Distinct 5-methylcytosine profiles in poly(A) RNA from mouse embryonic stem cells and brain

Genome Biology

Volumn 18, Issue 1, 2017, Pages

  Amort, Thomas ^a   Rieder, Dietmar ^a   Wille, Alexandra ^a   Khokhlova Cubberley, Daria ^b   Riml, Christian ^c   Trixl, Lukas ^a   Jia, Xi Yu ^b   Micura, Ronald ^c   Lusser, Alexandra ^a  

^a INNSBRUCK MEDICAL UNIVERSITY   (Austria)

^b Zymo Research Corporation   (United States)

^c UNIVERSITY OF INNSBRUCK   (Austria)

Author keywords

5 Methylcytosine; Bisulfite sequencing; Embryonic stem cells; Epitranscriptome; M5C; M6A; MeRIP; Mouse brain; RNA binding proteins; RNA methylation

Indexed keywords

5 METHYLCYTOSINE; 6 N METHYLADENOSINE; CYTOSINE; MESSENGER RNA; MICRORNA; POLYADENYLATED RNA; RNA BINDING PROTEIN; TRANSCRIPTOME; PROTEIN BINDING;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ADULT; ANIMAL CELL; ANIMAL TISSUE; ARTICLE; BINDING SITE; BRAIN; CELL NUCLEUS; CONTROLLED STUDY; CORRELATIONAL STUDY; CYTOPLASM; EMBRYONIC STEM CELL; GENE ONTOLOGY; MOUSE; NONHUMAN; RNA METHYLATION; START CODON; ANIMAL; ANTIBODY SPECIFICITY; CHEMISTRY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; METHYLATION; MOUSE EMBRYONIC STEM CELL; NUCLEOTIDE MOTIF; RNA INTERFERENCE; SEQUENCE ANALYSIS;

5-METHYLCYTOSINE; ANIMALS; BINDING SITES; BRAIN; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; METHYLATION; MICE; MICRORNAS; MOUSE EMBRYONIC STEM CELLS; NUCLEOTIDE MOTIFS; ORGAN SPECIFICITY; PROTEIN BINDING; RNA INTERFERENCE; RNA, MESSENGER; RNA-BINDING PROTEINS; SEQUENCE ANALYSIS, RNA; TRANSCRIPTOME;

EID: 85009966202     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/s13059-016-1139-1     Document Type: Article

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