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Volumn 20, Issue 1, 1998, Pages 43-45

The paleontology of intergene retrotransposons of maize

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; GENE INSERTION; GENE MUTATION; GENETIC VARIABILITY; LONG TERMINAL REPEAT; MAIZE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RETROPOSON; RETROVIRUS;

EID: 0031707062     PISSN: 10614036     EISSN: None     Source Type: Journal    
DOI: 10.1038/1695     Document Type: Article
Times cited : (812)

References (30)
  • 1
    • 0026741959 scopus 로고
    • Ty1-copia group retrotransposons are ubiquitous and heterogeneous in higher plants
    • Flavell, A.J. et al. Ty1-copia group retrotransposons are ubiquitous and heterogeneous in higher plants. Nucleic Acids Res. 20, 3639-3644 (1992).
    • (1992) Nucleic Acids Res. , vol.20 , pp. 3639-3644
    • Flavell, A.J.1
  • 2
    • 0026544795 scopus 로고
    • Retroelements in higher plants
    • Grandbastien, M.A. Retroelements in higher plants. Trends Genet. 8, 103-108 (1992).
    • (1992) Trends Genet. , vol.8 , pp. 103-108
    • Grandbastien, M.A.1
  • 3
    • 0026660056 scopus 로고
    • Copia-like retrotransposons are ubiquitous among plants
    • Voytas, D.F. et al. copia-like retrotransposons are ubiquitous among plants. Proc. Natl Acad. Sci. USA 89, 7124-7128 (1992).
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 7124-7128
    • Voytas, D.F.1
  • 4
    • 0030246842 scopus 로고    scopus 로고
    • The contributions of retroelements to plant genome organization, function and evolution
    • Bennetzen, J.L The contributions of retroelements to plant genome organization, function and evolution. Trends Microbiol. 4, 347-353 (1996).
    • (1996) Trends Microbiol. , vol.4 , pp. 347-353
    • Bennetzen, J.L.1
  • 5
    • 0013630297 scopus 로고    scopus 로고
    • Nested retrotransposons in the intergenic regions of the maize genome
    • SanMiguel, P. et al. Nested retrotransposons in the intergenic regions of the maize genome. Science 274, 765-768 (1996).
    • (1996) Science , vol.274 , pp. 765-768
    • Sanmiguel, P.1
  • 6
    • 0004279283 scopus 로고    scopus 로고
    • Oxford University Press, New York
    • Lewin B. Genes VI. 603-604 (Oxford University Press, New York, 1997).
    • (1997) Genes VI , pp. 603-604
    • Lewin, B.1
  • 7
    • 0029812835 scopus 로고    scopus 로고
    • Substitution rate comparisons between grasses and palms: Synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcl
    • Gaut, B.S., Morton, B.R., McCaig, B.C. & Clegg, M.T. Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcl. Proc. Natl Acad. Sci. USA 93, 10274-10279 (1996).
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 10274-10279
    • Gaut, B.S.1    Morton, B.R.2    McCaig, B.C.3    Clegg, M.T.4
  • 8
    • 0030959648 scopus 로고    scopus 로고
    • DNA sequence evidence for the segmental allotetraploid origin of maize
    • Gaut, B.S. & Doebley, J.F. DNA sequence evidence for the segmental allotetraploid origin of maize. Proc. Natl Acad. Sci. USA 94, 6809-6814 (1997).
    • (1997) Proc. Natl Acad. Sci. USA , vol.94 , pp. 6809-6814
    • Gaut, B.S.1    Doebley, J.F.2
  • 9
    • 6744246225 scopus 로고
    • Exceptionally high levels of restriction site polymorphism in DNA near the maize Adh1 gene
    • Johns, M.A., Strommer, J.N. & Freeling, M. Exceptionally high levels of restriction site polymorphism in DNA near the maize Adh1 gene. Genetics 105, 733-743 (1983).
    • (1983) Genetics , vol.105 , pp. 733-743
    • Johns, M.A.1    Strommer, J.N.2    Freeling, M.3
  • 10
    • 0030482085 scopus 로고    scopus 로고
    • Gene identification in a complex chromosomal continuum by local genomic cross-referencing
    • Avramova, Z. et al. Gene identification in a complex chromosomal continuum by local genomic cross-referencing. Plant J. 10, 1163-1168 (1996).
    • (1996) Plant J. , vol.10 , pp. 1163-1168
    • Avramova, Z.1
  • 11
    • 2642710921 scopus 로고    scopus 로고
    • Recombination occurs uniformly within the bronze gene, a meiotic recombination hotspot in the maize genome
    • Dooner, H.K. & Martinezferez, I.M. Recombination occurs uniformly within the bronze gene, a meiotic recombination hotspot in the maize genome. Plant Cell 9, 1633-1646 (1997).
    • (1997) Plant Cell , vol.9 , pp. 1633-1646
    • Dooner, H.K.1    Martinezferez, I.M.2
  • 12
    • 0027163107 scopus 로고
    • Molecular evolution of the Adh1 locus in the genus Zea
    • Gaut, B.S. & Clegg, M.T. Molecular evolution of the Adh1 locus in the genus Zea. Proc. Natl Acad. Sci. USA. 90, 5095-5099 (1993).
    • (1993) Proc. Natl Acad. Sci. USA. , vol.90 , pp. 5095-5099
    • Gaut, B.S.1    Clegg, M.T.2
  • 13
    • 0025095253 scopus 로고
    • Genetic consequences of packaging two RNA genomes in one retroviral particle: Pseudodiploidy and high rate of genetic recombination
    • Hu, W.S. & Temin, H.M. Genetic consequences of packaging two RNA genomes in one retroviral particle: pseudodiploidy and high rate of genetic recombination. Proc. Natl Acad. Sci. USA 87, 1556-1560 (1990).
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 1556-1560
    • Hu, W.S.1    Temin, H.M.2
  • 14
    • 0028485631 scopus 로고
    • Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA
    • Bennetzen, J.L. et al. Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA. Genome 37, 565-576 (1994).
    • (1994) Genome , vol.37 , pp. 565-576
    • Bennetzen, J.L.1
  • 15
    • 0018185292 scopus 로고
    • Molecular basis of base substitution hotspots in Eicherichia coli
    • Coulondre, C., Miller, J.H., Farabaugh, P.J. & Gilbert, W. Molecular basis of base substitution hotspots in Eicherichia coli. Nature 274, 775-780 (1978).
    • (1978) Nature , vol.274 , pp. 775-780
    • Coulondre, C.1    Miller, J.H.2    Farabaugh, P.J.3    Gilbert, W.4
  • 16
    • 0019417156 scopus 로고
    • Sequence specificity of methylation in higher plant DNA
    • Gruenbaum, Y., Navey-Many, T., Cedar, H. & Razin, A. Sequence specificity of methylation in higher plant DNA. Nature 292, 860-862 (1981).
    • (1981) Nature , vol.292 , pp. 860-862
    • Gruenbaum, Y.1    Navey-Many, T.2    Cedar, H.3    Razin, A.4
  • 17
    • 0004336511 scopus 로고
    • DNA methylation at asymmetric sites is associated with numerous transition mutations
    • Selker, E.U. & Stevens, J.N. DNA methylation at asymmetric sites is associated with numerous transition mutations. Proc. Natl Acad. Sci. USA 82, 8114-8118 (1985).
    • (1985) Proc. Natl Acad. Sci. USA , vol.82 , pp. 8114-8118
    • Selker, E.U.1    Stevens, J.N.2
  • 18
    • 0029998065 scopus 로고    scopus 로고
    • Genetic analysis of genomic methylation patterns in plants and mammals
    • Yoder, J.A. & Bestor, T.H. Genetic analysis of genomic methylation patterns in plants and mammals. Biol. Chem. 377, 605-610 (1996).
    • (1996) Biol. Chem. , vol.377 , pp. 605-610
    • Yoder, J.A.1    Bestor, T.H.2
  • 19
    • 0024712976 scopus 로고
    • Structure and coding properties of Bs1, a maize retrovirus-like transposon
    • Jin, Y.K. & Bennetzen, J.L. Structure and coding properties of Bs1, a maize retrovirus-like transposon. Proc. Natl Acad. Sci. USA 86, 6235-6239 (1989).
    • (1989) Proc. Natl Acad. Sci. USA , vol.86 , pp. 6235-6239
    • Jin, Y.K.1    Bennetzen, J.L.2
  • 20
    • 0028053733 scopus 로고
    • Retrotransposons in the flanking regions of normal plant genes: A role for copia-like elements in the evolution of gene structure and expression
    • White, S.E., Habera, L.F. & Wessler, S.R. Retrotransposons in the flanking regions of normal plant genes: a role for copia-like elements in the evolution of gene structure and expression. Proc. Natl Acad. Sci. USA 91, 11792-11796 (1994).
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 11792-11796
    • White, S.E.1    Habera, L.F.2    Wessler, S.R.3
  • 21
    • 0029808394 scopus 로고    scopus 로고
    • PREM-2, a copia-type retroelement in maize is expressed preferentially in early microspores
    • Turcich, M.P. et al. PREM-2, a copia-type retroelement in maize is expressed preferentially in early microspores. Sex. Plant Reprod. 9, 65-74 (1996).
    • (1996) Sex. Plant Reprod. , vol.9 , pp. 65-74
    • Turcich, M.P.1
  • 22
    • 0029084336 scopus 로고
    • Zeon-1, a member of a new maize retrotransposon family
    • Hu, W., Das, O.P. & Messing, J. Zeon-1, a member of a new maize retrotransposon family. Mol. Gen. Genet. 248, 471-480 (1995).
    • (1995) Mol. Gen. Genet. , vol.248 , pp. 471-480
    • Hu, W.1    Das, O.P.2    Messing, J.3
  • 23
    • 0016351896 scopus 로고
    • Genome size and the proportion of repeated nucleotide sequence DNA in plants
    • Flavell, R.B., Bennett, M.D., Smith, J.B. & Smith, D.B. Genome size and the proportion of repeated nucleotide sequence DNA in plants. Biochemical Genetics 12, 257-269 (1974).
    • (1974) Biochemical Genetics , vol.12 , pp. 257-269
    • Flavell, R.B.1    Bennett, M.D.2    Smith, J.B.3    Smith, D.B.4
  • 24
    • 0021760092 scopus 로고
    • A comprehensive set of sequence analysis programs for the VAX
    • Devereux, J., Haeberli, P. & Smithies, O. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12, 387-395 (1984).
    • (1984) Nucleic Acids Res. , vol.12 , pp. 387-395
    • Devereux, J.1    Haeberli, P.2    Smithies, O.3
  • 25
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16, 111-120 (1980).
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 26
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13, 555-556 (1997).
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1
  • 27
    • 0028294049 scopus 로고
    • MEGA: Molecular evolutionary genetics analysis software for microcomputers
    • Kumar, S., Tamura, K. & Nei, M. MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers. Comput. Appl. Biosci. 10, 189-191 (1994).
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 189-191
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 28
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei, M. & Gojobori, T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3, 418-426 (1986).
    • (1986) Mol. Biol. Evol. , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 29
    • 0028244278 scopus 로고
    • Detecting substitution-rate heterogeneity among regions of a nucleotide sequence
    • Gaut, B.S. & Weir, B.S. Detecting substitution-rate heterogeneity among regions of a nucleotide sequence. Mol. Biol. Evol. 11, 620-629 (1994).
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 620-629
    • Gaut, B.S.1    Weir, B.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.