-
2
-
-
84873320525
-
Mechanisms of programmed DNA lesions and genomic instability in the immune system
-
F.W. Alt, Y. Zhang, F.L. Meng, C. Guo, and B. Schwer Mechanisms of programmed DNA lesions and genomic instability in the immune system Cell 152 2013 417 429
-
(2013)
Cell
, vol.152
, pp. 417-429
-
-
Alt, F.W.1
Zhang, Y.2
Meng, F.L.3
Guo, C.4
Schwer, B.5
-
3
-
-
84866906311
-
De novo CNV formation in mouse embryonic stem cells occurs in the absence of Xrcc4-dependent nonhomologous end joining
-
M.F. Arlt, S. Rajendran, S.R. Birkeland, T.E. Wilson, and T.W. Glover De novo CNV formation in mouse embryonic stem cells occurs in the absence of Xrcc4-dependent nonhomologous end joining PLoS Genet. 8 2012 e1002981
-
(2012)
PLoS Genet.
, vol.8
, pp. e1002981
-
-
Arlt, M.F.1
Rajendran, S.2
Birkeland, S.R.3
Wilson, T.E.4
Glover, T.W.5
-
4
-
-
84873310832
-
Identification of early replicating fragile sites that contribute to genome instability
-
J.H. Barlow, R.B. Faryabi, E. Callén, N. Wong, A. Malhowski, H.T. Chen, G. Gutierrez-Cruz, H.W. Sun, P. McKinnon, G. Wright, and et al. Identification of early replicating fragile sites that contribute to genome instability Cell 152 2013 620 632
-
(2013)
Cell
, vol.152
, pp. 620-632
-
-
Barlow, J.H.1
Faryabi, R.B.2
Callén, E.3
Wong, N.4
Malhowski, A.5
Chen, H.T.6
Gutierrez-Cruz, G.7
Sun, H.W.8
McKinnon, P.9
Wright, G.10
-
5
-
-
0032585526
-
Targeted disruption of the gene encoding DNA ligase IV leads to lethality in embryonic mice
-
D.E. Barnes, G. Stamp, I. Rosewell, A. Denzel, and T. Lindahl Targeted disruption of the gene encoding DNA ligase IV leads to lethality in embryonic mice Curr. Biol. 8 1998 1395 1398
-
(1998)
Curr. Biol.
, vol.8
, pp. 1395-1398
-
-
Barnes, D.E.1
Stamp, G.2
Rosewell, I.3
Denzel, A.4
Lindahl, T.5
-
6
-
-
84867386682
-
Classical and alternative end-joining pathways for repair of lymphocyte-specific and general DNA double-strand breaks
-
C. Boboila, F.W. Alt, and B. Schwer Classical and alternative end-joining pathways for repair of lymphocyte-specific and general DNA double-strand breaks Adv. Immunol. 116 2012 1 49
-
(2012)
Adv. Immunol.
, vol.116
, pp. 1-49
-
-
Boboila, C.1
Alt, F.W.2
Schwer, B.3
-
7
-
-
77956147463
-
Characterization of FRA7B, a human common fragile site mapped at the 7p chromosome terminal region
-
N. Bosco, F. Pelliccia, and A. Rocchi Characterization of FRA7B, a human common fragile site mapped at the 7p chromosome terminal region Cancer Genet. Cytogenet. 202 2010 47 52
-
(2010)
Cancer Genet. Cytogenet.
, vol.202
, pp. 47-52
-
-
Bosco, N.1
Pelliccia, F.2
Rocchi, A.3
-
8
-
-
80053558376
-
Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells
-
R. Chiarle, Y. Zhang, R.L. Frock, S.M. Lewis, B. Molinie, Y.J. Ho, D.R. Myers, V.W. Choi, M. Compagno, D.J. Malkin, and et al. Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells Cell 147 2011 107 119
-
(2011)
Cell
, vol.147
, pp. 107-119
-
-
Chiarle, R.1
Zhang, Y.2
Frock, R.L.3
Lewis, S.M.4
Molinie, B.5
Ho, Y.J.6
Myers, D.R.7
Choi, V.W.8
Compagno, M.9
Malkin, D.J.10
-
9
-
-
57849109058
-
Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
-
L.J. Core, J.J. Waterfall, and J.T. Lis Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters Science 322 2008 1845 1848
-
(2008)
Science
, vol.322
, pp. 1845-1848
-
-
Core, L.J.1
Waterfall, J.J.2
Lis, J.T.3
-
10
-
-
0037136318
-
Evidence for replicative repair of DNA double-strand breaks leading to oncogenic translocation and gene amplification
-
M.J. Difilippantonio, S. Petersen, H.T. Chen, R. Johnson, M. Jasin, R. Kanaar, T. Ried, and A. Nussenzweig Evidence for replicative repair of DNA double-strand breaks leading to oncogenic translocation and gene amplification J. Exp. Med. 196 2002 469 480
-
(2002)
J. Exp. Med.
, vol.196
, pp. 469-480
-
-
Difilippantonio, M.J.1
Petersen, S.2
Chen, H.T.3
Johnson, R.4
Jasin, M.5
Kanaar, R.6
Ried, T.7
Nussenzweig, A.8
-
11
-
-
84940942139
-
Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching
-
J. Dong, R.A. Panchakshari, T. Zhang, Y. Zhang, J. Hu, S.A. Volpi, R.M. Meyers, Y.J. Ho, Z. Du, D.F. Robbiani, and et al. Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching Nature 525 2015 134 139
-
(2015)
Nature
, vol.525
, pp. 134-139
-
-
Dong, J.1
Panchakshari, R.A.2
Zhang, T.3
Zhang, Y.4
Hu, J.5
Volpi, S.A.6
Meyers, R.M.7
Ho, Y.J.8
Du, Z.9
Robbiani, D.F.10
-
13
-
-
84904565384
-
Mobile DNA elements in the generation of diversity and complexity in the brain
-
J.A. Erwin, M.C. Marchetto, and F.H. Gage Mobile DNA elements in the generation of diversity and complexity in the brain Nat. Rev. Neurosci. 15 2014 497 506
-
(2014)
Nat. Rev. Neurosci.
, vol.15
, pp. 497-506
-
-
Erwin, J.A.1
Marchetto, M.C.2
Gage, F.H.3
-
14
-
-
0025056930
-
Identification of a chromosome 18q gene that is altered in colorectal cancers
-
E.R. Fearon, K.R. Cho, J.M. Nigro, S.E. Kern, J.W. Simons, J.M. Ruppert, S.R. Hamilton, A.C. Preisinger, G. Thomas, K.W. Kinzler, and et al. Identification of a chromosome 18q gene that is altered in colorectal cancers Science 247 1990 49 56
-
(1990)
Science
, vol.247
, pp. 49-56
-
-
Fearon, E.R.1
Cho, K.R.2
Nigro, J.M.3
Kern, S.E.4
Simons, J.W.5
Ruppert, J.M.6
Hamilton, S.R.7
Preisinger, A.C.8
Thomas, G.9
Kinzler, K.W.10
-
15
-
-
0033634973
-
DNA ligase IV deficiency in mice leads to defective neurogenesis and embryonic lethality via the p53 pathway
-
K.M. Frank, N.E. Sharpless, Y. Gao, J.M. Sekiguchi, D.O. Ferguson, C. Zhu, J.P. Manis, J. Horner, R.A. DePinho, and F.W. Alt DNA ligase IV deficiency in mice leads to defective neurogenesis and embryonic lethality via the p53 pathway Mol. Cell 5 2000 993 1002
-
(2000)
Mol. Cell
, vol.5
, pp. 993-1002
-
-
Frank, K.M.1
Sharpless, N.E.2
Gao, Y.3
Sekiguchi, J.M.4
Ferguson, D.O.5
Zhu, C.6
Manis, J.P.7
Horner, J.8
DePinho, R.A.9
Alt, F.W.10
-
16
-
-
84923275611
-
Genome-wide detection of DNA double-stranded breaks induced by engineered nucleases
-
R.L. Frock, J. Hu, R.M. Meyers, Y.J. Ho, E. Kii, and F.W. Alt Genome-wide detection of DNA double-stranded breaks induced by engineered nucleases Nat. Biotechnol. 33 2015 179 186
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 179-186
-
-
Frock, R.L.1
Hu, J.2
Meyers, R.M.3
Ho, Y.J.4
Kii, E.5
Alt, F.W.6
-
17
-
-
84922080153
-
Very large common fragile site genes and their potential role in cancer development
-
G. Gao, and D.I. Smith Very large common fragile site genes and their potential role in cancer development Cell. Mol. Life Sci. 71 2014 4601 4615
-
(2014)
Cell. Mol. Life Sci.
, vol.71
, pp. 4601-4615
-
-
Gao, G.1
Smith, D.I.2
-
18
-
-
0032417640
-
A critical role for DNA end-joining proteins in both lymphogenesis and neurogenesis
-
Y. Gao, Y. Sun, K.M. Frank, P. Dikkes, Y. Fujiwara, K.J. Seidl, J.M. Sekiguchi, G.A. Rathbun, W. Swat, J. Wang, and et al. A critical role for DNA end-joining proteins in both lymphogenesis and neurogenesis Cell 95 1998 891 902
-
(1998)
Cell
, vol.95
, pp. 891-902
-
-
Gao, Y.1
Sun, Y.2
Frank, K.M.3
Dikkes, P.4
Fujiwara, Y.5
Seidl, K.J.6
Sekiguchi, J.M.7
Rathbun, G.A.8
Swat, W.9
Wang, J.10
-
19
-
-
0034690249
-
Interplay of p53 and DNA-repair protein XRCC4 in tumorigenesis, genomic stability and development
-
Y. Gao, D.O. Ferguson, W. Xie, J.P. Manis, J. Sekiguchi, K.M. Frank, J. Chaudhuri, J. Horner, R.A. DePinho, and F.W. Alt Interplay of p53 and DNA-repair protein XRCC4 in tumorigenesis, genomic stability and development Nature 404 2000 897 900
-
(2000)
Nature
, vol.404
, pp. 897-900
-
-
Gao, Y.1
Ferguson, D.O.2
Xie, W.3
Manis, J.P.4
Sekiguchi, J.5
Frank, K.M.6
Chaudhuri, J.7
Horner, J.8
DePinho, R.A.9
Alt, F.W.10
-
20
-
-
79959267641
-
Unique and redundant functions of ATM and DNA-PKcs during V(D)J recombination
-
E.J. Gapud, and B.P. Sleckman Unique and redundant functions of ATM and DNA-PKcs during V(D)J recombination Cell Cycle 10 2011 1928 1935
-
(2011)
Cell Cycle
, vol.10
, pp. 1928-1935
-
-
Gapud, E.J.1
Sleckman, B.P.2
-
21
-
-
0021278143
-
DNA polymerase alpha inhibition by aphidicolin induces gaps and breaks at common fragile sites in human chromosomes
-
T.W. Glover, C. Berger, J. Coyle, and B. Echo DNA polymerase alpha inhibition by aphidicolin induces gaps and breaks at common fragile sites in human chromosomes Hum. Genet. 67 1984 136 142
-
(1984)
Hum. Genet.
, vol.67
, pp. 136-142
-
-
Glover, T.W.1
Berger, C.2
Coyle, J.3
Echo, B.4
-
22
-
-
33749384368
-
Common fragile sites are conserved features of human and mouse chromosomes and relate to large active genes
-
A. Helmrich, K. Stout-Weider, K. Hermann, E. Schrock, and T. Heiden Common fragile sites are conserved features of human and mouse chromosomes and relate to large active genes Genome Res. 16 2006 1222 1230
-
(2006)
Genome Res.
, vol.16
, pp. 1222-1230
-
-
Helmrich, A.1
Stout-Weider, K.2
Hermann, K.3
Schrock, E.4
Heiden, T.5
-
23
-
-
84255198334
-
Collisions between replication and transcription complexes cause common fragile site instability at the longest human genes
-
A. Helmrich, M. Ballarino, and L. Tora Collisions between replication and transcription complexes cause common fragile site instability at the longest human genes Mol. Cell 44 2011 966 977
-
(2011)
Mol. Cell
, vol.44
, pp. 966-977
-
-
Helmrich, A.1
Ballarino, M.2
Tora, L.3
-
24
-
-
54949085778
-
Global reorganization of replication domains during embryonic stem cell differentiation
-
I. Hiratani, T. Ryba, M. Itoh, T. Yokochi, M. Schwaiger, C.W. Chang, Y. Lyou, T.M. Townes, D. Schübeler, and D.M. Gilbert Global reorganization of replication domains during embryonic stem cell differentiation PLoS Biol. 6 2008 e245
-
(2008)
PLoS Biol.
, vol.6
, pp. e245
-
-
Hiratani, I.1
Ryba, T.2
Itoh, M.3
Yokochi, T.4
Schwaiger, M.5
Chang, C.W.6
Lyou, Y.7
Townes, T.M.8
Schübeler, D.9
Gilbert, D.M.10
-
25
-
-
84946200292
-
Chromosomal Loop Domains Direct the Recombination of Antigen Receptor Genes
-
J. Hu, Y. Zhang, L. Zhao, R.L. Frock, Z. Du, R.M. Meyers, F.L. Meng, D.G. Schatz, and F.W. Alt Chromosomal Loop Domains Direct the Recombination of Antigen Receptor Genes Cell 163 2015 947 959
-
(2015)
Cell
, vol.163
, pp. 947-959
-
-
Hu, J.1
Zhang, Y.2
Zhao, L.3
Frock, R.L.4
Du, Z.5
Meyers, R.M.6
Meng, F.L.7
Schatz, D.G.8
Alt, F.W.9
-
26
-
-
33745255099
-
A topoisomerase IIbeta-mediated dsDNA break required for regulated transcription
-
B.G. Ju, V.V. Lunyak, V. Perissi, I. Garcia-Bassets, D.W. Rose, C.K. Glass, and M.G. Rosenfeld A topoisomerase IIbeta-mediated dsDNA break required for regulated transcription Science 312 2006 1798 1802
-
(2006)
Science
, vol.312
, pp. 1798-1802
-
-
Ju, B.G.1
Lunyak, V.V.2
Perissi, V.3
Garcia-Bassets, I.4
Rose, D.W.5
Glass, C.K.6
Rosenfeld, M.G.7
-
27
-
-
84857191660
-
Transcription as a source of genome instability
-
N. Kim, and S. Jinks-Robertson Transcription as a source of genome instability Nat. Rev. Genet. 13 2012 204 214
-
(2012)
Nat. Rev. Genet.
, vol.13
, pp. 204-214
-
-
Kim, N.1
Jinks-Robertson, S.2
-
28
-
-
80053502216
-
Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes
-
I.A. Klein, W. Resch, M. Jankovic, T. Oliveira, A. Yamane, H. Nakahashi, M. Di Virgilio, A. Bothmer, A. Nussenzweig, D.F. Robbiani, and et al. Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes Cell 147 2011 95 106
-
(2011)
Cell
, vol.147
, pp. 95-106
-
-
Klein, I.A.1
Resch, W.2
Jankovic, M.3
Oliveira, T.4
Yamane, A.5
Nakahashi, H.6
Di Virgilio, M.7
Bothmer, A.8
Nussenzweig, A.9
Robbiani, D.F.10
-
29
-
-
0021047844
-
Transposition and amplification of oncogene-related sequences in human neuroblastomas
-
N.E. Kohl, N. Kanda, R.R. Schreck, G. Bruns, S.A. Latt, F. Gilbert, and F.W. Alt Transposition and amplification of oncogene-related sequences in human neuroblastomas Cell 35 1983 359 367
-
(1983)
Cell
, vol.35
, pp. 359-367
-
-
Kohl, N.E.1
Kanda, N.2
Schreck, R.R.3
Bruns, G.4
Latt, S.A.5
Gilbert, F.6
Alt, F.W.7
-
30
-
-
0036266065
-
The common fragile site FRA16D and its associated gene WWOX are highly conserved in the mouse at Fra8E1
-
K.A. Krummel, S.R. Denison, E. Calhoun, L.A. Phillips, and D.I. Smith The common fragile site FRA16D and its associated gene WWOX are highly conserved in the mouse at Fra8E1 Genes Chromosomes Cancer 34 2002 154 167
-
(2002)
Genes Chromosomes Cancer
, vol.34
, pp. 154-167
-
-
Krummel, K.A.1
Denison, S.R.2
Calhoun, E.3
Phillips, L.A.4
Smith, D.I.5
-
31
-
-
82955195401
-
Molecular profiling of common fragile sites in human fibroblasts
-
B. Le Tallec, B. Dutrillaux, A.M. Lachages, G.A. Millot, O. Brison, and M. Debatisse Molecular profiling of common fragile sites in human fibroblasts Nat. Struct. Mol. Biol. 18 2011 1421 1423
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 1421-1423
-
-
Le Tallec, B.1
Dutrillaux, B.2
Lachages, A.M.3
Millot, G.A.4
Brison, O.5
Debatisse, M.6
-
32
-
-
84881615685
-
Common fragile site profiling in epithelial and erythroid cells reveals that most recurrent cancer deletions lie in fragile sites hosting large genes
-
B. Le Tallec, G.A. Millot, M.E. Blin, O. Brison, B. Dutrillaux, and M. Debatisse Common fragile site profiling in epithelial and erythroid cells reveals that most recurrent cancer deletions lie in fragile sites hosting large genes Cell Rep. 4 2013 420 428
-
(2013)
Cell Rep.
, vol.4
, pp. 420-428
-
-
Le Tallec, B.1
Millot, G.A.2
Blin, M.E.3
Brison, O.4
Dutrillaux, B.5
Debatisse, M.6
-
33
-
-
84922002544
-
Updating the mechanisms of common fragile site instability: How to reconcile the different views?
-
B. Le Tallec, S. Koundrioukoff, T. Wilhelm, A. Letessier, O. Brison, and M. Debatisse Updating the mechanisms of common fragile site instability: how to reconcile the different views? Cell. Mol. Life Sci. 71 2014 4489 4494
-
(2014)
Cell. Mol. Life Sci.
, vol.71
, pp. 4489-4494
-
-
Le Tallec, B.1
Koundrioukoff, S.2
Wilhelm, T.3
Letessier, A.4
Brison, O.5
Debatisse, M.6
-
34
-
-
0037112505
-
DNA ligase IV suppresses medulloblastoma formation
-
Y. Lee, and P.J. McKinnon DNA ligase IV suppresses medulloblastoma formation Cancer Res. 62 2002 6395 6399
-
(2002)
Cancer Res.
, vol.62
, pp. 6395-6399
-
-
Lee, Y.1
McKinnon, P.J.2
-
35
-
-
77953229115
-
The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway
-
M.R. Lieber The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway Annu. Rev. Biochem. 79 2010 181 211
-
(2010)
Annu. Rev. Biochem.
, vol.79
, pp. 181-211
-
-
Lieber, M.R.1
-
36
-
-
84931577486
-
Activity-Induced DNA Breaks Govern the Expression of Neuronal Early-Response Genes
-
R. Madabhushi, F. Gao, A.R. Pfenning, L. Pan, S. Yamakawa, J. Seo, R. Rueda, T.X. Phan, H. Yamakawa, P.C. Pao, and et al. Activity-Induced DNA Breaks Govern the Expression of Neuronal Early-Response Genes Cell 161 2015 1592 1605
-
(2015)
Cell
, vol.161
, pp. 1592-1605
-
-
Madabhushi, R.1
Gao, F.2
Pfenning, A.R.3
Pan, L.4
Yamakawa, S.5
Seo, J.6
Rueda, R.7
Phan, T.X.8
Yamakawa, H.9
Pao, P.C.10
-
37
-
-
84887315590
-
Mosaic copy number variation in human neurons
-
M.J. McConnell, M.R. Lindberg, K.J. Brennand, J.C. Piper, T. Voet, C. Cowing-Zitron, S. Shumilina, R.S. Lasken, J.R. Vermeesch, I.M. Hall, and F.H. Gage Mosaic copy number variation in human neurons Science 342 2013 632 637
-
(2013)
Science
, vol.342
, pp. 632-637
-
-
McConnell, M.J.1
Lindberg, M.R.2
Brennand, K.J.3
Piper, J.C.4
Voet, T.5
Cowing-Zitron, C.6
Shumilina, S.7
Lasken, R.S.8
Vermeesch, J.R.9
Hall, I.M.10
Gage, F.H.11
-
38
-
-
84886867688
-
Maintaining genome stability in the nervous system
-
P.J. McKinnon Maintaining genome stability in the nervous system Nat. Neurosci. 16 2013 1523 1529
-
(2013)
Nat. Neurosci.
, vol.16
, pp. 1523-1529
-
-
McKinnon, P.J.1
-
39
-
-
84919903836
-
Convergent transcription at intragenic super-enhancers targets AID-initiated genomic instability
-
F.L. Meng, Z. Du, A. Federation, J. Hu, Q. Wang, K.R. Kieffer-Kwon, R.M. Meyers, C. Amor, C.R. Wasserman, D. Neuberg, and et al. Convergent transcription at intragenic super-enhancers targets AID-initiated genomic instability Cell 159 2014 1538 1548
-
(2014)
Cell
, vol.159
, pp. 1538-1548
-
-
Meng, F.L.1
Du, Z.2
Federation, A.3
Hu, J.4
Wang, Q.5
Kieffer-Kwon, K.R.6
Meyers, R.M.7
Amor, C.8
Wasserman, C.R.9
Neuberg, D.10
-
40
-
-
33745593721
-
Generation of neuronal variability and complexity
-
A.R. Muotri, and F.H. Gage Generation of neuronal variability and complexity Nature 441 2006 1087 1093
-
(2006)
Nature
, vol.441
, pp. 1087-1093
-
-
Muotri, A.R.1
Gage, F.H.2
-
41
-
-
84864425646
-
Subgroup-specific structural variation across 1,000 medulloblastoma genomes
-
P.A. Northcott, D.J. Shih, J. Peacock, L. Garzia, A.S. Morrissy, T. Zichner, A.M. Stütz, A. Korshunov, J. Reimand, S.E. Schumacher, and et al. Subgroup-specific structural variation across 1,000 medulloblastoma genomes Nature 488 2012 49 56
-
(2012)
Nature
, vol.488
, pp. 49-56
-
-
Northcott, P.A.1
Shih, D.J.2
Peacock, J.3
Garzia, L.4
Morrissy, A.S.5
Zichner, T.6
Stütz, A.M.7
Korshunov, A.8
Reimand, J.9
Schumacher, S.E.10
-
42
-
-
84924384551
-
Mechanisms of ATM Activation
-
T.T. Paull Mechanisms of ATM Activation Annu. Rev. Biochem. 84 2015 711 738
-
(2015)
Annu. Rev. Biochem.
, vol.84
, pp. 711-738
-
-
Paull, T.T.1
-
43
-
-
84879756120
-
Somatic mutation, genomic variation, and neurological disease
-
A. Poduri, G.D. Evrony, X. Cai, and C.A. Walsh Somatic mutation, genomic variation, and neurological disease Science 341 2013 1237758
-
(2013)
Science
, vol.341
, pp. 1237758
-
-
Poduri, A.1
Evrony, G.D.2
Cai, X.3
Walsh, C.A.4
-
44
-
-
84911478490
-
Topologically associating domains are stable units of replication-timing regulation
-
B.D. Pope, T. Ryba, V. Dileep, F. Yue, W. Wu, O. Denas, D.L. Vera, Y. Wang, R.S. Hansen, T.K. Canfield, and et al. Topologically associating domains are stable units of replication-timing regulation Nature 515 2014 402 405
-
(2014)
Nature
, vol.515
, pp. 402-405
-
-
Pope, B.D.1
Ryba, T.2
Dileep, V.3
Yue, F.4
Wu, W.5
Denas, O.6
Vera, D.L.7
Wang, Y.8
Hansen, R.S.9
Canfield, T.K.10
-
45
-
-
84862907577
-
Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations
-
T. Rausch, D.T. Jones, M. Zapatka, A.M. Stütz, T. Zichner, J. Weischenfeldt, N. Jäger, M. Remke, D. Shih, P.A. Northcott, and et al. Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations Cell 148 2012 59 71
-
(2012)
Cell
, vol.148
, pp. 59-71
-
-
Rausch, T.1
Jones, D.T.2
Zapatka, M.3
Stütz, A.M.4
Zichner, T.5
Weischenfeldt, J.6
Jäger, N.7
Remke, M.8
Shih, D.9
Northcott, P.A.10
-
46
-
-
78651271733
-
Integrative genomics viewer
-
J.T. Robinson, H. Thorvaldsdóttir, W. Winckler, M. Guttman, E.S. Lander, G. Getz, and J.P. Mesirov Integrative genomics viewer Nat. Biotechnol. 29 2011 24 26
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 24-26
-
-
Robinson, J.T.1
Thorvaldsdóttir, H.2
Winckler, W.3
Guttman, M.4
Lander, E.S.5
Getz, G.6
Mesirov, J.P.7
-
47
-
-
77952994784
-
Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types
-
T. Ryba, I. Hiratani, J. Lu, M. Itoh, M. Kulik, J. Zhang, T.C. Schulz, A.J. Robins, S. Dalton, and D.M. Gilbert Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types Genome Res. 20 2010 761 770
-
(2010)
Genome Res.
, vol.20
, pp. 761-770
-
-
Ryba, T.1
Hiratani, I.2
Lu, J.3
Itoh, M.4
Kulik, M.5
Zhang, J.6
Schulz, T.C.7
Robins, A.J.8
Dalton, S.9
Gilbert, D.M.10
-
48
-
-
84911915086
-
Molecular characterization of common fragile sites as a strategy to discover cancer susceptibility genes
-
L. Savelyeva, and L.M. Brueckner Molecular characterization of common fragile sites as a strategy to discover cancer susceptibility genes Cell. Mol. Life Sci. 71 2014 4561 4575
-
(2014)
Cell. Mol. Life Sci.
, vol.71
, pp. 4561-4575
-
-
Savelyeva, L.1
Brueckner, L.M.2
-
49
-
-
84958205734
-
Transcription-associated processes cause DNA double-strand breaks and translocations in neural stem/progenitor cells
-
Published online February 12, 2016
-
B. Schwer, P. Wei, A.N. Chang, J. Kao, Z. Du, R.M. Meyers, and F.W. Alt Transcription-associated processes cause DNA double-strand breaks and translocations in neural stem/progenitor cells Proc. Natl. Acad. Sci. USA. 2016 10.1073/pnas.1525564113 Published online February 12, 2016
-
(2016)
Proc. Natl. Acad. Sci. USA.
-
-
Schwer, B.1
Wei, P.2
Chang, A.N.3
Kao, J.4
Du, Z.5
Meyers, R.M.6
Alt, F.W.7
-
50
-
-
62249199182
-
ReplicationDomain: A visualization tool and comparative database for genome-wide replication timing data
-
N. Weddington, A. Stuy, I. Hiratani, T. Ryba, T. Yokochi, and D.M. Gilbert ReplicationDomain: a visualization tool and comparative database for genome-wide replication timing data BMC Bioinformatics 9 2008 530
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 530
-
-
Weddington, N.1
Stuy, A.2
Hiratani, I.3
Ryba, T.4
Yokochi, T.5
Gilbert, D.M.6
-
51
-
-
33646550838
-
XRCC4 suppresses medulloblastomas with recurrent translocations in p53-deficient mice
-
C.T. Yan, D. Kaushal, M. Murphy, Y. Zhang, A. Datta, C. Chen, B. Monroe, G. Mostoslavsky, K. Coakley, Y. Gao, and et al. XRCC4 suppresses medulloblastomas with recurrent translocations in p53-deficient mice Proc. Natl. Acad. Sci. USA 103 2006 7378 7383
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 7378-7383
-
-
Yan, C.T.1
Kaushal, D.2
Murphy, M.3
Zhang, Y.4
Datta, A.5
Chen, C.6
Monroe, B.7
Mostoslavsky, G.8
Coakley, K.9
Gao, Y.10
-
52
-
-
67650711619
-
A clustering approach for identification of enriched domains from histone modification ChIP-Seq data
-
C. Zang, D.E. Schones, C. Zeng, K. Cui, K. Zhao, and W. Peng A clustering approach for identification of enriched domains from histone modification ChIP-Seq data Bioinformatics 25 2009 1952 1958
-
(2009)
Bioinformatics
, vol.25
, pp. 1952-1958
-
-
Zang, C.1
Schones, D.E.2
Zeng, C.3
Cui, K.4
Zhao, K.5
Peng, W.6
-
53
-
-
33846606769
-
Antibody class switching mediated by yeast endonuclease-generated DNA breaks
-
A.A. Zarrin, C. Del Vecchio, E. Tseng, M. Gleason, P. Zarin, M. Tian, and F.W. Alt Antibody class switching mediated by yeast endonuclease-generated DNA breaks Science 315 2007 377 381
-
(2007)
Science
, vol.315
, pp. 377-381
-
-
Zarrin, A.A.1
Del Vecchio, C.2
Tseng, E.3
Gleason, M.4
Zarin, P.5
Tian, M.6
Alt, F.W.7
-
54
-
-
84862778059
-
Spatial organization of the mouse genome and its role in recurrent chromosomal translocations
-
Y. Zhang, R.P. McCord, Y.J. Ho, B.R. Lajoie, D.G. Hildebrand, A.C. Simon, M.S. Becker, F.W. Alt, and J. Dekker Spatial organization of the mouse genome and its role in recurrent chromosomal translocations Cell 148 2012 908 921
-
(2012)
Cell
, vol.148
, pp. 908-921
-
-
Zhang, Y.1
McCord, R.P.2
Ho, Y.J.3
Lajoie, B.R.4
Hildebrand, D.G.5
Simon, A.C.6
Becker, M.S.7
Alt, F.W.8
Dekker, J.9
-
55
-
-
0037188898
-
Unrepaired DNA breaks in p53-deficient cells lead to oncogenic gene amplification subsequent to translocations
-
C. Zhu, K.D. Mills, D.O. Ferguson, C. Lee, J. Manis, J. Fleming, Y. Gao, C.C. Morton, and F.W. Alt Unrepaired DNA breaks in p53-deficient cells lead to oncogenic gene amplification subsequent to translocations Cell 109 2002 811 821
-
(2002)
Cell
, vol.109
, pp. 811-821
-
-
Zhu, C.1
Mills, K.D.2
Ferguson, D.O.3
Lee, C.4
Manis, J.5
Fleming, J.6
Gao, Y.7
Morton, C.C.8
Alt, F.W.9
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