-
1
-
-
78751638661
-
Engineering cyanobacteria to generate high-value products
-
10.1016/j.tibtech.2010.12.003, 21211860
-
Ducat DC, Way JC, Silver PA. Engineering cyanobacteria to generate high-value products. Trends Biotechnol 2011, 29:95-103. 10.1016/j.tibtech.2010.12.003, 21211860.
-
(2011)
Trends Biotechnol
, vol.29
, pp. 95-103
-
-
Ducat, D.C.1
Way, J.C.2
Silver, P.A.3
-
2
-
-
84863509572
-
Design, engineering, and construction of photosynthetic microbial cell factories for renewable solar fuel production
-
10.1007/s13280-012-0274-5, 3357766, 22434446
-
Lindblad P, Lindberg P, Oliveira P, Stensjö K, Heidorn T. Design, engineering, and construction of photosynthetic microbial cell factories for renewable solar fuel production. Ambio 2012, 41:163-168. 10.1007/s13280-012-0274-5, 3357766, 22434446.
-
(2012)
Ambio
, vol.41
, pp. 163-168
-
-
Lindblad, P.1
Lindberg, P.2
Oliveira, P.3
Stensjö, K.4
Heidorn, T.5
-
3
-
-
84859772410
-
Synthetic biology and the development of tools for metabolic engineering
-
10.1016/j.ymben.2012.01.004, 22314049
-
Keasling JD. Synthetic biology and the development of tools for metabolic engineering. Metab Eng 2012, 14:189-195. 10.1016/j.ymben.2012.01.004, 22314049.
-
(2012)
Metab Eng
, vol.14
, pp. 189-195
-
-
Keasling, J.D.1
-
4
-
-
79957498811
-
Synthetic biology in cyanobacteria engineering and analyzing novel functions
-
Heidorn T, Camsund D, Huang HH, Lindberg P, Oliveira P, Stensjö K, Lindblad P. Synthetic biology in cyanobacteria engineering and analyzing novel functions. Methods Enzymol 2011, 497:539-579.
-
(2011)
Methods Enzymol
, vol.497
, pp. 539-579
-
-
Heidorn, T.1
Camsund, D.2
Huang, H.H.3
Lindberg, P.4
Oliveira, P.5
Stensjö, K.6
Lindblad, P.7
-
5
-
-
84876709042
-
Wide-dynamic-range promoters engineered for cyanobacteria
-
10.1186/1754-1611-7-10, 3724501, 23607865
-
Huang HH, Lindblad P. Wide-dynamic-range promoters engineered for cyanobacteria. J Biol Eng 2013, 7:10. 10.1186/1754-1611-7-10, 3724501, 23607865.
-
(2013)
J Biol Eng
, vol.7
, pp. 10
-
-
Huang, H.H.1
Lindblad, P.2
-
6
-
-
84863322344
-
Contextualizing context for synthetic biology - identifying causes of failure of synthetic biological systems
-
10.1002/biot.201200085, 3440575, 22649052
-
Cardinale S, Arkin AP. Contextualizing context for synthetic biology - identifying causes of failure of synthetic biological systems. Biotechnol J 2012, 7:856-866. 10.1002/biot.201200085, 3440575, 22649052.
-
(2012)
Biotechnol J
, vol.7
, pp. 856-866
-
-
Cardinale, S.1
Arkin, A.P.2
-
7
-
-
84858604873
-
Expanding the synthetic biology toolbox: engineering orthogonal regulators of gene expression
-
10.1016/j.copbio.2011.12.015, 22237017
-
Rao CV. Expanding the synthetic biology toolbox: engineering orthogonal regulators of gene expression. Curr Opin Biotechnol 2012, 23:689-694. 10.1016/j.copbio.2011.12.015, 22237017.
-
(2012)
Curr Opin Biotechnol
, vol.23
, pp. 689-694
-
-
Rao, C.V.1
-
8
-
-
84873027191
-
Application of synthetic biology in cyanobacteria and algae
-
3446811, 23049529
-
Wang B, Wang J, Zhang W, Meldrum DR. Application of synthetic biology in cyanobacteria and algae. Front Microbiol 2012, 3:344. 3446811, 23049529.
-
(2012)
Front Microbiol
, vol.3
, pp. 344
-
-
Wang, B.1
Wang, J.2
Zhang, W.3
Meldrum, D.R.4
-
9
-
-
0000727349
-
Isolation of the lac repressor
-
10.1073/pnas.56.6.1891, 220206, 16591435
-
Gilbert W, Müller-Hill B. Isolation of the lac repressor. Proc Natl Acad Sci USA 1966, 56:1891-1898. 10.1073/pnas.56.6.1891, 220206, 16591435.
-
(1966)
Proc Natl Acad Sci USA
, vol.56
, pp. 1891-1898
-
-
Gilbert, W.1
Müller-Hill, B.2
-
10
-
-
20444411150
-
The lac repressor
-
10.1016/j.crvi.2005.04.004, 15950160
-
Lewis M. The lac repressor. C R Biol 2005, 328:521-548. 10.1016/j.crvi.2005.04.004, 15950160.
-
(2005)
C R Biol
, vol.328
, pp. 521-548
-
-
Lewis, M.1
-
11
-
-
0016745534
-
Interaction of effecting ligands with lac repressor and repressor-operator complex
-
Barkley MD, Riggs AD, Jobe A, Burgeois S. Interaction of effecting ligands with lac repressor and repressor-operator complex. Biochemistry (Mosc) 1975, 14:1700-1712.
-
(1975)
Biochemistry (Mosc)
, vol.14
, pp. 1700-1712
-
-
Barkley, M.D.1
Riggs, A.D.2
Jobe, A.3
Burgeois, S.4
-
12
-
-
0342687610
-
A perfectly symmetric lac operator binds the lac repressor very tightly
-
10.1073/pnas.80.22.6785, 390070, 6316325
-
Sadler JR, Sasmor H, Betz JL. A perfectly symmetric lac operator binds the lac repressor very tightly. Proc Natl Acad Sci U S A 1983, 80:6785-6789. 10.1073/pnas.80.22.6785, 390070, 6316325.
-
(1983)
Proc Natl Acad Sci U S A
, vol.80
, pp. 6785-6789
-
-
Sadler, J.R.1
Sasmor, H.2
Betz, J.L.3
-
13
-
-
0028365289
-
Quality and position of the three lac operators of E. coli define efficiency of repression
-
395232, 8045263
-
Oehler S, Amouyal M, Kolkhof P, Von Wilcken-Bergmann B, Muller-Hill B. Quality and position of the three lac operators of E. coli define efficiency of repression. EMBO J 1994, 13:3348-3355. 395232, 8045263.
-
(1994)
EMBO J
, vol.13
, pp. 3348-3355
-
-
Oehler, S.1
Amouyal, M.2
Kolkhof, P.3
Von Wilcken-Bergmann, B.4
Muller-Hill, B.5
-
14
-
-
0022529619
-
Upstream operators enhance repression of the lac promoter
-
10.1126/science.3090685, 3090685
-
Mossing MC, Record MT. Upstream operators enhance repression of the lac promoter. Science 1986, 233:889-892. 10.1126/science.3090685, 3090685.
-
(1986)
Science
, vol.233
, pp. 889-892
-
-
Mossing, M.C.1
Record, M.T.2
-
15
-
-
0023333893
-
Lac repressor forms loops with linear DNA carrying two suitably spaced lac operators
-
553955, 3301328
-
Krämer H, Niemoller M, Amouyal M, Revet B, Von Wilcken-Bergmann B, Muller-Hill B. lac repressor forms loops with linear DNA carrying two suitably spaced lac operators. EMBO J 1987, 6:1481-1491. 553955, 3301328.
-
(1987)
EMBO J
, vol.6
, pp. 1481-1491
-
-
Krämer, H.1
Niemoller, M.2
Amouyal, M.3
Revet, B.4
Von Wilcken-Bergmann, B.5
Muller-Hill, B.6
-
16
-
-
0024300816
-
Physical properties of DNA in vivo as probed by the length pependence of the lac operator looping process
-
Bellomy GR, Mossing MC, Record MT. Physical properties of DNA in vivo as probed by the length pependence of the lac operator looping process. Biochemistry (Mosc) 1988, 27:3900-3906.
-
(1988)
Biochemistry (Mosc)
, vol.27
, pp. 3900-3906
-
-
Bellomy, G.R.1
Mossing, M.C.2
Record, M.T.3
-
17
-
-
0025343547
-
The three operators of the lac operon cooperate in repression
-
551766, 2182324
-
Oehler S, Eismann ER, Kramer H, Muller-Hill B. The three operators of the lac operon cooperate in repression. EMBO J 1990, 9:973-979. 551766, 2182324.
-
(1990)
EMBO J
, vol.9
, pp. 973-979
-
-
Oehler, S.1
Eismann, E.R.2
Kramer, H.3
Muller-Hill, B.4
-
18
-
-
0027510369
-
In vivo thermodynamic analysis of repression with and without looping in lac constructs: estimates of free and local lac repressor concentrations and of physical properties of a region of supercoiled plasmid DNA in vivo
-
10.1006/jmbi.1993.1133, 8450533
-
Law SM, Bellomy GR, Schlax PJ, Record MT. In vivo thermodynamic analysis of repression with and without looping in lac constructs: estimates of free and local lac repressor concentrations and of physical properties of a region of supercoiled plasmid DNA in vivo. J Mol Biol 1993, 230:161-173. 10.1006/jmbi.1993.1133, 8450533.
-
(1993)
J Mol Biol
, vol.230
, pp. 161-173
-
-
Law, S.M.1
Bellomy, G.R.2
Schlax, P.J.3
Record, M.T.4
-
19
-
-
84864318077
-
Operator sequence alters gene expression independently of transcription factor occupancy in bacteria
-
10.1016/j.celrep.2012.06.004, 3616187, 22840405
-
Garcia HG, Sanchez A, Boedicker JQ, Osborne M, Gelles J, Kondev J, Phillips R. Operator sequence alters gene expression independently of transcription factor occupancy in bacteria. Cell Reports 2012, 2:150-161. 10.1016/j.celrep.2012.06.004, 3616187, 22840405.
-
(2012)
Cell Reports
, vol.2
, pp. 150-161
-
-
Garcia, H.G.1
Sanchez, A.2
Boedicker, J.Q.3
Osborne, M.4
Gelles, J.5
Kondev, J.6
Phillips, R.7
-
20
-
-
78650435917
-
Gene repression by minimal lac loops in vivo
-
10.1093/nar/gkq755, 3001091, 21149272
-
Bond LM, Peters JP, Becker NA, Kahn JD, Maher LJ. Gene repression by minimal lac loops in vivo. Nucleic Acids Res 2010, 38:8072-8082. 10.1093/nar/gkq755, 3001091, 21149272.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 8072-8082
-
-
Bond, L.M.1
Peters, J.P.2
Becker, N.A.3
Kahn, J.D.4
Maher, L.J.5
-
21
-
-
0009699824
-
In vivo DNA loops in araCBAD: size limits and helical repeat
-
10.1073/pnas.86.2.476, 286493, 2643114
-
Lee DH, Schleif RF. In vivo DNA loops in araCBAD: size limits and helical repeat. Proc Natl Acad Sci USA 1989, 86:476-480. 10.1073/pnas.86.2.476, 286493, 2643114.
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 476-480
-
-
Lee, D.H.1
Schleif, R.F.2
-
22
-
-
34547852967
-
Analysis of In-Vivo LacR-Mediated Gene Repression Based on the Mechanics of DNA Looping
-
10.1371/journal.pone.0000136, 1762422, 17205140
-
Zhang Y, McEwen AE, Crothers DM, Levene SD. Analysis of In-Vivo LacR-Mediated Gene Repression Based on the Mechanics of DNA Looping. PLoS One 2006, 1:e136. 10.1371/journal.pone.0000136, 1762422, 17205140.
-
(2006)
PLoS One
, vol.1
-
-
Zhang, Y.1
McEwen, A.E.2
Crothers, D.M.3
Levene, S.D.4
-
23
-
-
0029975889
-
Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator
-
10.1006/jmbi.1996.0143, 8632456
-
Müller J, Oehler S, Müller-Hill B. Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator. J Mol Biol 1996, 257:21-29. 10.1006/jmbi.1996.0143, 8632456.
-
(1996)
J Mol Biol
, vol.257
, pp. 21-29
-
-
Müller, J.1
Oehler, S.2
Müller-Hill, B.3
-
24
-
-
0021923607
-
Spacing of the-10 and-35 regions in the tac promoter-effect on its in vivo activity
-
Brosius J, Erfle M, Storella J. Spacing of the-10 and-35 regions in the tac promoter-effect on its in vivo activity. J Biol Chem 1985, 260:3539-3541.
-
(1985)
J Biol Chem
, vol.260
, pp. 3539-3541
-
-
Brosius, J.1
Erfle, M.2
Storella, J.3
-
25
-
-
77952492062
-
Design and characterization of molecular tools for a synthetic biology approach towards developing cyanobacterial biotechnology
-
10.1093/nar/gkq164, 2860132, 20236988
-
Huang HH, Camsund D, Lindblad P, Heidorn T. Design and characterization of molecular tools for a synthetic biology approach towards developing cyanobacterial biotechnology. Nucleic Acids Res 2010, 38:2577-2593. 10.1093/nar/gkq164, 2860132, 20236988.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 2577-2593
-
-
Huang, H.H.1
Camsund, D.2
Lindblad, P.3
Heidorn, T.4
-
26
-
-
77954211923
-
Sigma factors for cyanobacterial transcription
-
Imamura S, Asayama M. Sigma factors for cyanobacterial transcription. Gene Regul Syst Biol 2009, 3:65-87.
-
(2009)
Gene Regul Syst Biol
, vol.3
, pp. 65-87
-
-
Imamura, S.1
Asayama, M.2
-
27
-
-
0029062674
-
Inducible expression of heterologous genes targeted to a chromosomal platform in the cyanobacterium Synechococcus sp. PCC 7942
-
Geerts D, Bovy A, De Vrieze G, Borrias M, Weisbeek P. Inducible expression of heterologous genes targeted to a chromosomal platform in the cyanobacterium Synechococcus sp. PCC 7942. Microbiology 1995, 141(Pt 4):831-841.
-
(1995)
Microbiology
, vol.141
, Issue.PART 4
, pp. 831-841
-
-
Geerts, D.1
Bovy, A.2
De Vrieze, G.3
Borrias, M.4
Weisbeek, P.5
-
28
-
-
84869812481
-
Ethylene synthesis and regulated expression of recombinant protein in Synechocystis sp. PCC 6803
-
10.1371/journal.pone.0050470, 3503970, 23185630
-
Guerrero F, Carbonell V, Cossu M, Correddu D, Jones PR. Ethylene synthesis and regulated expression of recombinant protein in Synechocystis sp. PCC 6803. PLoS One 2012, 7:e50470. 10.1371/journal.pone.0050470, 3503970, 23185630.
-
(2012)
PLoS One
, vol.7
-
-
Guerrero, F.1
Carbonell, V.2
Cossu, M.3
Correddu, D.4
Jones, P.R.5
-
29
-
-
0020649604
-
The tac promoter: a functional hybrid derived from the trp and lac promoters
-
10.1073/pnas.80.1.21, 393301, 6337371
-
de Boer HA, Comstock LJ, Vasser M. The tac promoter: a functional hybrid derived from the trp and lac promoters. Proc Natl Acad Sci USA 1983, 80:21-25. 10.1073/pnas.80.1.21, 393301, 6337371.
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 21-25
-
-
de Boer, H.A.1
Comstock, L.J.2
Vasser, M.3
-
30
-
-
0027373083
-
Strong and regulated promoters in the cyanobacterium Anabaena PCC 7120
-
10.1111/j.1574-6968.1993.tb06570.x, 8282186
-
Elhai J. Strong and regulated promoters in the cyanobacterium Anabaena PCC 7120. FEMS Microbiol Lett 1993, 114:179-184. 10.1111/j.1574-6968.1993.tb06570.x, 8282186.
-
(1993)
FEMS Microbiol Lett
, vol.114
, pp. 179-184
-
-
Elhai, J.1
-
31
-
-
0024076741
-
RNA-polymerase subunit homology among cyanobacteria, other eubacteria, and archaebacteria
-
211419, 3137214
-
Schneider GJ, Haselkorn R. RNA-polymerase subunit homology among cyanobacteria, other eubacteria, and archaebacteria. J Bacteriol 1988, 170:4136-4140. 211419, 3137214.
-
(1988)
J Bacteriol
, vol.170
, pp. 4136-4140
-
-
Schneider, G.J.1
Haselkorn, R.2
-
32
-
-
0024559774
-
Cyanobacterial RNA-Polymerase Genes rpoc1 and rpoc2 Correspond to rpoc of Escherichia coli
-
209846, 2495268
-
Xie WQ, Jager K, Potts M. Cyanobacterial RNA-Polymerase Genes rpoc1 and rpoc2 Correspond to rpoc of Escherichia coli. J Bacteriol 1989, 171:1967-1973. 209846, 2495268.
-
(1989)
J Bacteriol
, vol.171
, pp. 1967-1973
-
-
Xie, W.Q.1
Jager, K.2
Potts, M.3
-
33
-
-
33645233666
-
Regulatory system for light-responsive gene expression in photosynthesizing bacteria: cis-elements and trans-acting factors in transcription and post-transcription
-
10.1271/bbb.70.565, 16556970
-
Asayama M. Regulatory system for light-responsive gene expression in photosynthesizing bacteria: cis-elements and trans-acting factors in transcription and post-transcription. Biosci Biotechnol Biochem 2006, 70:565-573. 10.1271/bbb.70.565, 16556970.
-
(2006)
Biosci Biotechnol Biochem
, vol.70
, pp. 565-573
-
-
Asayama, M.1
-
35
-
-
80052898017
-
Ploidy in cyanobacteria
-
10.1111/j.1574-6968.2011.02368.x, 22092711
-
Griese M, Lange C, Soppa J. Ploidy in cyanobacteria. FEMS Microbiol Lett 2011, 323:124-131. 10.1111/j.1574-6968.2011.02368.x, 22092711.
-
(2011)
FEMS Microbiol Lett
, vol.323
, pp. 124-131
-
-
Griese, M.1
Lange, C.2
Soppa, J.3
-
36
-
-
0030861452
-
Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I-1-I-2 regulatory elements
-
10.1093/nar/25.6.1203, 146584, 9092630
-
Lutz R, Bujard H. Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I-1-I-2 regulatory elements. Nucleic Acids Res 1997, 25:1203-1210. 10.1093/nar/25.6.1203, 146584, 9092630.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 1203-1210
-
-
Lutz, R.1
Bujard, H.2
-
37
-
-
79952174199
-
An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp PCC6803
-
10.1073/pnas.1015154108, 3033270, 21245330
-
Mitschke J, Georg J, Scholz I, Sharma CM, Dienst D, Bantscheff J, Voss B, Steglich C, Wilde A, Vogel J, Hess WR. An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp PCC6803. Proc Natl Acad Sci U S A 2011, 108:2124-2129. 10.1073/pnas.1015154108, 3033270, 21245330.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 2124-2129
-
-
Mitschke, J.1
Georg, J.2
Scholz, I.3
Sharma, C.M.4
Dienst, D.5
Bantscheff, J.6
Voss, B.7
Steglich, C.8
Wilde, A.9
Vogel, J.10
Hess, W.R.11
-
38
-
-
66149143984
-
Measuring the activity of BioBrick promoters using an in vivo reference standard
-
10.1186/1754-1611-3-4, 2683166, 19298678
-
Kelly JR, Rubin AJ, Davis JH, Ajo-Franklin CM, Cumbers J, Czar MJ, De Mora K, Glieberman AL, Monie DD, Endy D. Measuring the activity of BioBrick promoters using an in vivo reference standard. J Biol Eng 2009, 3:4. 10.1186/1754-1611-3-4, 2683166, 19298678.
-
(2009)
J Biol Eng
, vol.3
, pp. 4
-
-
Kelly, J.R.1
Rubin, A.J.2
Davis, J.H.3
Ajo-Franklin, C.M.4
Cumbers, J.5
Czar, M.J.6
De Mora, K.7
Glieberman, A.L.8
Monie, D.D.9
Endy, D.10
-
39
-
-
78349307885
-
Simplicity and complexity in the cyanobacterial circadian clock mechanism
-
10.1016/j.gde.2010.09.002, 2982900, 20934870
-
Dong GG, Kim YI, Golden SS. Simplicity and complexity in the cyanobacterial circadian clock mechanism. Curr Opin Genet Dev 2010, 20:619-625. 10.1016/j.gde.2010.09.002, 2982900, 20934870.
-
(2010)
Curr Opin Genet Dev
, vol.20
, pp. 619-625
-
-
Dong, G.G.1
Kim, Y.I.2
Golden, S.S.3
-
40
-
-
84866953925
-
Modular control of multiple pathways using engineered orthogonal T7 polymerases
-
10.1093/nar/gks597, 3458549, 22743271
-
Temme K, Hill R, Segall-Shapiro TH, Moser F, Voigt CA. Modular control of multiple pathways using engineered orthogonal T7 polymerases. Nucleic Acids Res 2012, 40:8773-8781. 10.1093/nar/gks597, 3458549, 22743271.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 8773-8781
-
-
Temme, K.1
Hill, R.2
Segall-Shapiro, T.H.3
Moser, F.4
Voigt, C.A.5
-
41
-
-
84875494939
-
Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants
-
10.1073/pnas.1220157110, 3612686, 23479654
-
Shis DL, Bennett MR. Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants. Proc Natl Acad Sci USA 2013, 110:5028-5033. 10.1073/pnas.1220157110, 3612686, 23479654.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 5028-5033
-
-
Shis, D.L.1
Bennett, M.R.2
-
42
-
-
0025166089
-
Secondary structure of the ribosome binding-site determines translational efficiency-a quantitative-analysis
-
10.1073/pnas.87.19.7668, 54809, 2217199
-
De Smit MH, Vanduin J. Secondary structure of the ribosome binding-site determines translational efficiency-a quantitative-analysis. Proc Natl Acad Sci USA 1990, 87:7668-7672. 10.1073/pnas.87.19.7668, 54809, 2217199.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 7668-7672
-
-
De Smit, M.H.1
Vanduin, J.2
-
43
-
-
67650687073
-
You're one in a googol: optimizing genes for protein expression
-
2843954, 19324676
-
Welch M, Villalobos A, Gustafsson C, Minshull J. You're one in a googol: optimizing genes for protein expression. J R Soc Interface 2009, 6(4):S467-S476. 2843954, 19324676.
-
(2009)
J R Soc Interface
, vol.6
, Issue.4
-
-
Welch, M.1
Villalobos, A.2
Gustafsson, C.3
Minshull, J.4
-
44
-
-
79959368804
-
Mechanism of bacterial transcription initiation: RNA polymerase-promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesis
-
10.1016/j.jmb.2011.01.018, 3440003, 21371479
-
Saecker RM, Record MT, Dehaseth PL. Mechanism of bacterial transcription initiation: RNA polymerase-promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesis. J Mol Biol 2011, 412:754-771. 10.1016/j.jmb.2011.01.018, 3440003, 21371479.
-
(2011)
J Mol Biol
, vol.412
, pp. 754-771
-
-
Saecker, R.M.1
Record, M.T.2
Dehaseth, P.L.3
-
45
-
-
16344376192
-
Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoter
-
10.1073/pnas.0408218102, 555702, 15738402
-
Sclavi B, Zaychikov E, Rogozina A, Walther F, Buckle M, Heumann H. Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoter. Proc Natl Acad Sci USA 2005, 102:4706-4711. 10.1073/pnas.0408218102, 555702, 15738402.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 4706-4711
-
-
Sclavi, B.1
Zaychikov, E.2
Rogozina, A.3
Walther, F.4
Buckle, M.5
Heumann, H.6
-
46
-
-
84864770299
-
Opening and closing of the bacterial RNA polymerase clamp
-
10.1126/science.1218716, 3626110, 22859489
-
Chakraborty A, Wang D, Ebright YW, Korlann Y, Kortkhonjia E, Kim T, Chowdhury S, Wigneshweraraj S, Irschik H, Jansen R, et al. Opening and closing of the bacterial RNA polymerase clamp. Science 2012, 337:591-595. 10.1126/science.1218716, 3626110, 22859489.
-
(2012)
Science
, vol.337
, pp. 591-595
-
-
Chakraborty, A.1
Wang, D.2
Ebright, Y.W.3
Korlann, Y.4
Kortkhonjia, E.5
Kim, T.6
Chowdhury, S.7
Wigneshweraraj, S.8
Irschik, H.9
Jansen, R.10
-
47
-
-
0032033628
-
Promoter recognition by a cyanobacterial RNA polymerase: in vitro studies with the Calothrix sp. PCC 7601 transcriptional factors RcaA and RcaD
-
10.1023/A:1005983320006, 9526497
-
Schyns G, Jia L, Coursin T, Tandeau de Marsac N, Houmard J. Promoter recognition by a cyanobacterial RNA polymerase: in vitro studies with the Calothrix sp. PCC 7601 transcriptional factors RcaA and RcaD. Plant Mol Biol 1998, 36:649-659. 10.1023/A:1005983320006, 9526497.
-
(1998)
Plant Mol Biol
, vol.36
, pp. 649-659
-
-
Schyns, G.1
Jia, L.2
Coursin, T.3
Tandeau de Marsac, N.4
Houmard, J.5
-
48
-
-
0142214648
-
Thymine at-5 is crucial for cpc promoter activity of Synechocystis sp. strain PCC 6714
-
10.1128/JB.185.21.6477-6480.2003, 219393, 14563885
-
Imashimizu M, Fujiwara S, Tanigawa R, Tanaka K, Hirokawa T, Nakajima Y, Higo J, Tsuzuki M. Thymine at-5 is crucial for cpc promoter activity of Synechocystis sp. strain PCC 6714. J Bacteriol 2003, 185:6477-6480. 10.1128/JB.185.21.6477-6480.2003, 219393, 14563885.
-
(2003)
J Bacteriol
, vol.185
, pp. 6477-6480
-
-
Imashimizu, M.1
Fujiwara, S.2
Tanigawa, R.3
Tanaka, K.4
Hirokawa, T.5
Nakajima, Y.6
Higo, J.7
Tsuzuki, M.8
-
49
-
-
84872376390
-
Comparative study of cyanobacterial and E. coli RNA Polymerases: misincorporation, abortive transcription, and dependence on divalent cations
-
Imashimizu M, Tanaka K, Shimamoto N. Comparative study of cyanobacterial and E. coli RNA Polymerases: misincorporation, abortive transcription, and dependence on divalent cations. Genet Res Int 2011, 572689.
-
(2011)
Genet Res Int
, pp. 572689
-
-
Imashimizu, M.1
Tanaka, K.2
Shimamoto, N.3
-
50
-
-
0035170963
-
Predictive and interpretive simulation of green fluorescent protein expression in reporter bacteria
-
10.1128/JB.183.23.6752-6762.2001, 95514, 11698362
-
Leveau JH, Lindow SE. Predictive and interpretive simulation of green fluorescent protein expression in reporter bacteria. J Bacteriol 2001, 183:6752-6762. 10.1128/JB.183.23.6752-6762.2001, 95514, 11698362.
-
(2001)
J Bacteriol
, vol.183
, pp. 6752-6762
-
-
Leveau, J.H.1
Lindow, S.E.2
-
51
-
-
19444387811
-
Bacterial repression loops require enhanced DNA flexibility
-
10.1016/j.jmb.2005.04.035, 15893770
-
Becker NA, Kahn JD, Maher LJ. Bacterial repression loops require enhanced DNA flexibility. J Mol Biol 2005, 349:716-730. 10.1016/j.jmb.2005.04.035, 15893770.
-
(2005)
J Mol Biol
, vol.349
, pp. 716-730
-
-
Becker, N.A.1
Kahn, J.D.2
Maher, L.J.3
-
52
-
-
47249091433
-
Eukaryotic HMGB proteins as replacements for HU in E. coli repression loop formation
-
10.1093/nar/gkn353, 2475640, 18515834
-
Becker NA, Kahn JD, Maher LJ. Eukaryotic HMGB proteins as replacements for HU in E. coli repression loop formation. Nucleic Acids Res 2008, 36:4009-4021. 10.1093/nar/gkn353, 2475640, 18515834.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4009-4021
-
-
Becker, N.A.1
Kahn, J.D.2
Maher, L.J.3
-
53
-
-
84893822908
-
-
CyanoBase http://genome.microbedb.jp/CyanoBase.
-
CyanoBase
-
-
-
54
-
-
84876746960
-
LacI-DNA-IPTG loops: equilibria among conformations by single-molecule FRET
-
10.1021/jp308930c, 23406418
-
Goodson KA, Wang Z, Haeusler AR, Kahn JD, English DS. LacI-DNA-IPTG loops: equilibria among conformations by single-molecule FRET. J Phys Chem B 2013, 117:4713-4722. 10.1021/jp308930c, 23406418.
-
(2013)
J Phys Chem B
, vol.117
, pp. 4713-4722
-
-
Goodson, K.A.1
Wang, Z.2
Haeusler, A.R.3
Kahn, J.D.4
English, D.S.5
-
55
-
-
84871743935
-
Mechanism of promoter repression by Lac repressor-DNA loops
-
3592455, 23143103
-
Becker NA, Peters JP, Maher LJ, Lionberger TA. Mechanism of promoter repression by Lac repressor-DNA loops. Nucleic Acids Res 2012, 41:156-166. 3592455, 23143103.
-
(2012)
Nucleic Acids Res
, vol.41
, pp. 156-166
-
-
Becker, N.A.1
Peters, J.P.2
Maher, L.J.3
Lionberger, T.A.4
-
56
-
-
84875720517
-
Precise and reliable gene expression via standard transcription and translation initiation elements
-
Mutalik VK, Guimaraes JC, Cambray G, Lam C, Christoffersen MJ, Mai QA, Tran AB, Paull M, Keasling JD, Arkin AP, Endy D. Precise and reliable gene expression via standard transcription and translation initiation elements. Nat Methods 2013, 10:353-354.
-
(2013)
Nat Methods
, vol.10
, pp. 353-354
-
-
Mutalik, V.K.1
Guimaraes, J.C.2
Cambray, G.3
Lam, C.4
Christoffersen, M.J.5
Mai, Q.A.6
Tran, A.B.7
Paull, M.8
Keasling, J.D.9
Arkin, A.P.10
Endy, D.11
-
57
-
-
0014277963
-
Mutants that make more lac repressor
-
10.1073/pnas.59.4.1259, 224860, 4870861
-
Müller-Hill B, Crapo L, Gilbert W. Mutants that make more lac repressor. Proc Natl Acad Sci USA 1968, 59:1259-1264. 10.1073/pnas.59.4.1259, 224860, 4870861.
-
(1968)
Proc Natl Acad Sci USA
, vol.59
, pp. 1259-1264
-
-
Müller-Hill, B.1
Crapo, L.2
Gilbert, W.3
-
58
-
-
0015076683
-
Purification and properties of unicellular blue-green algae (Order Chroococcales)
-
378380, 4998365
-
Stanier RY, Kunisawa R, Mandel M, Cohenbaz G. Purification and properties of unicellular blue-green algae (Order Chroococcales). Bacteriol Rev 1971, 35:171. 378380, 4998365.
-
(1971)
Bacteriol Rev
, vol.35
, pp. 171
-
-
Stanier, R.Y.1
Kunisawa, R.2
Mandel, M.3
Cohenbaz, G.4
-
59
-
-
45149118469
-
Engineering BioBrick vectors from BioBrick parts
-
10.1186/1754-1611-2-5, 2373286, 18410688
-
Shetty RP, Endy D, Knight TF. Engineering BioBrick vectors from BioBrick parts. J Biol Eng 2008, 2:5. 10.1186/1754-1611-2-5, 2373286, 18410688.
-
(2008)
J Biol Eng
, vol.2
, pp. 5
-
-
Shetty, R.P.1
Endy, D.2
Knight, T.F.3
-
60
-
-
0030941679
-
Reduction of conjugal transfer efficiency by three restriction activities of Anabaena sp. strain PCC 7120
-
178925, 9068647
-
Elhai J, Vepritskiy A, Muro-Pastor AM, Flores E, Wolk CP. Reduction of conjugal transfer efficiency by three restriction activities of Anabaena sp. strain PCC 7120. J Bacteriol 1997, 179:1998-2005. 178925, 9068647.
-
(1997)
J Bacteriol
, vol.179
, pp. 1998-2005
-
-
Elhai, J.1
Vepritskiy, A.2
Muro-Pastor, A.M.3
Flores, E.4
Wolk, C.P.5
-
61
-
-
2642701711
-
A DNA fragment from the cyanobacterium Synechocystis sp. PCC 6803 mediates gene expression inducible by osmotic stress in E. coli
-
10.1007/s002849900347, 9662610
-
Milkowski C, Quinones A, Hagemann M. A DNA fragment from the cyanobacterium Synechocystis sp. PCC 6803 mediates gene expression inducible by osmotic stress in E. coli. Curr Microbiol 1998, 37:108-116. 10.1007/s002849900347, 9662610.
-
(1998)
Curr Microbiol
, vol.37
, pp. 108-116
-
-
Milkowski, C.1
Quinones, A.2
Hagemann, M.3
-
62
-
-
0033839723
-
Construction of promoter probe vectors for Synechocystis sp. PCC 6803 using the light-emitting reporter systems Gfp and LuxAB
-
10.1016/S0167-7012(00)00162-7, 10958963
-
Kunert A, Hagemann M, Erdmann N. Construction of promoter probe vectors for Synechocystis sp. PCC 6803 using the light-emitting reporter systems Gfp and LuxAB. J Microbiol Methods 2000, 41:185-194. 10.1016/S0167-7012(00)00162-7, 10958963.
-
(2000)
J Microbiol Methods
, vol.41
, pp. 185-194
-
-
Kunert, A.1
Hagemann, M.2
Erdmann, N.3
-
63
-
-
67349270900
-
Enzymatic assembly of DNA molecules up to several hundred kilobases
-
Gibson DG, Young L, Chuang RY, Venter JC, Hutchison CA, Smith HO. Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Methods 2009, 6:U341-U343.
-
(2009)
Nat Methods
, vol.6
-
-
Gibson, D.G.1
Young, L.2
Chuang, R.Y.3
Venter, J.C.4
Hutchison, C.A.5
Smith, H.O.6
-
65
-
-
33947704150
-
Improved green and blue fluorescent proteins for expression in bacteria and mammalian cells
-
Kremers GJ, Goedhart J, van den Heuvel DJ, Gerritsen HC, Gadella TWJ. Improved green and blue fluorescent proteins for expression in bacteria and mammalian cells. Biochemistry (Mosc) 2007, 46:3775-3783.
-
(2007)
Biochemistry (Mosc)
, vol.46
, pp. 3775-3783
-
-
Kremers, G.J.1
Goedhart, J.2
van den Heuvel, D.J.3
Gerritsen, H.C.4
Gadella, T.W.J.5
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