Active gypsy/Ty3 retrotransposons or retroviruses in Caenorhabditis elegans
    • Britten, R. J. 1995. Active gypsy/Ty3 retrotransposons or retroviruses in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 92:599-601.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 599-601
    • Britten, R.J.1
  • 15
    • 0025098497 scopus 로고
    • I transposable elements and I-R hybrid dysgenesis in Drosophila
    • Bucheton, A. 1990. I transposable elements and I-R hybrid dysgenesis in Drosophila. Trends Genet. 6:16-21.
    • (1990) Trends Genet. , vol.6 , pp. 16-21
    • Bucheton, A.1
  • 16
    • 0023351699 scopus 로고
    • The site-specific ribosomal insertion element type II of Bombyx mori (R2Bm) contains the coding sequence for a reverse transcriptase-like enzyme
    • Burke, W. D., Calalang C.C., Eickbush T.H. 1987. The site-specific ribosomal insertion element type II of Bombyx mori (R2Bm) contains the coding sequence for a reverse transcriptase-like enzyme. Mol. Cell. Biol. 7:2221-2230.
    • (1987) Mol. Cell. Biol. , vol.7 , pp. 2221-2230
    • Burke, W.D.1    Calalang, C.C.2    Eickbush, T.H.3
  • 17
    • 0032955930 scopus 로고    scopus 로고
    • The domain structure and retrotransposition mechanism of R2 elements are conserved throughout arthropods
    • Burke, W. D., Malik H.S., Jones J.P., Eickbush T.H. 1999. The domain structure and retrotransposition mechanism of R2 elements are conserved throughout arthropods. Mol. Biol. Evol. 16:502-511.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 502-511
    • Burke, W.D.1    Malik, H.S.2    Jones, J.P.3    Eickbush, T.H.4
  • 18
  • 19
    • 0022157359 scopus 로고
    • Sequence of Dictyostelium DIRS-1: an apparent retrotransposon with inverted terminal repeats and an internal circle junction sequence
    • Cappello, J., Handelsman K., Lodish H. 1985. Sequence of Dictyostelium DIRS-1: an apparent retrotransposon with inverted terminal repeats and an internal circle junction sequence. Cell 43:105-115.
    • (1985) Cell , vol.43 , pp. 105-115
    • Cappello, J.1    Handelsman, K.2    Lodish, H.3
  • 21
    • 0025810123 scopus 로고
    • Intron phylogeny: a new hypothesis
    • Cavalier-Smith, T. 1991. Intron phylogeny: a new hypothesis. Trends Genet. 7:145-148.
    • (1991) Trends Genet. , vol.7 , pp. 145-148
    • Cavalier-Smith, T.1
  • 22
    • 0024836563 scopus 로고
    • The population genetics of Drosophila transposable elements
    • Charlesworth, B., Langley C.H. 1989. The population genetics of Drosophila transposable elements. Annu. Rev. Genet. 23:251-287.
    • (1989) Annu. Rev. Genet. , vol.23 , pp. 251-287
    • Charlesworth, B.1    Langley, C.H.2
  • 23
    • 0034235829 scopus 로고    scopus 로고
    • Retrotransposition of the I factor, a non-long terminal repeat retrotransposon of Drosophila, generates tandem repeats at the 3' end
    • Chaboissier, M. C., Finnegan D., Bucheton A. 2000. Retrotransposition of the I factor, a non-long terminal repeat retrotransposon of Drosophila, generates tandem repeats at the 3' end. Nucleic Acids Res. 28:2467-2472.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 2467-2472
    • Chaboissier, M.C.1    Finnegan, D.2    Bucheton, A.3
  • 24
    • 0033959850 scopus 로고    scopus 로고
    • Tar- get specificity of the endonuclease from the Xenopus laevis non-long terminal repeat retrotransposon
    • Christensen, S., Pont-Kingdom G., Carroll D. 2000. Tar- get specificity of the endonuclease from the Xenopus laevis non-long terminal repeat retrotransposon. Tx1Mol L. Cell. Biol. 20:1219-1226.
    • (2000) Tx1Mol L. Cell. Biol. , vol.20 , pp. 1219-1226
    • Christensen, S.1    Pont-Kingdom, G.2    Carroll, D.3
  • 26
    • 0034143269 scopus 로고    scopus 로고
    • Systematic screening of Anopheles mosquito genomes yields evidence for a major clade of Pao-like retro- transposons
    • Cook, J. M., Martin J., Lewin A., Sinden R.E., Tristem M. 2000. Systematic screening of Anopheles mosquito genomes yields evidence for a major clade of Pao-like retro- transposons. Insect. Mol. Biol. 9:109-117.
    • (2000) Insect. Mol. Biol. , vol.9 , pp. 109-117
    • Cook, J.M.1    Martin, J.2    Lewin, A.3    Sinden, R.E.4    Tristem, M.5
  • 27
    • 0034720157 scopus 로고    scopus 로고
    • Retrotransposition of a bacterial group II intron
    • Cousineau, B., Lawrence S., Smith D., Belfort M. 2000. Retrotransposition of a bacterial group II intron. Nature 404: 1018-1021.
    • (2000) Nature , vol.404 , pp. 1018-1021
    • Cousineau, B.1    Lawrence, S.2    Smith, D.3    Belfort, M.4
  • 29
    • 0028886688 scopus 로고
    • Unity in transposition reactions
    • Craig, N. L. 1995. Unity in transposition reactions. Science 270:253-254.
    • (1995) Science , vol.270 , pp. 253-254
    • Craig, N.L.1
  • 30
    • 0028065747 scopus 로고
    • Transmission patterns of eukaryotic transposable elements: arguments for and against horizontal transfer
    • Cummings, M. 1994. Transmission patterns of eukaryotic transposable elements: arguments for and against horizontal transfer. Trends Ecol. Evol. 9:141-145.
    • (1994) Trends Ecol. Evol. , vol.9 , pp. 141-145
    • Cummings, M.1
  • 31
    • 0034616993 scopus 로고    scopus 로고
    • Three-dimensional structure of the Tn5 synaptic complex transposition intermediate
    • Davies, D. R., Goryshin I.Y., Reznikoff W.S., Rayment I. 2000. Three-dimensional structure of the Tn5 synaptic complex transposition intermediate. Science 289:77-85.
    • (2000) Science , vol.289 , pp. 77-85
    • Davies, D.R.1    Goryshin, I.Y.2    Reznikoff, W.S.3    Rayment, I.4
  • 32
    • 0000616288 scopus 로고
    • Nucleotide sequence of the transposable element BEL of Drosophila melanogaster
    • Davis, P. S., Judd B.H. 1995. Nucleotide sequence of the transposable element BEL of Drosophila melanogaster. Drosoph. Inf. Ser. 76:134-136.
    • (1995) Drosoph. Inf. Ser. , vol.76 , pp. 134-136
    • Davis, P.S.1    Judd, B.H.2
  • 33
    • 0026594519 scopus 로고
    • Unusual features of the retroid element PAT from the nematode Panagrellus redivivus
    • de Chastonay, Y., Felder H., Link C., Aeby P., Tobler H., Muller F. 1992. Unusual features of the retroid element PAT from the nematode Panagrellus redivivus. Nucleic Acids Res. 20:1623-1628.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 1623-1628
    • de Chastonay, Y.1    Felder, H.2    Link, C.3    Aeby, P.4    Tobler, H.5    Muller, F.6
  • 34
    • 0032944013 scopus 로고    scopus 로고
    • Mobilization of two retroelements, ZAM and Idefix, in a novel unstable line of Drosophila melanogas- ter
    • Desset, S., Conte C., Dimitri P., Calco V., Dastugue B., Vaury C. 1999. Mobilization of two retroelements, ZAM and Idefix, in a novel unstable line of Drosophila melanogas- ter. Mol. Biol. Evol. 16:54-66.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 54-66
    • Desset, S.1    Conte, C.2    Dimitri, P.3    Calco, V.4    Dastugue, B.5    Vaury, C.6
  • 35
    • 0028053230 scopus 로고
    • A proposed superfamily of transposase genes: transposon- like elements in ciliated protozoa and a common "D35E" motif
    • Doak, T. G., Doerder F.P., Jahn C.L., Herrick G. 1994. A proposed superfamily of transposase genes: transposon- like elements in ciliated protozoa and a common "D35E" motif. Proc. Natl. Acad. Sci. USA 91:942-946.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 942-946
    • Doak, T.G.1    Doerder, F.P.2    Jahn, C.L.3    Herrick, G.4
  • 37
    • 0033603539 scopus 로고    scopus 로고
    • Phylogenetic classification and the universal tree
    • Doolittle, W. F. 1999. Phylogenetic classification and the universal tree. Science 284:2124-2128.
    • (1999) Science , vol.284 , pp. 2124-2128
    • Doolittle, W.F.1
  • 38
    • 0030995360 scopus 로고    scopus 로고
    • A retrotransposon of the non-long terminal repeat class from the human blood fluke Schistosoma manson Similarities with the chicken repeat 1-like elements from vertebrates.
    • Drew, A. C., Brindley P.J. 1997. A retrotransposon of the non-long terminal repeat class from the human blood fluke Schistosoma mansoni. Similarities with the chicken repeat 1-like elements from vertebrates. Mol. Biol. Evol. 14: 602-610.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 602-610
    • Drew, A.C.1    Brindley, P.J.2
  • 39
    • 0026862794 scopus 로고
    • Transposing without ends: the non- LTR retrotransposable elements
    • Eickbush, T. H. 1992. Transposing without ends: the non- LTR retrotransposable elements. New Biol. 4:430-440.
    • (1992) New Biol. , vol.4 , pp. 430-440
    • Eickbush, T.H.1
  • 40
    • 0002687402 scopus 로고
    • Origin and evolutionary relationships of retroelements, p 121-157
    • In S.S. Morse (ed.), Raven Press, New York, N.Y
    • Eickbush, T. H. 1994. Origin and evolutionary relationships of retroelements, p 121-157. In S.S. Morse (ed.), TheEvolu- tionary Biology of Viruses. Raven Press, New York, N.Y.
    • (1994) TheEvolu- tionary Biology of Viruses.
    • Eickbush, T.H.1
  • 41
    • 0030848018 scopus 로고    scopus 로고
    • Telomerase and retrotransposons: which came first?
    • Eickbush, T. H. 1997. Telomerase and retrotransposons: which came first?. Science 277:911-912.
    • (1997) Science , vol.277 , pp. 911-912
    • Eickbush, T.H.1
  • 42
    • 0028870386 scopus 로고
    • Vertical transmission of the retrotransposable elements R1 and R2 during the evolution of the Drosophila melanogaster species subgroup
    • Eickbush, D. G., Eickbush T.H. 1995. Vertical transmission of the retrotransposable elements R1 and R2 during the evolution of the Drosophila melanogaster species subgroup. Genetics 139:671-684.
    • (1995) Genetics , vol.139 , pp. 671-684
    • Eickbush, D.G.1    Eickbush, T.H.2
  • 43
    • 0028894297 scopus 로고
    • R1 and R2 retrotransposable elements of Drosophila evolve at rates similar to that of nuclear genes
    • Eickbush, D. G., Lathe W.D., Francino M.P., Eickbush T.H. 1995. R1 and R2 retrotransposable elements of Drosophila evolve at rates similar to that of nuclear genes. Genetics 139:685-695.
    • (1995) Genetics , vol.139 , pp. 685-695
    • Eickbush, D.G.1    Lathe, W.D.2    Francino, M.P.3    Eickbush, T.H.4
  • 44
    • 0028067324 scopus 로고
    • The core and carboxyl-terminal domains of the integrase protein of human immunodeficiency virus type 1 each contribute to nonspecific DNA binding
    • Engelman, A., Hickman A.B., Craigie R. 1994. The core and carboxyl-terminal domains of the integrase protein of human immunodeficiency virus type 1 each contribute to nonspecific DNA binding. Virol J. 68:5911-5917.
    • (1994) Virol J. , vol.68 , pp. 5911-5917
    • Engelman, A.1    Hickman, A.B.2    Craigie, R.3
  • 45
    • 0030894573 scopus 로고    scopus 로고
    • Mobility of yeast mitochondrial group II introns: engineering a new site specificity and retrohoming via full reverse splicing
    • Eskes R., Yang J., Lambowitz A.M., Perlman P.S. 1997. Mobility of yeast mitochondrial group II introns: engineering a new site specificity and retrohoming via full reverse splicing. Cell 88:865-874.
    • (1997) Cell , vol.88 , pp. 865-874
    • Eskes, R.1    Yang, J.2    Lambowitz, A.M.3    Perlman, P.S.4
  • 46
    • 0034079713 scopus 로고    scopus 로고
    • Human LINE retrotransposons generate processed pseudogenes
    • Esnault, C., Maestre J., Heidmann T. 2000. Human LINE retrotransposons generate processed pseudogenes. Nat. Genet. 24:363-367.
    • (2000) Nat. Genet. , vol.24 , pp. 363-367
    • Esnault, C.1    Maestre, J.2    Heidmann, T.3
  • 47
    • 0022904750 scopus 로고
    • Transposable elements controlling I-R hybrid dysgenesis in D melanogaster are similar to mammalian LINEs.
    • Fawcett, D. H., Lister C.K., Kellett E., Finnegan D.J. 1986. Transposable elements controlling I-R hybrid dysgenesis in D. melanogaster are similar to mammalian LINEs. Cell 47:1007-1015.
    • (1986) Cell , vol.47 , pp. 1007-1015
    • Fawcett, D.H.1    Lister, C.K.2    Kellett, E.3    Finnegan, D.J.4
  • 48
    • 0025053617 scopus 로고
    • Functional similarities between retroviruses and the IS3 family of bacterial insertion sequences? Mol
    • Fayet, O., Raymond P., Polard P., Prere M.F., Chandler M. 1990. Functional similarities between retroviruses and the IS3 family of bacterial insertion sequences? Mol. Microbiol. 4:1771-1777.
    • (1990) Microbiol. , vol.4 , pp. 1771-1777
    • Fayet, O.1    Raymond, P.2    Polard, P.3    Prere, M.F.4    Chandler, M.5
  • 49
    • 0028102792 scopus 로고
    • Tas, a retrotransposon from the parasitic nematode Ascaris lumbricoides
    • Felder, H., Herzceg A., de Chastonay Y., Aeby P., Tobler H., Muller F. 1994. Tas, a retrotransposon from the parasitic nematode Ascaris lumbricoides. Gene 149:219-225.
    • (1994) Gene , vol.149 , pp. 219-225
    • Felder, H.1    Herzceg, A.2    de Chastonay, Y.3    Aeby, P.4    Tobler, H.5    Muller, F.6
  • 50
    • 0009969062 scopus 로고    scopus 로고
    • Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition
    • Feng, Q., Moran J.V., Kazazian H.H., Boeke J.D. 1996. Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition. Cell 87:905-916.
    • (1996) Cell , vol.87 , pp. 905-916
    • Feng, Q.1    Moran, J.V.2    Kazazian, H.H.3    Boeke, J.D.4
  • 51
    • 0032478313 scopus 로고    scopus 로고
    • Retrotransposon R1Bm endonuclease cleaves the target sequence
    • Feng, Q., Schumann G., Boeke J.D. 1998. Retrotransposon R1Bm endonuclease cleaves the target sequence. Proc. Natl. Acad. Sci. USA 95:2083-2088.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 2083-2088
    • Feng, Q.1    Schumann, G.2    Boeke, J.D.3
  • 52
    • 0002832117 scopus 로고
    • The I factor and I-R hybrid dysgenesis in Drosophila melanogaster, p 503-517
    • In D.E. Berg and M.M. Howe (ed.), American Society for Microbiology, Washington, D.C
    • Finnegan, D. J. 1989. The I factor and I-R hybrid dysgenesis in Drosophila melanogaster, p 503-517. In D.E. Berg and M.M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
    • (1989) Mobile DNA.
    • Finnegan, D.J.1
  • 54
    • 0025282331 scopus 로고
    • Gene organization and transcription of TED, a lepidopteran retrotransposon integrated within the baculovirus genome
    • Friesen, P. D., Nissen M.S. 1990. Gene organization and transcription of TED, a lepidopteran retrotransposon integrated within the baculovirus genome. Mol. Cell. Biol. 10: 3067-3077.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 3067-3077
    • Friesen, P.D.1    Nissen, M.S.2
  • 56
    • 0023080494 scopus 로고
    • The molecular biology of the hepatitis B viruses
    • Ganem, D., Varmus H.E. 1987. The molecular biology of the hepatitis B viruses. Annu. Rev. Biochem. 56:651-693.
    • (1987) Annu. Rev. Biochem. , vol.56 , pp. 651-693
    • Ganem, D.1    Varmus, H.E.2
  • 57
    • 0022129513 scopus 로고
    • Ty element transposition: reverse transcriptase and virus-like particles
    • Garfinkel, D. J., Boeke J.D., Fink G.R. 1985. Ty element transposition: reverse transcriptase and virus-like particles. Cell 42:507-517.
    • (1985) Cell , vol.42 , pp. 507-517
    • Garfinkel, D.J.1    Boeke, J.D.2    Fink, G.R.3
  • 58
    • 0024396241 scopus 로고
    • Composite transposable elements in the Xenopus laevis genome
    • Garrett, J., Knutzon D.S., Carroll D. 1989. Composite transposable elements in the Xenopus laevis genome. Mol. Cell. Biol. 9:3018-3027.
    • (1989) Mol. Cell. Biol. , vol.9 , pp. 3018-3027
    • Garrett, J.1    Knutzon, D.S.2    Carroll, D.3
  • 59
    • 0033048228 scopus 로고    scopus 로고
    • Evolutionofseaurchin retroviral-like (SURL) elements: evidence from 40 echinoid species
    • Gonzalez, P., Lessios H.A. 1999. Evolutionofseaurchin retroviral-like (SURL) elements: evidence from 40 echinoid species. Mol. Biol. Evol. 16:938-952.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 938-952
    • Gonzalez, P.1    Lessios, H.A.2
  • 60
    • 0028309650 scopus 로고
    • Self-splicing group I and group II introns encode homologous (putative) DNA endonucleases of a new family
    • Gorbalenya, A. E. 1994. Self-splicing group I and group II introns encode homologous (putative) DNA endonucleases of a new family. Protein Sci. 3:1117-1120.
    • (1994) Protein Sci. , vol.3 , pp. 1117-1120
    • Gorbalenya, A.E.1
  • 61
    • 0023724838 scopus 로고
    • Ty3, a yeast retrotransposon associated with tRNA genes, has homology to animal retroviruses
    • Hansen, L. J., Chalker D.L., Sandmeyer S.B. 1988. Ty3, a yeast retrotransposon associated with tRNA genes, has homology to animal retroviruses. Mol. Cell. Biol. 8: 5245-5256.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 5245-5256
    • Hansen, L.J.1    Chalker, D.L.2    Sandmeyer, S.B.3
  • 62
    • 0031571638 scopus 로고    scopus 로고
    • Structure of the RNA-dependent RNA polymerase of poliovirus
    • Hansen, J. L., Long A.M., Schultz S.C. 1997. Structure of the RNA-dependent RNA polymerase of poliovirus. Structure 5:1109-1122.
    • (1997) Structure , vol.5 , pp. 1109-1122
    • Hansen, J.L.1    Long, A.M.2    Schultz, S.C.3
  • 64
    • 0031468628 scopus 로고    scopus 로고
    • Modern thoughts on an ancyent marinere: function, evolution, regulation
    • Hartl, D. L., Lohe A.R., Lozovskya E.R. 1997. Modern thoughts on an ancyent marinere: function, evolution, regulation. Annu. Rev. Genet. 31:337-358.
    • (1997) Annu. Rev. Genet. , vol.31 , pp. 337-358
    • Hartl, D.L.1    Lohe, A.R.2    Lozovskya, E.R.3
  • 65
    • 0022470485 scopus 로고
    • L1 family of repetitive DNA sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein
    • Hattori, M., Kuhara S., Takenaka O., Sakaki Y. 1986. L1 family of repetitive DNA sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein. Nature 321:625-628.
    • (1986) Nature , vol.321 , pp. 625-628
    • Hattori, M.1    Kuhara, S.2    Takenaka, O.3    Sakaki, Y.4
  • 66
    • 0031010332 scopus 로고    scopus 로고
    • Zepp, a LINE-like retrotransposon accumulated in the Chorella telomeric region
    • Higashiyama, T., Noutoshi Y., Fujie M., Yamada T. 1997. Zepp, a LINE-like retrotransposon accumulated in the Chorella telomeric region. EMBO J. 16:3715-3723.
    • (1997) EMBO J. , vol.16 , pp. 3715-3723
    • Higashiyama, T.1    Noutoshi, Y.2    Fujie, M.3    Yamada, T.4
  • 67
    • 85158039232 scopus 로고    scopus 로고
    • Sequence-specific singlestranded RNA binding protein encoded by the human LINE- 1 protein and RNA
    • Hohjoh, H., Singer M.F. 1997. Sequence-specific singlestranded RNA binding protein encoded by the human LINE- 1 protein and RNA. EMBO J. 15:630-639.
    • (1997) EMBO J. , vol.15 , pp. 630-639
    • Hohjoh, H.1    Singer, M.F.2
  • 68
    • 0027515245 scopus 로고
    • The retron: a bacterial re- troelement required for the synthesis of msDNA
    • Inouye, S., Inouye M. 1993. The retron: a bacterial re- troelement required for the synthesis of msCurr DNA. Opin. Genet. Dev. 3:713-718.
    • (1993) Curr. Opin. Genet. Dev. , vol.3 , pp. 713-718
    • Inouye, S.1    Inouye, M.2
  • 69
    • 0025908033 scopus 로고
    • An indicator gene for detection of germline retrotransposition in transgenic Drosophila demonstrates RNA-mediated transposition of the LINE I element
    • Jensen, S., Heidmann T. 1991. An indicator gene for detection of germline retrotransposition in transgenic Drosophila demonstrates RNA-mediated transposition of the LINE I element. EMBO J. 10:1927-1937.
    • (1991) EMBO J. , vol.10 , pp. 1927-1937
    • Jensen, S.1    Heidmann, T.2
  • 70
    • 0033607206 scopus 로고    scopus 로고
    • Evidence for the recent horizontal transfer of long terminal repeat retrotransposon
    • Jordan, I. K., Matyunia L.V., McDonald J.F. 1999. Evidence for the recent horizontal transfer of long terminal repeat retrotransposon. Proc. Natl. Acad. Sci. USA 96: 12621-12625.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 12621-12625
    • Jordan, I.K.1    Matyunia, L.V.2    McDonald, J.F.3
  • 71
    • 0030731154 scopus 로고    scopus 로고
    • Determina- tion of the entire sequence of turtle CR1: the first open reading frame of the turtle CR1 element encodes a protein with a novel zinc finger motif
    • Kajikawa, M., Ohshima K., Okada N. 1997. Determina- tion of the entire sequence of turtle CR1: the first open reading frame of the turtle CR1 element encodes a protein with a novel zinc finger motif. Mol. Biol. Evol. 14:1206-1217.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 1206-1217
    • Kajikawa, M.1    Ohshima, K.2    Okada, N.3
  • 72
    • 17344370076 scopus 로고    scopus 로고
    • The impact of L1 retrotransposition on the human genome
    • Kazazian, H. H., Moran J.V. 1998. The impact of L1 retrotransposition on the human genome. Nat. Genet. 19: 19-24.
    • (1998) Nat. Genet. , vol.19 , pp. 19-24
    • Kazazian, H.H.1    Moran, J.V.2
  • 73
    • 0026035178 scopus 로고
    • Retroviral integrase domains: DNA binding and the recognition of LTR sequences
    • Khan, E., Mack J.P., Katz R.A., Kulkosky J., Skalka A.M. 1991. Retroviral integrase domains: DNA binding and the recognition of LTR sequences. Nucleic Acids Res. 19:851-860.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 851-860
    • Khan, E.1    Mack, J.P.2    Katz, R.A.3    Kulkosky, J.4    Skalka, A.M.5
  • 74
    • 0031832807 scopus 로고    scopus 로고
    • Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence
    • Kim, J. M., Vanguri S., Boeke J.D., Gabriel A., Voytas D.F. 1998. Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res. 8:464-478.
    • (1998) Genome Res. , vol.8 , pp. 464-478
    • Kim, J.M.1    Vanguri, S.2    Boeke, J.D.3    Gabriel, A.4    Voytas, D.F.5
  • 75
    • 0023131902 scopus 로고
    • Ingi, a 5.2-kilobase dispersed sequence element from Trypanosoma brucei that carries half a smaller mobile element at their end and has homology with mammalian LINEs
    • Kimmel, B. E., Ole-Moiyoi O.K., Young J.R. 1987. Ingi, a 5.2-kilobase dispersed sequence element from Trypanosoma brucei that carries half a smaller mobile element at their end and has homology with mammalian LINEs. Mol. Cell. Biol. 7:1465-1475.
    • (1987) Mol. Cell. Biol. , vol.7 , pp. 1465-1475
    • Kimmel, B.E.1    Ole-Moiyoi, O.K.2    Young, J.R.3
  • 76
    • 0026693137 scopus 로고
    • Crystal structure at 3.5 angstrom resolution of HIV-1 reverse transcriptase complexed with an inhibitor
    • Kohlstaedt, L. A., Wang J., Friedman J.M., Rice P.A., Steitz T.A. 1992. Crystal structure at 3.5 angstrom resolution of HIV-1 reverse transcriptase complexed with an inhibitor. Science 256:1783-1790.
    • (1992) Science , vol.256 , pp. 1783-1790
    • Kohlstaedt, L.A.1    Wang, J.2    Friedman, J.M.3    Rice, P.A.4    Steitz, T.A.5
  • 77
    • 0026333509 scopus 로고
    • Diverse groups of plant RNA and DNA viruses share related movement proteins that may possess chaperonelike activity
    • Koonin, E. V., Mushegian A.R., Ryabov E.V., Dolja V.V. 1991. Diverse groups of plant RNA and DNA viruses share related movement proteins that may possess chaperonelike activity. Gen J. Virol. 72:2895-2903.
    • (1991) Gen J. Virol. , vol.72 , pp. 2895-2903
    • Koonin, E.V.1    Mushegian, A.R.2    Ryabov, E.V.3    Dolja, V.V.4
  • 78
    • 0032168623 scopus 로고    scopus 로고
    • Unusual horizontal transfer of a long interspersed nuclear element between distant vertebrate classes
    • Kordis, D., Gusenbek F. 1998. Unusual horizontal transfer of a long interspersed nuclear element between distant vertebrate classes. Proc. Natl. Acad. Sci. USA 95: 10704-10709.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 10704-10709
    • Kordis, D.1    Gusenbek, F.2
  • 79
    • 0026719238 scopus 로고
    • Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and the bacterial insertion sequence transposases
    • Kulkosky, J., Jones K.S., Katz R.A., Mack J.P.G., Skalka A.M. 1992. Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and the bacterial insertion sequence transposases. Mol. Cell. Biol. 12:2331-2338.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 2331-2338
    • Kulkosky, J.1    Jones, K.S.2    Katz, R.A.3    Mack, J.P.G.4    Skalka, A.M.5
  • 82
    • 0032499714 scopus 로고    scopus 로고
    • SIRE- I, a copia/Ty1-like retroelement from soybean, encodes a retroviral envelope-like protein
    • Laten, H. M., Majumdar A., Gaucher E.A. 1998. SIRE- I, a copia/Ty1-like retroelement from soybean, encodes a retroviral envelope-like protein. Proc. Natl. Acad. Sci. USA 95:6897-6902.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 6897-6902
    • Laten, H.M.1    Majumdar, A.2    Gaucher, E.A.3
  • 83
    • 0028845208 scopus 로고
    • Evolutionary stability of the R1 retrotransposable element in the genus Drosophila
    • Lathe, W. C., Burke W.D., Eickbush T.H. 1995. Evolutionary stability of the R1 retrotransposable element in the genus Drosophila. Mol. Biol. Evol. 12:1094-1105.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 1094-1105
    • Lathe, W.C.1    Burke, W.D.2    Eickbush, T.H.3
  • 84
    • 0030782396 scopus 로고    scopus 로고
    • A single lineage of R2 retrotransposable elements is an active, evolutionarily stable component of the Drosophila rDNA locus
    • Lathe, W. C., III, Eickbush T.H. 1997. A single lineage of R2 retrotransposable elements is an active, evolutionarily stable component of the Drosophila rDNA locus. Mol. Biol. Evol. 14:1232-1241.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 1232-1241
    • Lathe I.I.I, W.C.1    Eickbush, T.H.2
  • 85
    • 0032871097 scopus 로고    scopus 로고
    • Retrotransposons and retroviruses: analysis of the envelope gene
    • Lerat, E., Capy P. 1999. Retrotransposons and retroviruses: analysis of the envelope gene. Mol. Biol. Evol. 16: 1198-1207.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1198-1207
    • Lerat, E.1    Capy, P.2
  • 86
    • 0027759230 scopus 로고
    • So, what about the molecular clock hypothesis? Curr
    • Li, W. H. 1993. So, what about the molecular clock hypothesis? Curr. Opin. Genet. Dev. 3:896-901.
    • (1993) Opin. Genet. Dev. , vol.3 , pp. 896-901
    • Li, W.H.1
  • 87
    • 0034087114 scopus 로고    scopus 로고
    • Characterization and genomic analysis of tobacco vein clearing virus, a plant pararetrovirus that is transmitted vertically and related to sequences integrated in the host genome
    • Lockhart, B. E., Menke J., Dahal G., Olszewski N.E. 2000. Characterization and genomic analysis of tobacco vein clearing virus, a plant pararetrovirus that is transmitted vertically and related to sequences integrated in the host genome. Gen J. Virol. 81:1579-1585.
    • (2000) Gen J. Virol. , vol.81 , pp. 1579-1585
    • Lockhart, B.E.1    Menke, J.2    Dahal, G.3    Olszewski, N.E.4
  • 89
    • 0029058441 scopus 로고
    • RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element
    • Luan, D. D., Eickbush T.H. 1995. RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element. Mol. Cell. Biol. 15: 3882-3891.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 3882-3891
    • Luan, D.D.1    Eickbush, T.H.2
  • 90
    • 0029741802 scopus 로고    scopus 로고
    • Downstream 28S gene sequences on the RNA template affect the choice of primer and the accuracy of initiation by the R2 reverse transcriptase
    • Luan, D. D., Eickbush T.H. 1996. Downstream 28S gene sequences on the RNA template affect the choice of primer and the accuracy of initiation by the R2 reverse transcriptase. Mol. Cell. Biol. 16:4726-4734.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 4726-4734
    • Luan, D.D.1    Eickbush, T.H.2
  • 91
    • 0027450385 scopus 로고
    • Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition
    • Luan, D. D., Korman M.H., Jakubczak J.L., Eickbush T.H. 1993. Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition. Cell 72:595-605.
    • (1993) Cell , vol.72 , pp. 595-605
    • Luan, D.D.1    Korman, M.H.2    Jakubczak, J.L.3    Eickbush, T.H.4
  • 92
    • 0032976398 scopus 로고    scopus 로고
    • The age and evolution of non-LTR retrotransposable elements
    • Malik, H. S., Burke W.D., Eickbush T.H. 1999. The age and evolution of non-LTR retrotransposable elements. Mol. Biol. Evol. 16:793-805.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 793-805
    • Malik, H.S.1    Burke, W.D.2    Eickbush, T.H.3
  • 93
    • 0031857142 scopus 로고    scopus 로고
    • The RTE class of non-LTR retrotransposons is widely distributed in animals and is the origin of many SINEs
    • Malik, H. S., Eickbush T.H. 1999. The RTE class of non-LTR retrotransposons is widely distributed in animals and is the origin of many SINEs. Mol. Biol. Evol. 15: 1123-1134.
    • (1999) Mol. Biol. Evol. , vol.15 , pp. 1123-1134
    • Malik, H.S.1    Eickbush, T.H.2
  • 94
    • 0033057257 scopus 로고    scopus 로고
    • Modular evolution of the integrase domain in the Ty3/Gypsy class of LTR retro- transposons
    • Malik, H. S., Eickbush T.H. 1999. Modular evolution of the integrase domain in the Ty3/Gypsy class of LTR retro- transposons. Virol J. 73:5186-5190.
    • (1999) Virol J. , vol.73 , pp. 5186-5190
    • Malik, H.S.1    Eickbush, T.H.2
  • 95
    • 0033966338 scopus 로고    scopus 로고
    • NeSL-1, an ancient lineage of site-specific non-LTR retrotransposons from Caenorhabditis elegans
    • Malik, H. S., Eickbush T.H. 2000. NeSL-1, an ancient lineage of site-specific non-LTR retrotransposons from Caenorhabditis elegans. Genetics 154:193-203.
    • (2000) Genetics , vol.154 , pp. 193-203
    • Malik, H.S.1    Eickbush, T.H.2
  • 96
    • 0034917751 scopus 로고    scopus 로고
    • Phylogenetic analysis of ribonuclease H domains suggests a late, chimeric origin of LTR retrotransposable elements and retroviruses
    • Malik, H. S., Eickbush T.H. 2001. Phylogenetic analysis of ribonuclease H domains suggests a late, chimeric origin of LTR retrotransposable elements and retroviruses. Genome Res. 11:1187-1197.
    • (2001) Genome Res. , vol.11 , pp. 1187-1197
    • Malik, H.S.1    Eickbush, T.H.2
  • 97
    • 0033799581 scopus 로고    scopus 로고
    • Poised for contagion: evolutionary origins of the infectious abilities of invertebrate retroviruses
    • Malik, H. S., Henikoff S., Eickbush T.H. 2000. Poised for contagion: evolutionary origins of the infectious abilities of invertebrate retroviruses. Genome Res. 10:1307-1318.
    • (2000) Genome Res. , vol.10 , pp. 1307-1318
    • Malik, H.S.1    Henikoff, S.2    Eickbush, T.H.3
  • 98
    • 0343090765 scopus 로고    scopus 로고
    • Ty3/Gypsy retrotranspo- sons: description of new Arabidopsis thaliana elements and evolutionary perspectives derived from comparative genomic data
    • Marin, I., Llorens C. 2000. Ty3/Gypsy retrotranspo- sons: description of new Arabidopsis thaliana elements and evolutionary perspectives derived from comparative genomic data. Mol. Biol. Evol. 17:1040-1049.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 1040-1049
    • Marin, I.1    Llorens, C.2
  • 99
    • 0031762153 scopus 로고    scopus 로고
    • Evolutionary relationships among the members of an ancient class on non-LTR retrotransposons found in the nematode Caenorhabditis elegans
    • Marin, I., Plata-Rengifo P., Labrador M., Fontdevila A. 1998. Evolutionary relationships among the members of an ancient class on non-LTR retrotransposons found in the nematode Caenorhabditis elegans. Mol. Biol. Evol. 15: 1390-1402.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1390-1402
    • Marin, I.1    Plata-Rengifo, P.2    Labrador, M.3    Fontdevila, A.4
  • 100
    • 0022650639 scopus 로고
    • The Drosophila melanogaster gypsy transposable element encodes putative gene products homologous to retroviral proteins
    • Marlor, R., Parkhurst S., Corces V. 1986. The Drosophila melanogaster gypsy transposable element encodes putative gene products homologous to retroviral proteins. Mol. Cell. Biol. 6:1129-1134.
    • (1986) Mol. Cell. Biol. , vol.6 , pp. 1129-1134
    • Marlor, R.1    Parkhurst, S.2    Corces, V.3
  • 101
    • 0028902026 scopus 로고
    • Characterization of a non-long terminal repeat retrotransposon cDNA (L1Tc) from Trypanosoma cruzi: homology of the first ORF with the Ape family of DNA repair enzymes
    • Martin, F., Maranon C., Olivares M., Alonso C., Lopez M.C. 1995. Characterization of a non-long terminal repeat retrotransposon cDNA (L1Tc) from Trypanosoma cruzi: homology of the first ORF with the Ape family of DNA repair enzymes. Mol J. Biol. 247:49-59.
    • (1995) Mol J. Biol. , vol.247 , pp. 49-59
    • Martin, F.1    Maranon, C.2    Olivares, M.3    Alonso, C.4    Lopez, M.C.5
  • 103
    • 0025996907 scopus 로고
    • Evolution of retroposons by acquisition or deletion of retrovirus-like genes
    • McClure, M. A. 1991. Evolution of retroposons by acquisition or deletion of retrovirus-like genes. Mol. Biol. Evol. 8: 835-856.
    • (1991) Mol. Biol. Evol. , vol.8 , pp. 835-856
    • McClure, M.A.1
  • 104
    • 0029066770 scopus 로고
    • Structure and activities of group II introns
    • Michel, F., Ferat J.-L. 1995. Structure and activities of group II introns. Annu. Rev. Biochem. 64:435-461.
    • (1995) Annu. Rev. Biochem. , vol.64 , pp. 435-461
    • Michel, F.1    Ferat, J.-L.2
  • 105
    • 0024297806 scopus 로고
    • Jockey, a mobile Drosophila element similar to mammalian LINEs, is transcribed from the internal promoter by RNA polymerase II
    • Mizrokhi, L. J., Georgieva S.G., Ilyin Y.V. 1988. Jockey, a mobile Drosophila element similar to mammalian LINEs, is transcribed from the internal promoter by RNA polymerase II. Cell 54:685-691.
    • (1988) Cell , vol.54 , pp. 685-691
    • Mizrokhi, L.J.1    Georgieva, S.G.2    Ilyin, Y.V.3
  • 106
    • 0025642432 scopus 로고
    • Evidence for horizontal transmission of the mobile elementjockey between distant Drosophila species
    • Mizrokhi, L. J., Mazo A.M. 1990. Evidence for horizontal transmission of the mobile elementjockey between distant Drosophila species. Proc. Natl. Acad. Sci. USA 86: 9216-9220.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 9216-9220
    • Mizrokhi, L.J.1    Mazo, A.M.2
  • 107
    • 0026637325 scopus 로고
    • Transpositional recombination: mechanistic insights from studies of mu and other elements
    • Mizuuchi, K. 1992. Transpositional recombination: mechanistic insights from studies of mu and other elements. Annu. Rev. Biochem. 61:1011-1051.
    • (1992) Annu. Rev. Biochem. , vol.61 , pp. 1011-1051
    • Mizuuchi, K.1
  • 109
    • 0021879662 scopus 로고
    • Complete nucleotide sequence of the Drosophila transposable element copia: homology between copia and retroviral proteins
    • Mount, S. M., Rubin G.M. 1985. Complete nucleotide sequence of the Drosophila transposable element copia: homology between copia and retroviral proteins. Mol. Cell. Biol. 5:1630-1638.
    • (1985) Mol. Cell. Biol. , vol.5 , pp. 1630-1638
    • Mount, S.M.1    Rubin, G.M.2
  • 110
    • 0032489351 scopus 로고    scopus 로고
    • Reversing time: origin of telomerase
    • Nakamura, T. M., Cech T.R. 1998. Reversing time: origin of telomerase. Cell 92:587-600.
    • (1998) Cell , vol.92 , pp. 587-600
    • Nakamura, T.M.1    Cech, T.R.2
  • 112
    • 0031027784 scopus 로고    scopus 로고
    • The 3' ends of tRNA- derived SINEs originated from the 3' ends of LINEs: a example from the bovine genome
    • Okada, N., Hamada M. 1997. The 3' ends of tRNA- derived SINEs originated from the 3' ends of LINEs: a example from the bovine genome. Mol J. Evol. 44:S52-S56.
    • (1997) Mol J. Evol. , vol.44 , pp. S52-S56
    • Okada, N.1    Hamada, M.2
  • 113
    • 0031593205 scopus 로고    scopus 로고
    • SINEs and LINEs share common 3' sequences: a review
    • Okada, N., Hamada M., Ogiwara I., Ohshima K. 1997. SINEs and LINEs share common 3' sequences: a review. Gene 205:229-243.
    • (1997) Gene , vol.205 , pp. 229-243
    • Okada, N.1    Hamada, M.2    Ogiwara, I.3    Ohshima, K.4
  • 114
    • 0029069498 scopus 로고
    • Structural analysis of TRAS1, a novel family of telomeric repeat-associated retrotransposons in the silkworm, Bombyx mori
    • Okazaki, S., Ishikawa H., Fujiwara H. 1995. Structural analysis of TRAS1, a novel family of telomeric repeat-associated retrotransposons in the silkworm, Bombyx mori. Mol. Cell. Biol. 15:4545-4552.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 4545-4552
    • Okazaki, S.1    Ishikawa, H.2    Fujiwara, H.3
  • 116
    • 0033010026 scopus 로고    scopus 로고
    • The retrotransposon Osvaldo from Drosophila buzzatii displays all structural features of a functional retrovirus
    • Pantazidis, A., Labrador M., Fontdevila A. 1999. The retrotransposon Osvaldo from Drosophila buzzatii displays all structural features of a functional retrovirus. Mol. Biol. Evol. 16:909-921.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 909-921
    • Pantazidis, A.1    Labrador, M.2    Fontdevila, A.3
  • 117
    • 0025778140 scopus 로고
    • Evidence for retrotransposition of the I factor, a LINE element of Drosophila melanogaster
    • Pelisson, A., Finnegan D.J., Bucheton A. 1991. Evidence for retrotransposition of the I factor, a LINE element of Drosophila melanogaster. Proc. Natl. Acad. Sci. USA 88: 4907-4910.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 4907-4910
    • Pelisson, A.1    Finnegan, D.J.2    Bucheton, A.3
  • 119
    • 0029856377 scopus 로고    scopus 로고
    • High intrinsic rate of DNA loss in Drosophila
    • Petrov, D. A., Lozovskaya E.L., Hartl D.L. 1996. High intrinsic rate of DNA loss in Drosophila. Nature 384: 346-349.
    • (1996) Nature , vol.384 , pp. 346-349
    • Petrov, D.A.1    Lozovskaya, E.L.2    Hartl, D.L.3
  • 120
    • 0020788833 scopus 로고
    • Involvement of reverse transcription in the replication of cauliflower mosaic virus: a detailed model and test of some aspects
    • Pfeiffer, P., Hohn T. 1983. Involvement of reverse transcription in the replication of cauliflower mosaic virus: a detailed model and test of some aspects. Cell 33:781-789.
    • (1983) Cell , vol.33 , pp. 781-789
    • Pfeiffer, P.1    Hohn, T.2
  • 121
    • 0031572266 scopus 로고    scopus 로고
    • Petunia vein-clearing virus: a plant pararetrovirus with the core sequences for an integrase function
    • Richert-Poggeler, K. R., Shepherd R.J. 1997. Petunia vein-clearing virus: a plant pararetrovirus with the core sequences for an integrase function. Virology 236:137-146.
    • (1997) Virology , vol.236 , pp. 137-146
    • Richert-Poggeler, K.R.1    Shepherd, R.J.2
  • 122
    • 0027398902 scopus 로고
    • The mariner transposable element is widespread in insects
    • Robertson, H. M. 1993. The mariner transposable element is widespread in insects. Nature 362:241-245.
    • (1993) Nature , vol.362 , pp. 241-245
    • Robertson, H.M.1
  • 123
    • 0021895321 scopus 로고
    • The origin and evolution of retroposons
    • Rogers, J. 1985. The origin and evolution of retroposons. Int. Rev. Cytol. 93:187-279.
    • (1985) Int. Rev. Cytol. , vol.93 , pp. 187-279
    • Rogers, J.1
  • 125
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou, N., Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 126
    • 0000554795 scopus 로고
    • Cin4, an insert altering the structure of the A1 gene in Zea mays, exhibits properties of nonviral retrotransposons
    • Schwarz-Sommer, Z., Leclercq L., Gobel E., Saedler H. 1987. Cin4, an insert altering the structure of the A1 gene in Zea mays, exhibits properties of nonviral retrotransposons. EMBO J. 6:3873-3880.
    • (1987) EMBO J. , vol.6 , pp. 3873-3880
    • Schwarz-Sommer, Z.1    Leclercq, L.2    Gobel, E.3    Saedler, H.4
  • 127
    • 0028151655 scopus 로고
    • Amino acid sequence motif of group I intron endonucleases is conserved in open reading frames of group II introns
    • Shub, D. A., Goodrich-Blair H., Eddy S.R. 1994. Amino acid sequence motif of group I intron endonucleases is conserved in open reading frames of group II introns. Trends Biochem. Sci. 19:402-406.
    • (1994) Trends Biochem. Sci. , vol.19 , pp. 402-406
    • Shub, D.A.1    Goodrich-Blair, H.2    Eddy, S.R.3
  • 128
    • 0032942348 scopus 로고    scopus 로고
    • High-frequency retrotransposition of a marked I factor in Drosophila melanogaster correlates with a dynamic expression pattern of the ORF1 protein in the cytoplasm of oocytes
    • Seleme, M.-D.C., Busseau I., Malinsky S., Bucheton A., Teninges D. 1999. High-frequency retrotransposition of a marked I factor in Drosophila melanogaster correlates with a dynamic expression pattern of the ORF1 protein in the cytoplasm of oocytes. Genetics 151:761-771.
    • (1999) Genetics , vol.151 , pp. 761-771
    • Seleme, M.-D.C.1    Busseau, I.2    Malinsky, S.3    Bucheton, A.4    Teninges, D.5
  • 129
    • 0028568045 scopus 로고
    • Transposition of the LINE-like retrotransposon TART to Drosophila chromosome termini
    • Sheen, F. M., Levis R.W. 1994. Transposition of the LINE-like retrotransposon TART to Drosophila chromosome termini. Proc. Natl. Acad. Sci. USA 91:12510-12514.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 12510-12514
    • Sheen, F.M.1    Levis, R.W.2
  • 130
    • 0020663784 scopus 로고
    • Retrovirus-like particles containing RNA homologous to the transposable element copia in Drosophila melanogaster
    • Shiba, T., Saigo K. 1983. Retrovirus-like particles containing RNA homologous to the transposable element copia in Drosophila melanogaster. Nature 302:119-124.
    • (1983) Nature , vol.302 , pp. 119-124
    • Shiba, T.1    Saigo, K.2
  • 131
    • 0000427128 scopus 로고
    • Making sense out of LINEs: long interspersed repeat sequences in mammalian genomes
    • Singer, M. F., Skowronski J. 1985. Making sense out of LINEs: long interspersed repeat sequences in mammalian genomes. Trends Biochem. Sci. 10:119-122.
    • (1985) Trends Biochem. Sci. , vol.10 , pp. 119-122
    • Singer, M.F.1    Skowronski, J.2
  • 132
    • 0030479536 scopus 로고    scopus 로고
    • The origin of interspersed repeats in the human genome
    • Smit, A. F. 1996. The origin of interspersed repeats in the human genome. Curr. Opin. Genet. Dev. 6:743-748.
    • (1996) Curr. Opin. Genet. Dev. , vol.6 , pp. 743-748
    • Smit, A.F.1
  • 133
    • 0032784908 scopus 로고    scopus 로고
    • Interspersed repeats and other mementos of transposable elements in mammalian genomes
    • Smit, A. F. 1999. Interspersed repeats and other mementos of transposable elements in mammalian genomes. Curr. Opin. Genet. Dev. 9:657-663.
    • (1999) Curr. Opin. Genet. Dev. , vol.9 , pp. 657-663
    • Smit, A.F.1
  • 134
    • 0027992609 scopus 로고
    • An env-like protein encoded by a Drosophila retroelement: evidence that gypsy is an infectious retrovirus
    • Song, S. U., Gerasimova T., Kurkulos M., Boeke J.D., Corces V.G. 1994. An env-like protein encoded by a Drosophila retroelement: evidence that gypsy is an infectious retrovirus. Genes Dev. 8:2046-2057.
    • (1994) Genes Dev. , vol.8 , pp. 2046-2057
    • Song, S.U.1    Gerasimova, T.2    Kurkulos, M.3    Boeke, J.D.4    Corces, V.G.5
  • 135
    • 0028967345 scopus 로고
    • Phylogeny, rates of evolution, patterns of codon usage among sea urchin retroviral-like elements, with implications for the recognition of horizontal transfer
    • Springer, M. S., Tusneem N.A., Davidson E.H., Britten R.J. 1995. Phylogeny, rates of evolution, patterns of codon usage among sea urchin retroviral-like elements, with implications for the recognition of horizontal transfer. Mol. Biol. Evol. 12:219-230.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 219-230
    • Springer, M.S.1    Tusneem, N.A.2    Davidson, E.H.3    Britten, R.J.4
  • 136
    • 0025223152 scopus 로고
    • Identification, characterization, cell specificity of a human LINE-1 promoter
    • Swergold, G. D. 1990. Identification, characterization, cell specificity of a human LINE-1 promoter. Mol. Cell. Biol. 10:6718-6729.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 6718-6729
    • Swergold, G.D.1
  • 138
    • 0028906536 scopus 로고
    • Bovine Alu-like sequences mediate transposition of a new site-specific retroelement
    • Szemraj, J., Plucienniczak G., Jaworski J., Plucienniczak A. 1995. Bovine Alu-like sequences mediate transposition of a new site-specific retroelement. Gene 152:261-264.
    • (1995) Gene , vol.152 , pp. 261-264
    • Szemraj, J.1    Plucienniczak, G.2    Jaworski, J.3    Plucienniczak, A.4
  • 139
    • 0030879327 scopus 로고    scopus 로고
    • A new family of site-specific retrotransposons, SART1, is inserted into telomeric repeats of the silkworm, Bombyx mori
    • Takahashi, H., Okazaki S., Fujiwara H. 1997. A new family of site-specific retrotransposons, SART1, is inserted into telomeric repeats of the silkworm, Bombyx mori. Nucleic Acids Res. 25:1578-1584.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 1578-1584
    • Takahashi, H.1    Okazaki, S.2    Fujiwara, H.3
  • 140
    • 0019812898 scopus 로고
    • Comparison between the viral transforming gene (src) of recovered avian sarcoma virus and its cellular homolog
    • Takeya, T., Hanafusa H., Junghans R.P., Ju G., Skalka A.M. 1981. Comparison between the viral transforming gene (src) of recovered avian sarcoma virus and its cellular homolog. Mol. Cell. Biol. 1:1024-1037.
    • (1981) Mol. Cell. Biol. , vol.1 , pp. 1024-1037
    • Takeya, T.1    Hanafusa, H.2    Junghans, R.P.3    Ju, G.4    Skalka, A.M.5
  • 141
    • 0024978332 scopus 로고
    • Retrons in bacteria
    • Temin, H. M. 1989. Retrons in bacteria. Nature 339: 254-255.
    • (1989) Nature , vol.339 , pp. 254-255
    • Temin, H.M.1
  • 142
    • 0034034265 scopus 로고    scopus 로고
    • Evolution of the Gypsy endogenous retrovirus in the Drosophila melanogaster subgroup
    • Terzian, C., Ferraz C., Demaille J., Bucheton A. 2000. Evolution of the Gypsy endogenous retrovirus in the Drosophila melanogaster subgroup. Mol. Biol. Evol. 17:908-914.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 908-914
    • Terzian, C.1    Ferraz, C.2    Demaille, J.3    Bucheton, A.4
  • 143
    • 0025772874 scopus 로고
    • Short leader sequences may be transferred from small RNAs to pre-mature mRNAs by trans-splicing in Euglena
    • Tessier L.H., Keller M., Chan R.L., Fournier R., Weil J.H., Imbault P. 1991. Short leader sequences may be transferred from small RNAs to pre-mature mRNAs by trans-splicing in Euglena. EMBO J. 10:2621-2625.
    • (1991) EMBO J. , vol.10 , pp. 2621-2625
    • Tessier, L.H.1    Keller, M.2    Chan, R.L.3    Fournier, R.4    Weil, J.H.5    Imbault, P.6
  • 144
    • 0028925748 scopus 로고
    • Tightly regulated, developmentally specific expression of the first open reading frame from LINE-1 during mouse embryogenesis
    • Trelogan, S. A., Martin S.L. 1995. Tightly regulated, developmentally specific expression of the first open reading frame from LINE-1 during mouse embryogenesis. Proc. Natl. Acad. Sci. USA 92:1520-1524.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 1520-1524
    • Trelogan, S.A.1    Martin, S.L.2
  • 145
    • 0028854289 scopus 로고
    • L1 (LINE-1) retrotransposable elements provide a "fossil" record of the phylogenetic history of murid rodents
    • Usdin, K., Chevret P., Catzeflis F.M., Verona R., Furano A.V. 1995. L1 (LINE-1) retrotransposable elements provide a "fossil" record of the phylogenetic history of murid rodents. Mol. Biol. Evol. 12:73-82.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 73-82
    • Usdin, K.1    Chevret, P.2    Catzeflis, F.M.3    Verona, R.4    Furano, A.V.5
  • 146
    • 0002915381 scopus 로고
    • Retroviruses, p 53-108
    • In D.E. Berg and M.M. Howe (ed.), American Society for Microbiology, Washington, D.C
    • Varmus, H., Brown P. 1989. Retroviruses, p 53-108. In D.E. Berg and M.M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D.C.
    • (1989) Mobile DNA.
    • Varmus, H.1    Brown, P.2
  • 148
    • 0032530173 scopus 로고    scopus 로고
    • Determining and dating recent rodent speciation events by using L1 (LINE-1) retrotransposons
    • Verneau, O., Catzeflis F., Furano A.V. 1998. Determining and dating recent rodent speciation events by using L1 (LINE-1) retrotransposons. Proc. Natl. Acad. Sci. USA 95: 11284-11289.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 11284-11289
    • Verneau, O.1    Catzeflis, F.2    Furano, A.V.3
  • 149
    • 0033745895 scopus 로고    scopus 로고
    • Multiple lineages of the non-LTR retrotransposon Rex1 with various success in invading fish genomes
    • Volff, J.-N., Korting C., Schartl M. 2000. Multiple lineages of the non-LTR retrotransposon Rex1 with various success in invading fish genomes. Mol. Biol. Evol. 17: 1673-1684.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 1673-1684
    • Volff, J.-N.1    Korting, C.2    Schartl, M.3
  • 150
    • 0021724698 scopus 로고
    • Dispersal process associated with the L1 family of interspersed repetitive DNA sequences
    • Voliva, C. F., Martin S.L., Hutchison III C.A., Edgell M.H. 1984. Dispersal process associated with the L1 family of interspersed repetitive DNA sequences. Mol J. Biol. 178: 795-813.
    • (1984) Mol J. Biol. , vol.178 , pp. 795-813
    • Voliva, C.F.1    Martin, S.L.2    Hutchison I.I.I, C.A.3    Edgell, M.H.4
  • 151
    • 0024290711 scopus 로고
    • A copia-like transposable element family in Arabidopsis thaliana
    • Voytas, D. F., Ausubel F.M. 1988. A copia-like transposable element family in Arabidopsis thaliana. Nature 336: 242-244.
    • (1988) Nature , vol.336 , pp. 242-244
    • Voytas, D.F.1    Ausubel, F.M.2
  • 152
    • 0026493753 scopus 로고
    • The reverse transcriptase of hepatitis B virus acts as a primer for viral DNA synthesis
    • Wang, G.-H., Seeger C. 1992. The reverse transcriptase of hepatitis B virus acts as a primer for viral DNA synthesis. Cell 71:663-670.
    • (1992) Cell , vol.71 , pp. 663-670
    • Wang, G.-H.1    Seeger, C.2
  • 153
    • 0027141464 scopus 로고
    • The Mauriceville plasmid reverse transcriptase can initiate cDNA synthesis de novo and may be related to reverse transcriptase and DNA polymerase progenitor
    • Wang, H., Lambowitz A.M. 1993. The Mauriceville plasmid reverse transcriptase can initiate cDNA synthesis de novo and may be related to reverse transcriptase and DNA polymerase progenitor. Cell 75:1071-1081.
    • (1993) Cell , vol.75 , pp. 1071-1081
    • Wang, H.1    Lambowitz, A.M.2
  • 154
    • 0033180584 scopus 로고    scopus 로고
    • A reverse-transcriptase/maturase promotes splicing by binding at its own coding segment in a group II intron RNA
    • Wank, H., San Filippo J., Singh R.N., Matsuura M., Lambowitz A.M. 1999. A reverse-transcriptase/maturase promotes splicing by binding at its own coding segment in a group II intron Mol RNA. Cell. 4:239-250.
    • (1999) Mol. Cell. , vol.4 , pp. 239-250
    • Wank, H.1    San Filippo, J.2    Singh, R.N.3    Matsuura, M.4    Lambowitz, A.M.5
  • 156
    • 0022555861 scopus 로고
    • Nonviral retroposons: genes, pseudogenes, transposable elements generated by the reverse flow of genetic information
    • Weiner, A. M., Deininger P.L., Efstratiadis A. 1986. Nonviral retroposons: genes, pseudogenes, transposable elements generated by the reverse flow of genetic information. Annu. Rev. Biochem. 55:631-661.
    • (1986) Annu. Rev. Biochem. , vol.55 , pp. 631-661
    • Weiner, A.M.1    Deininger, P.L.2    Efstratiadis, A.3
  • 157
    • 0031747556 scopus 로고    scopus 로고
    • Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelope-like proteins
    • Wright, D. A., Voytas D.F. 1998. Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelope-like proteins. Genetics 149:703-715.
    • (1998) Genetics , vol.149 , pp. 703-715
    • Wright, D.A.1    Voytas, D.F.2
  • 158
    • 0023691433 scopus 로고
    • Similarity of reverse transcriptase-like sequences of viruses, transposable elements, mitochondrial introns
    • Xiong, Y., Eickbush T.H. 1988. Similarity of reverse transcriptase-like sequences of viruses, transposable elements, mitochondrial introns. Mol. Biol. Evol. 5:675-690.
    • (1988) Mol. Biol. Evol. , vol.5 , pp. 675-690
    • Xiong, Y.1    Eickbush, T.H.2
  • 159
    • 0025006614 scopus 로고
    • Origin and evolution of retroelements based upon their reverse transcriptase sequences
    • Xiong, Y., Eickbush T.H. 1990. Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J. 9:3353-3362.
    • (1990) EMBO J. , vol.9 , pp. 3353-3362
    • Xiong, Y.1    Eickbush, T.H.2
  • 160
    • 0027281011 scopus 로고
    • Pao, a highly divergent retrotransposable element from Bombyx mori containing long terminal repeats with tandem copies of the putative R region
    • Xiong, Y., Burke W.D., Eickbush T.H. 1993. Pao, a highly divergent retrotransposable element from Bombyx mori containing long terminal repeats with tandem copies of the putative R region. Nucleic Acids Res. 21:2117-2123.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2117-2123
    • Xiong, Y.1    Burke, W.D.2    Eickbush, T.H.3
  • 161
    • 0027175076 scopus 로고
    • Dong, a new non-long terminal repeat (non-LTR) retrotransposable element from Bombyx mori
    • Xiong, Y., Eickbush T.H. 1993. Dong, a new non-long terminal repeat (non-LTR) retrotransposable element from Bombyx mori. Nucleic Acids Res. 21:1318.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 1318
    • Xiong, Y.1    Eickbush, T.H.2
  • 162
    • 0031841767 scopus 로고    scopus 로고
    • RNA-induced changes in the activity of the endonuclease encoded by the R2 retro- transposable element
    • Yang, J., Eickbush T.H. 1998. RNA-induced changes in the activity of the endonuclease encoded by the R2 retro- transposable element. Mol. Cell. Biol. 18:3455-3465.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 3455-3465
    • Yang, J.1    Eickbush, T.H.2
  • 163
    • 0033529244 scopus 로고    scopus 로고
    • Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements
    • Yang, J., Malik H.S., Eickbush T.H. 1999. Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements. Proc. Natl. Acad. Sci. USA 96:7847-7852.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 7847-7852
    • Yang, J.1    Malik, H.S.2    Eickbush, T.H.3
  • 164
    • 0032566493 scopus 로고    scopus 로고
    • Group II intron mobility in yeast mitochondria: target DNA-primed reverse transcription activity in aI1 and reverse splicing into DNA transposition sites in vitro
    • Yang, J., Mohr G., Perlman P.S., Lambowitz A.M. 1998. Group II intron mobility in yeast mitochondria: target DNA-primed reverse transcription activity in aI1 and reverse splicing into DNA transposition sites in vitro. Mol J. Biol. 282:505-523.
    • (1998) Mol J. Biol. , vol.282 , pp. 505-523
    • Yang, J.1    Mohr, G.2    Perlman, P.S.3    Lambowitz, A.M.4
  • 165
    • 0029162089 scopus 로고
    • Group II intron mobility occurs by target DNA-primed reverse transcription
    • Zimmerly, S., Guo H., Perlman P.S., Lambowitz A.M. 1995. Group II intron mobility occurs by target DNA-primed reverse transcription. Cell 82:1-10.
    • (1995) Cell , vol.82 , pp. 1-10
    • Zimmerly, S.1    Guo, H.2    Perlman, P.S.3    Lambowitz, A.M.4
  • 166
    • 0028859580 scopus 로고
    • A group II intron RNA is a catalytic component of a DNA endonuclease involved in intron mobility
    • Zimmerly, S., Guo H., Eskes R., Yang J., Perlman P.S., Lambowitz A.M. 1995. A group II intron RNA is a catalytic component of a DNA endonuclease involved in intron mobility. Cell 83:529-538.
    • (1995) Cell , vol.83 , pp. 529-538
    • Zimmerly, S.1    Guo, H.2    Eskes, R.3    Yang, J.4    Perlman, P.S.5    Lambowitz, A.M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.