-
1
-
-
84255197842
-
Cancer immunotherapy comes of age
-
Mellman I, Coukos G, Dranoff G. Cancer immunotherapy comes of age. Nature. 2011;480:480-9.
-
(2011)
Nature.
, vol.480
, pp. 480-489
-
-
Mellman, I.1
Coukos, G.2
Dranoff, G.3
-
2
-
-
84862859820
-
Safety, activity, and immune correlates of anti-PD-1 antibody in cancer
-
Topalian SL, Hodi FS, Brahmer JR, Gettinger SN, Smith DC, McDermott DF, et al. Safety, activity, and immune correlates of anti-PD-1 antibody in cancer. N Engl J Med. 2012;366:2443-54.
-
(2012)
N Engl J Med.
, vol.366
, pp. 2443-2454
-
-
Topalian, S.L.1
Hodi, F.S.2
Brahmer, J.R.3
Gettinger, S.N.4
Smith, D.C.5
McDermott, D.F.6
-
3
-
-
84929150634
-
Immunologic checkpoints blockade in renal cell, prostate, and urothelial malignancies
-
Bracarda S, Altavilla A, Hamzaj A, Sisani M, Marrocolo F, Del Buono S, et al. Immunologic checkpoints blockade in renal cell, prostate, and urothelial malignancies. Semin Oncol. 2015;42:495-505.
-
(2015)
Semin Oncol.
, vol.42
, pp. 495-505
-
-
Bracarda, S.1
Altavilla, A.2
Hamzaj, A.3
Sisani, M.4
Marrocolo, F.5
Buono, S.6
-
4
-
-
84932628341
-
PD-1 Blockade in tumors with mismatch-repair deficiency
-
Le DT, Uram JN, Wang H, Bartlett BR, Kemberling H, Eyring AD, et al. PD-1 Blockade in tumors with mismatch-repair deficiency. N Engl J Med. 2015;372:2509-20.
-
(2015)
N Engl J Med.
, vol.372
, pp. 2509-2520
-
-
Le, D.T.1
Uram, J.N.2
Wang, H.3
Bartlett, B.R.4
Kemberling, H.5
Eyring, A.D.6
-
5
-
-
84946607195
-
Nivolumab versus everolimus in advanced renal-cell carcinoma
-
Motzer RJ, Escudier B, McDermott DF, George S, Hammers HJ, Srinivas S, et al. Nivolumab versus everolimus in advanced renal-cell carcinoma. N Engl J Med. 2015;373:1803-13.
-
(2015)
N Engl J Med.
, vol.373
, pp. 1803-1813
-
-
Motzer, R.J.1
Escudier, B.2
McDermott, D.F.3
George, S.4
Hammers, H.J.5
Srinivas, S.6
-
6
-
-
84959577118
-
Atezolizumab in patients with locally advanced and metastatic urothelial carcinoma who have progressed following treatment with platinum-based chemotherapy: a single-arm, multicentre, phase 2 trial
-
Rosenberg JE, Hoffman-Censits J, Powles T, van der Heijden MS, Balar AV, Necchi A, et al. Atezolizumab in patients with locally advanced and metastatic urothelial carcinoma who have progressed following treatment with platinum-based chemotherapy: a single-arm, multicentre, phase 2 trial. Lancet. 2016;387:1909-20.
-
(2016)
Lancet.
, vol.387
, pp. 1909-1920
-
-
Rosenberg, J.E.1
Hoffman-Censits, J.2
Powles, T.3
Heijden, M.S.4
Balar, A.V.5
Necchi, A.6
-
7
-
-
84858766182
-
The blockade of immune checkpoints in cancer immunotherapy
-
Pardoll DM. The blockade of immune checkpoints in cancer immunotherapy. Nat Rev Cancer. 2012;12:252-64.
-
(2012)
Nat Rev Cancer.
, vol.12
, pp. 252-264
-
-
Pardoll, D.M.1
-
8
-
-
0027078670
-
Costimulation of antitumor immunity by the B7 counterreceptor for the T lymphocyte molecules CD28 and CTLA-4
-
Chen L, Ashe S, Brady WA, Hellstrom I, Hellstrom KE, Ledbetter JA, et al. Costimulation of antitumor immunity by the B7 counterreceptor for the T lymphocyte molecules CD28 and CTLA-4. Cell. 1992;71:1093-102.
-
(1992)
Cell.
, vol.71
, pp. 1093-1102
-
-
Chen, L.1
Ashe, S.2
Brady, W.A.3
Hellstrom, I.4
Hellstrom, K.E.5
Ledbetter, J.A.6
-
9
-
-
0029947568
-
Enhancement of antitumor immunity by CTLA-4 blockade
-
Leach DR, Krummel MF, Allison JP. Enhancement of antitumor immunity by CTLA-4 blockade. Science. 1996;271:1734-6.
-
(1996)
Science.
, vol.271
, pp. 1734-1736
-
-
Leach, D.R.1
Krummel, M.F.2
Allison, J.P.3
-
10
-
-
13444270323
-
Blockade of B7-H1 and PD-1 by monoclonal antibodies potentiates cancer therapeutic immunity
-
Hirano F, Kaneko K, Tamura H, Dong H, Wang S, Ichikawa M, et al. Blockade of B7-H1 and PD-1 by monoclonal antibodies potentiates cancer therapeutic immunity. Cancer Res. 2005;65:1089-96.
-
(2005)
Cancer Res.
, vol.65
, pp. 1089-1096
-
-
Hirano, F.1
Kaneko, K.2
Tamura, H.3
Dong, H.4
Wang, S.5
Ichikawa, M.6
-
11
-
-
77955487541
-
First-line chemoimmunotherapy in metastatic breast carcinoma: combination of paclitaxel and IMP321 (LAG-3Ig) enhances immune responses and antitumor activity
-
Brignone C, Gutierrez M, Mefti F, Brain E, Jarcau R, Cvitkovic F, et al. First-line chemoimmunotherapy in metastatic breast carcinoma: combination of paclitaxel and IMP321 (LAG-3Ig) enhances immune responses and antitumor activity. J Transl Med. 2010;8:71.
-
(2010)
J Transl Med.
, vol.8
, pp. 71
-
-
Brignone, C.1
Gutierrez, M.2
Mefti, F.3
Brain, E.4
Jarcau, R.5
Cvitkovic, F.6
-
12
-
-
84908005764
-
A first in man phase I trial of the oral immunomodulator, indoximod, combined with docetaxel in patients with metastatic solid tumors
-
Soliman HH, Jackson E, Neuger T, Dees EC, Harvey RD, Han H, et al. A first in man phase I trial of the oral immunomodulator, indoximod, combined with docetaxel in patients with metastatic solid tumors. Oncotarget. 2014;5:8136-46.
-
(2014)
Oncotarget.
, vol.5
, pp. 8136-8146
-
-
Soliman, H.H.1
Jackson, E.2
Neuger, T.3
Dees, E.C.4
Harvey, R.D.5
Han, H.6
-
13
-
-
84925021172
-
CTLA4 blockade in mesothelioma: finally a competing strategy over cytotoxic/target therapy?
-
Calabro L, Ceresoli GL, di Pietro A, Cutaia O, Morra A, Ibrahim R, et al. CTLA4 blockade in mesothelioma: finally a competing strategy over cytotoxic/target therapy? Cancer Immunol Immunother. 2015;64:105-12.
-
(2015)
Cancer Immunol Immunother.
, vol.64
, pp. 105-112
-
-
Calabro, L.1
Ceresoli, G.L.2
Pietro, A.3
Cutaia, O.4
Morra, A.5
Ibrahim, R.6
-
14
-
-
84997764928
-
Mismatch repair deficiency associated with complete remission to combination programmed cell death ligand immune therapy in a patient with sporadic urothelial carcinoma: immunotheranostic considerations
-
Castro MP, Goldstein N. Mismatch repair deficiency associated with complete remission to combination programmed cell death ligand immune therapy in a patient with sporadic urothelial carcinoma: immunotheranostic considerations. J Immunother Cancer. 2015;3:58.
-
(2015)
J Immunother Cancer.
, vol.3
, pp. 58
-
-
Castro, M.P.1
Goldstein, N.2
-
16
-
-
84929208764
-
PD-L1 blockade for cancer treatment: MEDI4736
-
Ibrahim R, Stewart R, Shalabi A. PD-L1 blockade for cancer treatment: MEDI4736. Semin Oncol. 2015;42:474-83.
-
(2015)
Semin Oncol.
, vol.42
, pp. 474-483
-
-
Ibrahim, R.1
Stewart, R.2
Shalabi, A.3
-
17
-
-
84954093852
-
Molecular pathways: targets IDO1 and other tryptophan dioxygenases for cancer immunotherapy
-
Zhai L, Spranger S, Binder DC, Gritsina G, Lauing KL, Giles FJ, et al. Molecular pathways: targets IDO1 and other tryptophan dioxygenases for cancer immunotherapy. Clin Cancer Res. 2015;21:5427-33.
-
(2015)
Clin Cancer Res.
, vol.21
, pp. 5427-5433
-
-
Zhai, L.1
Spranger, S.2
Binder, D.C.3
Gritsina, G.4
Lauing, K.L.5
Giles, F.J.6
-
18
-
-
84859393995
-
CTLA-4 blockade with ipilimumab: long-term follow-up of 177 patients with metastatic melanoma
-
Prieto PA, Yang JC, Sherry RM, Hughes MS, Kammula US, White DE, et al. CTLA-4 blockade with ipilimumab: long-term follow-up of 177 patients with metastatic melanoma. Clin Cancer Res. 2012;18:2039-47.
-
(2012)
Clin Cancer Res.
, vol.18
, pp. 2039-2047
-
-
Prieto, P.A.1
Yang, J.C.2
Sherry, R.M.3
Hughes, M.S.4
Kammula, U.S.5
White, D.E.6
-
19
-
-
84963621254
-
Mechanism-driven biomarkers to guide immune checkpoint blockade in cancer therapy
-
Topalian SL, Taube JM, Anders RA, Pardoll DM. Mechanism-driven biomarkers to guide immune checkpoint blockade in cancer therapy. Nat Rev Cancer. 2016;16:275-87.
-
(2016)
Nat Rev Cancer.
, vol.16
, pp. 275-287
-
-
Topalian, S.L.1
Taube, J.M.2
Anders, R.A.3
Pardoll, D.M.4
-
20
-
-
84928761118
-
Cancer immunology. Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer
-
Rizvi NA, Hellmann MD, Snyder A, Kvistborg P, Makarov V, Havel JJ, et al. Cancer immunology. Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer. Science. 2015;348:124-8.
-
(2015)
Science
, vol.348
, pp. 124-128
-
-
Rizvi, N.A.1
Hellmann, M.D.2
Snyder, A.3
Kvistborg, P.4
Makarov, V.5
Havel, J.J.6
-
21
-
-
84918828514
-
Genetic basis for clinical response to CTLA-4 blockade in melanoma
-
Snyder A, Makarov V, Merghoub T, Yuan J, Zaretsky JM, Desrichard A, et al. Genetic basis for clinical response to CTLA-4 blockade in melanoma. N Engl J Med. 2014;371:2189-99.
-
(2014)
N Engl J Med.
, vol.371
, pp. 2189-2199
-
-
Snyder, A.1
Makarov, V.2
Merghoub, T.3
Yuan, J.4
Zaretsky, J.M.5
Desrichard, A.6
-
22
-
-
84872841412
-
Tumor exome analysis reveals neoantigen-specific T-cell reactivity in an ipilimumab-responsive melanoma
-
Van Rooij N, van Buuren MM, Philips D, Velds A, Toeves M, Heemskerk B, et al. Tumor exome analysis reveals neoantigen-specific T-cell reactivity in an ipilimumab-responsive melanoma. JCO. 2013;31:e439-42.
-
(2013)
JCO.
, vol.31
-
-
Rooij, N.1
Buuren, M.M.2
Philips, D.3
Velds, A.4
Toeves, M.5
Heemskerk, B.6
-
23
-
-
84943516465
-
Genomic correlates of response to CTLA4 blockade in metastatic melanoma
-
Van Allen EM, Miao D, Schilling B, Shukla SA, Blank C, Zimmer L, et al. Genomic correlates of response to CTLA4 blockade in metastatic melanoma. Science. 2015;350:207-11.
-
(2015)
Science.
, vol.350
, pp. 207-211
-
-
Allen, E.M.1
Miao, D.2
Schilling, B.3
Shukla, S.A.4
Blank, C.5
Zimmer, L.6
-
24
-
-
0033992478
-
p53 and human cancer: the first ten thousand mutations
-
Hainaut P, Hollstein M. p53 and human cancer: the first ten thousand mutations. Adv Cancer Res. 2000;77:81-137.
-
(2000)
Adv Cancer Res.
, vol.77
, pp. 81-137
-
-
Hainaut, P.1
Hollstein, M.2
-
25
-
-
0029806936
-
Preferential formation of benzo[a]pyrene adducts at lung cancer mutational hotspots in P53
-
Denissenko MF, Pao A, Tang M, Pfeifer GP. Preferential formation of benzo[a]pyrene adducts at lung cancer mutational hotspots in P53. Science. 1996;274:430-2.
-
(1996)
Science.
, vol.274
, pp. 430-432
-
-
Denissenko, M.F.1
Pao, A.2
Tang, M.3
Pfeifer, G.P.4
-
26
-
-
84994470617
-
Mutational signatures associated with tobacco smoking in human cancer
-
Alexandrov LB, Ju YS, Haase K, Van Loo P, Martincorena I, Nik-Zainal F, et al. Mutational signatures associated with tobacco smoking in human cancer. Science. 2016;354:618-22.
-
(2016)
Science.
, vol.354
, pp. 618-622
-
-
Alexandrov, L.B.1
Ju, Y.S.2
Haase, K.3
Loo, P.4
Martincorena, I.5
Nik-Zainal, F.6
-
27
-
-
0025719491
-
A role for sunlight in skin cancer: UV-induced p53 mutations in squamous cell carcinoma
-
Brash DE, Rudolph JA, Simon JA, Lin A, McKenna GJ, Baden HP, et al. A role for sunlight in skin cancer: UV-induced p53 mutations in squamous cell carcinoma. Proc Natl Acad Sci U S A. 1991;88:10124-8.
-
(1991)
Proc Natl Acad Sci U S A.
, vol.88
, pp. 10124-10128
-
-
Brash, D.E.1
Rudolph, J.A.2
Simon, J.A.3
Lin, A.4
McKenna, G.J.5
Baden, H.P.6
-
28
-
-
84882837534
-
Signatures of mutational processes in human cancer
-
Alexandrov LB, Nik-Zainal S, Wedge DC, Aparicio SA, Behjati S, Biankin AV, et al. Signatures of mutational processes in human cancer. Nature. 2013;500:415-21.
-
(2013)
Nature.
, vol.500
, pp. 415-421
-
-
Alexandrov, L.B.1
Nik-Zainal, S.2
Wedge, D.C.3
Aparicio, S.A.4
Behjati, S.5
Biankin, A.V.6
-
29
-
-
0038419826
-
Cancer, cadmium, and genome integrity
-
McMurray CT, Tainer JA. Cancer, cadmium, and genome integrity. Nat Genet. 2003;34:239-41.
-
(2003)
Nat Genet.
, vol.34
, pp. 239-241
-
-
McMurray, C.T.1
Tainer, J.A.2
-
30
-
-
70350504453
-
The DNA-damage response in human biology and disease
-
Jackson SP, Bartek J. The DNA-damage response in human biology and disease. Nature. 2009;461:1071-8.
-
(2009)
Nature.
, vol.461
, pp. 1071-1078
-
-
Jackson, S.P.1
Bartek, J.2
-
32
-
-
0028564949
-
Mismatch repair, genetic stability, and cancer
-
Modrich P. Mismatch repair, genetic stability, and cancer. Science. 1994;266:1959-60.
-
(1994)
Science.
, vol.266
, pp. 1959-1960
-
-
Modrich, P.1
-
33
-
-
0028128601
-
MLH1, PMS1, and MSH2 interactions during the initiation of DNA mismatch repair in yeast
-
Prolla TA, Pang Q, Alani E, Kolodner RD, Liskay RM. MLH1, PMS1, and MSH2 interactions during the initiation of DNA mismatch repair in yeast. Science. 1994;265:1091-3.
-
(1994)
Science.
, vol.265
, pp. 1091-1093
-
-
Prolla, T.A.1
Pang, Q.2
Alani, E.3
Kolodner, R.D.4
Liskay, R.M.5
-
34
-
-
33749247070
-
Overexpression of the DNA mismatch repair factor, PMS2, confers hypermutability and DNA damage tolerance
-
Gibson SL, Narayanan L, Hegan DC, Buermeyer AB, Liskay RM, Glazer PM. Overexpression of the DNA mismatch repair factor, PMS2, confers hypermutability and DNA damage tolerance. Cancer Lett. 2006;244:195-202.
-
(2006)
Cancer Lett.
, vol.244
, pp. 195-202
-
-
Gibson, S.L.1
Narayanan, L.2
Hegan, D.C.3
Buermeyer, A.B.4
Liskay, R.M.5
Glazer, P.M.6
-
35
-
-
0033615013
-
Mice defective in the DNA mismatch gene PMS2 are hypersensitive to MNU induced thymic lymphoma and are partially protected by transgenic expression of human MGMT
-
Qin X, Liu L, Gerson SL. Mice defective in the DNA mismatch gene PMS2 are hypersensitive to MNU induced thymic lymphoma and are partially protected by transgenic expression of human MGMT. Oncogene. 1999;18:4394-400.
-
(1999)
Oncogene.
, vol.18
, pp. 4394-4400
-
-
Qin, X.1
Liu, L.2
Gerson, S.L.3
-
36
-
-
10344228783
-
Altered expression of hMSH2 and hMLH1 in tumors with microsatellite instability and genetic alterations in mismatch repair genes
-
Thibodeau SN, French AJ, Roche PC, Cunningham JM, Tester DJ, Lindor NM. Altered expression of hMSH2 and hMLH1 in tumors with microsatellite instability and genetic alterations in mismatch repair genes. Cancer Res. 1996;56:4836-40.
-
(1996)
Cancer Res.
, vol.56
, pp. 4836-4840
-
-
Thibodeau, S.N.1
French, A.J.2
Roche, P.C.3
Cunningham, J.M.4
Tester, D.J.5
Lindor, N.M.6
-
37
-
-
0036569940
-
Mutations at coding repeat sequences in mismatch repair-deficient human cancers toward a new concept of target genes for instability
-
Duval A, Hamelin R. Mutations at coding repeat sequences in mismatch repair-deficient human cancers toward a new concept of target genes for instability. Cancer Res. 2002;62:2447-54.
-
(2002)
Cancer Res.
, vol.62
, pp. 2447-2454
-
-
Duval, A.1
Hamelin, R.2
-
38
-
-
0037445248
-
Role of DNA mismatch repair defects in the pathogenesis of human cancer
-
Peltomäki P. Role of DNA mismatch repair defects in the pathogenesis of human cancer. JCO. 2003;21:1174-9.
-
(2003)
JCO.
, vol.21
, pp. 1174-1179
-
-
Peltomäki, P.1
-
39
-
-
0036644870
-
Methylation of adenomatous polyposis coli in endometrial cancer occurs more frequently in tumors with microsatellite instability phenotype
-
Zysman M, Saka A, Millar A, Knight J, Chapman W, Bapat B. Methylation of adenomatous polyposis coli in endometrial cancer occurs more frequently in tumors with microsatellite instability phenotype. Cancer Res. 2002;62:3663-6.
-
(2002)
Cancer Res.
, vol.62
, pp. 3663-3666
-
-
Zysman, M.1
Saka, A.2
Millar, A.3
Knight, J.4
Chapman, W.5
Bapat, B.6
-
40
-
-
0034330224
-
Lynch syndrome: genetics, natural history, genetic counseling, and prevention
-
Lynch HT, Lynch J. Lynch syndrome: genetics, natural history, genetic counseling, and prevention. J Clin Oncol. 2000;18:19S-31.
-
(2000)
J Clin Oncol.
, vol.18
, pp. 19S-31
-
-
Lynch, H.T.1
Lynch, J.2
-
41
-
-
15644366959
-
Drastic genetic instability of tumors and normal tissues in Turcot syndrome
-
Miyaki M, Nishio J, Konishi M, Kikuchi-Yanoshita R. Drastic genetic instability of tumors and normal tissues in Turcot syndrome. Oncogene. 1997;15:2877-81.
-
(1997)
Oncogene.
, vol.15
, pp. 2877-2881
-
-
Miyaki, M.1
Nishio, J.2
Konishi, M.3
Kikuchi-Yanoshita, R.4
-
42
-
-
4444292985
-
Highly penetrant hereditary cancer syndromes
-
Nagy R, Sweet K, Eng C. Highly penetrant hereditary cancer syndromes. Oncogene. 2004;23:6445-70.
-
(2004)
Oncogene.
, vol.23
, pp. 6445-6470
-
-
Nagy, R.1
Sweet, K.2
Eng, C.3
-
43
-
-
84894353372
-
Somatic mutations in MLH1 and MSH2 are a frequent cause of mismatch-repair deficiency in Lynch syndrome-like tumors
-
Mensenkamp AR, Vogelaar IP, van Zelst-Stams WA, Goossens M, Ouchene H, Hendriks-Cornelissen SJ, et al. Somatic mutations in MLH1 and MSH2 are a frequent cause of mismatch-repair deficiency in Lynch syndrome-like tumors. Gastroenterology. 2014;146:643-6. e8.
-
(2014)
Gastroenterology
, vol.146
, pp. 643-646
-
-
Mensenkamp, A.R.1
Vogelaar, I.P.2
Zelst-Stams, W.A.3
Goossens, M.4
Ouchene, H.5
Hendriks-Cornelissen, S.J.6
-
44
-
-
34447336941
-
Polymerase ε participates in leading-strand DNA replication
-
Pursell ZF, Isoz I, Lundström EB, Johansson E, Yeast KTA, DNA. Polymerase ε participates in leading-strand DNA replication. Science. 2007;317:127-30.
-
(2007)
Science.
, vol.317
, pp. 127-130
-
-
Pursell, Z.F.1
Isoz, I.2
Lundström, E.B.3
Johansson, E.4
Yeast, K.T.A.5
-
45
-
-
84877747678
-
DNA polymerase ε and δ exonuclease domain mutations in endometrial cancer
-
Church DN, Briggs SE, Palles C, Domingo E, Kearsey SJ, Grimes JM, et al. DNA polymerase ε and δ exonuclease domain mutations in endometrial cancer. Hum Mol Gen. 2013;22:2820-8.
-
(2013)
Hum Mol Gen.
, vol.22
, pp. 2820-2828
-
-
Church, D.N.1
Briggs, S.E.2
Palles, C.3
Domingo, E.4
Kearsey, S.J.5
Grimes, J.M.6
-
46
-
-
84873096362
-
Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas
-
Palles C, Cazier JB, Howarth KM, Domingo E, Jones AM, Broderick P, et al. Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas. Nat Genet. 2013;45:136-44.
-
(2013)
Nat Genet.
, vol.45
, pp. 136-144
-
-
Palles, C.1
Cazier, J.B.2
Howarth, K.M.3
Domingo, E.4
Jones, A.M.5
Broderick, P.6
-
48
-
-
84877769352
-
Germline and somatic polymerase ε and δ mutations define a new class of hypermutated colorectal and endometrial cancers
-
Briggs S, Tomlinson I. Germline and somatic polymerase ε and δ mutations define a new class of hypermutated colorectal and endometrial cancers. J Pathol. 2013;230:148-53.
-
(2013)
J Pathol.
, vol.230
, pp. 148-153
-
-
Briggs, S.1
Tomlinson, I.2
-
49
-
-
0035259827
-
Retroviral recombination: what drives the switch?
-
Negroni M, Buc H. Retroviral recombination: what drives the switch? Nat Rev Mol Cell Bio. 2001;2:151-5.
-
(2001)
Nat Rev Mol Cell Bio.
, vol.2
, pp. 151-155
-
-
Negroni, M.1
Buc, H.2
-
50
-
-
34248379012
-
Impact of mutant p53 functional properties on TP53 mutation patterns and tumor phenotype: lessons from recent developments in the IARC TP53 database
-
Petitjean A, Mathe E, Kato S, Ishioka C, Tavtigian SV, Hainaut P, et al. Impact of mutant p53 functional properties on TP53 mutation patterns and tumor phenotype: lessons from recent developments in the IARC TP53 database. Hum Mutat. 2007;28:622-9.
-
(2007)
Hum Mutat.
, vol.28
, pp. 622-629
-
-
Petitjean, A.1
Mathe, E.2
Kato, S.3
Ishioka, C.4
Tavtigian, S.V.5
Hainaut, P.6
-
51
-
-
84880507665
-
Mutational heterogeneity in cancer and the search for new cancer-associated genes
-
Lawrence MS, Stojanov P, Polak P, Kryukov GV, Cibulskis K, Sivachenko A, et al. Mutational heterogeneity in cancer and the search for new cancer-associated genes. Nature. 2013;499:214-8.
-
(2013)
Nature.
, vol.499
, pp. 214-218
-
-
Lawrence, M.S.1
Stojanov, P.2
Polak, P.3
Kryukov, G.V.4
Cibulskis, K.5
Sivachenko, A.6
-
52
-
-
84946615376
-
-
Campesato LF, Barroso-Sousa R, Jimenez L, Correa BR, Sabbaga J, Hoff PM, et al. Oncotarget. 2015;6:34221-7.
-
(2015)
Oncotarget.
, vol.6
, pp. 34221-34227
-
-
Campesato, L.F.1
Barroso-Sousa, R.2
Jimenez, L.3
Correa, B.R.4
Sabbaga, J.5
Hoff, P.M.6
-
53
-
-
85016150420
-
Targeted next generation sequencing identifies markers of response to PD-1 blockade
-
Johnson DB, Frampton GM, Rioth MJ, Yusko E, Xu Y, Guo X, et al. Targeted next generation sequencing identifies markers of response to PD-1 blockade. Cancer Immunol Res. 2016;4:959-67.
-
(2016)
Cancer Immunol Res.
, vol.4
, pp. 959-967
-
-
Johnson, D.B.1
Frampton, G.M.2
Rioth, M.J.3
Yusko, E.4
Xu, Y.5
Guo, X.6
-
54
-
-
84884994218
-
The Cancer Genome Atlas Pan-Cancer analysis project
-
Network CGAR, Weinstein JN, Colisson EA, Mills GB, Shaw KR, Ozenberger BA, et al. The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet. 2013;45:1113-20.
-
(2013)
Nat Genet.
, vol.45
, pp. 1113-1120
-
-
Network, C.G.A.R.1
Weinstein, J.N.2
Colisson, E.A.3
Mills, G.B.4
Shaw, K.R.5
Ozenberger, B.A.6
-
55
-
-
84887491073
-
Development and validation of a clinical cancer genomic profiling test based on massively parallel DNA sequencing
-
Frampton GM, Fichtenholtz A, Otto GA, Wang K, Downing SR, He J, et al. Development and validation of a clinical cancer genomic profiling test based on massively parallel DNA sequencing. Nat Biotechnol. 2013;31:1023-31.
-
(2013)
Nat Biotechnol.
, vol.31
, pp. 1023-1031
-
-
Frampton, G.M.1
Fichtenholtz, A.2
Otto, G.A.3
Wang, K.4
Downing, S.R.5
He, J.6
-
56
-
-
84993661482
-
Integrated genomic DNA/RNA profiling of hematologic malignancies in the clinical setting
-
He J, Abdel-Wahab O, Nahas MK, Rampal RK, Intlekofer AM, Patel J, et al. Integrated genomic DNA/RNA profiling of hematologic malignancies in the clinical setting. Blood. 2016;127:3004-14.
-
(2016)
Blood.
, vol.127
, pp. 3004-3014
-
-
He, J.1
Abdel-Wahab, O.2
Nahas, M.K.3
Rampal, R.K.4
Intlekofer, A.M.5
Patel, J.6
-
57
-
-
84923989372
-
Combined hereditary and somatic mutations of replication error repair genes result in rapid onset of ultra-hypermutated cancers
-
Shlien A, Campbell BB, de Borja R, Alexandrov LB, Merico D, Wedge D, et al. Combined hereditary and somatic mutations of replication error repair genes result in rapid onset of ultra-hypermutated cancers. Nat Genet. 2015;47:257-62.
-
(2015)
Nat Genet.
, vol.47
, pp. 257-262
-
-
Shlien, A.1
Campbell, B.B.2
Borja, R.3
Alexandrov, L.B.4
Merico, D.5
Wedge, D.6
-
58
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li H, Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics. 2009;25:1754-60.
-
(2009)
Bioinformatics.
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
59
-
-
77957579023
-
Improved variant discovery through local re-alignment of short-read next-generation sequencing data using SRMA
-
Homer N, Nelson SF. Improved variant discovery through local re-alignment of short-read next-generation sequencing data using SRMA. Genome Biol. 2010;11:R99.
-
(2010)
Genome Biol.
, vol.11
, pp. R99
-
-
Homer, N.1
Nelson, S.F.2
-
60
-
-
77956295988
-
-
McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, et al. Genome Res. 2010;20:1297-303.
-
(2010)
Genome Res.
, vol.20
, pp. 1297-1303
-
-
McKenna, A.1
Hanna, M.2
Banks, E.3
Sivachenko, A.4
Cibulskis, K.5
Kernytsky, A.6
-
61
-
-
84874025843
-
Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
-
Cibulskis K, Lawrence MS, Carter SL, Sivachenko A, Jaffe D, Sougnez C, et al.Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat Biotechnol. 2013;31:213-9.
-
(2013)
Nat Biotechnol
, vol.31
, pp. 213-219
-
-
Cibulskis, K.1
Lawrence, M.S.2
Carter, S.L.3
Sivachenko, A.4
Jaffe, D.5
Sougnez, C.6
-
62
-
-
84861427327
-
Melanoma genome sequencing reveals frequent PREX2 mutations
-
Berger MF, Hodis E, Heffernan TP, Deribe YL, Lawrence MS, Protopopov A, et al. Melanoma genome sequencing reveals frequent PREX2 mutations. Nature. 2012;485:502-6.
-
(2012)
Nature.
, vol.485
, pp. 502-506
-
-
Berger, M.F.1
Hodis, E.2
Heffernan, T.P.3
Deribe, Y.L.4
Lawrence, M.S.5
Protopopov, A.6
-
63
-
-
3843084078
-
The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website
-
Bamford S, Dawson E, Forbes S, Clements J, Pettett R, Dogan A, et al. The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website. Br J Cancer. 2004;91:355-8.
-
(2004)
Br J Cancer.
, vol.91
, pp. 355-358
-
-
Bamford, S.1
Dawson, E.2
Forbes, S.3
Clements, J.4
Pettett, R.5
Dogan, A.6
-
64
-
-
84966374422
-
A computational method for somatic versus germline variant status determination from targeted next-generation sequencing of clinical cancer specimens without a matched normal control
-
Sun JX, Frampton G, Wang K, Ross JS, Miller VA, Stephens PJ, et al. A computational method for somatic versus germline variant status determination from targeted next-generation sequencing of clinical cancer specimens without a matched normal control. Cancer Res. 2014;74(19S):1893.
-
(2014)
Cancer Res
, vol.74
, Issue.19
, pp. 1893
-
-
Sun, J.X.1
Frampton, G.2
Wang, K.3
Ross, J.S.4
Miller, V.A.5
Stephens, P.J.6
-
65
-
-
84982253941
-
Analysis of protein-coding genetic variation in 60,706 humans
-
Lek M, Karczewski KJ, Minikel EV, Samocha KE, Banks E, Fennell T, et al. Analysis of protein-coding genetic variation in 60,706 humans. Nature. 2016;536:285-91.
-
(2016)
Nature.
, vol.536
, pp. 285-291
-
-
Lek, M.1
Karczewski, K.J.2
Minikel, E.V.3
Samocha, K.E.4
Banks, E.5
Fennell, T.6
-
67
-
-
84897427928
-
A common cancer-associated DNA polymerase ε mutation causes an exceptionally strong mutator phenotype, indicating fidelity defects distinct from loss of proofreading
-
Kane DP, Shcherbakova PV. A common cancer-associated DNA polymerase ε mutation causes an exceptionally strong mutator phenotype, indicating fidelity defects distinct from loss of proofreading. Cancer Res. 2014;74:1895-901.
-
(2014)
Cancer Res.
, vol.74
, pp. 1895-1901
-
-
Kane, D.P.1
Shcherbakova, P.V.2
-
68
-
-
84929628542
-
An integrative approach to predicting the functional effects of non-coding and coding sequence variation
-
Shihab HA, Rogers MF, Gough J, Mort M, Cooper DN, Day IN, et al. An integrative approach to predicting the functional effects of non-coding and coding sequence variation. Bioinformatics. 2015;31:1536-43.
-
(2015)
Bioinformatics.
, vol.31
, pp. 1536-1543
-
-
Shihab, H.A.1
Rogers, M.F.2
Gough, J.3
Mort, M.4
Cooper, D.N.5
Day, I.N.6
-
69
-
-
84958257565
-
Predicting effects of noncoding variants with deep learning-based sequence model
-
Zhou J, Troyanskaya OG. Predicting effects of noncoding variants with deep learning-based sequence model. Nat Methods. 2015;12:931-4.
-
(2015)
Nat Methods.
, vol.12
, pp. 931-934
-
-
Zhou, J.1
Troyanskaya, O.G.2
-
70
-
-
85015007138
-
Fast, scalable prediction of deleterious noncoding variants from functional and population genomic data
-
Huang YH, Gulko B, Siepel A. Fast, scalable prediction of deleterious noncoding variants from functional and population genomic data. Nat Genet. 2017.
-
(2017)
Nat Genet.
-
-
Huang, Y.H.1
Gulko, B.2
Siepel, A.3
-
71
-
-
84982791184
-
The structural basis of modified nucleosome recognition by 53BP1
-
Wilson MD, Benlekbir S, Fradet-Turcotte A, Sherker A, Julien JP, McEwan A, et al. The structural basis of modified nucleosome recognition by 53BP1. Nature. 2016;536:100-3.
-
(2016)
Nature.
, vol.536
, pp. 100-103
-
-
Wilson, M.D.1
Benlekbir, S.2
Fradet-Turcotte, A.3
Sherker, A.4
Julien, J.P.5
McEwan, A.6
-
72
-
-
84976330858
-
53BP1 fosters fidelity of homology-directed DNA repair
-
Ochs F, Somyajit K, Altmeyer M, Rask MB, Lukas J, Lukas C. 53BP1 fosters fidelity of homology-directed DNA repair. Nat Struct Mol Biol. 2016;23:714-21.
-
(2016)
Nat Struct Mol Biol.
, vol.23
, pp. 714-721
-
-
Ochs, F.1
Somyajit, K.2
Altmeyer, M.3
Rask, M.B.4
Lukas, J.5
Lukas, C.6
-
73
-
-
84874189784
-
Highly recurrent TERT promoter mutations in human melanoma
-
Huang FW, Hodis E, Xu MJ, Kryukov GV, Chin L, Garraway LA. Highly recurrent TERT promoter mutations in human melanoma. Science. 2013;339:957-9.
-
(2013)
Science.
, vol.339
, pp. 957-959
-
-
Huang, F.W.1
Hodis, E.2
Xu, M.J.3
Kryukov, G.V.4
Chin, L.5
Garraway, L.A.6
-
75
-
-
84973131266
-
Aberrant PD-L1 expression through 3'-UTR disruption in multiple cancers
-
Kataoka K, Shiraishi Y, Takeda Y, Sakata S, Matsumoto M, Nagano S, et al. Aberrant PD-L1 expression through 3'-UTR disruption in multiple cancers. Nature. 2016;534:402-6.
-
(2016)
Nature.
, vol.534
, pp. 402-406
-
-
Kataoka, K.1
Shiraishi, Y.2
Takeda, Y.3
Sakata, S.4
Matsumoto, M.5
Nagano, S.6
|