-
1
-
-
84944755171
-
Engineering of genetic control tools in Synechocystis sp. PCC 6803 using rational design techniques
-
Albers SC, Gallegos VA, Peebles CA. 2015. Engineering of genetic control tools in Synechocystis sp. PCC 6803 using rational design techniques. J Biotechnol 216:36–46.
-
(2015)
J Biotechnol
, vol.216
, pp. 36-46
-
-
Albers, S.C.1
Gallegos, V.A.2
Peebles, C.A.3
-
2
-
-
85006051893
-
Evaluating light-induced promoters for the control of heterologous gene expression in Synechocystis sp. PCC 6803
-
Albers SC, Peebles CA. 2016. Evaluating light-induced promoters for the control of heterologous gene expression in Synechocystis sp. PCC 6803. Biotechnol Prog 33:45–53.
-
(2016)
Biotechnol Prog
, vol.33
, pp. 45-53
-
-
Albers, S.C.1
Peebles, C.A.2
-
3
-
-
0035109507
-
Redox control of ntcA gene expression in Synechocystis sp. PCC 6803. Nitrogen availability and electron transport regulate the levels of the NtcA protein
-
Alfonso M, Perewoska I, Kirilovsky D. 2001. Redox control of ntcA gene expression in Synechocystis sp. PCC 6803. Nitrogen availability and electron transport regulate the levels of the NtcA protein. Plant Physiol 125(2):969–981.
-
(2001)
Plant Physiol
, vol.125
, Issue.2
, pp. 969-981
-
-
Alfonso, M.1
Perewoska, I.2
Kirilovsky, D.3
-
4
-
-
0021192471
-
Cyanobacterial cell inclusions
-
Allen MM. 1984. Cyanobacterial cell inclusions. Annu Rev Microbiol 38:1–25.
-
(1984)
Annu Rev Microbiol
, vol.38
, pp. 1-25
-
-
Allen, M.M.1
-
5
-
-
0014654782
-
Nitrogen chlorosis in blue-green algae
-
Allen MM, Smith AJ. 1969. Nitrogen chlorosis in blue-green algae. Arch Mikrobiol 69(2):114–120.
-
(1969)
Arch Mikrobiol
, vol.69
, Issue.2
, pp. 114-120
-
-
Allen, M.M.1
Smith, A.J.2
-
6
-
-
84929504676
-
Metabolic engineering of cyanobacteria for the synthesis of commodity products
-
Angermayr SA, Gorchs Rovira A, Hellingwerf KJ. 2015. Metabolic engineering of cyanobacteria for the synthesis of commodity products. Trends in Biotechnology 33(6):352–361.
-
(2015)
Trends in Biotechnology
, vol.33
, Issue.6
, pp. 352-361
-
-
Angermayr, S.A.1
Gorchs Rovira, A.2
Hellingwerf, K.J.3
-
7
-
-
46949110597
-
Setting the standard in synthetic biology
-
Arkin A. 2008. Setting the standard in synthetic biology. Nat Biotechnol 26(7):771–774.
-
(2008)
Nat Biotechnol
, vol.26
, Issue.7
, pp. 771-774
-
-
Arkin, A.1
-
8
-
-
79951569000
-
A response regulator Rre37 and an RNA polymerase sigma factor SigE represent two parallel pathways to activate sugar catabolism in a cyanobacterium Synechocystis sp. PCC 6803
-
Azuma M, Osanai T, Hirai MY, Tanaka K. 2011. A response regulator Rre37 and an RNA polymerase sigma factor SigE represent two parallel pathways to activate sugar catabolism in a cyanobacterium Synechocystis sp. PCC 6803. Plant Cell Physiol 52(2):404–412.
-
(2011)
Plant Cell Physiol
, vol.52
, Issue.2
, pp. 404-412
-
-
Azuma, M.1
Osanai, T.2
Hirai, M.Y.3
Tanaka, K.4
-
9
-
-
84884227283
-
Synthetic biology of cyanobacteria: Unique challenges and opportunities
-
Berla BM, Saha R, Immethun CM, Maranas CD, Moon TS, Pakrasi HB. 2013. Synthetic biology of cyanobacteria: Unique challenges and opportunities. Front Microbiol 4:246.
-
(2013)
Front Microbiol
, vol.4
, pp. 246
-
-
Berla, B.M.1
Saha, R.2
Immethun, C.M.3
Maranas, C.D.4
Moon, T.S.5
Pakrasi, H.B.6
-
10
-
-
84960798463
-
Tools and principles for microbial gene circuit engineering
-
Bradley RW, Buck M, Wang B. 2016. Tools and principles for microbial gene circuit engineering. J Mol Biol 428(5, Part B):862–888.
-
(2016)
J Mol Biol
, vol.428
, pp. 862-888
-
-
Bradley, R.W.1
Buck, M.2
Wang, B.3
-
11
-
-
55049127127
-
Optimization of media nutrient composition for increased photofermentative hydrogen production by Synechocystis sp. PCC 6803
-
Burrows EH, Chaplen FWR, Ely RL. 2008. Optimization of media nutrient composition for increased photofermentative hydrogen production by Synechocystis sp. PCC 6803. Int J Hydrogen Energy 33(21):6092–6099.
-
(2008)
Int J Hydrogen Energy
, vol.33
, Issue.21
, pp. 6092-6099
-
-
Burrows, E.H.1
Chaplen, F.W.R.2
Ely, R.L.3
-
12
-
-
84893846166
-
Design and analysis of LacI-repressed promoters and DNA-looping in a cyanobacterium
-
Camsund D, Heidorn T, Lindblad P. 2014. Design and analysis of LacI-repressed promoters and DNA-looping in a cyanobacterium. J Biol Eng 8(1):4.
-
(2014)
J Biol Eng
, vol.8
, Issue.1
, pp. 4
-
-
Camsund, D.1
Heidorn, T.2
Lindblad, P.3
-
13
-
-
84863322344
-
Contextualizing context for synthetic biology—Identifying causes of failure of synthetic biological systems
-
Cardinale S, Arkin AP. 2012. Contextualizing context for synthetic biology—Identifying causes of failure of synthetic biological systems. Biotechnol J 7(7):856–866.
-
(2012)
Biotechnol J
, vol.7
, Issue.7
, pp. 856-866
-
-
Cardinale, S.1
Arkin, A.P.2
-
14
-
-
84887618970
-
Advances in metabolic pathway and strain engineering paving the way for sustainable production of chemical building blocks
-
Chen Y, Nielsen J. 2013. Advances in metabolic pathway and strain engineering paving the way for sustainable production of chemical building blocks. Curr Opin Biotechnol 24(6):965–972.
-
(2013)
Curr Opin Biotechnol
, vol.24
, Issue.6
, pp. 965-972
-
-
Chen, Y.1
Nielsen, J.2
-
15
-
-
85028550972
-
Synthetic and systems biology for microbial production of commodity chemicals
-
Chubukov V, Mukhopadhyay A, Petzold CJ, Keasling JD, Martín HG. 2016. Synthetic and systems biology for microbial production of commodity chemicals. NPJ Syst Biol Appl 2:16009.
-
(2016)
NPJ Syst Biol Appl
, vol.2
, pp. 16009
-
-
Chubukov, V.1
Mukhopadhyay, A.2
Petzold, C.J.3
Keasling, J.D.4
Martín, H.G.5
-
16
-
-
80051704380
-
Engineering microbial factories for synthesis of value-added products
-
Du J, Shao Z, Zhao H. 2011. Engineering microbial factories for synthesis of value-added products. J Ind Microbiol Biotechnol 38(8):873–890.
-
(2011)
J Ind Microbiol Biotechnol
, vol.38
, Issue.8
, pp. 873-890
-
-
Du, J.1
Shao, Z.2
Zhao, H.3
-
17
-
-
78751638661
-
Engineering cyanobacteria to generate high-value products
-
Ducat DC, Way JC, Silver PA. 2011. Engineering cyanobacteria to generate high-value products. Trends Biotechnol 29(2):95–103.
-
(2011)
Trends Biotechnol
, vol.29
, Issue.2
, pp. 95-103
-
-
Ducat, D.C.1
Way, J.C.2
Silver, P.A.3
-
18
-
-
0021188333
-
An operator at −280 base pairs that is required for repression of araBAD operon promoter: Addition of DNA helical turns between the operator and promoter cyclically hinders repression
-
Dunn TM, Hahn S, Ogden S, Schleif RF. 1984. An operator at −280 base pairs that is required for repression of araBAD operon promoter: Addition of DNA helical turns between the operator and promoter cyclically hinders repression. Proc Natl Acad Sci USA 81(16):5017–5020.
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, Issue.16
, pp. 5017-5020
-
-
Dunn, T.M.1
Hahn, S.2
Ogden, S.3
Schleif, R.F.4
-
19
-
-
56649114274
-
A one pot, one step, precision cloning method with high throughput capability
-
Engler C, Kandzia R, Marillonnet S. 2008. A one pot, one step, precision cloning method with high throughput capability. PLoS ONE 3(11):e3647.
-
(2008)
PLoS ONE
, vol.3
, Issue.11
-
-
Engler, C.1
Kandzia, R.2
Marillonnet, S.3
-
20
-
-
33748509737
-
Interaction network in cyanobacterial nitrogen regulation: PipX, a protein that interacts in a 2-oxoglutarate dependent manner with PII and NtcA
-
Espinosa J, Forchhammer K, Burillo S, Contreras A. 2006. Interaction network in cyanobacterial nitrogen regulation: PipX, a protein that interacts in a 2-oxoglutarate dependent manner with PII and NtcA. Mol Microbiol 61(2):457–469.
-
(2006)
Mol Microbiol
, vol.61
, Issue.2
, pp. 457-469
-
-
Espinosa, J.1
Forchhammer, K.2
Burillo, S.3
Contreras, A.4
-
21
-
-
0034024497
-
Improving lycopene production in Escherichia coli by engineering metabolic control
-
Farmer WR, Liao JC. 2000. Improving lycopene production in Escherichia coli by engineering metabolic control. Nat Biotech 18(5):533–537.
-
(2000)
Nat Biotech
, vol.18
, Issue.5
, pp. 533-537
-
-
Farmer, W.R.1
Liao, J.C.2
-
22
-
-
84902657080
-
SPR analysis of promoter binding of Synechocystis PCC6803 transcription factors NtcA and CRP suggests cross-talk and sheds light on regulation by effector molecules
-
Forcada-Nadal A, Forchhammer K, Rubio V. 2014. SPR analysis of promoter binding of Synechocystis PCC6803 transcription factors NtcA and CRP suggests cross-talk and sheds light on regulation by effector molecules. FEBS Letters 588(14):2270–2276.
-
(2014)
FEBS Letters
, vol.588
, Issue.14
, pp. 2270-2276
-
-
Forcada-Nadal, A.1
Forchhammer, K.2
Rubio, V.3
-
23
-
-
0027329062
-
The phycobilisome, a light-harvesting complex responsive to environmental conditions
-
Grossman AR, Schaefer MR, Chiang GG, Collier JL. 1993. The phycobilisome, a light-harvesting complex responsive to environmental conditions. Microbiol Rev 57(3):725–749.
-
(1993)
Microbiol Rev
, vol.57
, Issue.3
, pp. 725-749
-
-
Grossman, A.R.1
Schaefer, M.R.2
Chiang, G.G.3
Collier, J.L.4
-
24
-
-
84893141463
-
The bidirectional NiFe-hydrogenase in Synechocystis sp. PCC 6803 is reduced by flavodoxin and ferredoxin and is essential under mixotrophic, nitrate-limiting conditions
-
Gutekunst K, Chen X, Schreiber K, Kaspar U, Makam S, Appel J. 2014. The bidirectional NiFe-hydrogenase in Synechocystis sp. PCC 6803 is reduced by flavodoxin and ferredoxin and is essential under mixotrophic, nitrate-limiting conditions. J Biol Chem 289(4):1930–1937.
-
(2014)
J Biol Chem
, vol.289
, Issue.4
, pp. 1930-1937
-
-
Gutekunst, K.1
Chen, X.2
Schreiber, K.3
Kaspar, U.4
Makam, S.5
Appel, J.6
-
25
-
-
33847137761
-
Inhibition of respiration and nitrate assimilation enhances photohydrogen evolution under low oxygen concentrations in Synechocystis sp. PCC 6803
-
Gutthann F, Egert M, Marques A, Appel J. 2007. Inhibition of respiration and nitrate assimilation enhances photohydrogen evolution under low oxygen concentrations in Synechocystis sp. PCC 6803. Biochim Biophys Acta 1767(2):161–169.
-
(2007)
Biochim Biophys Acta
, vol.1767
, Issue.2
, pp. 161-169
-
-
Gutthann, F.1
Egert, M.2
Marques, A.3
Appel, J.4
-
26
-
-
0020507217
-
In vivo regulation of the Escherichia coli araC promoter
-
Hahn S, Schleif R. 1983. In vivo regulation of the Escherichia coli araC promoter. J Bacteriol 155(2):593–600.
-
(1983)
J Bacteriol
, vol.155
, Issue.2
, pp. 593-600
-
-
Hahn, S.1
Schleif, R.2
-
27
-
-
0034108232
-
Regulation of biological nitrogen fixation
-
Halbleib CM, Ludden PW. 2000. Regulation of biological nitrogen fixation. J Nutr 130(5):1081–1084.
-
(2000)
J Nutr
, vol.130
, Issue.5
, pp. 1081-1084
-
-
Halbleib, C.M.1
Ludden, P.W.2
-
28
-
-
85019819422
-
-
San Diego, CA; Waltham, MA; London, Elsevier, Inc, p
-
Heidorn T, Camsund D, Huang H-H, Lindberg P, Oliveira P, Stensjo K, Lindblad P. 2011. Synthetic biology in cyanobacteria: Engineering and analyzing novel functions. San Diego, CA; Waltham, MA; London: Elsevier, Inc. p 678.
-
(2011)
Synthetic biology in cyanobacteria: Engineering and analyzing novel functions
, pp. 678
-
-
Heidorn, T.1
Camsund, D.2
Huang, H.-H.3
Lindberg, P.4
Oliveira, P.5
Stensjo, K.6
Lindblad, P.7
-
29
-
-
84905233926
-
Boosting D-lactate production in engineered cyanobacteria using sterilized anaerobic digestion effluents
-
Hollinshead WD, Varman AM, You L, Hembree Z, Tang YJJ. 2014. Boosting D-lactate production in engineered cyanobacteria using sterilized anaerobic digestion effluents. Bioresour Technol 169:462–467.
-
(2014)
Bioresour Technol
, vol.169
, pp. 462-467
-
-
Hollinshead, W.D.1
Varman, A.M.2
You, L.3
Hembree, Z.4
Tang, Y.J.J.5
-
30
-
-
84941271067
-
Programmable genetic circuits for pathway engineering
-
Hoynes-O'Connor A, Moon TS. 2015. Programmable genetic circuits for pathway engineering. Curr Opin Biotechnol 36:115–121.
-
(2015)
Curr Opin Biotechnol
, vol.36
, pp. 115-121
-
-
Hoynes-O'Connor, A.1
Moon, T.S.2
-
31
-
-
77952492062
-
Design and characterization of molecular tools for a synthetic biology approach towards developing cyanobacterial biotechnology
-
Huang HH, Camsund D, Lindblad P, Heidorn T. 2010. Design and characterization of molecular tools for a synthetic biology approach towards developing cyanobacterial biotechnology. Nucleic Acids Res 38(8):2577–2593.
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.8
, pp. 2577-2593
-
-
Huang, H.H.1
Camsund, D.2
Lindblad, P.3
Heidorn, T.4
-
32
-
-
84876709042
-
Wide-dynamic-range promoters engineered for cyanobacteria
-
Huang HH, Lindblad P. 2013. Wide-dynamic-range promoters engineered for cyanobacteria. J Biol Eng 7(1):10.
-
(2013)
J Biol Eng
, vol.7
, Issue.1
, pp. 10
-
-
Huang, H.H.1
Lindblad, P.2
-
33
-
-
84948395539
-
The emergence of 2-oxoglutarate as a master regulator metabolite
-
Huergo LF, Dixon R. 2015. The emergence of 2-oxoglutarate as a master regulator metabolite. Microbiol Mol Biol Rev 79(4):419–435.
-
(2015)
Microbiol Mol Biol Rev
, vol.79
, Issue.4
, pp. 419-435
-
-
Huergo, L.F.1
Dixon, R.2
-
34
-
-
77954211923
-
Sigma factors for cyanobacterial transcription
-
Imamura S, Asayama M. 2009. Sigma factors for cyanobacterial transcription. Gene Regul Syst Bio 3:65–87.
-
(2009)
Gene Regul Syst Bio
, vol.3
, pp. 65-87
-
-
Imamura, S.1
Asayama, M.2
-
36
-
-
84965098352
-
Oxygen-responsive genetic circuits constructed in Synechocystis sp. PCC 6803
-
Immethun CM, Ng KM, DeLorenzo DM, Waldron-Feinstein B, Lee YC, Moon TS. 2016. Oxygen-responsive genetic circuits constructed in Synechocystis sp. PCC 6803. Biotechnol Bioeng 113(2):433–442.
-
(2016)
Biotechnol Bioeng
, vol.113
, Issue.2
, pp. 433-442
-
-
Immethun, C.M.1
Ng, K.M.2
DeLorenzo, D.M.3
Waldron-Feinstein, B.4
Lee, Y.C.5
Moon, T.S.6
-
37
-
-
28544442417
-
Synthetic biology: Engineering Escherichia coli to see light
-
Levskaya A, Chevalier AA, Tabor JJ, Simpson ZB, Lavery LA, Levy M, Davidson EA, Scouras A, Ellington AD, Marcotte EM, Voigt CA. 2005. Synthetic biology: Engineering Escherichia coli to see light. Nature 438(7067):441–442.
-
(2005)
Nature
, vol.438
, Issue.7067
, pp. 441-442
-
-
Levskaya, A.1
Chevalier, A.A.2
Tabor, J.J.3
Simpson, Z.B.4
Lavery, L.A.5
Levy, M.6
Davidson, E.A.7
Scouras, A.8
Ellington, A.D.9
Marcotte, E.M.10
Voigt, C.A.11
-
38
-
-
70449336249
-
Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism
-
Lindberg P, Park S, Melis A. 2010. Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism. Metab Eng 12:70–79.
-
(2010)
Metab Eng
, vol.12
, pp. 70-79
-
-
Lindberg, P.1
Park, S.2
Melis, A.3
-
39
-
-
84893133905
-
The nitrogen-regulated response regulator NrrA controls cyanophycin synthesis and glycogen catabolism in the cyanobacterium Synechocystis sp. PCC 6803
-
Liu D, Yang C. 2014. The nitrogen-regulated response regulator NrrA controls cyanophycin synthesis and glycogen catabolism in the cyanobacterium Synechocystis sp. PCC 6803. J Biol Chem 289(4):2055–2071.
-
(2014)
J Biol Chem
, vol.289
, Issue.4
, pp. 2055-2071
-
-
Liu, D.1
Yang, C.2
-
40
-
-
84882604844
-
Microbial engineering strategies to improve cell viability for biochemical production
-
Lo T-M, Teo WS, Ling H, Chen B, Kang A, Chang MW. 2013. Microbial engineering strategies to improve cell viability for biochemical production. Biotechnol Adv 31(6):903–914.
-
(2013)
Biotechnol Adv
, vol.31
, Issue.6
, pp. 903-914
-
-
Lo, T.-M.1
Teo, W.S.2
Ling, H.3
Chen, B.4
Kang, A.5
Chang, M.W.6
-
41
-
-
0025202249
-
DNA looping and unlooping by AraC protein
-
Lobell RB, Schleif RF. 1990. DNA looping and unlooping by AraC protein. Science 250(4980):528–532.
-
(1990)
Science
, vol.250
, Issue.4980
, pp. 528-532
-
-
Lobell, R.B.1
Schleif, R.F.2
-
42
-
-
84937762197
-
Engineering biological systems toward a sustainable bioeconomy
-
Lopes MSG. 2015. Engineering biological systems toward a sustainable bioeconomy. J Ind Microbiol Biotechnol 42(6):813–838.
-
(2015)
J Ind Microbiol Biotechnol
, vol.42
, Issue.6
, pp. 813-838
-
-
Lopes, M.S.G.1
-
43
-
-
84869476328
-
Ribozyme-based insulator parts buffer synthetic circuits from genetic context
-
Lou C, Stanton B, Chen Y-J, Munsky B, Voigt CA. 2012. Ribozyme-based insulator parts buffer synthetic circuits from genetic context. Nat Biotech 30(11):1137–1142.
-
(2012)
Nat Biotech
, vol.30
, Issue.11
, pp. 1137-1142
-
-
Lou, C.1
Stanton, B.2
Chen, Y.-J.3
Munsky, B.4
Voigt, C.A.5
-
44
-
-
0028224920
-
Molecular mechanism for the operation of nitrogen control in cyanobacteria
-
Luque I, Flores E, Herrero A. 1994. Molecular mechanism for the operation of nitrogen control in cyanobacteria. EMBO J 13(12):2862–2869.
-
(1994)
EMBO J
, vol.13
, Issue.12
, pp. 2862-2869
-
-
Luque, I.1
Flores, E.2
Herrero, A.3
-
45
-
-
84929593888
-
Synthetic biology toolbox for controlling gene expression in the cyanobacterium Synechococcus sp. strain PCC 7002
-
Markley AL, Begemann MB, Clarke RE, Gordon GC, Pfleger BF. 2014. Synthetic biology toolbox for controlling gene expression in the cyanobacterium Synechococcus sp. strain PCC 7002. ACS Synth Biol 4(5):595–603.
-
(2014)
ACS Synth Biol
, vol.4
, Issue.5
, pp. 595-603
-
-
Markley, A.L.1
Begemann, M.B.2
Clarke, R.E.3
Gordon, G.C.4
Pfleger, B.F.5
-
46
-
-
7544245885
-
Biochemical characterization of the major adenylyl cyclase, Cya1, in the cyanobacterium Synechocystis sp. PCC 6803
-
Masuda S, Ono TA. 2004. Biochemical characterization of the major adenylyl cyclase, Cya1, in the cyanobacterium Synechocystis sp. PCC 6803. FEBS Lett 577(1–2):255–258.
-
(2004)
FEBS Lett
, vol.577
, Issue.1-2
, pp. 255-258
-
-
Masuda, S.1
Ono, T.A.2
-
47
-
-
0033759410
-
Sustained photobiological hydrogen gas production upon reversible inactivation of oxygen evolution in the green alga Chlamydomonas reinhardtii
-
Melis A, Zhang L, Forestier M, Ghirardi ML, Seibert M. 2000. Sustained photobiological hydrogen gas production upon reversible inactivation of oxygen evolution in the green alga Chlamydomonas reinhardtii. Plant Physiol 122(1):127–136.
-
(2000)
Plant Physiol
, vol.122
, Issue.1
, pp. 127-136
-
-
Melis, A.1
Zhang, L.2
Forestier, M.3
Ghirardi, M.L.4
Seibert, M.5
-
48
-
-
0021469101
-
Regulation of the araC gene of Escherichia coli: Catabolite repression, autoregulation, and effect on araBAD expression
-
Miyada CG, Stoltzfus L, Wilcox G. 1984. Regulation of the araC gene of Escherichia coli: Catabolite repression, autoregulation, and effect on araBAD expression. Proc Natl Acad Sci USA 81(13):4120–4124.
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, Issue.13
, pp. 4120-4124
-
-
Miyada, C.G.1
Stoltzfus, L.2
Wilcox, G.3
-
49
-
-
84899585805
-
A green-light inducible lytic system for cyanobacterial cells
-
Miyake K, Abe K, Ferri S, Nakajima M, Nakamura M, Yoshida W, Kojima K, Ikebukuro K, Sode K. 2014. A green-light inducible lytic system for cyanobacterial cells. Biotechnol Biofuels 7(1):1–8.
-
(2014)
Biotechnol Biofuels
, vol.7
, Issue.1
, pp. 1-8
-
-
Miyake, K.1
Abe, K.2
Ferri, S.3
Nakajima, M.4
Nakamura, M.5
Yoshida, W.6
Kojima, K.7
Ikebukuro, K.8
Sode, K.9
-
50
-
-
84868619337
-
Genetic programs constructed from layered logic gates in single cells
-
Moon TS, Lou C, Tamsir A, Stanton BC, Voigt CA. 2012. Genetic programs constructed from layered logic gates in single cells. Nature 491(7423):249–253.
-
(2012)
Nature
, vol.491
, Issue.7423
, pp. 249-253
-
-
Moon, T.S.1
Lou, C.2
Tamsir, A.3
Stanton, B.C.4
Voigt, C.A.5
-
51
-
-
84961727418
-
Identifying regulatory changes to facilitate nitrogen fixation in the nondiazotroph Synechocystis sp. PCC 6803
-
Mueller TJ, Welsh EA, Pakrasi HB, Maranas CD. 2016. Identifying regulatory changes to facilitate nitrogen fixation in the nondiazotroph Synechocystis sp. PCC 6803. ACS Synth Biol 5(3):250–258.
-
(2016)
ACS Synth Biol
, vol.5
, Issue.3
, pp. 250-258
-
-
Mueller, T.J.1
Welsh, E.A.2
Pakrasi, H.B.3
Maranas, C.D.4
-
52
-
-
84867666487
-
Directed evolution of bright mutants of an oxygen-independent flavin-binding fluorescent protein from Pseudomonas putida
-
Mukherjee A, Weyant KB, Walker J, Schroeder CM. 2012. Directed evolution of bright mutants of an oxygen-independent flavin-binding fluorescent protein from Pseudomonas putida. J Biol Eng 6(1):20.
-
(2012)
J Biol Eng
, vol.6
, Issue.1
, pp. 20
-
-
Mukherjee, A.1
Weyant, K.B.2
Walker, J.3
Schroeder, C.M.4
-
53
-
-
0035157654
-
Nitrogen-regulated group 2 sigma factor from Synechocystis sp. strain PCC 6803 involved in survival under nitrogen stress
-
Muro-Pastor AM, Herrero A, Flores E. 2001a. Nitrogen-regulated group 2 sigma factor from Synechocystis sp. strain PCC 6803 involved in survival under nitrogen stress. J Bacteriol 183(3):1090–1095.
-
(2001)
J Bacteriol
, vol.183
, Issue.3
, pp. 1090-1095
-
-
Muro-Pastor, A.M.1
Herrero, A.2
Flores, E.3
-
54
-
-
8944221191
-
The NADP +-isocitrate dehydrogenase gene (icd) is nitrogen regulated in cyanobacteria
-
Muro-Pastor MI, Reyes JC, Florencio FJ. 1996. The NADP +-isocitrate dehydrogenase gene (icd) is nitrogen regulated in cyanobacteria. J Bacteriol 178(14):4070–4076.
-
(1996)
J Bacteriol
, vol.178
, Issue.14
, pp. 4070-4076
-
-
Muro-Pastor, M.I.1
Reyes, J.C.2
Florencio, F.J.3
-
55
-
-
0035851149
-
Cyanobacteria perceive nitrogen status by sensing intracellular 2-oxoglutarate levels
-
Muro-Pastor MI, Reyes JC, Florencio FJ. 2001b. Cyanobacteria perceive nitrogen status by sensing intracellular 2-oxoglutarate levels. J Biol Chem 276(41):38320–38328.
-
(2001)
J Biol Chem
, vol.276
, Issue.41
, pp. 38320-38328
-
-
Muro-Pastor, M.I.1
Reyes, J.C.2
Florencio, F.J.3
-
56
-
-
84940783269
-
Fine-tuning of photoautotrophic protein production by combining promoters and neutral sites in the cyanobacterium Synechocystis sp. strain PCC 6803
-
Ng AH, Berla BM, Pakrasi HB. 2015. Fine-tuning of photoautotrophic protein production by combining promoters and neutral sites in the cyanobacterium Synechocystis sp. strain PCC 6803. Appl Environ Microbiol 81(19):6857–6863.
-
(2015)
Appl Environ Microbiol
, vol.81
, Issue.19
, pp. 6857-6863
-
-
Ng, A.H.1
Berla, B.M.2
Pakrasi, H.B.3
-
57
-
-
84942454433
-
Genome engineering of the 2,3-butanediol biosynthetic pathway for tight regulation in cyanobacteria
-
Nozzi NE, Atsumi S. 2015. Genome engineering of the 2,3-butanediol biosynthetic pathway for tight regulation in cyanobacteria. ACS Synth Biol 4(11):1197–1204.
-
(2015)
ACS Synth Biol
, vol.4
, Issue.11
, pp. 1197-1204
-
-
Nozzi, N.E.1
Atsumi, S.2
-
59
-
-
84963954452
-
Effects of bleaching by nitrogen deficiency on the quantum yield of photosystem II in Synechocystis sp. PCC 6803 revealed by Chl fluorescence measurements
-
Ogawa T, Sonoike K. 2016. Effects of bleaching by nitrogen deficiency on the quantum yield of photosystem II in Synechocystis sp. PCC 6803 revealed by Chl fluorescence measurements. Plant Cell Physiol 57(3):558–567.
-
(2016)
Plant Cell Physiol
, vol.57
, Issue.3
, pp. 558-567
-
-
Ogawa, T.1
Sonoike, K.2
-
60
-
-
84901846248
-
Metabolic design for cyanobacterial chemical synthesis
-
Oliver JWK, Atsumi S. 2014. Metabolic design for cyanobacterial chemical synthesis. Photosynth Res 120(3):249–261.
-
(2014)
Photosynth Res
, vol.120
, Issue.3
, pp. 249-261
-
-
Oliver, J.W.K.1
Atsumi, S.2
-
61
-
-
84897954571
-
Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals
-
Olson EJ, Hartsough LA, Landry BP, Shroff R, Tabor JJ. 2014. Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals. Nat Methods 11(4):449–455.
-
(2014)
Nat Methods
, vol.11
, Issue.4
, pp. 449-455
-
-
Olson, E.J.1
Hartsough, L.A.2
Landry, B.P.3
Shroff, R.4
Tabor, J.J.5
-
62
-
-
33845866349
-
Nitrogen induction of sugar catabolic gene expression in Synechocystis sp. PCC 6803
-
Osanai T, Imamura S, Asayama M, Shirai M, Suzuki I, Murata N, Tanaka K. 2006. Nitrogen induction of sugar catabolic gene expression in Synechocystis sp. PCC 6803. DNA Res 13(5):185–195.
-
(2006)
DNA Res
, vol.13
, Issue.5
, pp. 185-195
-
-
Osanai, T.1
Imamura, S.2
Asayama, M.3
Shirai, M.4
Suzuki, I.5
Murata, N.6
Tanaka, K.7
-
63
-
-
84922024536
-
Salt acclimation of cyanobacteria and their application in biotechnology
-
Pade N, Hagemann M. 2015. Salt acclimation of cyanobacteria and their application in biotechnology. Life 5(1):25–49.
-
(2015)
Life
, vol.5
, Issue.1
, pp. 25-49
-
-
Pade, N.1
Hagemann, M.2
-
64
-
-
84865142847
-
Microbial engineering for the production of advanced biofuels
-
Peralta-Yahya PP, Zhang F, Del Cardayre SB, Keasling JD. 2012. Microbial engineering for the production of advanced biofuels. Nature 488(7411):320–328.
-
(2012)
Nature
, vol.488
, Issue.7411
, pp. 320-328
-
-
Peralta-Yahya, P.P.1
Zhang, F.2
Del Cardayre, S.B.3
Keasling, J.D.4
-
65
-
-
0030027864
-
Transcription of the Anabaena sp. strain PCC 7120 ntcA gene: Multiple transcripts and NtcA binding
-
Ramasubramanian TS, Wei TF, Oldham AK, Golden JW. 1996. Transcription of the Anabaena sp. strain PCC 7120 ntcA gene: Multiple transcripts and NtcA binding. J Bacteriol 178(3):922–926.
-
(1996)
J Bacteriol
, vol.178
, Issue.3
, pp. 922-926
-
-
Ramasubramanian, T.S.1
Wei, T.F.2
Oldham, A.K.3
Golden, J.W.4
-
66
-
-
84947983632
-
Genome engineering in cyanobacteria: Where we are and where we need to go
-
Ramey CJ, Barón-Sola Á, Aucoin HR, Boyle NR. 2015. Genome engineering in cyanobacteria: Where we are and where we need to go. ACS Synth Biol 4(11):1186–1196.
-
(2015)
ACS Synth Biol
, vol.4
, Issue.11
, pp. 1186-1196
-
-
Ramey, C.J.1
Barón-Sola, Á.2
Aucoin, H.R.3
Boyle, N.R.4
-
67
-
-
0030938836
-
Transcription of glutamine synthetase genes (glnA and glnN) from the cyanobacterium Synechocystis sp. strain PCC 6803 is differently regulated in response to nitrogen availability
-
Reyes JC, Muro-Pastor MI, Florencio FJ. 1997. Transcription of glutamine synthetase genes (glnA and glnN) from the cyanobacterium Synechocystis sp. strain PCC 6803 is differently regulated in response to nitrogen availability. J Bacteriol 179(8):2678–2689.
-
(1997)
J Bacteriol
, vol.179
, Issue.8
, pp. 2678-2689
-
-
Reyes, J.C.1
Muro-Pastor, M.I.2
Florencio, F.J.3
-
68
-
-
84899679316
-
Recombinant protein expression in Escherichia coli: Advances and challenges
-
Rosano GL, Ceccarelli EA. 2014. Recombinant protein expression in Escherichia coli: Advances and challenges. Front Microbiol 5:172.
-
(2014)
Front Microbiol
, vol.5
, pp. 172
-
-
Rosano, G.L.1
Ceccarelli, E.A.2
-
69
-
-
84978971791
-
Diurnal regulation of cellular processes in the cyanobacterium Synechocystis sp. strain PCC 6803: Insights from transcriptomic, fluxomic, and physiological analyses
-
Saha R, Liu D, Hoynes-O'Connor A, Liberton M, Yu J, Bhattacharyya-Pakrasi M, Balassy A, Zhang F, Moon TS, Maranas CD, Pakrasi HB. 2016. Diurnal regulation of cellular processes in the cyanobacterium Synechocystis sp. strain PCC 6803: Insights from transcriptomic, fluxomic, and physiological analyses. MBio 7(3):e00464–e00516.
-
(2016)
MBio
, vol.7
, Issue.3
, pp. e00464-e00516
-
-
Saha, R.1
Liu, D.2
Hoynes-O'Connor, A.3
Liberton, M.4
Yu, J.5
Bhattacharyya-Pakrasi, M.6
Balassy, A.7
Zhang, F.8
Moon, T.S.9
Maranas, C.D.10
Pakrasi, H.B.11
-
70
-
-
33645115445
-
Expression of highly toxic genes in E. coli: Special strategies and genetic tools
-
Saida F, Uzan M, Odaert B, Bontems F. 2006. Expression of highly toxic genes in E. coli: Special strategies and genetic tools. Curr Protein Pept Sci 7(1):47–56.
-
(2006)
Curr Protein Pept Sci
, vol.7
, Issue.1
, pp. 47-56
-
-
Saida, F.1
Uzan, M.2
Odaert, B.3
Bontems, F.4
-
71
-
-
0031829153
-
DNA bending by AraC: A negative mutant
-
Saviola B, Seabold RR, Schleif RF. 1998. DNA bending by AraC: A negative mutant. J Bacteriol 180(16):4227–4232.
-
(1998)
J Bacteriol
, vol.180
, Issue.16
, pp. 4227-4232
-
-
Saviola, B.1
Seabold, R.R.2
Schleif, R.F.3
-
72
-
-
77955132053
-
AraC protein, regulation of the l-arabinose operon in Escherichia coli, and the light switch mechanism of AraC action
-
Schleif R. 2010. AraC protein, regulation of the l-arabinose operon in Escherichia coli, and the light switch mechanism of AraC action. FEMS Microbiol Rev 34(5):779–796.
-
(2010)
FEMS Microbiol Rev
, vol.34
, Issue.5
, pp. 779-796
-
-
Schleif, R.1
-
73
-
-
43149121113
-
Global transcriptomic analysis of Cyanothece 51142 reveals robust diurnal oscillation of central metabolic processes
-
Stockel J, Welsh EA, Liberton M, Kunnvakkam R, Aurora R, Pakrasi HB. 2008. Global transcriptomic analysis of Cyanothece 51142 reveals robust diurnal oscillation of central metabolic processes. Proc Natl Acad Sci USA 105(16):6156–6161.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.16
, pp. 6156-6161
-
-
Stockel, J.1
Welsh, E.A.2
Liberton, M.3
Kunnvakkam, R.4
Aurora, R.5
Pakrasi, H.B.6
-
74
-
-
25144464549
-
Comparative genomics analysis of NtcA regulons in cyanobacteria: Regulation of nitrogen assimilation and its coupling to photosynthesis
-
Su Z, Olman V, Mao F, Xu Y. 2005. Comparative genomics analysis of NtcA regulons in cyanobacteria: Regulation of nitrogen assimilation and its coupling to photosynthesis. Nucleic Acids Res 33(16):5156–5171.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.16
, pp. 5156-5171
-
-
Su, Z.1
Olman, V.2
Mao, F.3
Xu, Y.4
-
75
-
-
1942519865
-
Blue light stimulates cyanobacterial motility via a cAMP signal transduction system
-
Terauchi K, Ohmori M. 2004. Blue light stimulates cyanobacterial motility via a cAMP signal transduction system. Mol Microbiol 52(1):303–309.
-
(2004)
Mol Microbiol
, vol.52
, Issue.1
, pp. 303-309
-
-
Terauchi, K.1
Ohmori, M.2
-
76
-
-
84873812835
-
Metabolic engineering of Synechocystis sp. strain PCC 6803 for isobutanol production
-
Varman AM, Xiao Y, Pakrasi HB, Tang YJ. 2013. Metabolic engineering of Synechocystis sp. strain PCC 6803 for isobutanol production. Appl Environ Microbiol 79(3):908–914.
-
(2013)
Appl Environ Microbiol
, vol.79
, Issue.3
, pp. 908-914
-
-
Varman, A.M.1
Xiao, Y.2
Pakrasi, H.B.3
Tang, Y.J.4
-
78
-
-
84924370996
-
Mechanistic links between cellular trade-offs, gene expression, and growth
-
Weisse AY, Oyarzun DA, Danos V, Swain PS. 2015. Mechanistic links between cellular trade-offs, gene expression, and growth. Proc Natl Acad Sci USA 112(9):E1038–E1047.
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, Issue.9
, pp. E1038-E1047
-
-
Weisse, A.Y.1
Oyarzun, D.A.2
Danos, V.3
Swain, P.S.4
-
80
-
-
84877103996
-
Integrated transcriptomic and metabolomic analysis of the central metabolism of Synechocystis sp. PCC 6803 under different trophic conditions
-
Yoshikawa K, Hirasawa T, Ogawa K, Hidaka Y, Nakajima T, Furusawa C, Shimizu H. 2013. Integrated transcriptomic and metabolomic analysis of the central metabolism of Synechocystis sp. PCC 6803 under different trophic conditions. Biotechnol J 8(5):571–580.
-
(2013)
Biotechnol J
, vol.8
, Issue.5
, pp. 571-580
-
-
Yoshikawa, K.1
Hirasawa, T.2
Ogawa, K.3
Hidaka, Y.4
Nakajima, T.5
Furusawa, C.6
Shimizu, H.7
-
81
-
-
0036230640
-
Screening for the target gene of cyanobacterial cAMP receptor protein SYCRP1
-
Yoshimura H, Yanagisawa S, Kanehisa M, Ohmori M. 2002. Screening for the target gene of cyanobacterial cAMP receptor protein SYCRP1. Mol Microbiol 43(4):843–853.
-
(2002)
Mol Microbiol
, vol.43
, Issue.4
, pp. 843-853
-
-
Yoshimura, H.1
Yanagisawa, S.2
Kanehisa, M.3
Ohmori, M.4
-
82
-
-
84965157479
-
Construction of new synthetic biology tools for the control of gene expression in the cyanobacterium Synechococcus sp. strain PCC 7002
-
Zess EK, Begemann MB, Pfleger BF. 2016. Construction of new synthetic biology tools for the control of gene expression in the cyanobacterium Synechococcus sp. strain PCC 7002. Biotechnol Bioeng 113(2):424–432.
-
(2016)
Biotechnol Bioeng
, vol.113
, Issue.2
, pp. 424-432
-
-
Zess, E.K.1
Begemann, M.B.2
Pfleger, B.F.3
-
83
-
-
84859633048
-
Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids
-
Zhang F, Carothers JM, Keasling JD. 2012. Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids. Nat Biotechnol 30(4):354–359.
-
(2012)
Nat Biotechnol
, vol.30
, Issue.4
, pp. 354-359
-
-
Zhang, F.1
Carothers, J.M.2
Keasling, J.D.3
|