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Volumn 6, Issue , 2018, Pages 23-46

Bat Biology, Genomes, and the Bat1K Project: To Generate Chromosome-Level Genomes for All Living Bat Species

Author keywords

Echolocation; Ecosystem; Flight; Immunity; Longevity; Mammals

Indexed keywords

ADULT; ARTICLE; BIOLOGY; CHROMOSOME; ECHOLOCATION; ECOSYSTEM; FEMALE; GENETIC VARIABILITY; GENOME; HUMAN; HUMAN EXPERIMENT; IMMUNITY; LONGEVITY; MALE; ORGANIZATION; PHENOTYPE; PUBLICATION; SCIENTIST; WRITING; ADAPTATION; ANIMAL; BAT; EVOLUTION; GENETICS; HIGH THROUGHPUT SEQUENCING; METHODOLOGY; PROCEDURES;

EID: 85042279584     PISSN: 21658102     EISSN: 21658110     Source Type: Journal    
DOI: 10.1146/annurev-animal-022516-022811     Document Type: Article
Times cited : (155)

References (177)
  • 1
    • 0004255074 scopus 로고
    • Cambridge, MA: Harvard Univ. Press
    • Allen GM. 1939. Bats. Cambridge, MA: Harvard Univ. Press
    • (1939) Bats
    • Allen, G.M.1
  • 2
    • 0001489611 scopus 로고
    • What is it like to be a bat
    • Nagel T. 1974. What is it like to be a bat? Philos. Rev. 83(4):435-50
    • (1974) Philos. Rev. , vol.83 , Issue.4 , pp. 435-450
    • Nagel, T.1
  • 4
    • 84866080200 scopus 로고    scopus 로고
    • Phylogenies, fossils and functional genes: The evolution of echolocation in bats
    • Teeling EC, Dool S, Springer MS. 2012. Phylogenies, fossils and functional genes: the evolution of echolocation in bats. See Reference 29, pp. 1-22
    • (2012) See Reference , vol.29 , pp. 1-22
    • Teeling, E.C.1    Dool, S.2    Springer, M.S.3
  • 5
    • 12844251802 scopus 로고    scopus 로고
    • A molecular phylogeny for bats illuminates biogeography and the fossil record
    • Teeling EC, Springer MS, Madsen O, Bates P, O'Brien SJ, Murphy WJ. 2005. A molecular phylogeny for bats illuminates biogeography and the fossil record. Science 307(5709):580-84
    • (2005) Science , vol.307 , Issue.5709 , pp. 580-584
    • Teeling, E.C.1    Springer, M.S.2    Madsen, O.3    Bates, P.4    O'Brien, S.J.5    Murphy, W.J.6
  • 7
    • 84880369066 scopus 로고    scopus 로고
    • The dawn bat, Eonycteris spelaea Dobson (Chiroptera: Pteropodidae) feeds mainly on pollen of economically important food plants in Thailand
    • Bumrungsri S, Lang D, Harrower C, Sripaoraya E, Kitpipit K, et al. 2013. The dawn bat, Eonycteris spelaea Dobson (Chiroptera: Pteropodidae) feeds mainly on pollen of economically important food plants in Thailand. Acta Chiropterologica 15(1):95-104
    • (2013) Acta Chiropterologica , vol.15 , Issue.1 , pp. 95-104
    • Bumrungsri, S.1    Lang, D.2    Harrower, C.3    Sripaoraya, E.4    Kitpipit, K.5
  • 8
    • 85042315061 scopus 로고    scopus 로고
    • Bats and insect pest control: A review
    • Riccucci M, Lanza B. 2014. Bats and insect pest control: a review. Vespertilio 17:161-69
    • (2014) Vespertilio , vol.17 , pp. 161-169
    • Riccucci, M.1    Lanza, B.2
  • 9
    • 84983208420 scopus 로고    scopus 로고
    • Pest control service provided by bats in Mediterranean rice paddies: Linking agroecosystems structure to ecological functions
    • Puig-Montserrat X, Torre I, López-Baucells A, Guerrieri E, Monti MM, et al. 2015. Pest control service provided by bats in Mediterranean rice paddies: linking agroecosystems structure to ecological functions. Mamm. Biol. 80(3):237-45
    • (2015) Mamm. Biol. , vol.80 , Issue.3 , pp. 237-245
    • Puig-Montserrat, X.1    Torre, I.2    López-Baucells, A.3    Guerrieri, E.4    Monti, M.M.5
  • 11
    • 82955200003 scopus 로고    scopus 로고
    • Mass extinctions, biodiversity and mitochondrial function: Are bats "special" as reservoirs for emerging viruses
    • Wang LF, Walker PJ, Poon LL. 2011. Mass extinctions, biodiversity and mitochondrial function: Are bats "special" as reservoirs for emerging viruses? Curr. Opin. Virol. 1(6):649-57
    • (2011) Curr. Opin. Virol. , vol.1 , Issue.6 , pp. 649-657
    • Wang, L.F.1    Walker, P.J.2    Poon, L.L.3
  • 13
    • 84936985324 scopus 로고    scopus 로고
    • Bats as "special" reservoirs for emerging zoonotic pathogens
    • Brook CE,Dobson AP. 2015. Bats as "special" reservoirs for emerging zoonotic pathogens. Curr. Trends Microbiol. 23(3):172-80
    • (2015) Curr. Trends Microbiol. , vol.23 , Issue.3 , pp. 172-180
    • Brook, C.E.1    Dobson, A.P.2
  • 16
  • 17
    • 73249135184 scopus 로고    scopus 로고
    • Methusaleh's zoo: How nature provides us with clues for extending human health span
    • Austad SN. 2010. Methusaleh's zoo: how nature provides us with clues for extending human health span. J. Comp. Pathol. 142:S10-S21
    • (2010) J. Comp. Pathol. , vol.142 , pp. S10-S21
    • Austad, S.N.1
  • 19
    • 0004195869 scopus 로고
    • The avoidance of obstacles by flying bats: Spallanzani's ideas (1794) and later theories
    • Galambos R. 1942. The avoidance of obstacles by flying bats: Spallanzani's ideas (1794) and later theories. Isis 34(2):132-40
    • (1942) Isis , vol.34 , Issue.2 , pp. 132-140
    • Galambos, R.1
  • 21
    • 0004271012 scopus 로고
    • Spallanzani's unpublished experiments on the sensory basis of object perception in bats
    • Dijkgraaf S. 1960. Spallanzani's unpublished experiments on the sensory basis of object perception in bats. Isis 51(1):9-20
    • (1960) Isis , vol.51 , Issue.1 , pp. 9-20
    • Dijkgraaf, S.1
  • 22
    • 0022461702 scopus 로고
    • Flying primates? Megabats have the advanced pathway from eye to midbrain
    • Pettigrew JD. 1986. Flying primates? Megabats have the advanced pathway from eye to midbrain. Science 231(4743):1304-6
    • (1986) Science , vol.231 , Issue.4743 , pp. 1304-1306
    • Pettigrew, J.D.1
  • 23
    • 85042259300 scopus 로고    scopus 로고
    • Phylogeny, genes, and hearing: Implications for the evolution of echolocation in bats
    • ed. MB Fenton, AD Grinnell, AN Popper, RR Fay New York: Springer
    • Teeling EC, Jones G, Rossiter SJ. 2016. Phylogeny, genes, and hearing: implications for the evolution of echolocation in bats. In Bat Bioacoustics ed.MB Fenton, AD Grinnell, AN Popper, RR Fay, pp. 25-54. New York: Springer
    • (2016) Bat Bioacoustics , pp. 25-54
    • Teeling, E.C.1    Jones, G.2    Rossiter, S.J.3
  • 24
    • 85029857671 scopus 로고    scopus 로고
    • Prenatal development supports a single origin of laryngeal echolocation in bats
    • Wang Z, Zhu T, Xue H, Fang N, Zhang J, et al. 2017. Prenatal development supports a single origin of laryngeal echolocation in bats. Nat. Ecol. Evol. 1:0021
    • (2017) Nat. Ecol. Evol. , vol.1 , pp. 0021
    • Wang, Z.1    Zhu, T.2    Xue, H.3    Fang, N.4    Zhang, J.5
  • 25
    • 0035252080 scopus 로고    scopus 로고
    • Molecular phylogenetics and the origins of placental mammals
    • Murphy WJ, Eizirik E, Johnson WE, Zhang YP, Ryder OA, et al. 2001. Molecular phylogenetics and the origins of placental mammals. Nature 409(6820):614-18
    • (2001) Nature , vol.409 , Issue.6820 , pp. 614-618
    • Murphy, W.J.1    Eizirik, E.2    Johnson, W.E.3    Zhang, Y.P.4    Ryder, O.A.5
  • 26
    • 80055070300 scopus 로고    scopus 로고
    • Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification
    • Meredith RW, Janečka JE, Gatesy J, Ryder OA, Fisher CA, et al. 2011. Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification. Science 334(6055):521-24
    • (2011) Science , vol.334 , Issue.6055 , pp. 521-524
    • Meredith, R.W.1    Janečka, J.E.2    Gatesy, J.3    Ryder, O.A.4    Fisher, C.A.5
  • 27
    • 84889090318 scopus 로고    scopus 로고
    • Phylogenomic analyses elucidate the evolutionary relationships of bats
    • Tsagkogeorga G, Parker J, Stupka E, Cotton JA, Rossiter SJ. 2013. Phylogenomic analyses elucidate the evolutionary relationships of bats. Curr. Biol. 23(22):2262-67
    • (2013) Curr. Biol. , vol.23 , Issue.22 , pp. 2262-2267
    • Tsagkogeorga, G.1    Parker, J.2    Stupka, E.3    Cotton, J.A.4    Rossiter, S.J.5
  • 28
    • 70349838568 scopus 로고    scopus 로고
    • Global completeness of the bat fossil record
    • Eiting TP,Gunnell GF. 2009. Global completeness of the bat fossil record. J. Mamm. Evol. 16(3):151-73
    • (2009) J. Mamm. Evol. , vol.16 , Issue.3 , pp. 151-173
    • Eiting, T.P.1    Gunnell, G.F.2
  • 30
    • 67049100269 scopus 로고    scopus 로고
    • The evolution of color vision in nocturnal mammals
    • Zhao H, Rossiter SJ, Teeling EC, Li C, Cotton JA, et al. 2009. The evolution of color vision in nocturnal mammals. PNAS 106(22):8980-85
    • (2009) PNAS , vol.106 , Issue.22 , pp. 8980-8985
    • Zhao, H.1    Rossiter, S.J.2    Teeling, E.C.3    Li, C.4    Cotton, J.A.5
  • 31
    • 74949117308 scopus 로고    scopus 로고
    • Ecological adaptation determines functional mammalian olfactory subgenomes
    • Hayden S, BekaertM,CriderTA, Mariani S,MurphyWJ, et al. 2010. Ecological adaptation determines functional mammalian olfactory subgenomes. Genome Res. 20(1):1-9
    • (2010) Genome Res. , vol.20 , Issue.1 , pp. 1-9
    • Hayden, S.1    Bekaert, M.2    Crider, T.A.3    Mariani, S.4    Murphy, W.J.5
  • 32
    • 84874376138 scopus 로고    scopus 로고
    • Genomic diversity and evolution of the head crest in the rock pigeon
    • Shapiro MD, Kronenberg Z, Li C, Domyan ET, Pan H, et al. 2013. Genomic diversity and evolution of the head crest in the rock pigeon. Science 339(6123):1063-67
    • (2013) Science , vol.339 , Issue.6123 , pp. 1063-1067
    • Shapiro, M.D.1    Kronenberg, Z.2    Li, C.3    Domyan, E.T.4    Pan, H.5
  • 33
    • 84959058509 scopus 로고    scopus 로고
    • Perspectives from the avian phylogenomics project: Questions that can be answered with sequencing all genomes of a vertebrate class
    • Jarvis ED. 2016. Perspectives from the avian phylogenomics project: questions that can be answered with sequencing all genomes of a vertebrate class. Annu. Rev. Anim. Biosci. 4:45-59
    • (2016) Annu. Rev. Anim. Biosci. , vol.4 , pp. 45-59
    • Jarvis, E.D.1
  • 34
    • 33644660937 scopus 로고    scopus 로고
    • Natural selection and mammalian BRCA1 sequences: Elucidating functionally important sites relevant to breast cancer susceptibility in humans Mamm
    • Burk-Herrick A, Scally M, Amrine-Madsen H, Stanhope MJ, Springer MS. 2006 Natural selection and mammalian BRCA1 sequences: elucidating functionally important sites relevant to breast cancer susceptibility in humans. Mamm. Genome 17(3):257-70
    • (2006) Genome , vol.17 , Issue.3 , pp. 257-270
    • Burk-Herrick, A.1    Scally, M.2    Amrine-Madsen, H.3    Stanhope, M.J.4    Springer, M.S.5
  • 35
    • 71049176982 scopus 로고    scopus 로고
    • Genome 10K: A proposal to obtain whole-genome sequence for 10,000 vertebrate species
    • Haussler D, O'Brien SJ, Ryder OA, Barker FK, ClampM, et al. 2009 Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species. J. Hered. 100(6):659-74
    • (2009) J. Hered. , vol.100 , Issue.6 , pp. 659-674
    • Haussler, D.1    O'Brien, S.J.2    Ryder, O.A.3    Barker, F.K.4    Clamp, M.5
  • 36
    • 84912002247 scopus 로고    scopus 로고
    • The scientific quest for lasting youth: Prospects for curing aging
    • De Magalhaes JP. 2014. The scientific quest for lasting youth: prospects for curing aging. Rejuvenation Res. 17(5):458-67
    • (2014) Rejuvenation Res. , vol.17 , Issue.5 , pp. 458-467
    • De Magalhaes, J.P.1
  • 37
    • 84884742016 scopus 로고    scopus 로고
    • Emerging infectious diseases: Threats to human health and global stability
    • Morens DM, Fauci AS. 2013. Emerging infectious diseases: threats to human health and global stability. PLOS Pathog. 9(7):p.e1003467
    • (2013) PLOS Pathog. , vol.9 , Issue.7 , pp. e1003467
    • Morens, D.M.1    Fauci, A.S.2
  • 39
    • 50949097110 scopus 로고    scopus 로고
    • Comparative and alternative approaches and novel animal models for aging research
    • Holmes DJ, Kristan DM. 2008. Comparative and alternative approaches and novel animal models for aging research. Age 30(2-3):63-73
    • (2008) Age , vol.30 , Issue.2-3 , pp. 63-73
    • Holmes, D.J.1    Kristan, D.M.2
  • 40
    • 72149131462 scopus 로고    scopus 로고
    • Bats and birds: Exceptional longevity despite high metabolic rates
    • Munshi-South J, Wilkinson GS. 2010. Bats and birds: exceptional longevity despite high metabolic rates. Ageing Res. Rev. 9(1):12-19
    • (2010) Ageing Res. Rev. , vol.9 , Issue.1 , pp. 12-19
    • Munshi-South, J.1    Wilkinson, G.S.2
  • 41
    • 0026012740 scopus 로고
    • Mammalian aging, metabolism, and ecology: Evidence from the bats and marsupials
    • Austad SN, Fischer KE. 1991. Mammalian aging, metabolism, and ecology: evidence from the bats and marsupials. J. Gerontol. 46(2):B47-B53
    • (1991) J. Gerontol. , vol.46 , Issue.2 , pp. B47-B53
    • Austad, S.N.1    Fischer, K.E.2
  • 42
    • 0000055057 scopus 로고
    • Pleiotropy, natural selection, and the evolution of senescence
    • Williams G. 1957. Pleiotropy, natural selection, and the evolution of senescence. Evolution 11:398-411
    • (1957) Evolution , vol.11 , pp. 398-411
    • Williams, G.1
  • 44
    • 84955216871 scopus 로고    scopus 로고
    • A nonlethal sampling method to obtain, generate and assemble whole blood transcriptomes from small, wild mammals
    • Huang Z, Gallot A, Lao NT, Puechmaille SJ, Foley NM, et al. 2016. A nonlethal sampling method to obtain, generate and assemble whole blood transcriptomes from small, wild mammals. Mol. Ecol. Resour. 16(1):150-62
    • (2016) Mol. Ecol. Resour. , vol.16 , Issue.1 , pp. 150-162
    • Huang, Z.1    Gallot, A.2    Lao, N.T.3    Puechmaille, S.J.4    Foley, N.M.5
  • 45
    • 84995877131 scopus 로고    scopus 로고
    • Blood miRNomes and transcriptomes reveal novel longevity mechanisms in the long-lived bat, Myotis myotis
    • Huang Z, Jebb D, Teeling EC. 2016. Blood miRNomes and transcriptomes reveal novel longevity mechanisms in the long-lived bat, Myotis myotis. BMC Genom. 17(1):906
    • (2016) BMC Genom. , vol.17 , Issue.1 , pp. 906
    • Huang, Z.1    Jebb, D.2    Teeling, E.C.3
  • 46
    • 84863329778 scopus 로고    scopus 로고
    • Inflammaging: Disturbed interplay between autophagy and inflammasomes
    • Salminen A, Kaarniranta K, Kauppinen A. 2012. Inflammaging: disturbed interplay between autophagy and inflammasomes. Aging 4(3):166-75
    • (2012) Aging , vol.4 , Issue.3 , pp. 166-175
    • Salminen, A.1    Kaarniranta, K.2    Kauppinen, A.3
  • 47
    • 84872783004 scopus 로고    scopus 로고
    • Comparative analysis of bat genomes provides insight into the evolution of flight and immunity
    • ZhangG,CowledC, Shi Z, Huang Z, Bishop-Lilly KA, et al. 2013. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Science 339(6118):456-60
    • (2013) Science , vol.339 , Issue.6118 , pp. 456-460
    • Zhang, G.1    Cowled, C.2    Shi, Z.3    Huang, Z.4    Bishop-Lilly, K.A.5
  • 48
    • 84900988267 scopus 로고    scopus 로고
    • Chronic inflammation (inflammaging) and its potential contribution to age-associated diseases
    • Franceschi C, Campisi J. 2014. Chronic inflammation (inflammaging) and its potential contribution to age-associated diseases. J. Gerontol. A Biol. Sci. Med. Sci. 69(Suppl. 1):S4-S9
    • (2014) J. Gerontol. A Biol. Sci. Med. Sci. , vol.69 , pp. S4-S9
    • Franceschi, C.1    Campisi, J.2
  • 50
    • 84926308857 scopus 로고    scopus 로고
    • White-nose syndrome fungus introduced from Europe to North America
    • Leopardi S, Blake D, Puechmaille SJ. 2015. White-nose syndrome fungus introduced from Europe to North America. Curr. Biol. 25(6):R217-R219
    • (2015) Curr. Biol. , vol.25 , Issue.6 , pp. R217-R219
    • Leopardi, S.1    Blake, D.2    Puechmaille, S.J.3
  • 51
    • 77955298045 scopus 로고    scopus 로고
    • An emerging disease causes regional population collapse of a common North American bat species
    • Frick WF, Pollock JF, Hicks AC, Langwig KE, Reynolds DS, et al. 2010. An emerging disease causes regional population collapse of a common North American bat species. Science 329(5992):679-82
    • (2010) Science , vol.329 , Issue.5992 , pp. 679-682
    • Frick, W.F.1    Pollock, J.F.2    Hicks, A.C.3    Langwig, K.E.4    Reynolds, D.S.5
  • 52
    • 79955691716 scopus 로고    scopus 로고
    • Pan-European distribution of white-nose syndrome fungus (Geomyces destructans) not associated with mass mortality
    • Puechmaille SJ, Wibbelt G, Korn V, Fuller H, Forget F, et al. 2011b. Pan-European distribution of white-nose syndrome fungus (Geomyces destructans) not associated with mass mortality. PLOS ONE 6(4):e19167
    • (2011) PLOS ONE , vol.6 , Issue.4 , pp. e19167
    • Puechmaille, S.J.1    Wibbelt, G.2    Korn, V.3    Fuller, H.4    Forget, F.5
  • 53
    • 85019158568 scopus 로고    scopus 로고
    • Further evidence for bats as the evolutionary source of Middle East respiratory syndrome coronavirus
    • Anthony SJ, Gilardi K, Menachery VD, Goldstein T, Ssebide B, et al. 2017. Further evidence for bats as the evolutionary source of Middle East respiratory syndrome coronavirus. mBio 8(2):e00373-17
    • (2017) MBio , vol.8 , Issue.2 , pp. e00373-e00417
    • Anthony, S.J.1    Gilardi, K.2    Menachery, V.D.3    Goldstein, T.4    Ssebide, B.5
  • 55
    • 84949623850 scopus 로고    scopus 로고
    • A SARS-like cluster of circulating bat coronaviruses shows potential for human emergence
    • Menachery VD, Yount BL Jr., Debbink K, Agnihothram S, Gralinski LE, et al. 2015. A SARS-like cluster of circulating bat coronaviruses shows potential for human emergence. Nat. Med. 21:1508-13
    • (2015) Nat. Med. , vol.21 , pp. 1508-1513
    • Menachery, V.D.1    Yount, B.L.2    Debbink, K.3    Agnihothram, S.4    Gralinski, L.E.5
  • 58
    • 84943602497 scopus 로고    scopus 로고
    • Bats initiate vital agroecological interactions in corn
    • Maine JJ, Boyles JG. 2015. Bats initiate vital agroecological interactions in corn. PNAS 112(40):12438-43
    • (2015) PNAS , vol.112 , Issue.40 , pp. 12438-12443
    • Maine, J.J.1    Boyles, J.G.2
  • 60
    • 84931748956 scopus 로고    scopus 로고
    • Bats and birds increase crop yield in tropical agroforestry landscapes
    • Maas B, Clough Y, Tscharntke T. 2013. Bats and birds increase crop yield in tropical agroforestry landscapes. Ecol. Lett. 16(12):1480-87
    • (2013) Ecol. Lett. , vol.16 , Issue.12 , pp. 1480-1487
    • Maas, B.1    Clough, Y.2    Tscharntke, T.3
  • 61
    • 85016638772 scopus 로고    scopus 로고
    • Can we protect island flying foxes
    • VincenotCE, FlorensFV, Kingston T. 2017. Can we protect island flying foxes? Science 355(6332):1368-70
    • (2017) Science , vol.355 , Issue.6332 , pp. 1368-1370
    • Vincenot, C.E.1    Florens, F.V.2    Kingston, T.3
  • 62
    • 78049285239 scopus 로고    scopus 로고
    • Cetaceans on a molecular fast track to ultrasonic hearing
    • Liu Y, Rossiter SJ, Han X, Cotton JA, Zhang S. 2010. Cetaceans on a molecular fast track to ultrasonic hearing. Curr. Biol. 20(20):1834-39
    • (2010) Curr. Biol. , vol.20 , Issue.20 , pp. 1834-1839
    • Liu, Y.1    Rossiter, S.J.2    Han, X.3    Cotton, J.A.4    Zhang, S.5
  • 63
    • 74549224446 scopus 로고    scopus 로고
    • Convergent sequence evolution between echolocating bats and dolphins
    • Liu Y, Cotton JA, Shen B, Han X, Rossiter SJ, et al. 2010. Convergent sequence evolution between echolocating bats and dolphins. Curr. Biol. 20(2):R53-R54
    • (2010) Curr. Biol. , vol.20 , Issue.2 , pp. R53-R54
    • Liu, Y.1    Cotton, J.A.2    Shen, B.3    Han, X.4    Rossiter, S.J.5
  • 64
    • 74549195621 scopus 로고    scopus 로고
    • The hearing gene Prestin unites echolocating bats and whales
    • Li Y, Liu Z, Shi P, Zhang J. 2010. The hearing gene Prestin unites echolocating bats and whales. Curr. Biol. 20(2):R55-R56
    • (2010) Curr. Biol. , vol.20 , Issue.2 , pp. R55-R56
    • Li, Y.1    Liu, Z.2    Shi, P.3    Zhang, J.4
  • 65
    • 84885574505 scopus 로고    scopus 로고
    • Genome-wide signatures of convergent evolution in echolocating mammals
    • Parker J, Tsagkogeorga G, Cotton JA, Liu Y, Provero P, et al. 2013. Genome-wide signatures of convergent evolution in echolocating mammals. Nature 502(7470):228-31
    • (2013) Nature , vol.502 , Issue.7470 , pp. 228-231
    • Parker, J.1    Tsagkogeorga, G.2    Cotton, J.A.3    Liu, Y.4    Provero, P.5
  • 67
    • 85042325139 scopus 로고    scopus 로고
    • The birth and death of olfaction: The role of olfactory receptor evolution in mammalian niche specialization
    • Manuscript in review
    • Hughes GM, Boston EM, Finarelli JA, Murphy WJ, Higgins DG, et al. 2017. The birth and death of olfaction: the role of olfactory receptor evolution in mammalian niche specialization. Mol. Biol. Evol. Manuscript in review
    • (2017) Mol. Biol. Evol.
    • Hughes, G.M.1    Boston, E.M.2    Finarelli, J.A.3    Murphy, W.J.4    Higgins, D.G.5
  • 68
    • 78650426649 scopus 로고    scopus 로고
    • Widespread losses of vomeronasal signal transduction in bats
    • Zhao H, Xu D, Zhang S, Zhang J. 2010. Widespread losses of vomeronasal signal transduction in bats. Mol. Biol. Evol. 28(1):7-12
    • (2010) Mol. Biol. Evol. , vol.28 , Issue.1 , pp. 7-12
    • Zhao, H.1    Xu, D.2    Zhang, S.3    Zhang, J.4
  • 69
    • 84908273415 scopus 로고    scopus 로고
    • Themolecular biology of vertebrate olfaction
    • Hayden S, Teeling EC. 2014. Themolecular biology of vertebrate olfaction. Anat. Rec. 297(11):2216-26
    • (2014) Anat. Rec. , vol.297 , Issue.11 , pp. 2216-2226
    • Hayden, S.1    Teeling, E.C.2
  • 70
    • 85014721439 scopus 로고    scopus 로고
    • Trpc2 pseudogenization dynamics in bats reveal ancestral vomeronasal signaling, then pervasive loss
    • Yohe LR, Abubakar R,GiordanoC,Dumont E, Sears KE, et al. 2017. Trpc2 pseudogenization dynamics in bats reveal ancestral vomeronasal signaling, then pervasive loss. Evolution 71(4):923-35
    • (2017) Evolution , vol.71 , Issue.4 , pp. 923-935
    • Yohe, L.R.1    Abubakar, R.2    Giordano, C.3    Dumont, E.4    Sears, K.E.5
  • 71
    • 84875682200 scopus 로고    scopus 로고
    • A phylomedicine approach to understanding the evolution of auditory sensory perception and disease in mammals
    • Kirwan JD, Bekaert M, Commins JM, Davies KT, Rossiter SJ, et al. 2013. A phylomedicine approach to understanding the evolution of auditory sensory perception and disease in mammals. Evol. Appl. 6(3):412-22
    • (2013) Evol. Appl. , vol.6 , Issue.3 , pp. 412-422
    • Kirwan, J.D.1    Bekaert, M.2    Commins, J.M.3    Davies, K.T.4    Rossiter, S.J.5
  • 72
    • 84873046924 scopus 로고    scopus 로고
    • Evolutionary origins of ultrasonic hearing and laryngeal echolocation in bats inferred from morphological analyses of the inner ear
    • Davies KT, Maryanto I, Rossiter SJ. 2013. Evolutionary origins of ultrasonic hearing and laryngeal echolocation in bats inferred from morphological analyses of the inner ear. Front. Zool. 10(1):2
    • (2013) Front. Zool. , vol.10 , Issue.1 , pp. 2
    • Davies, K.T.1    Maryanto, I.2    Rossiter, S.J.3
  • 73
    • 70350619337 scopus 로고    scopus 로고
    • Promises and challenges of genetic therapy for blindness
    • Cremers FP, Collin RW. 2009. Promises and challenges of genetic therapy for blindness. Lancet 374(9701):1569-70
    • (2009) Lancet , vol.374 , Issue.9701 , pp. 1569-1570
    • Cremers, F.P.1    Collin, R.W.2
  • 74
    • 73549109925 scopus 로고    scopus 로고
    • World Health Organ. Fact Sheet 282, World Health Organ. , Geneva
    • World Health Organ. 2014. Visual impairment and blindness. Fact Sheet 282, World Health Organ., Geneva. http://www.who.int/mediacentre/factsheets/fs282/en
    • (2014) Visual Impairment and Blindness
  • 75
    • 67650235552 scopus 로고    scopus 로고
    • World Health Organ. Fact Sheet, World Health Organ. , Geneva
    • World Health Organ. 2017. Deafness and hearing loss. Fact Sheet, World Health Organ., Geneva. http://www.who.int/mediacentre/factsheets/fs300/en
    • (2017) Deafness and Hearing Loss
  • 76
    • 2942564425 scopus 로고    scopus 로고
    • Harmonic-hopping in Wallacea's bats
    • Kingston T, Rossiter SJ. 2004. Harmonic-hopping in Wallacea's bats. Nature 429(6992):654-57
    • (2004) Nature , vol.429 , Issue.6992 , pp. 654-657
    • Kingston, T.1    Rossiter, S.J.2
  • 77
    • 84455194198 scopus 로고    scopus 로고
    • The evolution of sensory divergence in the context of limited gene flow in the bumblebee bat
    • Puechmaille SJ, Gouilh MA, Piyapan P, Yokubol M, Mie KM, et al. 2011. The evolution of sensory divergence in the context of limited gene flow in the bumblebee bat. Nat. Commun. 2:573
    • (2011) Nat. Commun. , vol.2 , pp. 573
    • Puechmaille, S.J.1    Gouilh, M.A.2    Piyapan, P.3    Yokubol, M.4    Mie, K.M.5
  • 78
    • 84904985516 scopus 로고    scopus 로고
    • Female mate choice can drive the evolution of high frequency echolocation in bats: A case study with Rhinolophus mehelyi
    • Puechmaille SJ, Borissov IM, Zsebok S, Allegrini B, Hizem M, et al. 2014. Female mate choice can drive the evolution of high frequency echolocation in bats: a case study with Rhinolophus mehelyi. PLOS ONE 9(7):e103452
    • (2014) PLOS ONE , vol.9 , Issue.7 , pp. e103452
    • Puechmaille, S.J.1    Borissov, I.M.2    Zsebok, S.3    Allegrini, B.4    Hizem, M.5
  • 80
    • 0033005856 scopus 로고    scopus 로고
    • Birdsong and human speech: Common themes and mechanisms
    • Doupe AJ, Kuhl PK. 1999. Birdsong and human speech: common themes and mechanisms. Annu. Rev. Neurosci. 22(1):567-631
    • (1999) Annu. Rev. Neurosci. , vol.22 , Issue.1 , pp. 567-631
    • Doupe, A.J.1    Kuhl, P.K.2
  • 81
    • 84869219473 scopus 로고    scopus 로고
    • Birds, primates, and spoken language origins: Behavioral phenotypes and neurobiological substrates
    • Petkov CI, Jarvis E. 2012. Birds, primates, and spoken language origins: behavioral phenotypes and neurobiological substrates. Front. Evol. Neurosci. 4:12
    • (2012) Front. Evol. Neurosci. , vol.4 , pp. 12
    • Petkov, C.I.1    Jarvis, E.2
  • 82
    • 84904537051 scopus 로고    scopus 로고
    • Vocal production learning in bats
    • Knornschild M. 2014. Vocal production learning in bats. Curr. Opin. Neurobiol. 28:80-85
    • (2014) Curr. Opin. Neurobiol. , vol.28 , pp. 80-85
    • Knornschild, M.1
  • 83
    • 84917671664 scopus 로고    scopus 로고
    • Convergent transcriptional specializations in the brains of humans and song-learning birds
    • Pfenning AR, Hara E, Whitney O, Rivas MV, Wang R, et al. 2014. Convergent transcriptional specializations in the brains of humans and song-learning birds. Science 346(6215):1256846
    • (2014) Science , vol.346 , Issue.6215 , pp. 1256846
    • Pfenning, A.R.1    Hara, E.2    Whitney, O.3    Rivas, M.V.4    Wang, R.5
  • 84
    • 84996483790 scopus 로고    scopus 로고
    • Conserved syntenic clusters of protein coding genes are missing in birds
    • Lovell PV, Wirthlin M, Wilhelm L, Minx P, Lazar NH, et al. 2014. Conserved syntenic clusters of protein coding genes are missing in birds. Genome Biol. 15(12):565
    • (2014) Genome Biol. , vol.15 , Issue.12 , pp. 565
    • Lovell, P.V.1    Wirthlin, M.2    Wilhelm, L.3    Minx, P.4    Lazar, N.H.5
  • 85
    • 84917710714 scopus 로고    scopus 로고
    • Core and region-enriched networks of behaviorally regulated genes and the singing genome
    • WhitneyO, Pfenning AR,Howard JT, Blatti CA, Liu F, et al. 2014. Core and region-enriched networks of behaviorally regulated genes and the singing genome. Science 346(6215):1256780
    • (2014) Science , vol.346 , Issue.6215 , pp. 1256780
    • Whitney, O.1    Pfenning, A.R.2    Howard, J.T.3    Blatti, C.A.4    Liu, F.5
  • 86
    • 84976512949 scopus 로고    scopus 로고
    • What bats have to say about speech and language
    • Vernes SC. 2017. What bats have to say about speech and language. Psychon. Bull. Rev. 24:111-17
    • (2017) Psychon. Bull. Rev. , vol.24 , pp. 111-117
    • Vernes, S.C.1
  • 87
    • 0142097065 scopus 로고    scopus 로고
    • Prevalence and natural history of primary speech and language delay: Findings from a systematic review of the literature
    • Law J, Boyle J, Harris F, Harkness A, Nye C. 2000. Prevalence and natural history of primary speech and language delay: findings from a systematic review of the literature. Int. J. Lang. Commun. Disord. 35:165-88
    • (2000) Int. J. Lang. Commun. Disord. , vol.35 , pp. 165-188
    • Law, J.1    Boyle, J.2    Harris, F.3    Harkness, A.4    Nye, C.5
  • 88
    • 84962355549 scopus 로고    scopus 로고
    • Bat accelerated regions identify a bat forelimb specific enhancer in the HoxD locus
    • Booker BM, Friedrich T, Mason MK, VanderMeer JE, Zhao J, et al. 2016. Bat accelerated regions identify a bat forelimb specific enhancer in the HoxD locus. PLOS Genet. 12(3):e1005738
    • (2016) PLOS Genet. , vol.12 , Issue.3 , pp. e1005738
    • Booker, B.M.1    Friedrich, T.2    Mason, M.K.3    VanderMeer, J.E.4    Zhao, J.5
  • 89
    • 84976407367 scopus 로고    scopus 로고
    • Use of a conditional Ubr5 mutant allele to investigate the role of an N-end rule ubiquitin-protein ligase in hedgehog signalling and embryonic limb development
    • Kinsella E, Dora N, Mellis D, Lettice L, Deveney P, et al. 2016. Use of a conditional Ubr5 mutant allele to investigate the role of an N-end rule ubiquitin-protein ligase in hedgehog signalling and embryonic limb development. PLOS ONE 11(6):e0157079
    • (2016) PLOS ONE , vol.11 , Issue.6 , pp. e0157079
    • Kinsella, E.1    Dora, N.2    Mellis, D.3    Lettice, L.4    Deveney, P.5
  • 90
    • 84961922811 scopus 로고    scopus 로고
    • Transcriptomic and epigenomic characterization of the developing bat wing
    • Eckalbar WL, Schlebusch SA, Mason MK, Gill Z, Parker AV, et al. 2016. Transcriptomic and epigenomic characterization of the developing bat wing. Nat. Genet. 48(5):528
    • (2016) Nat. Genet. , vol.48 , Issue.5 , pp. 528
    • Eckalbar, W.L.1    Schlebusch, S.A.2    Mason, M.K.3    Gill, Z.4    Parker, A.V.5
  • 91
    • 85013393921 scopus 로고    scopus 로고
    • Dynamics of genome size evolution in birds and mammals
    • Kapusta A, Suh A, Feschotte C. 2017. Dynamics of genome size evolution in birds and mammals. PNAS 114(8):E1460-E69
    • (2017) PNAS , vol.114 , Issue.8 , pp. E1460-E1469
    • Kapusta, A.1    Suh, A.2    Feschotte, C.3
  • 92
    • 85007360555 scopus 로고    scopus 로고
    • Evolution of bird genomes-A transposon's-eye view
    • Kapusta A, Suh A. 2017. Evolution of bird genomes-A transposon's-eye view. Ann. N. Y. Acad. Sci. 1389(1):164-85
    • (2017) Ann. N. Y. Acad. Sci. , vol.1389 , Issue.1 , pp. 164-185
    • Kapusta, A.1    Suh, A.2
  • 93
    • 0029100668 scopus 로고
    • Small genomes for better flyers
    • Hughes AL, Hughes MK. 1995. Small genomes for better flyers. Nature 377(6548):391
    • (1995) Nature , vol.377 , Issue.6548 , pp. 391
    • Hughes, A.L.1    Hughes, M.K.2
  • 94
    • 43149103661 scopus 로고    scopus 로고
    • Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus
    • Ray DA, Feschotte C, Pagan HJ, Smith JD, Pritham EJ, et al. 2008. Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus. Genome Res. 18:717-28
    • (2008) Genome Res. , vol.18 , pp. 717-728
    • Ray, D.A.1    Feschotte, C.2    Pagan, H.J.3    Smith, J.D.4    Pritham, E.J.5
  • 95
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al. 2001. Initial sequencing and analysis of the human genome. Nature 409(6822):860-921
    • (2001) Nature , vol.409 , Issue.6822 , pp. 860-921
    • Lander, E.S.1    Linton, L.M.2    Birren, B.3    Nusbaum, C.4    Zody, M.C.5
  • 96
    • 24044455869 scopus 로고    scopus 로고
    • Genome sequencing in microfabricated high-density picolitre reactors
    • Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, et al. 2005. Genome sequencing in microfabricated high-density picolitre reactors. Nature 437(7057):376-80
    • (2005) Nature , vol.437 , Issue.7057 , pp. 376-380
    • Margulies, M.1    Egholm, M.2    Altman, W.E.3    Attiya, S.4    Bader, J.S.5
  • 97
    • 80051688000 scopus 로고    scopus 로고
    • Field guide to next-generation DNA sequencers
    • Glenn TC. 2011. Field guide to next-generation DNA sequencers. Mol. Ecol. Resour. 11(5):759-69
    • (2011) Mol. Ecol. Resour. , vol.11 , Issue.5 , pp. 759-769
    • Glenn, T.C.1
  • 98
    • 85007236842 scopus 로고    scopus 로고
    • Monitoring error rates in Illumina sequencing
    • Manley LJ, Ma D, Levine SS. 2016. Monitoring error rates in Illumina sequencing. J. Biomol. Tech. 27(4):125-28
    • (2016) J. Biomol. Tech. , vol.27 , Issue.4 , pp. 125-128
    • Manley, L.J.1    Ma, D.2    Levine, S.S.3
  • 100
    • 84957436423 scopus 로고    scopus 로고
    • The sequence of sequencers: The history of sequencing DNA
    • Heather JM, Chain B. 2016. The sequence of sequencers: the history of sequencing DNA. Genomics 107(1):1-8
    • (2016) Genomics , vol.107 , Issue.1 , pp. 1-8
    • Heather, J.M.1    Chain, B.2
  • 101
    • 84947299022 scopus 로고    scopus 로고
    • PacBio sequencing and its application
    • Rhoads A, Au KF. 2015. PacBio sequencing and its application. Genom. Proteom. Bioinforma. 13(5):278-89
    • (2015) Genom. Proteom. Bioinforma. , vol.13 , Issue.5 , pp. 278-289
    • Rhoads, A.1    Au, K.F.2
  • 103
    • 84977101027 scopus 로고    scopus 로고
    • Long-read sequencing and de novo assembly of a Chinese genome
    • Shi L, Guo Y,Dong C,Huddleston J, YangH, et al. 2016. Long-read sequencing and de novo assembly of a Chinese genome. Nat. Commun. 7:12065
    • (2016) Nat. Commun. , vol.7 , pp. 12065
    • Shi, L.1    Guo, Y.2    Dong, C.3    Huddleston, J.4    Yang, H.5
  • 104
    • 85019066712 scopus 로고    scopus 로고
    • Canu: Scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
    • Koren S, Walenz BP, Berlin K, Miller JR, Bergman NH, Phillippy AM. 2017. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation. Genome Res. 27:722-36
    • (2017) Genome Res. , vol.27 , pp. 722-736
    • Koren, S.1    Walenz, B.P.2    Berlin, K.3    Miller, J.R.4    Bergman, N.H.5    Phillippy, A.M.6
  • 105
    • 84913539196 scopus 로고    scopus 로고
    • LoRDEC: Accurate and efficient long read error correction
    • Salmela L, Rivals E. 2014. LoRDEC: accurate and efficient long read error correction. Bioinformatics 30(24):3506-14
    • (2014) Bioinformatics , vol.30 , Issue.24 , pp. 3506-3514
    • Salmela, L.1    Rivals, E.2
  • 106
    • 84884398663 scopus 로고    scopus 로고
    • Cerulean: A hybrid assembly using high throughput short and long reads
    • ed. A Darling, J Stoye Berlin: Springer
    • Deshpande V, Fung EDK, Pham S, Bafna V. 2013. Cerulean: a hybrid assembly using high throughput short and long reads. In Algorithms in Bioinformatics, Vol. 8126, ed. A Darling, J Stoye, pp. 349-63. Berlin: Springer
    • (2013) Algorithms in Bioinformatics , vol.8126 , pp. 349-363
    • Deshpande, V.1    Fung, E.D.K.2    Pham, S.3    Bafna, V.4
  • 108
    • 80054973803 scopus 로고    scopus 로고
    • A high-resolution map of human evolutionary constraint using 29 mammals
    • Lindblad-Toh K, Garber M, Zuk O, Lin MF, Parker BJ, et al. 2011. A high-resolution map of human evolutionary constraint using 29 mammals. Nature 478(7370):476-82
    • (2011) Nature , vol.478 , Issue.7370 , pp. 476-482
    • Lindblad-Toh, K.1    Garber, M.2    Zuk, O.3    Lin, M.F.4    Parker, B.J.5
  • 109
    • 33845965438 scopus 로고    scopus 로고
    • Order Chiroptera
    • ed. DE Wilson, DM Reeder Baltimore, MD: Johns Hopkins Univ. Press. 3rd ed
    • Simmons NB. 2005. Order Chiroptera. In Mammal Species of the World: A Taxonomic and Geographic Reference, ed. DE Wilson, DM Reeder, pp. 312-529. Baltimore, MD: Johns Hopkins Univ. Press. 3rd ed.
    • (2005) Mammal Species of the World: A Taxonomic and Geographic Reference , pp. 312-529
    • Simmons, N.B.1
  • 112
    • 0242456924 scopus 로고    scopus 로고
    • MtDNA perspective of chromosomal diversification and hybridization in Peters' tent-making bat (Uroderma bilobatum: Phyllostomidae)
    • Hoffmann FG, Owen JG, Baker RJ. 2003. mtDNA perspective of chromosomal diversification and hybridization in Peters' tent-making bat (Uroderma bilobatum: Phyllostomidae). Mol. Ecol. 12(11):2981-93
    • (2003) Mol. Ecol. , vol.12 , Issue.11 , pp. 2981-2993
    • Hoffmann, F.G.1    Owen, J.G.2    Baker, R.J.3
  • 113
    • 85012995046 scopus 로고    scopus 로고
    • Investigating hybridization between the two sibling bat species Myotis myotis and M blythii from guano in a natural mixed maternity colony
    • Afonso E, Goydadin A-C, Giraudoux P, Farny G. 2017. Investigating hybridization between the two sibling bat species Myotis myotis and M. blythii from guano in a natural mixed maternity colony. PLOS ONE 12(2):e0170534
    • (2017) PLOS ONE , vol.12 , Issue.2 , pp. e0170534
    • Afonso, E.1    Goydadin, A.-C.2    Giraudoux, P.3    Farny, G.4
  • 114
    • 78650882974 scopus 로고    scopus 로고
    • Morphological evidence for hybridization in the sister species Myotis myotis and Myotis oxygnathus (Chiroptera: Vespertilionidae) in the Carpathian Basin
    • Bachanek J, Postawa T. 2010. Morphological evidence for hybridization in the sister species Myotis myotis and Myotis oxygnathus (Chiroptera: Vespertilionidae) in the Carpathian Basin. Acta Chiropterologica 12(2):439-48
    • (2010) Acta Chiropterologica , vol.12 , Issue.2 , pp. 439-448
    • Bachanek, J.1    Postawa, T.2
  • 115
    • 39049185515 scopus 로고    scopus 로고
    • Recurrent replacement of mtDNA and cryptic hybridization between two sibling bat species Myotis myotis and Myotis blythii
    • Berthier P, Excoffier L, Ruedi M. 2006. Recurrent replacement of mtDNA and cryptic hybridization between two sibling bat species Myotis myotis and Myotis blythii. Proc. R. Soc. B Biol. Sci. 273:3101-9
    • (2006) Proc. R. Soc. B Biol. Sci. , vol.273 , pp. 3101-3109
    • Berthier, P.1    Excoffier, L.2    Ruedi, M.3
  • 116
    • 84882620318 scopus 로고    scopus 로고
    • Hidden diversity in Senegalese bats and associated findings in the systematics of the family Vespertilionidae
    • Koubínová D, Irwin N, Hulva P, Koubek P, Zima J. 2013. Hidden diversity in Senegalese bats and associated findings in the systematics of the family Vespertilionidae. Front. Zool. 10:48
    • (2013) Front. Zool. , vol.10 , pp. 48
    • Koubínová, D.1    Irwin, N.2    Hulva, P.3    Koubek, P.4    Zima, J.5
  • 117
    • 33748449028 scopus 로고    scopus 로고
    • Speciation in mammals and genetic species concept
    • Baker BJ, Bradley RD. 2006. Speciation in mammals and genetic species concept. J. Mammology 87(4):643-62
    • (2006) J. Mammology , vol.87 , Issue.4 , pp. 643-662
    • Baker, B.J.1    Bradley, R.D.2
  • 119
    • 84976330786 scopus 로고    scopus 로고
    • Wing membrane biopsies for bat cytogenetics: Finding of 2n=54 in Irish Rhinolophus hipposideros (Rhinolophidae, Chiroptera, Mammalia) supports two geographically separated chromosomal variants in Europe
    • Kacprzyk J, Teeling EC, Kelleher C, Volleth M. 2016. Wing membrane biopsies for bat cytogenetics: finding of 2n=54 in Irish Rhinolophus hipposideros (Rhinolophidae, Chiroptera, Mammalia) supports two geographically separated chromosomal variants in Europe. Cytogenet. Genome. Res. 148(4):279-83
    • (2016) Cytogenet. Genome. Res. , vol.148 , Issue.4 , pp. 279-283
    • Kacprzyk, J.1    Teeling, E.C.2    Kelleher, C.3    Volleth, M.4
  • 120
    • 58149234737 scopus 로고    scopus 로고
    • Real-time DNA sequencing from single polymerase molecules
    • Eid J, Fehr A, Gray J, Luong K, Lyle J, et al. 2009. Real-time DNA sequencing from single polymerase molecules. Science 323(5910):133-38
    • (2009) Science , vol.323 , Issue.5910 , pp. 133-138
    • Eid, J.1    Fehr, A.2    Gray, J.3    Luong, K.4    Lyle, J.5
  • 121
    • 64449088698 scopus 로고    scopus 로고
    • Continuous base identification for singlemolecule nanopore DNA sequencing
    • Clarke J, Wu HC, Jayasinghe L, Patel A, Reid S, et al. 2009. Continuous base identification for singlemolecule nanopore DNA sequencing. Nat. Nanotechnol. 4(4):265-70
    • (2009) Nat. Nanotechnol. , vol.4 , Issue.4 , pp. 265-270
    • Clarke, J.1    Wu, H.C.2    Jayasinghe, L.3    Patel, A.4    Reid, S.5
  • 122
    • 84991694364 scopus 로고    scopus 로고
    • Phased diploid genome assembly with single-molecule real-time sequencing
    • Chin CS, Peluso P, Sedlazeck FJ, Nattestad M, Concepcion GT, et al. 2016. Phased diploid genome assembly with single-molecule real-time sequencing. Nat. Methods 13(12):1050-54
    • (2016) Nat. Methods , vol.13 , Issue.12 , pp. 1050-1054
    • Chin, C.S.1    Peluso, P.2    Sedlazeck, F.J.3    Nattestad, M.4    Concepcion, G.T.5
  • 124
    • 84925497196 scopus 로고    scopus 로고
    • Resolving the complexity of the human genome using single-molecule sequencing
    • ChaissonMJ, Huddleston J, DennisMY, Sudmant PH, Malig M, et al. 2015. Resolving the complexity of the human genome using single-molecule sequencing. Nature 517(7536):608-11
    • (2015) Nature , vol.517 , Issue.7536 , pp. 608-611
    • Chaisson, M.J.1    Huddleston, J.2    Dennis, M.Y.3    Sudmant, P.H.4    Malig, M.5
  • 125
    • 84942861757 scopus 로고    scopus 로고
    • Read clouds uncover variation in complex regions of the human genome
    • Bishara A, Liu Y, Weng Z, Kashef-Haghighi D, Newburger DE, et al. 2015. Read clouds uncover variation in complex regions of the human genome. Genome Res. 25(10):1570-80
    • (2015) Genome Res. , vol.25 , Issue.10 , pp. 1570-1580
    • Bishara, A.1    Liu, Y.2    Weng, Z.3    Kashef-Haghighi, D.4    Newburger, D.E.5
  • 127
    • 84913548467 scopus 로고    scopus 로고
    • In vitro, long-range sequence information for de novo genome assembly via transposase contiguity
    • Adey A, Kitzman JO, Burton JN, Daza R, Kumar A, et al. 2014. In vitro, long-range sequence information for de novo genome assembly via transposase contiguity. Genome Res. 24(12):2041-49
    • (2014) Genome Res. , vol.24 , Issue.12 , pp. 2041-2049
    • Adey, A.1    Kitzman, J.O.2    Burton, J.N.3    Daza, R.4    Kumar, A.5
  • 128
    • 70349873824 scopus 로고    scopus 로고
    • Comprehensive mapping of long-range interactions reveals folding principles of the human genome
    • Lieberman-Aiden E, Van Berkum NL, Williams L, Imakaev M, Ragoczy T, et al. 2009. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science 326(5950):289-93
    • (2009) Science , vol.326 , Issue.5950 , pp. 289-293
    • Lieberman-Aiden, E.1    Van Berkum, N.L.2    Williams, L.3    Imakaev, M.4    Ragoczy, T.5
  • 129
    • 85017022957 scopus 로고    scopus 로고
    • De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds
    • Dudchenko O, Batra SS, Omer AD, Nyquist SK, HoegerM, et al. 2017. De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds. Science 356(6333):92-95
    • (2017) Science , vol.356 , Issue.6333 , pp. 92-95
    • Dudchenko, O.1    Batra, S.S.2    Omer, A.D.3    Nyquist, S.K.4    Hoeger, M.5
  • 132
    • 84917678595 scopus 로고    scopus 로고
    • Comparative genomics reveals insights into avian genome evolution and adaptation
    • Zhang G, Li C, Li Q, Li B, Larkin DM, et al. 2014. Comparative genomics reveals insights into avian genome evolution and adaptation. Science 346(6215):1311-20
    • (2014) Science , vol.346 , Issue.6215 , pp. 1311-1320
    • Zhang, G.1    Li, C.2    Li, Q.3    Li, B.4    Larkin, D.M.5
  • 133
    • 84917708482 scopus 로고    scopus 로고
    • Whole-genome analyses resolve early branches in the tree of life of modern birds
    • Jarvis ED, Mirarab S, Aberer AJ, Li B, Houde P, et al. 2014. Whole-genome analyses resolve early branches in the tree of life of modern birds. Science 346(6215):1320-31
    • (2014) Science , vol.346 , Issue.6215 , pp. 1320-1331
    • Jarvis, E.D.1    Mirarab, S.2    Aberer, A.J.3    Li, B.4    Houde, P.5
  • 134
    • 84909606775 scopus 로고    scopus 로고
    • Phylogenomics resolves the timing and pattern of insect evolution
    • Misof B, Liu S, Meusemann K, Peters RS, Donath A, et al. 2014. Phylogenomics resolves the timing and pattern of insect evolution. Science 346(6210):763-67
    • (2014) Science , vol.346 , Issue.6210 , pp. 763-767
    • Misof, B.1    Liu, S.2    Meusemann, K.3    Peters, R.S.4    Donath, A.5
  • 135
    • 84909619344 scopus 로고    scopus 로고
    • Phylotranscriptomic analysis of the origin and early diversification of land plants
    • Wickett NJ, Mirarab S, Nguyen N, Warnow T, Carpenter E, et al. 2014. Phylotranscriptomic analysis of the origin and early diversification of land plants. PNAS 111(45):E4859-68
    • (2014) PNAS , vol.111 , Issue.45 , pp. E4859-E4868
    • Wickett, N.J.1    Mirarab, S.2    Nguyen, N.3    Warnow, T.4    Carpenter, E.5
  • 136
    • 84975221770 scopus 로고    scopus 로고
    • Mammal madness: Is the mammal tree of life not yet resolved
    • Foley NM, Springer MS, Teeling EC. 2016. Mammal madness: Is the mammal tree of life not yet resolved? Philos. Trans. R. Soc. B 371(1699):20150140
    • (2016) Philos. Trans. R. Soc. B , vol.371 , Issue.1699 , pp. 20150140
    • Foley, N.M.1    Springer, M.S.2    Teeling, E.C.3
  • 137
    • 84960406734 scopus 로고    scopus 로고
    • Nuclear introns outperform mitochondrial DNA in inter-specific phylogenetic reconstruction: Lessons from horseshoe bats (Rhinolophidae: Chiroptera)
    • Dool SE, Puechmaille SJ, Foley NM, Allegrini B, Bastian A, et al. 2016. Nuclear introns outperform mitochondrial DNA in inter-specific phylogenetic reconstruction: lessons from horseshoe bats (Rhinolophidae: Chiroptera). Mol. Phylogenet. Evol. 97:196-212
    • (2016) Mol. Phylogenet. Evol. , vol.97 , pp. 196-212
    • Dool, S.E.1    Puechmaille, S.J.2    Foley, N.M.3    Allegrini, B.4    Bastian, A.5
  • 138
    • 84955733217 scopus 로고    scopus 로고
    • Irrational exuberance for resolved species trees
    • Hahn MW, Nakhleh L. 2016. Irrational exuberance for resolved species trees. Evolution 70(1):7-17
    • (2016) Evolution , vol.70 , Issue.1 , pp. 7-17
    • Hahn, M.W.1    Nakhleh, L.2
  • 139
    • 85043475686 scopus 로고    scopus 로고
    • Conflicting evolutionary histories of the mitochondrial and nuclear genomes in New World Myotis bats
    • In press
    • Platt RN, Faircloth BC, Sullivan KAM, Kieran TJ, Glenn TC, et al. 2017. Conflicting evolutionary histories of the mitochondrial and nuclear genomes in New World Myotis bats. Syst. Biol. In press
    • (2017) Syst. Biol.
    • Platt, R.N.1    Faircloth, B.C.2    Sullivan, K.A.M.3    Kieran, T.J.4    Glenn, T.C.5
  • 140
    • 84978796135 scopus 로고    scopus 로고
    • Reticulation, divergence, and the phylogeography-phylogenetics continuum
    • Edwards SV, Potter S, Schmitt CJ, Bragg JG, Moritz C. 2016a. Reticulation, divergence, and the phylogeography-phylogenetics continuum. PNAS 113(29):8025-32
    • (2016) PNAS , vol.113 , Issue.29 , pp. 8025-8032
    • Edwards, S.V.1    Potter, S.2    Schmitt, C.J.3    Bragg, J.G.4    Moritz, C.5
  • 141
    • 84944911288 scopus 로고    scopus 로고
    • A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
    • Prum RO, Berv JS, Dornburg A, Field DJ, Townsend JP, et al. 2015. A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing. Nature 526:569-73
    • (2015) Nature , vol.526 , pp. 569-573
    • Prum, R.O.1    Berv, J.S.2    Dornburg, A.3    Field, D.J.4    Townsend, J.P.5
  • 142
    • 79960914105 scopus 로고    scopus 로고
    • Inference of human population history from individualwhole-genome sequences
    • Li H, Durbin R. 2011. Inference of human population history from individualwhole-genome sequences. Nature 475(7357):493-96
    • (2011) Nature , vol.475 , Issue.7357 , pp. 493-496
    • Li, H.1    Durbin, R.2
  • 143
    • 84905572361 scopus 로고    scopus 로고
    • Inferring human population size and separation history from multiple genome sequences
    • Schiffels S, Durbin R. 2014. Inferring human population size and separation history from multiple genome sequences. Nat. Genet. 46(8):919-25
    • (2014) Nat. Genet. , vol.46 , Issue.8 , pp. 919-925
    • Schiffels, S.1    Durbin, R.2
  • 145
    • 85021348818 scopus 로고    scopus 로고
    • The Wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp population genomics
    • Gopalakrishnan S, Castruita JAS, Sinding MHS, Kuderna LF, Räikkönen J, et al. 2017. The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics. BMC Genom. 18(1):495
    • (2017) BMC Genom. , vol.18 , Issue.1 , pp. 495
    • Gopalakrishnan, S.1    Castruita, J.A.S.2    Sinding, M.H.S.3    Kuderna, L.F.4    Räikkönen, J.5
  • 146
    • 84884596860 scopus 로고    scopus 로고
    • Molecular phylogenetic reconstructions identify East Asia as the cradle for the evolution of the cosmopolitan genus Myotis (Mammalia, Chiroptera)
    • Ruedi M, Stadelmann B, Gager Y, Douzery EJ, Francis CM, et al. 2013. Molecular phylogenetic reconstructions identify East Asia as the cradle for the evolution of the cosmopolitan genus Myotis (Mammalia, Chiroptera). Mol. Phylogenet. Evol. 69(3):437-49
    • (2013) Mol. Phylogenet. Evol. , vol.69 , Issue.3 , pp. 437-449
    • Ruedi, M.1    Stadelmann, B.2    Gager, Y.3    Douzery, E.J.4    Francis, C.M.5
  • 147
    • 77949497074 scopus 로고    scopus 로고
    • Bioinformatics challenges for genome-wide association studies
    • Moore JH, Asselbergs FW,Williams SM. 2010. Bioinformatics challenges for genome-wide association studies. Bioinformatics 26(4):445-55
    • (2010) Bioinformatics , vol.26 , Issue.4 , pp. 445-455
    • Moore, J.H.1    Asselbergs, F.W.2    Williams, S.M.3
  • 148
    • 84902096048 scopus 로고    scopus 로고
    • Development and applications of CRISPR-Cas9 for genome engineering
    • Hsu PD, Lander ES, Zhang F. 2014. Development and applications of CRISPR-Cas9 for genome engineering. Cell 157(6):1262-78
    • (2014) Cell , vol.157 , Issue.6 , pp. 1262-1278
    • Hsu, P.D.1    Lander, E.S.2    Zhang, F.3
  • 149
    • 33749836933 scopus 로고    scopus 로고
    • Singing mice, songbirds, and more: Models for FOXP2 function and dysfunction in human speech and language
    • White SA, Fisher SE, Geschwind DH, Scharff C, Holy TE. 2006. Singing mice, songbirds, and more: models for FOXP2 function and dysfunction in human speech and language. J. Neurosci. 26:10376-79
    • (2006) J. Neurosci. , vol.26 , pp. 10376-10379
    • White, S.A.1    Fisher, S.E.2    Geschwind, D.H.3    Scharff, C.4    Holy, T.E.5
  • 150
    • 38549176222 scopus 로고    scopus 로고
    • Incomplete and inaccurate vocal imitation after knockdown of FoxP2 in songbird basal ganglia nucleus Area X
    • Haesler S, Rochefort C, Georgi B, Licznerski P, Osten P, et al. 2007. Incomplete and inaccurate vocal imitation after knockdown of FoxP2 in songbird basal ganglia nucleus Area X. PLOS Biol. 5(12):e321
    • (2007) PLOS Biol. , vol.5 , Issue.12 , pp. e321
    • Haesler, S.1    Rochefort, C.2    Georgi, B.3    Licznerski, P.4    Osten, P.5
  • 151
    • 77958498211 scopus 로고    scopus 로고
    • Knockdown of FoxP2 alters spine density in Area X of the zebra finch
    • Schulz SB, Haesler S, Scharff C, Rochefort C. 2010. Knockdown of FoxP2 alters spine density in Area X of the zebra finch. Genes Brain Behav. 9(7):732-40
    • (2010) Genes Brain Behav. , vol.9 , Issue.7 , pp. 732-740
    • Schulz, S.B.1    Haesler, S.2    Scharff, C.3    Rochefort, C.4
  • 152
    • 79959436430 scopus 로고    scopus 로고
    • Evo-devo, deep homology and FoxP2: Implications for the evolution of speech and language
    • Scharff C, Petri J. 2011. Evo-devo, deep homology and FoxP2: implications for the evolution of speech and language. Philos. Trans. R. Soc. Lond. B Biol. Sci. 366(1574):2124-40
    • (2011) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.366 , Issue.1574 , pp. 2124-2140
    • Scharff, C.1    Petri, J.2
  • 154
    • 84968754806 scopus 로고    scopus 로고
    • FoxP2 directly regulates the reelin receptor VLDLR developmentally and by singing
    • Adam I, Mendoza E, Kobalz U, Wohlgemuth S, Scharff C. 2016. FoxP2 directly regulates the reelin receptor VLDLR developmentally and by singing. Mol. Cell. Neurosci. 74:96-105
    • (2016) Mol. Cell. Neurosci. , vol.74 , pp. 96-105
    • Adam, I.1    Mendoza, E.2    Kobalz, U.3    Wohlgemuth, S.4    Scharff, C.5
  • 155
    • 84869502241 scopus 로고    scopus 로고
    • ChIP-seq and beyond: New and improved methodologies to detect and characterize protein-DNA interactions
    • Furey TS. 2012. ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions. Nat. Rev. Genet. 13(12):840-52
    • (2012) Nat. Rev. Genet. , vol.13 , Issue.12 , pp. 840-852
    • Furey, T.S.1
  • 156
    • 84900873196 scopus 로고    scopus 로고
    • DNA topology and transcription
    • Kouzine F, Levens D, Baranello L. 2014. DNA topology and transcription. Nucleus 5(3):195-202
    • (2014) Nucleus , vol.5 , Issue.3 , pp. 195-202
    • Kouzine, F.1    Levens, D.2    Baranello, L.3
  • 158
    • 84901467575 scopus 로고    scopus 로고
    • Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    • Platt RN, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, et al. 2014. Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats. Mol. Biol. Evol. 31(6):1536-45
    • (2014) Mol. Biol. Evol. , vol.31 , Issue.6 , pp. 1536-1545
    • Platt, R.N.1    Vandewege, M.W.2    Kern, C.3    Schmidt, C.J.4    Hoffmann, F.G.5
  • 159
    • 84931320131 scopus 로고    scopus 로고
    • Molecular timescale of diversification of feeding strategy and morphology in New World leaf-nosed bats (Phyllostomidae): A phylogenetic perspective
    • Baker RJ, Bininda-Emonds OR, Mantilla-Meluk H, Porter CA, Van Den Bussche RA. 2012. Molecular timescale of diversification of feeding strategy and morphology in New World leaf-nosed bats (Phyllostomidae): a phylogenetic perspective. See Reference 29, pp. 385-409
    • (2012) See Reference , vol.29 , pp. 385-409
    • Baker, R.J.1    Bininda-Emonds, O.R.2    Mantilla-Meluk, H.3    Porter, C.A.4    Van Den Bussche, R.A.5
  • 161
    • 84978902241 scopus 로고    scopus 로고
    • Bats (Chiroptera: Noctilionoidea) challenge a recent origin of extant neotropical diversity
    • Rojas D, Warsi OM, Dávalos LM. 2016. Bats (Chiroptera: Noctilionoidea) challenge a recent origin of extant neotropical diversity. Syst. Biol. 65(3):432-48
    • (2016) Syst. Biol. , vol.65 , Issue.3 , pp. 432-448
    • Rojas, D.1    Warsi, O.M.2    Dávalos, L.M.3
  • 162
    • 84924078627 scopus 로고    scopus 로고
    • Convergent evolution of the genomes of marine mammals
    • Foote AD, Liu Y, Thomas GW, Vinař T, Alfoldi J, et al. 2015. Convergent evolution of the genomes of marine mammals. Nat. Genet. 47(3):272-75
    • (2015) Nat. Genet. , vol.47 , Issue.3 , pp. 272-275
    • Foote, A.D.1    Liu, Y.2    Thomas, G.W.3    Vinař, T.4    Alfoldi, J.5
  • 163
    • 84917708480 scopus 로고    scopus 로고
    • Complex evolutionary trajectories of sex chromosomes across bird taxa
    • Zhou Q, Zhang J, Bachtrog D, An N, Huang Q, et al. 2014. Complex evolutionary trajectories of sex chromosomes across bird taxa. Science 346(6215):1246338
    • (2014) Science , vol.346 , Issue.6215 , pp. 1246338
    • Zhou, Q.1    Zhang, J.2    Bachtrog, D.3    An, N.4    Huang, Q.5
  • 164
    • 84865790047 scopus 로고    scopus 로고
    • An integrated encyclopedia of DNA elements in the human genome
    • ENCODE Proj. Consort
    • ENCODE Proj. Consort. 2012. An integrated encyclopedia of DNA elements in the human genome. Nature 489(7414):57-74
    • (2012) Nature , vol.489 , Issue.7414 , pp. 57-74
  • 165
    • 84991609040 scopus 로고    scopus 로고
    • The dark side of the human genome
    • Chi KR. 2016. The dark side of the human genome. Nature 538(7624):275-77
    • (2016) Nature , vol.538 , Issue.7624 , pp. 275-277
    • Chi, K.R.1
  • 166
    • 84919949716 scopus 로고    scopus 로고
    • A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping
    • Rao SS, Huntley MH, Durand NC, Stamenova EK, Bochkov ID, et al. 2014. A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell 159(7):1665-80
    • (2014) Cell , vol.159 , Issue.7 , pp. 1665-1680
    • Rao, S.S.1    Huntley, M.H.2    Durand, N.C.3    Stamenova, E.K.4    Bochkov, I.D.5
  • 167
    • 85011884569 scopus 로고    scopus 로고
    • Functional roles of Aves class-specific cisregulatory elements on macroevolution of bird-specific features
    • Seki R, Li C, Fang Q, Hayashi S, Egawa S, et al. 2017. Functional roles of Aves class-specific cisregulatory elements on macroevolution of bird-specific features. Nat. Commun. 8:14229
    • (2017) Nat. Commun. , vol.8 , pp. 14229
    • Seki, R.1    Li, C.2    Fang, Q.3    Hayashi, S.4    Egawa, S.5
  • 168
    • 85014613467 scopus 로고    scopus 로고
    • Sequencing all life captivates biologists
    • Pennisi E. 2017. Sequencing all life captivates biologists. Science 355(6328):89-95
    • (2017) Science , vol.355 , Issue.6328 , pp. 89-95
    • Pennisi, E.1
  • 169
    • 85014908302 scopus 로고    scopus 로고
    • The genomes of two bat species with long constant frequency echolocation calls
    • Dong D, LeiM, Hua P, Pan YH, Mu S, et al. 2016. The genomes of two bat species with long constant frequency echolocation calls. Mol. Biol. Evol. 34:20-34
    • (2016) Mol. Biol. Evol. , vol.34 , pp. 20-34
    • Dong, D.1    Lei, M.2    Hua, P.3    Pan, Y.H.4    Mu, S.5
  • 170
    • 84883142476 scopus 로고    scopus 로고
    • Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii
    • Seim I, Fang X, Xiong Z, Lobanov AV, Huang Z, et al. 2013. Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii. Nat. Commun. 4:2212
    • (2013) Nat. Commun. , vol.4 , pp. 2212
    • Seim, I.1    Fang, X.2    Xiong, Z.3    Lobanov, A.V.4    Huang, Z.5
  • 171
    • 0033871684 scopus 로고    scopus 로고
    • Isolation of Hendra virus from pteropid bats: A natural reservoir of Hendra virus
    • Halpin K, Young PL, Field HE, Mackenzie JS. 2000. Isolation of Hendra virus from pteropid bats: a natural reservoir of Hendra virus. J. Gen. Virol. 81:1927-32
    • (2000) J. Gen. Virol. , vol.81 , pp. 1927-1932
    • Halpin, K.1    Young, P.L.2    Field, H.E.3    Mackenzie, J.S.4
  • 172
    • 81155131372 scopus 로고    scopus 로고
    • Pteropid bats are confirmed as the reservoir hosts of henipaviruses: A comprehensive experimental study of virus transmission
    • Halpin K, Hyatt AD, Fogarty R, Middleton D, Bingham J, et al. 2011. Pteropid bats are confirmed as the reservoir hosts of henipaviruses: a comprehensive experimental study of virus transmission. Am. J. Trop. Med. Hyg. 85:946-51
    • (2011) Am. J. Trop. Med. Hyg. , vol.85 , pp. 946-951
    • Halpin, K.1    Hyatt, A.D.2    Fogarty, R.3    Middleton, D.4    Bingham, J.5
  • 173
    • 84895172579 scopus 로고    scopus 로고
    • Recent observations on Australian bat lyssavirus tropism and viral entry
    • Weir LD, Annand JE, Reid AP, Broder CC. 2014. Recent observations on Australian bat lyssavirus tropism and viral entry. Viruses 6:909-26
    • (2014) Viruses , vol.6 , pp. 909-926
    • Weir, L.D.1    Annand, J.E.2    Reid, A.P.3    Broder, C.C.4
  • 174
    • 85021627488 scopus 로고    scopus 로고
    • Comparative analysis of European bat lyssavirus 1 pathogenicity in the mouse model
    • Eggerbauer E, Pfaff F, Finke S, Hoper D, Beer M, et al. 2017. Comparative analysis of European bat lyssavirus 1 pathogenicity in the mouse model. PLOS Negl. Trop. Dis. 11:e0005668
    • (2017) PLOS Negl. Trop. Dis. , vol.11 , pp. e0005668
    • Eggerbauer, E.1    Pfaff, F.2    Finke, S.3    Hoper, D.4    Beer, M.5
  • 176
    • 84889573658 scopus 로고    scopus 로고
    • Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor
    • Ge X-Y, Li J-L, Yang X-L, Chmura AA, Zhu G, et al. 2013. Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor. Nature 503:535-38
    • (2013) Nature , vol.503 , pp. 535-538
    • Ge, X.-Y.1    Li, J.-L.2    Yang, X.-L.3    Chmura, A.A.4    Zhu, G.5


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