Screening for the target gene of cyanobacterial cAMP receptor protein SYCRP1

Molecular Microbiology

Volumn 43, Issue 4, 2002, Pages 843-853

  Yoshimura, Hidehisa ^a   Yanagisawa, Shuichi ^a   Kanehisa, Minoru ^b   Ohmori, Masayuki ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; CYCLIC AMP BINDING PROTEIN; DEOXYRIBONUCLEASE I; PROTEIN SYCRP1; UNCLASSIFIED DRUG;

ANALYTIC METHOD; ARTICLE; BACTERIAL GENE; BINDING SITE; CONTROLLED STUDY; CYANOBACTERIUM; DNA FOOTPRINTING; DNA MICROARRAY; GEL MOBILITY SHIFT ASSAY; GENE DISRUPTION; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENE TARGETING; GENETIC SCREENING; NONHUMAN; OPERON; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DNA BINDING; PROTEIN FUNCTION; RNA EXTRACTION; SYRP1 GENE; TRANSCRIPTION INITIATION;

BACTERIAL PROTEINS; BASE SEQUENCE; CYANOBACTERIA; DNA, BACTERIAL; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; HISTIDINE; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, CYCLIC AMP; TRANSCRIPTION INITIATION SITE; TRANSCRIPTION, GENETIC;

BACTERIA (MICROORGANISMS); CYANOBACTERIA; NEGIBACTERIA; PROKARYOTA; SYNECHOCYSTIS; SYNECHOCYSTIS SP.; SYNECHOCYSTIS SP. PCC 6803;

EID: 0036230640     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.2002.02790.x     Document Type: Article

References (40)

1. Global gene expression profiling inEscherichia coli K12. The effects of integration host factor
2. Cyclic AMP in prokaryotes
3. Isolation and characterization of the gene encoding the principal sigma factor of the vegetative cell RNA polymerase from the cyanobacterium Anabaena sp. strain PCC 7120
4. Control site location and transcriptional regulation in Escherichia coli
5. The transcription apparatus and the regulation of transcription initiation
6. Exploring the metabolic and genetic control of gene expression on a genomic scale
7. Transcription activation at class I CAP-dependent promoters
8. A versatile class of positive-selection vectors based on the nonviability of palindrome-containing plasmids that allows cloning into long polylinkers
9. Antirepression function in Escherichia coli for the cAMP-cAMP receptor protein transcriptional activator
10. DNA microarray analysis of cyanobacterial gene expression during acclimation to high light
11. Effect of nitrogen starvation on the level of adenosine 3′,5′-monophosphate in Anabaena variabilis
12. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions
13. Activation of a cyanobacterial adenylate cyclase, CyaC, by autophosphorylation and a subsequent phosphotransfer reaction
14. The Spirulina platensis adenylate cyclase gene, cyaC, encodes a novel signal transduction protein
15. Isolation and characterization of multiple adenylate cyclase genes from the cyanobacterium Anabaena sp. strain PCC 7120
16. Molecular cloning of the cyanobacterial adenylate cyclase gene from the filamentous cyanobacterium Anabaena cylindrica
17. Transcriptional regulation by cAMP and its receptor protein
18. Yeast microarrays for genome wide parallel genetic and gene expression analysis
19. AraC-DNA looping: Orientation and distance-dependent loop breaking by the cyclic AMP receptor protein
20. Promoter elements required for positive control of transcription of the Escherichia coli uhpT gene
21. Transcription activation at the Escherichia coli uhpT promoter by the catabolite gene activator protein
22. Influence of light on accumulation of photosynthesis-specific transcripts in the cyanobacterium Synechocystis 6803
23. An automatic homology modeling method consisting of database searches and simulated annealing
24. cAMP in Anabaena cylindrica: Rapid changes in cellular levels in response to changes in extracellular environments
25. Function of cAMP as a mat-forming factor in the cyanobacterium Spirulina platensis
26. Rapid change in cyclic-3′,5′-AMP concentration triggered by a light-off or light-on signal in Anabaena cylindrica
27. On the role of the multiple regulatory elements involved in the activation of the Escherichia coli malEp promoter
28. A new mechanism for coactivation of transcription initiation: Repositioning of an activator triggered by the binding of a second activator
29. Microarray-based identification of a novel Streptococcus pneumoniae regulon controlled by an autoinduced peptide
30. Promoter recognition by the RNA polymerase from vegetative cells of the cyanobacterium Anabaena 7120
31. Crystal structure of a CAP-DNA complex: The DNA is bent by 90 degrees
32. Specificity in the cAMP/PKA signaling pathway. Differential expression, regulation, and subcellular localization of subunits of PKA
33. Purification and properties of unicellular blue-green algae (order Chroococcales)
34. Cold-regulated genes under control of the cold sensor Hik33 in Synechocystis
35. Helical phase dependent action of CRP: Effect of the distance between the CRP site and the -35 region on promoter activity
36. Construction of specific mutations in photosystem II photosynthetic reaction center by genetic engineering methods in Synechocystis 6803
37. Molecular characterization of an adenylate cyclase gene of the cyanobacterium Spirulina platensis
38. Global gene expression profiles of Bacillus subtilis grown under anaerobic conditions
39. Identification and characterization of a novel cAMP receptor protein in the cyanobacterium Synechocystis sp. PCC6803