-
1
-
-
0029082529
-
Structure of the P1 helix from group-I self-splicing introns
-
Allain FHT, Varani G. 1995. Structure of the P1 helix from group-I self-splicing introns. J Mol Biol 250: 333-353.
-
(1995)
J Mol Biol
, vol.250
, pp. 333-353
-
-
Allain, F.H.T.1
Varani, G.2
-
2
-
-
0025942059
-
A thermodynamic study of unusually stable RNA and DNA hairpins
-
Antao VP, Lai SY, Tinoco I. 1991. A thermodynamic study of unusually stable RNA and DNA hairpins. Nucleic Acids Res 19: 5901-5905. (Pubitemid 21913002)
-
(1991)
Nucleic Acids Research
, vol.19
, Issue.21
, pp. 5901-5905
-
-
Antao, V.P.1
Lai, S.Y.2
Tinoco Jr., I.3
-
3
-
-
0035228079
-
X-chromosome inactivation: Counting, choice and initiation
-
DOI 10.1038/35047580
-
Avner P, Heard E. 2001. X-chromosome inactivation: counting, choice and initiation. Nat Rev Genet 2: 59-67. (Pubitemid 33674770)
-
(2001)
Nature Reviews Genetics
, vol.2
, Issue.1
, pp. 59-67
-
-
Avner, P.1
Heard, E.2
-
4
-
-
0033654297
-
Generalized Born models of macromolecular solvation effects
-
Bashford D, Case DA. 2000. Generalized Born models of macromolecular solvation effects. Annu Rev Phys Chem 51: 129-152.
-
(2000)
Annu Rev Phys Chem
, vol.51
, pp. 129-152
-
-
Bashford, D.1
Case, D.A.2
-
5
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW, Jiang JS, Kuszewski J, Nilges M, Pannu NS, et al. 1998. Crystallography and NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr 54: 905-921.
-
(1998)
Acta Crystallogr D Biol Crystallogr
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
6
-
-
0029011701
-
A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
-
Cornell WD, Cieplak P, Bayly CI, Gould IR, Merz KM, Ferguson DM, Spellmeyer DC, Fox T, Caldwell JW, Kollman PA. 1995. A second generation force field for the simulation of proteins, nucleic acids, and organic molecules. J Am Chem Soc 117: 5179-5197.
-
(1995)
J Am Chem Soc
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplak, P.2
Bayly, C.I.3
Gould, I.R.4
Merz, K.M.5
Ferguson, D.M.6
Spellmeyer, D.C.7
Fox, T.8
Caldwell, J.W.9
Kollman, P.A.10
-
7
-
-
0032528033
-
Validation of protein structure from anisotropic carbonyl chemical shifts in a dilute liquid crystalline phase
-
DOI 10.1021/ja9812610
-
Cornilescu G, Marquardt JL, Ottiger M, Bax A. 1998. Validation of protein structure from anisotropic carbonyl chemical shifts in a dilute liquid crystalline phase. J Am Chem Soc 120: 6836-6837. (Pubitemid 28347351)
-
(1998)
Journal of the American Chemical Society
, vol.120
, Issue.27
, pp. 6836-6837
-
-
Cornilescu, G.1
Marquardt, J.L.2
Ottiger, M.3
Bax, A.4
-
8
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio F, Grzesiek S, Vuister GW, Zhu G, Pfeifer J, Bax A. 1995. NMRPipe: A multidimensional spectral processing system based on UNIX pipes. J Biol NMR 6: 277-293.
-
(1995)
J Biol NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
10
-
-
7744228427
-
Polycomb group proteins ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation
-
DOI 10.1016/j.devcel.2004.10.005, PII S1534580704003673
-
de Napoles M, Mermoud JE, Wakao R, Tang YA, Endoh M, Appanah R, Nesterova TB, Silva J, Otte AP, Vidal M, et al. 2004. Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation. Dev Cell 7: 663-676. (Pubitemid 39462687)
-
(2004)
Developmental Cell
, vol.7
, Issue.5
, pp. 663-676
-
-
De Napoles, M.1
Mermoud, J.E.2
Wakao, R.3
Tang, Y.A.4
Endoh, M.5
Appanah, R.6
Nesterova, T.B.7
Silva, J.8
Otte, A.P.9
Vidal, M.10
Koseki, H.11
Brockdorff, N.12
-
11
-
-
0032569220
-
2J(NN) couplings
-
DOI 10.1021/ja981513x
-
Dingley AJ, Grzesiek S. 1998. Direct observation of hydrogen bonds in nucleic acid base pairs by internucleotide 2JNN couplings. J Am Chem Soc 120: 8293-8297. (Pubitemid 28420452)
-
(1998)
Journal of the American Chemical Society
, vol.120
, Issue.33
, pp. 8293-8297
-
-
Dingley, A.J.1
Grzesiek, S.2
-
12
-
-
84858297991
-
31P chemical shift assignments of a human Xist RNA A-repeat tetraloop hairpin essential for X-chromosome inactivation
-
doi: 10.1007/s12104-011-9328-z
-
31P chemical shift assignments of a human Xist RNA A-repeat tetraloop hairpin essential for X-chromosome inactivation. Biomol NMR Assign doi: 10.1007/s12104-011-9328-z.
-
(2011)
Biomol NMR Assign
-
-
Duszczyk, M.M.1
Sattler, M.2
-
13
-
-
58749086587
-
A NMR strategy to unambiguously distinguish nucleic acid hairpin and duplex conformations applied to a Xist RNA A-repeat
-
Duszczyk MM, Zanier K, Sattler M. 2008. A NMR strategy to unambiguously distinguish nucleic acid hairpin and duplex conformations applied to a Xist RNA A-repeat. Nucleic Acids Res 36: 7068-7077.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 7068-7077
-
-
Duszczyk, M.M.1
Zanier, K.2
Sattler, M.3
-
15
-
-
34249765651
-
NMR View: A computer program for the visualization and analysis of NMR data
-
Johnson BA, Blevins RA. 1994. NMR View: A computer program for the visualization and analysis of NMR data. J Biol NMR 4: 603-614.
-
(1994)
J Biol NMR
, vol.4
, pp. 603-614
-
-
Johnson, B.A.1
Blevins, R.A.2
-
16
-
-
0028866812
-
Solution structure of the CUUG hairpin loop: A novel RNA tetraloop motif
-
Jucker FM, Pardi A. 1995. Solution structure of the CUUG hairpin loop: A novel RNA tetraloop motif. Biochemistry 34: 14416-14427.
-
(1995)
Biochemistry
, vol.34
, pp. 14416-14427
-
-
Jucker, F.M.1
Pardi, A.2
-
17
-
-
0030596092
-
A network of heterogeneous hydrogen bonds in GNRA tetraloops
-
DOI 10.1006/jmbi.1996.0690
-
Jucker FM, Heus HA, Yip PF, Moors EHM, Pardi A. 1996. A network of heterogeneous hydrogen bonds in GNRA tetraloops. J Mol Biol 264: 968-980. (Pubitemid 27019486)
-
(1996)
Journal of Molecular Biology
, vol.264
, Issue.5
, pp. 968-980
-
-
Jucker, F.M.1
Heus, H.A.2
Yip, P.F.3
Moors, E.H.M.4
Pardi, A.5
-
18
-
-
77953107585
-
Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2
-
Kanhere A, Viiri K, Araújo CC, Rasaiyaah J, Bouwman RD, Whyte WA, Pereira CF, Brookes E, Walker K, Bell GW, et al. 2010. Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2. Mol Cell 38: 675-688.
-
(2010)
Mol Cell
, vol.38
, pp. 675-688
-
-
Kanhere, A.1
Viiri, K.2
Araújo, C.C.3
Rasaiyaah, J.4
Bouwman, R.D.5
Whyte, W.A.6
Pereira, C.F.7
Brookes, E.8
Walker, K.9
Bell, G.W.10
-
19
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
DOI 10.1016/0263-7855(96)00009-4
-
Koradi R, Billeter M, Wüthrich K. 1996. MOLMOL: a program for display and analysis of macromolecular structures. J Mol Graph 14: 51-55. (Pubitemid 26152976)
-
(1996)
Journal of Molecular Graphics
, vol.14
, Issue.1
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wuthrich, K.3
-
20
-
-
0003443949
-
-
Royal Society of Chemistry, Cambridge, UK
-
Laue T, Shah B, Ridgeway T, Pelletier S. 1992. Analytical ultracentrifugation in biochemistry and polymer science. Royal Society of Chemistry, Cambridge, UK.
-
(1992)
Analytical Ultracentrifugation in Biochemistry and Polymer Science
-
-
Laue, T.1
Shah, B.2
Ridgeway, T.3
Pelletier, S.4
-
21
-
-
0033214928
-
Targeted mutagenesis of Tsix leads to nonrandom X inactivation
-
DOI 10.1016/S0092-8674(00)80061-6
-
Lee JT, Lu N. 1999. Targeted mutagenesis of Tsix leads to nonrandom X inactivation. Cell 99: 47-57. (Pubitemid 29468629)
-
(1999)
Cell
, vol.99
, Issue.1
, pp. 47-57
-
-
Lee, J.T.1
Lu, N.2
-
22
-
-
0037316363
-
ARIA: Automated NOE assignment and NMR structure calculation
-
DOI 10.1093/bioinformatics/19.2.315
-
Linge JP, Habeck M, Rieping W, Nilges M. 2003. ARIA: Automated NOE assignment and NMR structure calculation. Bioinformatics 19: 315-316. (Pubitemid 36181930)
-
(2003)
Bioinformatics
, vol.19
, Issue.2
, pp. 315-316
-
-
Linge, J.P.1
Habeck, M.2
Rieping, W.3
Nilges, M.4
-
23
-
-
29444458753
-
Chromatin remodeling in dosage compensation
-
DOI 10.1146/annurev.genet.39.073003.094210
-
Lucchesi JC, Kelly WG, Panning B. 2005. Chromatin remodeling in dosage compensation. Annu Rev Genet 39: 615-651. (Pubitemid 43011128)
-
(2005)
Annual Review of Genetics
, vol.39
, pp. 615-651
-
-
Lucchesi, J.C.1
Kelly, W.G.2
Panning, B.3
-
24
-
-
75749124997
-
2-D structure of the A region of Xist RNA and its implication for PRC2 association
-
doi: 10.1371/journal.pbio.1000276
-
Maenner S, Blaud M, Fouillen L, Savoye A, Marchand V, Dubois AS, Sanglier-Cianférani S, Van Dorsselaer A, Clerc P, Avner P, et al. 2010. 2-D structure of the A region of Xist RNA and its implication for PRC2 association. PLoS Biol 8: e1000276. doi: 10.1371/journal.pbio.1000276.
-
(2010)
PLoS Biol
, vol.8
-
-
Maenner, S.1
Blaud, M.2
Fouillen, L.3
Savoye, A.4
Marchand, V.5
Dubois, A.S.6
Sanglier-Cianférani, S.7
Van Dorsselaer, A.8
Clerc, P.9
Avner, P.10
-
25
-
-
45549098196
-
Intersection of the RNA interference and X-inactivation pathways
-
DOI 10.1126/science.1157676
-
Ogawa Y, Sun BK, Lee JT. 2008. Intersection of the RNA interference and X-inactivation pathways. Science 320: 1336-1341. (Pubitemid 351929469)
-
(2008)
Science
, vol.320
, Issue.5881
, pp. 1336-1341
-
-
Ogawa, Y.1
Sun, B.K.2
Lee, J.T.3
-
26
-
-
0030026001
-
Requirement for Xist in X-chromosome inactivation
-
Penny GD, Kay GF, Sheardown SA, Rastan S, Brockdorff N. 1996. Requirement for Xist in X-chromosome inactivation. Nature 379: 131-137.
-
(1996)
Nature
, vol.379
, pp. 131-137
-
-
Penny, G.D.1
Kay, G.F.2
Sheardown, S.A.3
Rastan, S.4
Brockdorff, N.5
-
27
-
-
0242668706
-
Role of histone H3 lysine 27 methylation in X inactivation
-
DOI 10.1126/science.1084274
-
Plath K, Fang J, Mlynarczyk-Evans SK, Cao R, Worringer KA, Wang H, de la Cruz CC, Otte AP, Panning B, Zhang Y. 2003. Role of histone H3 lysine 27 methylation in X inactivation. Science 300: 131-135. (Pubitemid 36423045)
-
(2003)
Science
, vol.300
, Issue.5616
, pp. 131-135
-
-
Plath, K.1
Fang, J.2
Mlynarczyk-Evans, S.K.3
Cao, R.4
Worringer, K.A.5
Wang, H.6
De La, C.C.C.7
Otte, A.P.8
Panning, B.9
Zhang, Y.10
-
28
-
-
11244313165
-
Developmentally regulated alterations in polycomb repressive complex 1 proteins on the inactive X chromosome
-
DOI 10.1083/jcb.200409026
-
Plath K, Talbot D, Hamer KM, Otte AP, Yang TP, Jaenisch R, Panning B. 2004. Developmentally regulated alterations in Polycomb repressive complex 1 proteins on the inactive X chromosome. J Cell Biol 167: 1025-1035. (Pubitemid 40066619)
-
(2004)
Journal of Cell Biology
, vol.167
, Issue.6
, pp. 1025-1035
-
-
Plath, K.1
Talbot, D.2
Hamer, K.M.3
Otte, A.P.4
Yang, T.P.5
Jaenisch, R.6
Panning, B.7
-
29
-
-
77955418467
-
The A-repeat links ASF/SF2-dependent Xist RNA processing with random choice during X inactivation
-
Royce-Tolland ME, Andersen AA, Koyfman HR, Talbot DJ, Wutz A, Tonks ID, Kay GF, Panning B. 2010. The A-repeat links ASF/SF2-dependent Xist RNA processing with random choice during X inactivation. Nat Struct Mol Biol 17: 948-954.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 948-954
-
-
Royce-Tolland, M.E.1
Andersen, A.A.2
Koyfman, H.R.3
Talbot, D.J.4
Wutz, A.5
Tonks, I.D.6
Kay, G.F.7
Panning, B.8
-
30
-
-
33746407708
-
Recruitment of PRC1 function at the initiation of X inactivation independent of PRC2 and silencing
-
DOI 10.1038/sj.emboj.7601187, PII 7601187
-
Schoeftner S, Sengupta AK, Kubicek S, Mechtler K, Spahn L, Koseki H, Jenuwein T, Wutz A. 2006. Recruitment of PRC1 function at the initiation of X inactivation independent of PRC2 and silencing. EMBO J 25: 3110-3122. (Pubitemid 44121103)
-
(2006)
EMBO Journal
, vol.25
, Issue.13
, pp. 3110-3122
-
-
Schoeftner, S.1
Sengupta, A.K.2
Kubicek, S.3
Mechtler, K.4
Spahn, L.5
Koseki, H.6
Jenuwein, T.7
Wutz, A.8
-
31
-
-
0034009520
-
Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling
-
Schuck P. 2000. Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling. Biophys J 78: 1606-1619. (Pubitemid 30141584)
-
(2000)
Biophysical Journal
, vol.78
, Issue.3
, pp. 1606-1619
-
-
Schuck, P.1
-
32
-
-
18844472627
-
Stabilization of Xist RNA mediates initiation of X chromosome inactivation
-
DOI 10.1016/S0092-8674(01)80012-X
-
Sheardown SA, Duthie SM, Johnston CM, Newall AE, Formstone EJ, Arkell RM, Nesterova TB, Alghisi GC, Rastan S, Brockdorff N. 1997. Stabilization of Xist RNA mediates initiation of X chromosome inactivation. Cell 91: 99-107. (Pubitemid 27431316)
-
(1997)
Cell
, vol.91
, Issue.1
, pp. 99-107
-
-
Sheardown, S.A.1
Duthie, S.M.2
Johnston, C.M.3
Newall, A.E.T.4
Formstone, E.J.5
Arkell, R.M.6
Nesterova, T.B.7
Alghisi, G.-C.8
Rastan, S.9
Brockdorff, N.10
-
33
-
-
0037387711
-
Establishment of histone H3 methylation on the inactive X chromosome requires transient recruitment of Eed-Enx1 polycomb group complexes
-
DOI 10.1016/S1534-5807(03)00068-6, PII S1534580703000686
-
Silva J, Mak W, Zvetkova I, Appanah R, Nesterova TB, Webster Z, Peters AHFM, Jenuwein T, Otte AP, Brockdorff N. 2003. Establishment of histone H3 methylation on the inactive X chromosome requires transient recruitment of Eed-Enx1 Polycomb group complexes. Dev Cell 4: 481-495. (Pubitemid 36437556)
-
(2003)
Developmental Cell
, vol.4
, Issue.4
, pp. 481-495
-
-
Silva, J.1
Mak, W.2
Zvetkova, I.3
Appanah, R.4
Nesterova, T.B.5
Webster, Z.6
Peters, A.H.F.M.7
Jenuwein, T.8
Otte, A.P.9
Brockdorff, N.10
-
35
-
-
0000321069
-
1H chemical shift calculations for use in structure refinement
-
Wijmenga SS, Kruithof M, Hilbers CW. 1997. Analysis of H-1 chemical shifts in DNA: Assessment of the reliability of H-1 chemical shift calculations for use in structure refinement. J Biol NMR 10: 337-350. (Pubitemid 127505374)
-
(1997)
Journal of Biomolecular NMR
, vol.10
, Issue.4
, pp. 337-350
-
-
Wijmenga, S.S.1
Kruithof, M.2
Hilbers, C.W.3
-
36
-
-
0025047647
-
Architecture of ribosomal RNA: Constraints on the sequence of "tetra-loops"
-
Woese CR, Winker S, Gutell RR. 1990. Architecture of ribosomal RNA: Constraints on the sequence of "tetra-loops". Proc Natl Acad Sci 87: 8467-8471.
-
(1990)
Proc Natl Acad Sci
, vol.87
, pp. 8467-8471
-
-
Woese, C.R.1
Winker, S.2
Gutell, R.R.3
-
37
-
-
0036479009
-
Chromosomal silencing and localization are mediated by different domains of Xist RNA
-
Wutz A, Rasmussen TP, Jaenisch R. 2002. Chromosomal silencing and localization are mediated by different domains of Xist RNA. Nat Genet 30: 167-174.
-
(2002)
Nat Genet
, vol.30
, pp. 167-174
-
-
Wutz, A.1
Rasmussen, T.P.2
Jaenisch, R.3
-
38
-
-
55349109963
-
Polycomb proteins targeted by a short repeat RNA to the mouse X-chromosome
-
Zhao J, Sun BK, Erwin JA, Song J-J, Lee JT. 2008. Polycomb proteins targeted by a short repeat RNA to the mouse X-chromosome. Science 322: 750-756.
-
(2008)
Science
, vol.322
, pp. 750-756
-
-
Zhao, J.1
Sun, B.K.2
Erwin, J.A.3
Song, J.-J.4
Lee, J.T.5
-
39
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
DOI 10.1093/nar/gkg595
-
Zuker M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415. (Pubitemid 37442169)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.13
, pp. 3406-3415
-
-
Zuker, M.1
|