SCOPUS 정보 검색 플랫폼

Methods

Volumn 77, Issue , 2015, Pages 69-74

Identification of intrinsically disordered regions in PTEN and delineation of its function via a network approach

(3) Malaney, Prerna a Uversky, Vladimir N b,c,d Davé, Vrushank a,e

a UNIVERSITY OF SOUTH FLORIDA (United States)

b UNIVERSITY OF SOUTH FLORIDA (United States)

c INSTITUTE FOR BIOLOGICAL INSTRUMENTATION (Russian Federation)

d KING ABDULAZIZ UNIVERSITY (Saudi Arabia)

e H LEE MOFFITT CANCER CENTER AND RESEARCH INSTITUTE (United States)

Author keywords

Intrinsic disorder; Network medicine; Protein protein interactions; PTEN

Indexed keywords

INTRINSICALLY DISORDERED PROTEIN; ISOPROTEIN; PHOSPHATIDYLINOSITOL 3,4,5 TRISPHOSPHATE 3 PHOSPHATASE; PTEN PROTEIN, HUMAN; TUMOR SUPPRESSOR PROTEIN;

AMINO TERMINAL SEQUENCE; ANIMAL; ARTICLE; CARBOXY TERMINAL SEQUENCE; CHEMISTRY; GENE REGULATORY NETWORK; GENETICS; HUMAN; NONHUMAN; PRIORITY JOURNAL; PROTEIN AGGREGATION; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION;

ANIMALS; CHEMISTRY; GENE REGULATORY NETWORKS; GENETICS; HUMANS; INTRINSICALLY DISORDERED PROTEINS; PROTEIN INTERACTION DOMAINS AND MOTIFS; PROTEIN ISOFORMS; PTEN PHOSPHOHYDROLASE; TUMOR SUPPRESSOR PROTEINS;

EID: 84964290619 PISSN: 10462023 EISSN: 10959130 Source Type: Journal
DOI: 10.1016/j.ymeth.2014.10.005 Document Type: Article

Times cited : (15)

References (89)

1
- 48249097986
- Uversky V.N., Oldfield C.J., Dunker A.K. Annu. Rev. Biophys. 2008, 37:215-246.
- (2008) Annu. Rev. Biophys. , vol.37 , pp. 215-246
- Uversky, V.N.¹ Oldfield, C.J.² Dunker, A.K.³

2
- 0035022941
- Dunker A.K., et al. J. Mol. Graph. Model. 2001, 19(1):26-59.
- (2001) J. Mol. Graph. Model. , vol.19 , Issue.1 , pp. 26-59
- Dunker, A.K.¹

3
- 84926317610
- Uversky V.N. Front. Mol. Biosci. 2014, 1. 10.3389/fmolb.2014.00006.
- (2014) Front. Mol. Biosci. , vol.1
- Uversky, V.N.¹

4
- 33847795359
- Radivojac P., et al. Biophys. J. 2007, 92(5):1439-1456.
- (2007) Biophys. J. , vol.92 , Issue.5 , pp. 1439-1456
- Radivojac, P.¹

5
- 0035188314
- Romero P., et al. Proteins 2001, 42(1):38-48.
- (2001) Proteins , vol.42 , Issue.1 , pp. 38-48
- Romero, P.¹

6
- 34447539760
- Vacic V., et al. BMC Bioinformatics 2007, 8. 10.1186/1471-2105-8-211.
- (2007) BMC Bioinformatics , vol.8
- Vacic, V.¹

7
- 68749093787
- He B., et al. Cell Res. 2009, 19(8):929-949.
- (2009) Cell Res. , vol.19 , Issue.8 , pp. 929-949
- He, B.¹

8
- 0036408751
- Iakoucheva L.M., et al. J. Mol. Biol. 2002, 323(3):573-584.
- (2002) J. Mol. Biol. , vol.323 , Issue.3 , pp. 573-584
- Iakoucheva, L.M.¹

9
- 79958072421
- Babu M.M., et al. Curr. Opin. Struct. Biol. 2011, 21(3):432-440.
- (2011) Curr. Opin. Struct. Biol. , vol.21 , Issue.3 , pp. 432-440
- Babu, M.M.¹

10
- 57149116929
- Gsponer J., et al. Science 2008, 322(5906):1365-1368.
- (2008) Science , vol.322 , Issue.5906 , pp. 1365-1368
- Gsponer, J.¹

11
- 9644252804
- Mark W.Y., et al. J. Mol. Biol. 2005, 345(2):275-287.
- (2005) J. Mol. Biol. , vol.345 , Issue.2 , pp. 275-287
- Mark, W.Y.¹

12
- 40949117264
- Oldfield C.J., et al. BMC Genomics 2008, 9(Suppl.1).
- (2008) BMC Genomics , vol.9 , Issue.SUPPL.1
- Oldfield, C.J.¹

13
- 84885096545
- Malaney P., Uversky V.N., Dave V. Mol. BioSyst. 2013, 9(11):2877-2888.
- (2013) Mol. BioSyst. , vol.9 , Issue.11 , pp. 2877-2888
- Malaney, P.¹ Uversky, V.N.² Dave, V.³

14
- 84879619834
- Malaney P., et al. Sci. Rep. 2013, 3:2035.
- (2013) Sci. Rep. , vol.3 , pp. 2035
- Malaney, P.¹

15
- 44449116120
- Wells M., et al. Proc. Natl. Acad. Sci. U.S.A. 2008, 105(15):5762-5767.
- (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , Issue.15 , pp. 5762-5767
- Wells, M.¹

16
- 28944437358
- Rubin S.M., et al. Cell 2005, 123(6):1093-1106.
- (2005) Cell , vol.123 , Issue.6 , pp. 1093-1106
- Rubin, S.M.¹

17
- 84876808719
- Dick F.A., Rubin S.M. Nat. Rev. Mol. Cell Biol. 2013, 14(5):297-306.
- (2013) Nat. Rev. Mol. Cell Biol. , vol.14 , Issue.5 , pp. 297-306
- Dick, F.A.¹ Rubin, S.M.²

18
- 0032929012
- Adams P.D., et al. Mol. Cell. Biol. 1999, 19(2):1068-1080.
- (1999) Mol. Cell. Biol. , vol.19 , Issue.2 , pp. 1068-1080
- Adams, P.D.¹

19
- 77956340499
- Hirschi A., et al. Nat. Struct. Mol. Biol. 2010, 17(9):1051-1057.
- (2010) Nat. Struct. Mol. Biol. , vol.17 , Issue.9 , pp. 1051-1057
- Hirschi, A.¹

20
- 0035300496
- Pan W., et al. Cancer Res. 2001, 61(7):2885-2891.
- (2001) Cancer Res. , vol.61 , Issue.7 , pp. 2885-2891
- Pan, W.¹

21
- 77952387813
- Burke J.R., et al. J. Biol. Chem. 2010, 285(21):16286-16293.
- (2010) J. Biol. Chem. , vol.285 , Issue.21 , pp. 16286-16293
- Burke, J.R.¹

22
- 84861790525
- Burke J.R., Hura G.L., Rubin S.M. Genes Dev. 2012, 26(11):1156-1166.
- (2012) Genes Dev. , vol.26 , Issue.11 , pp. 1156-1166
- Burke, J.R.¹ Hura, G.L.² Rubin, S.M.³

23
- 79953038262
- Hollander M.C., Blumenthal G.M., Dennis P.A. Nat. Rev. Cancer 2011, 11(4):289-301.
- (2011) Nat. Rev. Cancer , vol.11 , Issue.4 , pp. 289-301
- Hollander, M.C.¹ Blumenthal, G.M.² Dennis, P.A.³

24
- 0032577699
- Maehama T., Dixon J.E. J. Biol. Chem. 1998, 273(22):13375-13378.
- (1998) J. Biol. Chem. , vol.273 , Issue.22 , pp. 13375-13378
- Maehama, T.¹ Dixon, J.E.²

25
- 84860217431
- Song M.S., Salmena L., Pandolfi P.P. Nat. Rev. Mol. Cell Biol. 2012, 13(5):283-296.
- (2012) Nat. Rev. Mol. Cell Biol. , vol.13 , Issue.5 , pp. 283-296
- Song, M.S.¹ Salmena, L.² Pandolfi, P.P.³

26
- 40549118822
- Planchon S.M., Waite K.A., Eng C. J. Cell Sci. 2008, 121(Pt 3):249-253.
- (2008) J. Cell Sci. , vol.121 , pp. 249-253
- Planchon, S.M.¹ Waite, K.A.² Eng, C.³

27
- 43249083765
- Chang C.J., et al. Mol. Cell. Biol. 2008, 28(10):3281-3289.
- (2008) Mol. Cell. Biol. , vol.28 , Issue.10 , pp. 3281-3289
- Chang, C.J.¹

28
- 84880710673
- Bassi C., et al. Science 2013, 341(6144):395-399.
- (2013) Science , vol.341 , Issue.6144 , pp. 395-399
- Bassi, C.¹

29
- 26444498071
- Liu F., et al. J. Cell. Biochem. 2005, 96(2):221-234.
- (2005) J. Cell. Biochem. , vol.96 , Issue.2 , pp. 221-234
- Liu, F.¹

30
- 33748319341
- Gil A., et al. Mol. Biol. Cell 2006, 17(9):4002-4013.
- (2006) Mol. Biol. Cell , vol.17 , Issue.9 , pp. 4002-4013
- Gil, A.¹

31
- 84964305010
- Li P., et al. Mol. Biol. Rep. 2014, 6383-6390.
- (2014) Mol. Biol. Rep. , pp. 6383-6390
- Li, P.¹

32
- 84887589243
- Bononi A., et al. Cell Death Differ. 2013, 20(12):1631-1643.
- (2013) Cell Death Differ. , vol.20 , Issue.12 , pp. 1631-1643
- Bononi, A.¹

33
- 84880823162
- Gabriel K., et al. PLoS ONE 2013, 8(7). 10.1371/journal.pone.0070047.
- (2013) PLoS ONE , vol.8 , Issue.7
- Gabriel, K.¹

34
- 84866857904
- Putz U., et al. Sci. Signal. 2012, 5(243):ra70. 10.1126/scisignal.2003084.
- (2012) Sci. Signal. , vol.5 , Issue.243 , pp. ra70
- Putz, U.¹

35
- 84880737776
- Hopkins B.D., et al. Science 2013, 341(6144):399-402.
- (2013) Science , vol.341 , Issue.6144 , pp. 399-402
- Hopkins, B.D.¹

36
- 84900300350
- Liang H., et al. Cell Metab. 2014, 19(5):836-848.
- (2014) Cell Metab. , vol.19 , Issue.5 , pp. 836-848
- Liang, H.¹

37
- 76849087968
- Xue B., et al. Biochim. Biophys. Acta 2010, 1804(4):996-1010.
- (2010) Biochim. Biophys. Acta , vol.1804 , Issue.4 , pp. 996-1010
- Xue, B.¹

38
- 58849102128
- Rahdar M., et al. Proc. Natl. Acad. Sci. U.S.A. 2009, 106(2):480-485.
- (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , Issue.2 , pp. 480-485
- Rahdar, M.¹

39
- 34548154756
- Odriozola L., et al. J. Biol. Chem. 2007, 282(32):23306-23315.
- (2007) J. Biol. Chem. , vol.282 , Issue.32 , pp. 23306-23315
- Odriozola, L.¹

40
- 0033946740
- Vazquez F., et al. Mol. Cell. Biol. 2000, 20(14):5010-5018.
- (2000) Mol. Cell. Biol. , vol.20 , Issue.14 , pp. 5010-5018
- Vazquez, F.¹

41
- 84880124600
- Bolduc D., et al. Elife (Cambridge) 2013, 2:e00691.
- (2013) Elife (Cambridge) , vol.2 , pp. e00691
- Bolduc, D.¹

42
- 0042232478
- Torres J., et al. J. Biol. Chem. 2003, 278(33):30652-30660.
- (2003) J. Biol. Chem. , vol.278 , Issue.33 , pp. 30652-30660
- Torres, J.¹

43
- 84897406995
- Papa A., et al. Cell 2014, 157(3):595-610.
- (2014) Cell , vol.157 , Issue.3 , pp. 595-610
- Papa, A.¹

44
- 55449114544
- Monsellier E., et al. PLoS Comput. Biol. 2008, 4(10):e1000199.
- (2008) PLoS Comput. Biol. , vol.4 , Issue.10 , pp. e1000199
- Monsellier, E.¹

45
- 0038272084
- Das S., Dixon J.E., Cho W. Proc. Natl. Acad. Sci. U.S.A. 2003, 100(13):7491-7496.
- (2003) Proc. Natl. Acad. Sci. U.S.A. , vol.100 , Issue.13 , pp. 7491-7496
- Das, S.¹ Dixon, J.E.² Cho, W.³

46
- 0035313805
- Wishart M.J., et al. Curr. Opin. Cell Biol. 2001, 13(2):172-181.
- (2001) Curr. Opin. Cell Biol. , vol.13 , Issue.2 , pp. 172-181
- Wishart, M.J.¹

47
- 84883471917
- Forman-Kay J.D., Mittag T. Structure 2013, 21(9):1492-1499.
- (2013) Structure , vol.21 , Issue.9 , pp. 1492-1499
- Forman-Kay, J.D.¹ Mittag, T.²

48
- 84868118460
- Moesa H.A., et al. Mol. BioSyst. 2012, 8(12):3262-3273.
- (2012) Mol. BioSyst. , vol.8 , Issue.12 , pp. 3262-3273
- Moesa, H.A.¹

49
- 84858267844
- Proteome-wide discovery of evolutionary conserved sequences in disordered regions
- Nguyen Ba A.N., et al. Proteome-wide discovery of evolutionary conserved sequences in disordered regions. Sci. Signal. 2012, 5(215):rs1.
- (2012) Sci. Signal. , vol.5 , Issue.215 , pp. rs1
- Nguyen Ba, A.N.¹

50
- 77249102545
- Brown C.J., Johnson A.K., Daughdrill G.W. Mol. Biol. Evol. 2010, 27(3):609-621.
- (2010) Mol. Biol. Evol. , vol.27 , Issue.3 , pp. 609-621
- Brown, C.J.¹ Johnson, A.K.² Daughdrill, G.W.³

51
- 84862987797
- Mosca R., Pache R.A., Aloy P. Mol. Cell. Proteomics 2012, 11(7). 10.1074/mcp.M111.014969.
- (2012) Mol. Cell. Proteomics , vol.11 , Issue.7
- Mosca, R.¹ Pache, R.A.² Aloy, P.³

52
- 79960555958
- Nilsson J., Grahn M., Wright A.P.H. Genome Biol. 2011, 12(7):r65. 10.1186/gb-2011-12-7-r65.
- (2011) Genome Biol. , vol.12 , Issue.7 , pp. r65
- Nilsson, J.¹ Grahn, M.² Wright, A.P.H.³

53
- 77953446523
- Stenson P.D., et al. Genome Med. 2009, 1(1):13.
- (2009) Genome Med. , vol.1 , Issue.1 , pp. 13
- Stenson, P.D.¹

54
- 77950395254
- Kuntzer J., et al. Hum. Mutat. 2010, 31(4):407-413.
- (2010) Hum. Mutat. , vol.31 , Issue.4 , pp. 407-413
- Kuntzer, J.¹

55
- 84866002291
- Cerami E., et al. Cancer Discov. 2012, 2(5):401-404.
- (2012) Cancer Discov. , vol.2 , Issue.5 , pp. 401-404
- Cerami, E.¹

56
- 85059583522
- J. Gao et al., Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal. 6 (2013) pl1.
- (2013) Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal , vol.6 , pp. l1
- Gao, J.¹

57
- 84897391926
- Hopkins B.D., et al. Trends Biochem. Sci. 2014, 39(4):183-190.
- (2014) Trends Biochem. Sci. , vol.39 , Issue.4 , pp. 183-190
- Hopkins, B.D.¹

58
- 84895926621
- Sun Z., et al. Cell Rep. 2014, 6(5):844-854.
- (2014) Cell Rep. , vol.6 , Issue.5 , pp. 844-854
- Sun, Z.¹

59
- 84964224329
- Fernandez S., Genis L., Torres-Aleman I. Oncogene 2013, 4114-4122.
- (2013) Oncogene , pp. 4114-4122
- Fernandez, S.¹ Genis, L.² Torres-Aleman, I.³

60
- 82655175478
- Pajkos M., et al. Mol. Biosyst. 2012, 8(1):296-307.
- (2012) Mol. Biosyst. , vol.8 , Issue.1 , pp. 296-307
- Pajkos, M.¹

61
- 4143107222
- Gunasekaran K., Tsai C.J., Nussinov R. J. Mol. Biol. 2004, 341(5):1327-1341.
- (2004) J. Mol. Biol. , vol.341 , Issue.5 , pp. 1327-1341
- Gunasekaran, K.¹ Tsai, C.J.² Nussinov, R.³

62
- 0037309985
- Gunasekaran K., et al. Trends Biochem. Sci. 2003, 28(2):81-85.
- (2003) Trends Biochem. Sci. , vol.28 , Issue.2 , pp. 81-85
- Gunasekaran, K.¹

63
- 0036468397
- Dyson H.J., Wright P.E. Curr. Opin. Struct. Biol. 2002, 12(1):54-60.
- (2002) Curr. Opin. Struct. Biol. , vol.12 , Issue.1 , pp. 54-60
- Dyson, H.J.¹ Wright, P.E.²

64
- 63549102895
- Fong J.H., et al. PLoS Comput. Biol. 2009, 5(3):e1000316.
- (2009) PLoS Comput. Biol. , vol.5 , Issue.3 , pp. e1000316
- Fong, J.H.¹

65
- 82655180372
- Fong J.H., Shoemaker B.A., Panchenko A.R. Mol. BioSyst. 2012, 8(1):320-326.
- (2012) Mol. BioSyst. , vol.8 , Issue.1 , pp. 320-326
- Fong, J.H.¹ Shoemaker, B.A.² Panchenko, A.R.³

66
- 23844473290
- Valiente M., et al. J. Biol. Chem. 2005, 280(32):28936-28943.
- (2005) J. Biol. Chem. , vol.280 , Issue.32 , pp. 28936-28943
- Valiente, M.¹

67
- 0034636038
- Wu X., et al. Proc. Natl. Acad. Sci. U.S.A. 2000, 97(8):4233-4238.
- (2000) Proc. Natl. Acad. Sci. U.S.A. , vol.97 , Issue.8 , pp. 4233-4238
- Wu, X.¹

68
- 33748456399
- Mohan A., et al. J. Mol. Biol. 2006, 362(5):1043-1059.
- (2006) J. Mol. Biol. , vol.362 , Issue.5 , pp. 1043-1059
- Mohan, A.¹

69
- 49549122501
- Diella F., et al. Front. Biosci. 2008, 13:6580-6603.
- (2008) Front. Biosci. , vol.13 , pp. 6580-6603
- Diella, F.¹

70
- 84859051901
- Dinkel H., et al. Nucleic Acids Res. 2012, 40(D1):D242-D251.
- (2012) Nucleic Acids Res. , vol.40 , Issue.D1 , pp. D242-D251
- Dinkel, H.¹

71
- 78650373804
- Barabasi A.L., Gulbahce N., Loscalzo J. Nat. Rev. Genet. 2011, 12(1):56-68.
- (2011) Nat. Rev. Genet. , vol.12 , Issue.1 , pp. 56-68
- Barabasi, A.L.¹ Gulbahce, N.² Loscalzo, J.³

72
- 84877580262
- Csermely P., et al. Pharmacol. Ther. 2013, 138(3):333-408.
- (2013) Pharmacol. Ther. , vol.138 , Issue.3 , pp. 333-408
- Csermely, P.¹

73
- 28444448000
- Wachi S., Yoneda K., Wu R. Bioinformatics 2005, 21(23):4205-4208.
- (2005) Bioinformatics , vol.21 , Issue.23 , pp. 4205-4208
- Wachi, S.¹ Yoneda, K.² Wu, R.³

74
- 33748706765
- Jonsson P.F., Bates P.A. Bioinformatics 2006, 22(18):2291-2297.
- (2006) Bioinformatics , vol.22 , Issue.18 , pp. 2291-2297
- Jonsson, P.F.¹ Bates, P.A.²

75
- 33751017706
- Xu J., Li Y. Bioinformatics 2006, 22(22):2800-2805.
- (2006) Bioinformatics , vol.22 , Issue.22 , pp. 2800-2805
- Xu, J.¹ Li, Y.²

76
- 34247623628
- Zhu X., Gerstein M., Snyder M. Genes Dev. 2007, 21(9):1010-1024.
- (2007) Genes Dev. , vol.21 , Issue.9 , pp. 1010-1024
- Zhu, X.¹ Gerstein, M.² Snyder, M.³

77
- 79952321999
- Gitter A., et al. Nucleic Acids Res. 2011, 39(4):e22.
- (2011) Nucleic Acids Res. , vol.39 , Issue.4 , pp. e22
- Gitter, A.¹

78
- 33748074139
- Haynes C., et al. PLoS Comput. Biol. 2006, 2(8):e100.
- (2006) PLoS Comput. Biol. , vol.2 , Issue.8 , pp. e100
- Haynes, C.¹

79
- 0035823264
- Wagner A., Fell D.A. Proc. Biol. Sci. 2001, 268(1478):1803-1810.
- (2001) Proc. Biol. Sci. , vol.268 , Issue.1478 , pp. 1803-1810
- Wagner, A.¹ Fell, D.A.²

80
- 84859755905
- Fata J.E., et al. Int. J. Cell Biol. 2012, 2012:379685.
- (2012) Int. J. Cell Biol. , vol.2012 , pp. 379685
- Fata, J.E.¹

81
- 84903957093
- Uversky V.N., et al. Chem. Rev. 2014, 114(13):6844-6879.
- (2014) Chem. Rev. , vol.114 , Issue.13 , pp. 6844-6879
- Uversky, V.N.¹

82
- 84902129859
- Worby C.A., Dixon J.E. Annu. Rev. Biochem. 2014, 83:641-669.
- (2014) Annu. Rev. Biochem. , vol.83 , pp. 641-669
- Worby, C.A.¹ Dixon, J.E.²

83
- 84897460431
- Kreis P., et al. Front. Mol. Neurosci. 2014, 7:23.
- (2014) Front. Mol. Neurosci. , vol.7 , pp. 23
- Kreis, P.¹

84
- 33644834046
- Kim R.H., Mak T.W. Br. J. Cancer 2006, 94(5):620-624.
- (2006) Br. J. Cancer , vol.94 , Issue.5 , pp. 620-624
- Kim, R.H.¹ Mak, T.W.²

85
- 84875270373
- Takeuchi K., et al. Proc. Natl. Acad. Sci. U.S.A. 2013, 110(12):4738-4743.
- (2013) Proc. Natl. Acad. Sci. U.S.A. , vol.110 , Issue.12 , pp. 4738-4743
- Takeuchi, K.¹

86
- 77957729824
- Peyrou M., Bourgoin L., Foti M. World J. Gastroenterol. 2010, 16(37):4627-4633.
- (2010) World J. Gastroenterol. , vol.16 , Issue.37 , pp. 4627-4633
- Peyrou, M.¹ Bourgoin, L.² Foti, M.³

87
- 84860722516
- Sanz-Pamplona R., et al. Clin. Transl. Oncol. 2012, 14(1):3-14.
- (2012) Clin. Transl. Oncol. , vol.14 , Issue.1 , pp. 3-14
- Sanz-Pamplona, R.¹

88
- 84885105947
- Kosol S., et al. Molecules 2013, 18(9):10802-10828.
- (2013) Molecules , vol.18 , Issue.9 , pp. 10802-10828
- Kosol, S.¹

89
- 0242490780
- Shannon P., et al. Genome Res. 2003, 13(11):2498-2504.
- (2003) Genome Res. , vol.13 , Issue.11 , pp. 2498-2504
- Shannon, P.¹

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.