메뉴 건너뛰기




Volumn 56, Issue 27, 2017, Pages 3443-3453

The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M β-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation

Author keywords

[No Author keywords available]

Indexed keywords

ACYLATION; ANTIBIOTICS; CRYSTALLOGRAPHY; HYDROLYSIS; X RAY CRYSTALLOGRAPHY;

EID: 85023166908     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/acs.biochem.7b00176     Document Type: Article
Times cited : (24)

References (49)
  • 1
    • 77955560486 scopus 로고    scopus 로고
    • Resistance to cephalosporins and carbapenems in Gram-negative bacterial pathogens
    • Pfeifer, Y., Cullik, A., and Witte, W. (2010) Resistance to cephalosporins and carbapenems in Gram-negative bacterial pathogens Int. J. Med. Microbiol. 300, 371-379 10.1016/j.ijmm.2010.04.005
    • (2010) Int. J. Med. Microbiol. , vol.300 , pp. 371-379
    • Pfeifer, Y.1    Cullik, A.2    Witte, W.3
  • 2
    • 74249108028 scopus 로고    scopus 로고
    • Three decades of beta-lactamase inhibitors
    • Drawz, S. M. and Bonomo, R. (2010) Three decades of beta-lactamase inhibitors Clin. Microbiol. Rev. 23, 160-201 10.1128/CMR.00037-09
    • (2010) Clin. Microbiol. Rev. , vol.23 , pp. 160-201
    • Drawz, S.M.1    Bonomo, R.2
  • 3
    • 0019326853 scopus 로고
    • The structure of β-lactamases
    • Ambler, R. P. (1980) The structure of β-lactamases Philos. Trans. R. Soc., B 289, 321-331 10.1098/rstb.1980.0049
    • (1980) Philos. Trans. R. Soc., B , vol.289 , pp. 321-331
    • Ambler, R.P.1
  • 6
    • 84880753527 scopus 로고    scopus 로고
    • CTX-M-type β-lactamases: A successful story of antibiotic resistance
    • D'Andrea, M. M., Arena, F., Pallecchi, L., and Rossolini, G. M. (2013) CTX-M-type β-lactamases: a successful story of antibiotic resistance Int. J. Med. Microbiol. 303, 305-317 10.1016/j.ijmm.2013.02.008
    • (2013) Int. J. Med. Microbiol. , vol.303 , pp. 305-317
    • D'Andrea, M.M.1    Arena, F.2    Pallecchi, L.3    Rossolini, G.M.4
  • 7
    • 0347362476 scopus 로고    scopus 로고
    • Growing group of extended-spectrum β-lactamases: The CTX-M enzymes
    • Bonnet, R. (2004) Growing group of extended-spectrum β-lactamases: the CTX-M enzymes Antimicrob. Agents Chemother. 48, 1-14 10.1128/AAC.48.1.1-14.2004
    • (2004) Antimicrob. Agents Chemother. , vol.48 , pp. 1-14
    • Bonnet, R.1
  • 8
    • 46249100954 scopus 로고    scopus 로고
    • Mutational events in cefotaximase extended-spectrum beta-lactamases of the CTX-M-1 cluster involved in ceftazidime resistance
    • Novais, A., Cantón, R., Coque, T. M., Moya, A., Baquero, F., and Galán, J. C. (2008) Mutational events in cefotaximase extended-spectrum beta-lactamases of the CTX-M-1 cluster involved in ceftazidime resistance Antimicrob. Agents Chemother. 52, 2377-2382 10.1128/AAC.01658-07
    • (2008) Antimicrob. Agents Chemother. , vol.52 , pp. 2377-2382
    • Novais, A.1    Cantón, R.2    Coque, T.M.3    Moya, A.4    Baquero, F.5    Galán, J.C.6
  • 10
    • 16244415566 scopus 로고    scopus 로고
    • Atomic resolution structures of CTX-M beta-lactamases: Extended spectrum activities from increased mobility and decreased stability
    • Chen, Y., Delmas, J., Sirot, J., Shoichet, B., and Bonnet, R. (2005) Atomic resolution structures of CTX-M beta-lactamases: extended spectrum activities from increased mobility and decreased stability J. Mol. Biol. 348, 349-362 10.1016/j.jmb.2005.02.010
    • (2005) J. Mol. Biol. , vol.348 , pp. 349-362
    • Chen, Y.1    Delmas, J.2    Sirot, J.3    Shoichet, B.4    Bonnet, R.5
  • 11
    • 84946207770 scopus 로고    scopus 로고
    • Characterization of the global stabilizing substitution A77V and its role in the evolution of CTX-M β-lactamases
    • Patel, M. P., Fryszczyn, B. G., and Palzkill, T. (2015) Characterization of the global stabilizing substitution A77V and its role in the evolution of CTX-M β-lactamases Antimicrob. Agents Chemother. 59, 6741-6748 10.1128/AAC.00618-15
    • (2015) Antimicrob. Agents Chemother. , vol.59 , pp. 6741-6748
    • Patel, M.P.1    Fryszczyn, B.G.2    Palzkill, T.3
  • 12
    • 36348944684 scopus 로고    scopus 로고
    • Structure and dynamics of CTX-M enzymes reveal insights into substrate accommodation by extended-spectrum beta-lactamases
    • Delmas, J., Chen, Y., Prati, F., Robin, F., Shoichet, B. K., and Bonnet, R. (2008) Structure and dynamics of CTX-M enzymes reveal insights into substrate accommodation by extended-spectrum beta-lactamases J. Mol. Biol. 375, 192-201 10.1016/j.jmb.2007.10.026
    • (2008) J. Mol. Biol. , vol.375 , pp. 192-201
    • Delmas, J.1    Chen, Y.2    Prati, F.3    Robin, F.4    Shoichet, B.K.5    Bonnet, R.6
  • 13
    • 2142745867 scopus 로고    scopus 로고
    • Role of a mutation at position 167 of CTX-M-19 in ceftazidime hydrolysis
    • Kimura, S., Ishiguro, M., Ishii, Y., Alba, J., and Yamaguchi, K. (2004) Role of a mutation at position 167 of CTX-M-19 in ceftazidime hydrolysis Antimicrob. Agents Chemother. 48, 1454-1460 10.1128/AAC.48.5.1454-1460.2004
    • (2004) Antimicrob. Agents Chemother. , vol.48 , pp. 1454-1460
    • Kimura, S.1    Ishiguro, M.2    Ishii, Y.3    Alba, J.4    Yamaguchi, K.5
  • 14
    • 0035191066 scopus 로고    scopus 로고
    • CTX-M-type extended-spectrum β-lactamase that hydrolyzes ceftazidime through a single amino acid substitution in the omega loop
    • Poirel, L., Naas, T., Le Thomas, I., Karim, A., Bingen, E., and Nordmann, P. (2001) CTX-M-type extended-spectrum β-lactamase that hydrolyzes ceftazidime through a single amino acid substitution in the omega loop Antimicrob. Agents Chemother. 45, 3355-3361 10.1128/AAC.45.12.3355-3361.2001
    • (2001) Antimicrob. Agents Chemother. , vol.45 , pp. 3355-3361
    • Poirel, L.1    Naas, T.2    Le Thomas, I.3    Karim, A.4    Bingen, E.5    Nordmann, P.6
  • 15
    • 14744274658 scopus 로고    scopus 로고
    • Experimental prediction of the evolution of ceftazidime resistance in the CTX-M-2 extended-spectrum beta-lactamase
    • Welsh, K. J., Barlow, M., Tenover, F. C., Biddle, J. W., Rasheed, J. K., Clark, L. A., and Mcgowan, J. E. (2005) Experimental prediction of the evolution of ceftazidime resistance in the CTX-M-2 extended-spectrum beta-lactamase Antimicrob. Agents Chemother. 49, 1242-1244 10.1128/AAC.49.3.1242-1244.2005
    • (2005) Antimicrob. Agents Chemother. , vol.49 , pp. 1242-1244
    • Welsh, K.J.1    Barlow, M.2    Tenover, F.C.3    Biddle, J.W.4    Rasheed, J.K.5    Clark, L.A.6    McGowan, J.E.7
  • 16
    • 0028821830 scopus 로고
    • Extended-spectrum and inhibitor-resistant TEM-type beta- lactamases: Mutations, specificity, and three-dimensional structure
    • Knox, J. R. (1995) Extended-spectrum and inhibitor-resistant TEM-type beta- lactamases: mutations, specificity, and three-dimensional structure Antimicrob. Agents Chemother. 39, 2593-601 10.1128/AAC.39.12.2593
    • (1995) Antimicrob. Agents Chemother. , vol.39 , pp. 2593-2601
    • Knox, J.R.1
  • 17
    • 0026801518 scopus 로고
    • Molecular structure of the acyl-enzyme intermediate in β-lactam hydrolysis at 1.7A resolution
    • Strynadka, N., Adachi, H., Jensen, S., Johns, K., Sielecki, A., Betzel, C., Sutoh, K., and James, M. (1992) Molecular structure of the acyl-enzyme intermediate in β-lactam hydrolysis at 1.7A resolution Nature 359, 700-705 10.1038/359700a0
    • (1992) Nature , vol.359 , pp. 700-705
    • Strynadka, N.1    Adachi, H.2    Jensen, S.3    Johns, K.4    Sielecki, A.5    Betzel, C.6    Sutoh, K.7    James, M.8
  • 18
    • 0031041590 scopus 로고    scopus 로고
    • Site-directed mutagenesis of glutamate 166 in two β-lactamases: Kinetic and molecular modeling studies
    • Guillaume, G., Vanhove, M., Lamotte-Brasseur, J., Ledent, P., Jamin, M., Joris, B., and Frere, J. (1997) Site-directed mutagenesis of glutamate 166 in two β-lactamases: kinetic and molecular modeling studies J. Biol. Chem. 272, 5438-5444 10.1074/jbc.272.9.5438
    • (1997) J. Biol. Chem. , vol.272 , pp. 5438-5444
    • Guillaume, G.1    Vanhove, M.2    Lamotte-Brasseur, J.3    Ledent, P.4    Jamin, M.5    Joris, B.6    Frere, J.7
  • 21
    • 0023042283 scopus 로고
    • Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes
    • Studier, F. W. and Moffatt, B. A. (1986) Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes J. Mol. Biol. 189, 113-130 10.1016/0022-2836(86)90385-2
    • (1986) J. Mol. Biol. , vol.189 , pp. 113-130
    • Studier, F.W.1    Moffatt, B.A.2
  • 29
    • 84927740260 scopus 로고    scopus 로고
    • A triple mutant in the ω-loop of TEM-1 β-lactamase changes the substrate profile via a large conformational change and an altered general base for catalysis
    • Stojanoski, V., Chow, D.-C., Hu, L., Sankaran, B., Gilbert, H. F., Prasad, B. V. V, and Palzkill, T. (2015) A triple mutant in the ω-loop of TEM-1 β-lactamase changes the substrate profile via a large conformational change and an altered general base for catalysis J. Biol. Chem. 290, 10382-10394 10.1074/jbc.M114.633438
    • (2015) J. Biol. Chem. , vol.290 , pp. 10382-10394
    • Stojanoski, V.1    Chow, D.-C.2    Hu, L.3    Sankaran, B.4    Gilbert, H.F.5    Prasad, B.V.V.6    Palzkill, T.7
  • 31
    • 0028870213 scopus 로고
    • Non-prolyl cis-trans peptide bond isomerization as a rate-determining step in protein unfolding and refolding
    • Odefey, C., Mayr, L. M., and Schmid, F. X. (1995) Non-prolyl cis-trans peptide bond isomerization as a rate-determining step in protein unfolding and refolding J. Mol. Biol. 245, 69-78 10.1016/S0022-2836(95)80039-5
    • (1995) J. Mol. Biol. , vol.245 , pp. 69-78
    • Odefey, C.1    Mayr, L.M.2    Schmid, F.X.3
  • 32
    • 26044455503 scopus 로고
    • Cis-trans energy difference for the peptide bond in the gas phase and in aqueous solution
    • Jorgensen, W. L. and Gao, J. (1988) Cis-trans energy difference for the peptide bond in the gas phase and in aqueous solution J. Am. Chem. Soc. 110, 4212-4216 10.1021/ja00221a020
    • (1988) J. Am. Chem. Soc. , vol.110 , pp. 4212-4216
    • Jorgensen, W.L.1    Gao, J.2
  • 33
    • 0032032930 scopus 로고    scopus 로고
    • Catalytic properties of class A β-lactamases:efficiency and diversity
    • Matagne, A., Lamotte-Brasseur, J., and Frère, J. (1998) Catalytic properties of class A β-lactamases:efficiency and diversity Biochem. J. 330, 581-598 10.1042/bj3300581
    • (1998) Biochem. J. , vol.330 , pp. 581-598
    • Matagne, A.1    Lamotte-Brasseur, J.2    Frère, J.3
  • 35
    • 77953729075 scopus 로고    scopus 로고
    • Structural insights into substrate recognition and product expulsion in CTX-M enzymes
    • Delmas, J., Leyssene, D., Dubois, D., Birck, C., Vazeille, E., Robin, F., and Bonnet, R. (2010) Structural insights into substrate recognition and product expulsion in CTX-M enzymes J. Mol. Biol. 400, 108-120 10.1016/j.jmb.2010.04.062
    • (2010) J. Mol. Biol. , vol.400 , pp. 108-120
    • Delmas, J.1    Leyssene, D.2    Dubois, D.3    Birck, C.4    Vazeille, E.5    Robin, F.6    Bonnet, R.7
  • 36
    • 0028168023 scopus 로고
    • Catalytic mechanism of active-site serine β-lactamases: Role of the conserved hydroxy group of the Lys-Thr(Ser)-Gly triad
    • Dubus, A., Wilkin, J., Raquet, X., Normark, S., and Frère, J. (1994) Catalytic mechanism of active-site serine β-lactamases: role of the conserved hydroxy group of the Lys-Thr(Ser)-Gly triad Biochem. J. 301, 485-494 10.1042/bj3010485
    • (1994) Biochem. J. , vol.301 , pp. 485-494
    • Dubus, A.1    Wilkin, J.2    Raquet, X.3    Normark, S.4    Frère, J.5
  • 37
    • 0027363464 scopus 로고
    • Critical hydrogen bonding by serine 235 for cephalosporinase activity of TEM-1 β-lactamase
    • Imtiaz, U., Manavathu, E. K., Lerner, S. A., and Mobashery, S. (1993) Critical hydrogen bonding by serine 235 for cephalosporinase activity of TEM-1 β-lactamase Antimicrob. Agents Chemother. 37, 2438-2442 10.1128/AAC.37.11.2438
    • (1993) Antimicrob. Agents Chemother. , vol.37 , pp. 2438-2442
    • Imtiaz, U.1    Manavathu, E.K.2    Lerner, S.A.3    Mobashery, S.4
  • 38
    • 0035957080 scopus 로고    scopus 로고
    • Structures of the acyl-enzyme complexes of the Staphylococcus aureus β-Lactamase mutant Glu166Asp:Asn170Gln with benzylpenicillin and cephaloridine
    • Chen, C. C. H. and Herzberg, O. (2001) Structures of the acyl-enzyme complexes of the Staphylococcus aureus β-Lactamase mutant Glu166Asp:Asn170Gln with benzylpenicillin and cephaloridine Biochemistry 40, 2351-2358 10.1021/bi002277h
    • (2001) Biochemistry , vol.40 , pp. 2351-2358
    • Chen, C.C.H.1    Herzberg, O.2
  • 39
    • 2242480185 scopus 로고    scopus 로고
    • Acyl-intermediate structures of the extended-spectrum class A beta-lactamase, Toho-1, in complex with cefotaxime, cephalothin, and benzylpenicillin
    • Shimamura, T., Ibuka, A., Fushinobu, S., Wakagi, T., Ishiguro, M., Ishii, Y., and Matsuzawa, H. (2002) Acyl-intermediate structures of the extended-spectrum class A beta-lactamase, Toho-1, in complex with cefotaxime, cephalothin, and benzylpenicillin J. Biol. Chem. 277, 46601-46608 10.1074/jbc.M207884200
    • (2002) J. Biol. Chem. , vol.277 , pp. 46601-46608
    • Shimamura, T.1    Ibuka, A.2    Fushinobu, S.3    Wakagi, T.4    Ishiguro, M.5    Ishii, Y.6    Matsuzawa, H.7
  • 40
    • 0035822659 scopus 로고    scopus 로고
    • Structures of ceftazidime and its transition-state analogue in complex with AmpC β-lactamase: Implications for resistance mutations and inhibitor design
    • Powers, R. A., Caselli, E., Focia, P. J., Prati, F., and Shoichet, B. K. (2001) Structures of ceftazidime and its transition-state analogue in complex with AmpC β-lactamase: implications for resistance mutations and inhibitor design Biochemistry 40, 9207-9214 10.1021/bi0109358
    • (2001) Biochemistry , vol.40 , pp. 9207-9214
    • Powers, R.A.1    Caselli, E.2    Focia, P.J.3    Prati, F.4    Shoichet, B.K.5
  • 41
    • 33846904590 scopus 로고    scopus 로고
    • Predictive analysis of ceftazidime hydrolysis in CTX-M-type β-lactamase family members with a mutational substitution at position 167
    • Kimura, S., Ishii, Y., Tateda, K., and Yamaguchi, K. (2007) Predictive analysis of ceftazidime hydrolysis in CTX-M-type β-lactamase family members with a mutational substitution at position 167 Int. J. Antimicrob. Agents 29, 326-331 10.1016/j.ijantimicag.2006.09.014
    • (2007) Int. J. Antimicrob. Agents , vol.29 , pp. 326-331
    • Kimura, S.1    Ishii, Y.2    Tateda, K.3    Yamaguchi, K.4
  • 42
    • 0036295508 scopus 로고    scopus 로고
    • Evolution of an antibiotic resistance enzyme constrained by stability and activity trade-offs
    • Wang, X., Minasov, G., and Shoichet, B. K. (2002) Evolution of an antibiotic resistance enzyme constrained by stability and activity trade-offs J. Mol. Biol. 320, 85-95 10.1016/S0022-2836(02)00400-X
    • (2002) J. Mol. Biol. , vol.320 , pp. 85-95
    • Wang, X.1    Minasov, G.2    Shoichet, B.K.3
  • 43
    • 0026703217 scopus 로고
    • Identification of amino acid substitutions that alter the substrate specificity of TEM-1 beta-lactamase
    • Palzkill, T. and Botstein, D. (1992) Identification of amino acid substitutions that alter the substrate specificity of TEM-1 beta-lactamase J. Bacteriol. 174, 5237-5243 10.1128/jb.174.16.5237-5243.1992
    • (1992) J. Bacteriol. , vol.174 , pp. 5237-5243
    • Palzkill, T.1    Botstein, D.2
  • 45
    • 0028222371 scopus 로고
    • Reversal of clavulanate resistance conferred by a Ser-244 mutant of TEM-1 β-lactamase as a result of a second mutation (Arg to ser at position 164) that enhances activity against ceftazidime
    • Imtiaz, U., Manavathu, E. K., Mobashery, S., and Lerner, S. A. (1994) Reversal of clavulanate resistance conferred by a Ser-244 mutant of TEM-1 β-lactamase as a result of a second mutation (Arg to Ser at position 164) that enhances activity against ceftazidime Antimicrob. Agents Chemother. 38, 1134-1139 10.1128/AAC.38.5.1134
    • (1994) Antimicrob. Agents Chemother. , vol.38 , pp. 1134-1139
    • Imtiaz, U.1    Manavathu, E.K.2    Mobashery, S.3    Lerner, S.A.4
  • 46
    • 0029775843 scopus 로고    scopus 로고
    • Evidence for structural elasticity of class A β-lactamases in the course of catalytic turnover of the novel cephalosporin cefepime
    • Taibi-tronche, P., Massova, I., Vakulenko, S. B., Lerner, S. A., and Mobashery, S. (1996) Evidence for structural elasticity of class A β-lactamases in the course of catalytic turnover of the novel cephalosporin cefepime J. Am. Chem. Soc. 118, 7441-7448 10.1021/ja9529753
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 7441-7448
    • Taibi-Tronche, P.1    Massova, I.2    Vakulenko, S.B.3    Lerner, S.A.4    Mobashery, S.5
  • 47
    • 54249109407 scopus 로고    scopus 로고
    • Genetic and structural characterization of an L201P global suppressor substitution in TEM-1 beta-lactamase
    • Marciano, D. C., Pennington, J. M., Wang, X., Wang, J., Chen, Y., Thomas, V. L., Shoichet, B. K., and Palzkill, T. (2008) Genetic and structural characterization of an L201P global suppressor substitution in TEM-1 beta-lactamase J. Mol. Biol. 384, 151-164 10.1016/j.jmb.2008.09.009
    • (2008) J. Mol. Biol. , vol.384 , pp. 151-164
    • Marciano, D.C.1    Pennington, J.M.2    Wang, X.3    Wang, J.4    Chen, Y.5    Thomas, V.L.6    Shoichet, B.K.7    Palzkill, T.8
  • 48
    • 0030788941 scopus 로고    scopus 로고
    • A natural polymorphism in beta-lactamase is a global suppressor
    • Huang, W. and Palzkill, T. (1997) A natural polymorphism in beta-lactamase is a global suppressor Proc. Natl. Acad. Sci. U. S. A. 94, 8801-8806 10.1073/pnas.94.16.8801
    • (1997) Proc. Natl. Acad. Sci. U. S. A. , vol.94 , pp. 8801-8806
    • Huang, W.1    Palzkill, T.2
  • 49
    • 74649086461 scopus 로고    scopus 로고
    • Structural bases for stability-function tradeoffs in antibiotic resistance
    • Thomas, V. L., McReynolds, A. C., and Shoichet, B. K. (2010) Structural bases for stability-function tradeoffs in antibiotic resistance J. Mol. Biol. 396, 47-59 10.1016/j.jmb.2009.11.005
    • (2010) J. Mol. Biol. , vol.396 , pp. 47-59
    • Thomas, V.L.1    McReynolds, A.C.2    Shoichet, B.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.