-
1
-
-
2342419732
-
DNA replication fidelity
-
Kunkel, T.A. (2004) DNA replication fidelity. J. Biol. Chem., 279, 16895-16898.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16895-16898
-
-
Kunkel, T.A.1
-
2
-
-
34447336941
-
Yeast DNA polymerase epsilon participates in leading-strand DNA replication
-
Pursell, Z.F., Isoz, I., Lundström, E-B., Johansson, E. and Kunkel, T.A. (2007) Yeast DNA polymerase epsilon participates in leading-strand DNA replication. Science, 317, 127-130.
-
(2007)
Science
, vol.317
, pp. 127-130
-
-
Pursell, Z.F.1
Isoz, I.2
Lundström, E.-B.3
Johansson, E.4
Kunkel, T.A.5
-
3
-
-
42949119884
-
Division of labor at the eukaryotic replication fork
-
McElhinny, S.A., Gordenin, D.A., Stith, C.M., Burgers, P.M.J. and Kunkel, T.A. (2008) Division of labor at the eukaryotic replication fork. Mol. Cell., 30, 137-144.
-
(2008)
Mol. Cell.
, vol.30
, pp. 137-144
-
-
McElhinny, S.A.1
Gordenin, D.A.2
Stith, C.M.3
Burgers, P.M.J.4
Kunkel, T.A.5
-
4
-
-
78049270970
-
Genome-wide model for the normal eukaryotic DNA replication fork
-
Larrea, A.A., Lujan, S.A., Nick McElhinny, S.A., Mieczkowski, P.A., Resnick, M.A., Gordenin, D.A. and Kunkel, T.A. (2010) Genome-wide model for the normal eukaryotic DNA replication fork. Proc. Natl Acad. Sci. USA, 107, 17674-17679.
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 17674-17679
-
-
Larrea, A.A.1
Lujan, S.A.2
Nick McElhinny, S.A.3
Mieczkowski, P.A.4
Resnick, M.A.5
Gordenin, D.A.6
Kunkel, T.A.7
-
5
-
-
84855267435
-
The major roles of DNA polymerases epsilon and delta at the eukaryotic replication fork are evolutionarily conserved
-
Miyabe, I., Kunkel, T.A. and Carr, A.M. (2011) The major roles of DNA polymerases epsilon and delta at the eukaryotic replication fork are evolutionarily conserved. PLoS Genet., 7, e1002407.
-
(2011)
PLoS Genet.
, vol.7
-
-
Miyabe, I.1
Kunkel, T.A.2
Carr, A.M.3
-
6
-
-
0025900035
-
The 3' to 5' exonuclease activity located in the DNA polymerase delta subunit of Saccharomyces cerevisiae is required for accurate replication
-
Simon, M., Giot, L. and Faye, G. (1991) The 3' to 5' exonuclease activity located in the DNA polymerase delta subunit of Saccharomyces cerevisiae is required for accurate replication. EMBO J., 10, 2165-2170.
-
(1991)
EMBO J.
, vol.10
, pp. 2165-2170
-
-
Simon, M.1
Giot, L.2
Faye, G.3
-
7
-
-
0034958108
-
Defective DNA polymerase delta proofreading causes cancer susceptibility in mice
-
Goldsby, R.E., Lawrence, N.A., Hays, L.E., Olmsted, E.A., Chen, X., Singh, M. and Preston, B.D. (2001) Defective DNA polymerase delta proofreading causes cancer susceptibility in mice. Nat. Med., 7, 638-639.
-
(2001)
Nat. Med.
, vol.7
, pp. 638-639
-
-
Goldsby, R.E.1
Lawrence, N.A.2
Hays, L.E.3
Olmsted, E.A.4
Chen, X.5
Singh, M.6
Preston, B.D.7
-
8
-
-
0037180555
-
High incidence of epithelial cancers in mice deficient for DNA polymerase delta proofreading
-
Goldsby, R.E. (2002) High incidence of epithelial cancers in mice deficient for DNA polymerase delta proofreading. Proc. Natl Acad. Sci. USA, 99, 15560-15565.
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 15560-15565
-
-
Goldsby, R.E.1
-
9
-
-
70350126567
-
DNA polymerase and proofreading suppress discrete mutator and cancer phenotypes in mice
-
Albertson, T.M., Ogawa, M., Bugni, J.M., Hays, L.E., Chen, Y., Wang, Y., Treuting, P.M., Heddle, J.A., Goldsby, R.E. and Preston, B.D. (2009) DNA polymerase and proofreading suppress discrete mutator and cancer phenotypes in mice. Proc. Natl Acad. Sci. USA, 106, 17101-17104.
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 17101-17104
-
-
Albertson, T.M.1
Ogawa, M.2
Bugni, J.M.3
Hays, L.E.4
Chen, Y.5
Wang, Y.6
Treuting, P.M.7
Heddle, J.A.8
Goldsby, R.E.9
Preston, B.D.10
-
10
-
-
0026004621
-
Eukaryotic DNA polymerase amino acid sequence required for 3 ' -5 ' exonuclease activity
-
Morrison, A., Bell, J.B., Kunkel, T.A. and Sugino, A. (1991) Eukaryotic DNA polymerase amino acid sequence required for 3 ' -5 ' exonuclease activity. Proc. Natl Acad. Sci. USA., 88, 9473-9477.
-
(1991)
Proc. Natl Acad. Sci. USA.
, vol.88
, pp. 9473-9477
-
-
Morrison, A.1
Bell, J.B.2
Kunkel, T.A.3
Sugino, A.4
-
11
-
-
33645216188
-
Mutator phenotypes caused by substitution at a conserved motif A residue in eukaryotic DNA polymerase delta
-
Venkatesan, R.N., Hsu, J.J., Lawrence, N.A., Preston, B.D. and Loeb, L.A. (2006) Mutator phenotypes caused by substitution at a conserved motif A residue in eukaryotic DNA polymerase delta. J. Biol. Chem., 281, 4486-4494.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 4486-4494
-
-
Venkatesan, R.N.1
Hsu, J.J.2
Lawrence, N.A.3
Preston, B.D.4
Loeb, L.A.5
-
13
-
-
0036478899
-
Inherited variants of MYH associated with somatic G:C→T:A mutations in colorectal tumors
-
Al-Tassan, N., Chmiel, N.H., Maynard, J., Fleming, N., Livingston, A.L., Williams, G.T., Hodges, A.K., Davies, D.R., David, S.S., Sampson, J.R. et al. (2002) Inherited variants of MYH associated with somatic G:C→T:A mutations in colorectal tumors. Nat. Genet., 30, 227-232.
-
(2002)
Nat. Genet.
, vol.30
, pp. 227-232
-
-
Al-Tassan, N.1
Chmiel, N.H.2
Maynard, J.3
Fleming, N.4
Livingston, A.L.5
Williams, G.T.6
Hodges, A.K.7
Davies, D.R.8
David, S.S.9
Sampson, J.R.10
-
14
-
-
0037468517
-
Multiple colorectal adenomas, classic adenomatous polyposis, and germ-line mutations in MYH
-
Sieber, O.M., Lipton, L., Crabtree, M., Heinimann, K., Fidalgo, P., Phillips, R.K., Bisgaard, M.L., Orntoft, T.F., Aaltonen, L.A., Hodgson, S.V. et al. (2003) Multiple colorectal adenomas, classic adenomatous polyposis, and germ-line mutations in MYH. N. Engl. J. Med., 348, 791-799.
-
(2003)
N. Engl. J. Med.
, vol.348
, pp. 791-799
-
-
Sieber, O.M.1
Lipton, L.2
Crabtree, M.3
Heinimann, K.4
Fidalgo, P.5
Phillips, R.K.6
Bisgaard, M.L.7
Orntoft, T.F.8
Aaltonen, L.A.9
Hodgson, S.V.10
-
15
-
-
84873096362
-
Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas
-
Palles, C., Cazier, J-B., Howarth, K.M., Domingo, E., Jones, A.M., Broderick, P., Kemp, Z., Spain, S.L., Almeida, E.G., Salguero, I. et al. (2013) Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas. Nat. Genet., 45, 136-144.
-
(2013)
Nat. Genet.
, vol.45
, pp. 136-144
-
-
Palles, C.1
Cazier, J.-B.2
Howarth, K.M.3
Domingo, E.4
Jones, A.M.5
Broderick, P.6
Kemp, Z.7
Spain, S.L.8
Almeida, E.G.9
Salguero, I.10
-
16
-
-
84863922124
-
Comprehensive molecular characterization of human colon and rectal cancer
-
Cancer Genome Atlas Research Network
-
Cancer Genome Atlas Research Network. (2012) Comprehensive molecular characterization of human colon and rectal cancer. Nature, 487, 330-337.
-
(2012)
Nature
, vol.487
, pp. 330-337
-
-
-
17
-
-
84865459654
-
Recurrent R-spondin fusions in colon cancer
-
Seshagiri, S., Stawiski, E.W., Durinck, S., Modrusan, Z., Storm, E.E., Conboy, C.B., Chadhuri, S., Guan, Y., Janakiraman, V., Jaiswal, B.S. et al. (2012) Recurrent R-spondin fusions in colon cancer. Nature, 488, 660-664.
-
(2012)
Nature
, vol.488
, pp. 660-664
-
-
Seshagiri, S.1
Stawiski, E.W.2
Durinck, S.3
Modrusan, Z.4
Storm, E.E.5
Conboy, C.B.6
Chadhuri, S.7
Guan, Y.8
Janakiraman, V.9
Jaiswal, B.S.10
-
19
-
-
0023754044
-
Amino acid changes coded by bacteriophage T4 DNA polymerase mutator mutants
-
Reha-Krantz, L.J. (1988) Amino acid changes coded by bacteriophage T4 DNA polymerase mutator mutants. Relating structure to function. J. Mol. Biol., 202, 711-724.
-
(1988)
Relating structure to function. J. Mol. Biol.
, vol.202
, pp. 711-724
-
-
Reha-Krantz, L.J.1
-
20
-
-
0035942104
-
The 3'-.5' exonuclease of DNA polymerase can substitute for the 5' flap endonuclease Rad27/Fen1 in processing Okazaki fragments and preventing genome instability
-
Jin, Y.H., Obert, R., Burgers, P.M.J., Kunkel, T.A., Resnick, M.A. and Gordenin, D.A. (2001) The 3'-.5' exonuclease of DNA polymerase can substitute for the 5' flap endonuclease Rad27/Fen1 in processing Okazaki fragments and preventing genome instability. Proc. Natl Acad. Sci. USA, 98, 5122-5127.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 5122-5127
-
-
Jin, Y.H.1
Obert, R.2
Burgers, P.M.J.3
Kunkel, T.A.4
Resnick, M.A.5
Gordenin, D.A.6
-
21
-
-
80055094218
-
Mutator suppression and escape from replication error-induced extinction in yeast
-
Herr, A.J., Ogawa, M., Lawrence, N.A., Williams, L.N., Eggington, J.M., Singh, M., Smith, R.A. and Preston, B.D. (2011) Mutator suppression and escape from replication error-induced extinction in yeast. PLoS Genet., 7, e1002282.
-
(2011)
PLoS Genet.
, vol.7
-
-
Herr, A.J.1
Ogawa, M.2
Lawrence, N.A.3
Williams, L.N.4
Eggington, J.M.5
Singh, M.6
Smith, R.A.7
Preston, B.D.8
-
22
-
-
84866894408
-
Comprehensive genomic characterization of squamous cell lung cancers
-
Cancer Genome Atlas Research Network.
-
Cancer Genome Atlas Research Network. (2012) Comprehensive genomic characterization of squamous cell lung cancers. Nature, 489, 519-525.
-
(2012)
Nature
, vol.489
, pp. 519-525
-
-
-
23
-
-
79951811449
-
Concurrent genetic alterations in DNA polymerase proofreading and mismatch repair in human colorectal cancer
-
Yoshida, R., Miyashita, K., Inoue, M., Shimamoto, A., Yan, Z., Egashira, A., Oki, E., Kakeji, Y., Oda, S. and Maehara, Y. (2010) Concurrent genetic alterations in DNA polymerase proofreading and mismatch repair in human colorectal cancer. Eur. J. Hum. Genet., 19, 320-325.
-
(2010)
Eur. J. Hum. Genet.
, vol.19
, pp. 320-325
-
-
Yoshida, R.1
Miyashita, K.2
Inoue, M.3
Shimamoto, A.4
Yan, Z.5
Egashira, A.6
Oki, E.7
Kakeji, Y.8
Oda, S.9
Maehara, Y.10
-
24
-
-
84873059633
-
Endometrial carcinoma: molecular alterations involved in tumor development and progression
-
Yeramian, A., Moreno-Bueno, G., Dolcet, X., Catasus, L., Abal, M., Colas, E., Reventos, J., Palacios, J., Prat, J. and Matias-Guiu, X. (2013) Endometrial carcinoma: molecular alterations involved in tumor development and progression. Oncogene, 32, 403-413.
-
(2013)
Oncogene
, vol.32
, pp. 403-413
-
-
Yeramian, A.1
Moreno-Bueno, G.2
Dolcet, X.3
Catasus, L.4
Abal, M.5
Colas, E.6
Reventos, J.7
Palacios, J.8
Prat, J.9
Matias-Guiu, X.10
-
25
-
-
0038670783
-
Frequent hypermethylation of MLH1 promoter in normal endometrium of patients with endometrial cancers
-
Kanaya, T., Kyo, S., Maida, Y., Yatabe, N., Tanaka, M., Nakamura, M. and Inoue, M. (2003) Frequent hypermethylation of MLH1 promoter in normal endometrium of patients with endometrial cancers. Oncogene, 22, 2352-2360.
-
(2003)
Oncogene
, vol.22
, pp. 2352-2360
-
-
Kanaya, T.1
Kyo, S.2
Maida, Y.3
Yatabe, N.4
Tanaka, M.5
Nakamura, M.6
Inoue, M.7
-
26
-
-
0032997736
-
MLH1 promoter methylation and gene silencing is the primary cause of microsatellite instability in sporadic endometrial cancers
-
Simpkins, S.B., Bocker, T., Swisher, E.M., Mutch, D.G., Gersell, D.J., Kovatich, A.J., Palazzo, J.P., Fishel, R. and Goodfellow, P.J. (1999) MLH1 promoter methylation and gene silencing is the primary cause of microsatellite instability in sporadic endometrial cancers. Hum. Mol. Genet., 8, 661-666.
-
(1999)
Hum. Mol. Genet.
, vol.8
, pp. 661-666
-
-
Simpkins, S.B.1
Bocker, T.2
Swisher, E.M.3
Mutch, D.G.4
Gersell, D.J.5
Kovatich, A.J.6
Palazzo, J.P.7
Fishel, R.8
Goodfellow, P.J.9
-
27
-
-
0032588388
-
The 3'.3' exonuclease Exo1 have major roles in postreplication mutation avoidance in Saccharomyces cerevisiae
-
Tran, H.T., Gordenin, D.A. and Resnick, M.A. (1999) The 3'.5' exonucleases of DNA polymerases delta and epsilon and the 5'.3' exonuclease Exo1 have major roles in postreplication mutation avoidance in Saccharomyces cerevisiae. Mol. Cell. Biol., 19, 2000-2007.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 2000-2007
-
-
Tran, H.T.1
Gordenin, D.A.2
Resnick, M.A.3
-
28
-
-
75749102647
-
Prognostic role of KRAS and BRAF in stage II and III resected colon cancer: results of the translational study on the PETACC-3, EORTC 40993, SAKK 60-00 trial
-
Roth, A.D., Tejpar, S., Delorenzi, M., Yan, P., Fiocca, R., Klingbiel, D., Dietrich, D., Biesmans, B., Bodoky, G., Barone, C. et al. (2010) Prognostic role of KRAS and BRAF in stage II and III resected colon cancer: results of the translational study on the PETACC-3, EORTC 40993, SAKK 60-00 trial. J. Clin. Oncol., 28, 466-474.
-
(2010)
J. Clin. Oncol.
, vol.28
, pp. 466-474
-
-
Roth, A.D.1
Tejpar, S.2
Delorenzi, M.3
Yan, P.4
Fiocca, R.5
Klingbiel, D.6
Dietrich, D.7
Biesmans, B.8
Bodoky, G.9
Barone, C.10
-
29
-
-
80051820416
-
Microsatellite instability and loss of heterozygosity at chromosomal location 18q: prospective evaluation of biomarkers for stages II and III colon cancer-a study of CALGB 9581 and 89803
-
Bertagnolli, M.M., Redston, M., Compton, C.C., Niedzwiecki, D., Mayer, R.J., Goldberg, R.M., Colacchio, T.A., Saltz, L.B. and Warren, R.S. (2011) Microsatellite instability and loss of heterozygosity at chromosomal location 18q: prospective evaluation of biomarkers for stages II and III colon cancer-a study of CALGB 9581 and 89803. J. Clin. Oncol., 29, 3153-3162.
-
(2011)
J. Clin. Oncol.
, vol.29
, pp. 3153-3162
-
-
Bertagnolli, M.M.1
Redston, M.2
Compton, C.C.3
Niedzwiecki, D.4
Mayer, R.J.5
Goldberg, R.M.6
Colacchio, T.A.7
Saltz, L.B.8
Warren, R.S.9
-
30
-
-
69949128706
-
Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase d
-
Swan, M.K., Johnson, R.E., Prakash, L., Prakash, S. and Aggarwal, A.K. (2009) Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase d. Nat. Struct. Mol. Biol., 16, 979-986.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 979-986
-
-
Swan, M.K.1
Johnson, R.E.2
Prakash, L.3
Prakash, S.4
Aggarwal, A.K.5
-
31
-
-
0029666424
-
Crystal structures of an NH 2-terminal fragment of T4 DNA polymerase and its complexes with single-stranded DNA and with divalent metal ions
-
Wang, J., Yu, P., Lin, T.C., Konigsberg, W.H. and Steitz, T.A. (1996) Crystal structures of an NH 2-terminal fragment of T4 DNA polymerase and its complexes with single-stranded DNA and with divalent metal ions. Biochem., 35, 8110-8119.
-
(1996)
Biochem.
, vol.35
, pp. 8110-8119
-
-
Wang, J.1
Yu, P.2
Lin, T.C.3
Konigsberg, W.H.4
Steitz, T.A.5
-
32
-
-
77956534324
-
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
-
Wang, K., Li, M. and Hakonarson, H. (2010) ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res., 38, e164.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Wang, K.1
Li, M.2
Hakonarson, H.3
-
33
-
-
77955801615
-
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
-
Goecks, J., Nekrutenko, A. and Taylor, J. (2010) Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol., 11, R86.
-
(2010)
Genome Biol.
, vol.11
-
-
Goecks, J.1
Nekrutenko, A.2
Taylor, J.3
|