-
1
-
-
79551594605
-
Protein kinases: evolution of dynamic regulatory proteins
-
Taylor SS, Kornev AP, Protein kinases: evolution of dynamic regulatory proteins. Trends Biochem Sci. 2011;36: 65–77. doi: 10.1016/j.tibs.2010.09.006 20971646
-
(2011)
Trends Biochem Sci
, vol.36
, pp. 65-77
-
-
Taylor, S.S.1
Kornev, A.P.2
-
2
-
-
48649087006
-
Cyclic AMP: master regulator of innate immune cell function
-
Serezani CH, Ballinger MN, Aronoff DM, Peters-Golden M, Cyclic AMP: master regulator of innate immune cell function. Am J Respir Cell Mol Biol. 2008;39: 127–132. doi: 10.1165/rcmb.2008-0091TR 18323530
-
(2008)
Am J Respir Cell Mol Biol
, vol.39
, pp. 127-132
-
-
Serezani, C.H.1
Ballinger, M.N.2
Aronoff, D.M.3
Peters-Golden, M.4
-
3
-
-
0036607064
-
Crosstalk between cAMP and MAP kinase signaling in the regulation of cell proliferation
-
Stork PJ, Schmitt JM, Crosstalk between cAMP and MAP kinase signaling in the regulation of cell proliferation. Trends Cell Biol. 2002;12: 258–266. 12074885
-
(2002)
Trends Cell Biol
, vol.12
, pp. 258-266
-
-
Stork, P.J.1
Schmitt, J.M.2
-
4
-
-
0035413602
-
Physiological substrates of cAMP-dependent protein kinase
-
Shabb JB, Physiological substrates of cAMP-dependent protein kinase. Chem Rev. 2001;101: 2381–2411.
-
(2001)
Chem Rev
, vol.101
, pp. 2381-2411
-
-
Shabb, J.B.1
-
5
-
-
0029020282
-
Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification
-
Hanks SK, Hunter T, Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J. 1995;9: 576–596. 7768349
-
(1995)
FASEB J
, vol.9
, pp. 576-596
-
-
Hanks, S.K.1
Hunter, T.2
-
6
-
-
84925432611
-
Dysfunctional conformational dynamics of protein kinase A induced by a lethal mutant of phospholamban hinder phosphorylation
-
Kim J, Masterson LR, Cembran A, Verardi R, Shi L, Gao J, et al. Dysfunctional conformational dynamics of protein kinase A induced by a lethal mutant of phospholamban hinder phosphorylation. Proc Natl Acad Sci U S A. 2015;112: 3716–21. doi: 10.1073/pnas.1502299112 25775607
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 3716-3721
-
-
Kim, J.1
Masterson, L.R.2
Cembran, A.3
Verardi, R.4
Shi, L.5
Gao, J.6
-
7
-
-
84914171432
-
Synchronous opening and closing motions are essential for cAMP-dependent protein kinase A signaling
-
Srivastava AK, McDonald LR, Cembran A, Kim J, Masterson LR, McClendon CL, et al. Synchronous opening and closing motions are essential for cAMP-dependent protein kinase A signaling. Structure. 2014;22: 1735–43. doi: 10.1016/j.str.2014.09.010 25458836
-
(2014)
Structure
, vol.22
, pp. 1735-1743
-
-
Srivastava, A.K.1
McDonald, L.R.2
Cembran, A.3
Kim, J.4
Masterson, L.R.5
McClendon, C.L.6
-
8
-
-
84936762406
-
Mapping the Hydrogen Bond Networks in the Catalytic Subunit of Protein Kinase A using H/D Fractionation Factors
-
Li G, Srivastava AK, Kim J, Taylor SS, Veglia G, Mapping the Hydrogen Bond Networks in the Catalytic Subunit of Protein Kinase A using H/D Fractionation Factors. Biochemistry. 2015;54: 4042–9. doi: 10.1021/acs.biochem.5b00387 26030372
-
(2015)
Biochemistry
, vol.54
, pp. 4042-4049
-
-
Li, G.1
Srivastava, A.K.2
Kim, J.3
Taylor, S.S.4
Veglia, G.5
-
9
-
-
77956929978
-
Control by Phosphorylation Part A—General Features, Specific Enzymes (I)
-
Beebe SJ, Corbin JD, Control by Phosphorylation Part A—General Features, Specific Enzymes (I). The Enzymes. 1986;17: 43–111.
-
(1986)
The Enzymes
, vol.17
, pp. 43-111
-
-
Beebe, S.J.1
Corbin, J.D.2
-
10
-
-
84908192391
-
Using Markov state models to develop a mechanistic understanding of protein kinase A regulatory subunit RIα activation in response to cAMP binding
-
Boras BW, Kornev A, Taylor SS, McCulloch AD, Using Markov state models to develop a mechanistic understanding of protein kinase A regulatory subunit RIα activation in response to cAMP binding. J Biol Chem. 2014;289: 30040–51. doi: 10.1074/jbc.M114.568907 25202018
-
(2014)
J Biol Chem
, vol.289
, pp. 30040-30051
-
-
Boras, B.W.1
Kornev, A.2
Taylor, S.S.3
McCulloch, A.D.4
-
11
-
-
0035413608
-
Dynamics of cAMP-dependent protein kinase
-
Johnson DA, Akamine P, Radzio-Andzelm E, Madhusudan M, Taylor SS, Dynamics of cAMP-dependent protein kinase. Chem Rev. 2001;101: 2243–2270. 11749372
-
(2001)
Chem Rev
, vol.101
, pp. 2243-2270
-
-
Johnson, D.A.1
Akamine, P.2
Radzio-Andzelm, E.3
Madhusudan, M.4
Taylor, S.S.5
-
12
-
-
29144449431
-
Dynamics of signaling by PKA
-
Taylor SS, Kim C, Vigil D, Haste NM, Yang J, Wu J, et al. Dynamics of signaling by PKA. Biochim Biophys Acta—Proteins Proteomics. 2005;1754: 25–37.
-
(2005)
Biochim Biophys Acta—Proteins Proteomics
, vol.1754
, pp. 25-37
-
-
Taylor, S.S.1
Kim, C.2
Vigil, D.3
Haste, N.M.4
Yang, J.5
Wu, J.6
-
13
-
-
34548611290
-
PKA-I Holoenzyme Structure Reveals a Mechanism for cAMP-Dependent Activation
-
Kim C, Cheng CY, Saldanha SA, Taylor SS, PKA-I Holoenzyme Structure Reveals a Mechanism for cAMP-Dependent Activation. Cell. 2007;130: 1032–1043. 17889648
-
(2007)
Cell
, vol.130
, pp. 1032-1043
-
-
Kim, C.1
Cheng, C.Y.2
Saldanha, S.A.3
Taylor, S.S.4
-
14
-
-
0029143803
-
Regulatory subunit of protein kinase A: structure of deletion mutant with cAMP binding domains
-
Su Y, Dostmann WR, Herberg FW, Durick K, Xuong NH, Ten Eyck L, et al. Regulatory subunit of protein kinase A: structure of deletion mutant with cAMP binding domains. Science. 1995;269: 807–813. 7638597
-
(1995)
Science
, vol.269
, pp. 807-813
-
-
Su, Y.1
Dostmann, W.R.2
Herberg, F.W.3
Durick, K.4
Xuong, N.H.5
Ten Eyck, L.6
-
15
-
-
2542523982
-
Crystal structures of RIalpha subunit of cyclic adenosine 5’-monophosphate (cAMP)-dependent protein kinase complexed with (Rp)-adenosine 3',5'-cyclic monophosphothioate and (Sp)-adenosine 3',5'-cyclic monophosphothioate, the phosphothioate analogues of cA
-
Wu J, Jones JM, Nguyen-Huu X, Ten Eyck LF, Taylor SS, Crystal structures of RIalpha subunit of cyclic adenosine 5’-monophosphate (cAMP)-dependent protein kinase complexed with (Rp)-adenosine 3',5'-cyclic monophosphothioate and (Sp)-adenosine 3',5'-cyclic monophosphothioate, the phosphothioate analogues of cA. Biochemistry. 2004;43: 6620–6629. 15157095
-
(2004)
Biochemistry
, vol.43
, pp. 6620-6629
-
-
Wu, J.1
Jones, J.M.2
Nguyen-Huu, X.3
Ten Eyck, L.F.4
Taylor, S.S.5
-
16
-
-
84883397614
-
Signaling through dynamic linkers as revealed by PKA
-
Akimoto M, Selvaratnam R, McNicholl ET, Verma G, Taylor SS, Melacini G, Signaling through dynamic linkers as revealed by PKA. Proc Natl Acad Sci U S A. 2013;110: 14231–6. doi: 10.1073/pnas.1312644110 23946424
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 14231-14236
-
-
Akimoto, M.1
Selvaratnam, R.2
McNicholl, E.T.3
Verma, G.4
Taylor, S.S.5
Melacini, G.6
-
17
-
-
84944715410
-
Bridging scales through multiscale modeling: a case study on protein kinase A
-
Boras BW, Hirakis SP, Votapka LW, Malmstrom RD, Amaro RE, McCulloch AD, Bridging scales through multiscale modeling: a case study on protein kinase A. Front Physiol. 2015 Sep 9;6:250. doi: 10.3389/fphys.2015.00250 26441670
-
(2015)
Front Physiol
, vol.6
, pp. 250
-
-
Boras, B.W.1
Hirakis, S.P.2
Votapka, L.W.3
Malmstrom, R.D.4
Amaro, R.E.5
McCulloch, A.D.6
-
18
-
-
0029932259
-
Active site mutations define the pathway for the cooperative activation of cAMP-dependent protein kinase
-
Herberg FW, Taylor SS, Dostmann WRG, Active site mutations define the pathway for the cooperative activation of cAMP-dependent protein kinase. Biochemistry. 1996;35: 2934–2942. 8608131
-
(1996)
Biochemistry
, vol.35
, pp. 2934-2942
-
-
Herberg, F.W.1
Taylor, S.S.2
Dostmann, W.R.G.3
-
19
-
-
11844254469
-
The cAMP binding domain: an ancient signaling module
-
Berman HM, Ten Eyck LF, Goodsell DS, Haste NM, Kornev A, Taylor SS, The cAMP binding domain: an ancient signaling module. Proc Natl Acad Sci U S A. 2005;102: 45–50. 15618393
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 45-50
-
-
Berman, H.M.1
Ten Eyck, L.F.2
Goodsell, D.S.3
Haste, N.M.4
Kornev, A.5
Taylor, S.S.6
-
20
-
-
2942527724
-
Rl alpha subunit of PKA: A cAMP-free structure reveals a hydrophobic capping mechanism for docking cAMP into site B RID A-3261-2009
-
Wu J, Brown S, Xuong NH, Taylor SS, Rl alpha subunit of PKA: A cAMP-free structure reveals a hydrophobic capping mechanism for docking cAMP into site B RID A-3261-2009. Structure. 2004;12: 1057–1065. 15274925
-
(2004)
Structure
, vol.12
, pp. 1057-1065
-
-
Wu, J.1
Brown, S.2
Xuong, N.H.3
Taylor, S.S.4
-
21
-
-
72149087959
-
Sensing domain dynamics in protein kinase A-I{alpha} complexes by solution X-ray scattering
-
Cheng CY, Yang J, Taylor SS, Blumenthal DK, Sensing domain dynamics in protein kinase A-I{alpha} complexes by solution X-ray scattering. J Biol Chem. 2009;284: 35916–35925. doi: 10.1074/jbc.M109.059493 19837668
-
(2009)
J Biol Chem
, vol.284
, pp. 35916-35925
-
-
Cheng, C.Y.1
Yang, J.2
Taylor, S.S.3
Blumenthal, D.K.4
-
22
-
-
27444444785
-
The conformationally dynamic C helix of the RIalpha subunit of protein kinase A mediates isoform-specific domain reorganization upon C subunit binding
-
Vigil D, Blumenthal DK, Taylor SS, Trewhella J, The conformationally dynamic C helix of the RIalpha subunit of protein kinase A mediates isoform-specific domain reorganization upon C subunit binding. J Biol Chem. 2005;280: 35521–35527. 16109722
-
(2005)
J Biol Chem
, vol.280
, pp. 35521-35527
-
-
Vigil, D.1
Blumenthal, D.K.2
Taylor, S.S.3
Trewhella, J.4
-
23
-
-
33644788934
-
Dynamic binding of PKA regulatory subunit RI alpha
-
Gullingsrud J, Kim C, Taylor SS, McCammon JA, Dynamic binding of PKA regulatory subunit RI alpha. Structure. 2006;14: 141–149. 16407073
-
(2006)
Structure
, vol.14
, pp. 141-149
-
-
Gullingsrud, J.1
Kim, C.2
Taylor, S.S.3
McCammon, J.A.4
-
24
-
-
84916887461
-
Allostery without a conformational change? Revisiting the paradigm
-
Nussinov R, Tsai C-J, Allostery without a conformational change? Revisiting the paradigm. Curr Opin Struct Biol. 2015;30: 17–24. doi: 10.1016/j.sbi.2014.11.005 25500675
-
(2015)
Curr Opin Struct Biol
, vol.30
, pp. 17-24
-
-
Nussinov, R.1
Tsai, C.-J.2
-
25
-
-
84919933634
-
Principles of allosteric interactions in cell signaling
-
Nussinov R, Tsai C-J, Liu J, Principles of allosteric interactions in cell signaling. J Am Chem Soc. 2014;136: 17692–701. doi: 10.1021/ja510028c 25474128
-
(2014)
J Am Chem Soc
, vol.136
, pp. 17692-17701
-
-
Nussinov, R.1
Tsai, C.-J.2
Liu, J.3
-
26
-
-
84929353747
-
Effects of membrane mimetics on cytochrome P450-cytochrome b5 interactions characterized by NMR spectroscopy
-
Zhang M, Huang R, Im S-C, Waskell L, Ramamoorthy A, Effects of membrane mimetics on cytochrome P450-cytochrome b5 interactions characterized by NMR spectroscopy. J Biol Chem. 2015;290: 12705–18. doi: 10.1074/jbc.M114.597096 25795780
-
(2015)
J Biol Chem
, vol.290
, pp. 12705-12718
-
-
Zhang, M.1
Huang, R.2
Im, S.-C.3
Waskell, L.4
Ramamoorthy, A.5
-
27
-
-
84929096323
-
Kinetic and structural characterization of the interaction between the FMN binding domain of cytochrome P450 reductase and cytochrome c
-
Huang R, Zhang M, Rwere F, Waskell L, Ramamoorthy A, Kinetic and structural characterization of the interaction between the FMN binding domain of cytochrome P450 reductase and cytochrome c. J Biol Chem. 2015;290: 4843–55. doi: 10.1074/jbc.M114.582700 25512382
-
(2015)
J Biol Chem
, vol.290
, pp. 4843-4855
-
-
Huang, R.1
Zhang, M.2
Rwere, F.3
Waskell, L.4
Ramamoorthy, A.5
-
28
-
-
84923346691
-
Insights into the role of substrates on the interaction between cytochrome b5 and cytochrome P450 2B4 by NMR
-
Zhang M, Le Clair S V, Huang R, Ahuja S, Im S-C, Waskell L, et al. Insights into the role of substrates on the interaction between cytochrome b5 and cytochrome P450 2B4 by NMR. Sci Rep. 2015;5: 8392. doi: 10.1038/srep08392 25687717
-
(2015)
Sci Rep
, vol.5
, pp. 8392
-
-
Zhang, M.1
Le Clair, S.V.2
Huang, R.3
Ahuja, S.4
Im, S.-C.5
Waskell, L.6
-
29
-
-
84930221645
-
Oncogenic and RASopathy-associated K-RAS mutations relieve membrane-dependent occlusion of the effector-binding site
-
Mazhab-Jafari MT, Marshall CB, Smith MJ, Gasmi-Seabrook GMC, Stathopulos PB, Inagaki F, et al. Oncogenic and RASopathy-associated K-RAS mutations relieve membrane-dependent occlusion of the effector-binding site. Proc Natl Acad Sci U S A. 2015;112: 6625–30. doi: 10.1073/pnas.1419895112 25941399
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 6625-6630
-
-
Mazhab-Jafari, M.T.1
Marshall, C.B.2
Smith, M.J.3
Gasmi-Seabrook, G.M.C.4
Stathopulos, P.B.5
Inagaki, F.6
-
30
-
-
84894039820
-
Integrated RAS signaling defined by parallel NMR detection of effectors and regulators
-
Smith MJ, Ikura M, Integrated RAS signaling defined by parallel NMR detection of effectors and regulators. Nat Chem Biol. 2014;10: 223–30. doi: 10.1038/nchembio.1435 24441586
-
(2014)
Nat Chem Biol
, vol.10
, pp. 223-230
-
-
Smith, M.J.1
Ikura, M.2
-
31
-
-
84952628203
-
Structural insights into endoplasmic reticulum stored calcium regulation by inositol 1,4,5-trisphosphate and ryanodine receptors
-
Seo M-D, Enomoto M, Ishiyama N, Stathopulos PB, Ikura M, Structural insights into endoplasmic reticulum stored calcium regulation by inositol 1,4,5-trisphosphate and ryanodine receptors. Biochim Biophys Acta. doi: 10.1016/j.bbamcr.2014.11.023
-
Biochim Biophys Acta
-
-
Seo, M.-D.1
Enomoto, M.2
Ishiyama, N.3
Stathopulos, P.B.4
Ikura, M.5
-
32
-
-
77952068200
-
Communication between tandem cAMP binding domains in the regulatory subunit of protein kinase A-Ialpha as revealed by domain-silencing mutations
-
McNicholl ET, Das R, SilDas S, Taylor SS, Melacini G, Communication between tandem cAMP binding domains in the regulatory subunit of protein kinase A-Ialpha as revealed by domain-silencing mutations. J Biol Chem. 2010;285: 15523–15537. doi: 10.1074/jbc.M110.105783 20202931
-
(2010)
J Biol Chem
, vol.285
, pp. 15523-15537
-
-
McNicholl, E.T.1
Das, R.2
SilDas, S.3
Taylor, S.S.4
Melacini, G.5
-
33
-
-
77951591233
-
Allosteric communication between cAMP binding sites in the RI subunit of protein kinase A revealed by NMR
-
Byeon IJ, Dao KK, Jung J, Keen J, Leiros I, Doskeland SO, et al. Allosteric communication between cAMP binding sites in the RI subunit of protein kinase A revealed by NMR. J Biol Chem. 2010;285: 14062–14070. doi: 10.1074/jbc.M110.106666 20197278
-
(2010)
J Biol Chem
, vol.285
, pp. 14062-14070
-
-
Byeon, I.J.1
Dao, K.K.2
Jung, J.3
Keen, J.4
Leiros, I.5
Doskeland, S.O.6
-
34
-
-
84902138801
-
Isomerase-catalyzed binding of interleukin-1 receptor-associated kinase 1 to the EVH1 domain of vasodilator-stimulated phosphoprotein
-
Greenwood AI, Kwon J, Nicholson LK, Isomerase-catalyzed binding of interleukin-1 receptor-associated kinase 1 to the EVH1 domain of vasodilator-stimulated phosphoprotein. Biochemistry. 2014;53: 3593–607. doi: 10.1021/bi500031e 24857403
-
(2014)
Biochemistry
, vol.53
, pp. 3593-3607
-
-
Greenwood, A.I.1
Kwon, J.2
Nicholson, L.K.3
-
35
-
-
78650447046
-
Structural biology: The twist in Crk signaling revealed
-
Nicholson LK, De S, Structural biology: The twist in Crk signaling revealed. Nat Chem Biol. 2011;7: 5–6. doi: 10.1038/nchembio.504 21164511
-
(2011)
Nat Chem Biol
, vol.7
, pp. 5-6
-
-
Nicholson, L.K.1
De, S.2
-
36
-
-
33846066294
-
cAMP activation of PKA defines an ancient signaling mechanism
-
Das R, Esposito V, Abu-Abed M, Anand GS, Taylor SS, Melacini G, cAMP activation of PKA defines an ancient signaling mechanism. Proc Natl Acad Sci U S A. 2007;104: 93–98. 17182741
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 93-98
-
-
Das, R.1
Esposito, V.2
Abu-Abed, M.3
Anand, G.S.4
Taylor, S.S.5
Melacini, G.6
-
37
-
-
84856748688
-
The Projection Analysis of NMR Chemical Shifts Reveals Extended EPAC Autoinhibition Determinants
-
Selvaratnam R, Vanschouwen B, Fogolari F, Mazhab-Jafari MT, Das R, Melacini G, The Projection Analysis of NMR Chemical Shifts Reveals Extended EPAC Autoinhibition Determinants. Biophys J. 2012;102: 630–639. doi: 10.1016/j.bpj.2011.12.030 22325287
-
(2012)
Biophys J
, vol.102
, pp. 630-639
-
-
Selvaratnam, R.1
Vanschouwen, B.2
Fogolari, F.3
Mazhab-Jafari, M.T.4
Das, R.5
Melacini, G.6
-
38
-
-
50349092827
-
Entropy-driven cAMP-dependent allosteric control of inhibitory interactions in exchange proteins directly activated by cAMP
-
Das R, Mazhab-Jafari MT, Chowdhury S, SilDas S, Selvaratnam R, Melacini G, Entropy-driven cAMP-dependent allosteric control of inhibitory interactions in exchange proteins directly activated by cAMP. J Biol Chem. 2008;283: 19691–703. doi: 10.1074/jbc.M802164200 18411261
-
(2008)
J Biol Chem
, vol.283
, pp. 19691-19703
-
-
Das, R.1
Mazhab-Jafari, M.T.2
Chowdhury, S.3
SilDas, S.4
Selvaratnam, R.5
Melacini, G.6
-
39
-
-
84905836722
-
A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP
-
Akimoto M, Zhang Z, Boulton S, Selvaratnam R, VanSchouwen B, Gloyd M, et al. A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP. J Biol Chem. 2014;289: 22205–22220. doi: 10.1074/jbc.M114.572164 24878962
-
(2014)
J Biol Chem
, vol.289
, pp. 22205-22220
-
-
Akimoto, M.1
Zhang, Z.2
Boulton, S.3
Selvaratnam, R.4
VanSchouwen, B.5
Gloyd, M.6
-
40
-
-
0242331659
-
The energetic cost of domain reorientation in maltose-binding protein as studied by NMR and fluorescence spectroscopy
-
Millet O, Hudson RP, Kay LE, The energetic cost of domain reorientation in maltose-binding protein as studied by NMR and fluorescence spectroscopy. Proc Natl Acad Sci U S A. 2003;100: 12700–5. 14530390
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 12700-12705
-
-
Millet, O.1
Hudson, R.P.2
Kay, L.E.3
-
41
-
-
0037192127
-
Characterization of the ATP-binding domain of the sarco(endo)plasmic reticulum Ca(2+)-ATPase: probing nucleotide binding by multidimensional NMR
-
Abu-Abed M, Mal TK, Kainosho M, MacLennan DH, Ikura M, Characterization of the ATP-binding domain of the sarco(endo)plasmic reticulum Ca(2+)-ATPase: probing nucleotide binding by multidimensional NMR. Biochemistry. 2002;41: 1156–64. 11802714
-
(2002)
Biochemistry
, vol.41
, pp. 1156-1164
-
-
Abu-Abed, M.1
Mal, T.K.2
Kainosho, M.3
MacLennan, D.H.4
Ikura, M.5
-
42
-
-
84870604188
-
pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR
-
Lorieau JL, Louis JM, Schwieters CD, Bax A, pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR. Proc Natl Acad Sci U S A. 2012;109: 19994–9. doi: 10.1073/pnas.1213801109 23169643
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 19994-19999
-
-
Lorieau, J.L.1
Louis, J.M.2
Schwieters, C.D.3
Bax, A.4
-
43
-
-
77952725646
-
Dissecting the cAMP-inducible allosteric switch in protein kinase A RIalpha
-
Sjoberg TJ, Kornev AP, Taylor SS, Dissecting the cAMP-inducible allosteric switch in protein kinase A RIalpha. Protein Sci. 2010;19: 1213–1221. doi: 10.1002/pro.400 20512974
-
(2010)
Protein Sci
, vol.19
, pp. 1213-1221
-
-
Sjoberg, T.J.1
Kornev, A.P.2
Taylor, S.S.3
-
44
-
-
84936103060
-
Allostery through the computational microscope: cAMP activation of a canonical signalling domain
-
Malmstrom RD, Kornev AP, Taylor SS, Amaro RE, Allostery through the computational microscope: cAMP activation of a canonical signalling domain. Nat Commun.; 2015;6: 7588.
-
(2015)
Nat Commun
, vol.6
, pp. 7588
-
-
Malmstrom, R.D.1
Kornev, A.P.2
Taylor, S.S.3
Amaro, R.E.4
-
45
-
-
0034642224
-
Consequences of cAMP-binding site mutations on the structural stability of the type I regulatory subunit of cAMP-dependent protein kinase
-
Canaves JM, Leon DA, Taylor SS, Consequences of cAMP-binding site mutations on the structural stability of the type I regulatory subunit of cAMP-dependent protein kinase. Biochemistry. 2000;39: 15022–15031. 11106480
-
(2000)
Biochemistry
, vol.39
, pp. 15022-15031
-
-
Canaves, J.M.1
Leon, D.A.2
Taylor, S.S.3
-
46
-
-
0025851505
-
Unfolding of the regulatory subunit of cAMP-dependent protein kinase I
-
León D a Dostmann WR, Taylor SS, Unfolding of the regulatory subunit of cAMP-dependent protein kinase I. Biochemistry. 1991;30: 3035–3040. 1848784
-
(1991)
Biochemistry
, vol.30
, pp. 3035-3040
-
-
León D a, D.W.R.1
Taylor, S.S.2
-
47
-
-
0034673984
-
Probing the multidomain structure of the type I regulatory subunit of cAMP-dependent protein kinase using mutational analysis: role and environment of endogenous tryptophans
-
Leon DA, Canaves JM, Taylor SS, Probing the multidomain structure of the type I regulatory subunit of cAMP-dependent protein kinase using mutational analysis: role and environment of endogenous tryptophans. Biochemistry 2000;39: 5662–5671.
-
(2000)
Biochemistry
, vol.39
, pp. 5662-5671
-
-
Leon, D.A.1
Canaves, J.M.2
Taylor, S.S.3
-
48
-
-
84896970480
-
Tapping the translation potential of cAMP signalling: molecular basis for selectivity in cAMP agonism and antagonism as revealed by NMR
-
Boulton S, Akimoto M, Vanschouwen B, Moleschi K, Selvaratnam R, Giri R, et al. Tapping the translation potential of cAMP signalling: molecular basis for selectivity in cAMP agonism and antagonism as revealed by NMR. Biochem. Soc. Trans. 2014;42: 302–307.
-
(2014)
Biochem. Soc. Trans
, vol.42
, pp. 302-307
-
-
Boulton, S.1
Akimoto, M.2
Vanschouwen, B.3
Moleschi, K.4
Selvaratnam, R.5
Giri, R.6
-
49
-
-
84893289817
-
Allosteric linkers in cAMP signalling
-
Akimoto M, Moleschi K, Boulton S, VanSchouwen B, Selvaratnam R, Taylor SS, et al. Allosteric linkers in cAMP signalling. Biochem. Soc. Trans. 2014;42: 139–144. doi: 10.1042/BST20130257 24450641
-
(2014)
Biochem. Soc. Trans
, vol.42
, pp. 139-144
-
-
Akimoto, M.1
Moleschi, K.2
Boulton, S.3
VanSchouwen, B.4
Selvaratnam, R.5
Taylor, S.S.6
-
50
-
-
84937509615
-
Role of Dynamics in the Auto-Inhibition and Activation of the Hyperpolarization-Activated Cyclic-Nucleotide-Modulated (HCN) Ion Channels
-
VanSchouwen B, Akimoto M, Sayadi M, Fogolari F, Melacini G, Role of Dynamics in the Auto-Inhibition and Activation of the Hyperpolarization-Activated Cyclic-Nucleotide-Modulated (HCN) Ion Channels. J Biol Chem. 2015 Jul 17;290(29):17642–54 doi: 10.1074/jbc.M115.651877 25944904
-
(2015)
J Biol Chem
, vol.290
, Issue.29
, pp. 17642-17654
-
-
VanSchouwen, B.1
Akimoto, M.2
Sayadi, M.3
Fogolari, F.4
Melacini, G.5
-
51
-
-
84909607968
-
Signaling at crossroads: the dialogue between PDEs and PKA is spoken in multiple languages
-
Moleschi K, Melacini G, Signaling at crossroads: the dialogue between PDEs and PKA is spoken in multiple languages. Biophys J. 2014;107: 1259–60. doi: 10.1016/j.bpj.2014.07.051 25229132
-
(2014)
Biophys J
, vol.107
, pp. 1259-1260
-
-
Moleschi, K.1
Melacini, G.2
-
52
-
-
84909580096
-
Active site coupling in PDE:PKA complexes promotes resetting of mammalian cAMP signaling
-
Krishnamurthy S, Moorthy BS, Xin Xiang L, Xin Shan L, Bharatham K, Tulsian NK, et al. Active site coupling in PDE:PKA complexes promotes resetting of mammalian cAMP signaling. Biophys J. 2014;107: 1426–40. doi: 10.1016/j.bpj.2014.07.050 25229150
-
(2014)
Biophys J
, vol.107
, pp. 1426-1440
-
-
Krishnamurthy, S.1
Moorthy, B.S.2
Xin Xiang, L.3
Xin Shan, L.4
Bharatham, K.5
Tulsian, N.K.6
-
53
-
-
84941810399
-
Parallel Allostery by cAMP and PDE Coordinates Activation and Termination Phases in cAMP Signaling
-
Krishnamurthy S, Tulsian NK, Chandramohan A, Anand GS, Parallel Allostery by cAMP and PDE Coordinates Activation and Termination Phases in cAMP Signaling. Biophys J. 2015 Sep 15;109(6):1251–63. doi: 10.1016/j.bpj.2015.06.067 26276689
-
(2015)
Biophys J
, vol.109
, Issue.6
, pp. 1251-1263
-
-
Krishnamurthy, S.1
Tulsian, N.K.2
Chandramohan, A.3
Anand, G.S.4
-
54
-
-
0034254510
-
8-Substituted cAMP analogues reveal marked differences in adaptability, hydrogen bonding, and charge accommodation between homologous binding sites (AI/AII and BI/BII) in cAMP kinase I and II
-
Schwede F, Christensen A, Liauw S, Hippe T, Kopperud R, Jastorff B, et al. 8-Substituted cAMP analogues reveal marked differences in adaptability, hydrogen bonding, and charge accommodation between homologous binding sites (AI/AII and BI/BII) in cAMP kinase I and II. Biochemistry. 2000;39: 8803–8812. 10913291
-
(2000)
Biochemistry
, vol.39
, pp. 8803-8812
-
-
Schwede, F.1
Christensen, A.2
Liauw, S.3
Hippe, T.4
Kopperud, R.5
Jastorff, B.6
-
55
-
-
0035170874
-
Solution structure of ThiS and implications for the evolutionary roots of ubiquitin
-
Wang C, Xi J, Begley TP, Nicholson LK, Solution structure of ThiS and implications for the evolutionary roots of ubiquitin. Nat Struct Biol. 2001;8: 47–51. 11135670
-
(2001)
Nat Struct Biol
, vol.8
, pp. 47-51
-
-
Wang, C.1
Xi, J.2
Begley, T.P.3
Nicholson, L.K.4
-
57
-
-
79958182720
-
Recurrent PRKAR1A mutation in acrodysostosis with hormone resistance
-
Linglart A, Menguy C, Couvineau A, Auzan C, Gunes Y, Cancel M, et al. Recurrent PRKAR1A mutation in acrodysostosis with hormone resistance. N Engl J Med. 2011;364: 2218–26. doi: 10.1056/NEJMoa1012717 21651393
-
(2011)
N Engl J Med
, vol.364
, pp. 2218-2226
-
-
Linglart, A.1
Menguy, C.2
Couvineau, A.3
Auzan, C.4
Gunes, Y.5
Cancel, M.6
-
58
-
-
84866170771
-
PRKAR1A mutation affecting cAMP-mediated G protein-coupled receptor signaling in a patient with acrodysostosis and hormone resistance
-
Nagasaki K, Iida T, Sato H, Ogawa Y, Kikuchi T, Saitoh A, et al. PRKAR1A mutation affecting cAMP-mediated G protein-coupled receptor signaling in a patient with acrodysostosis and hormone resistance. J Clin Endocrinol Metab. 2012;97: E1808–13. doi: 10.1210/jc.2012-1369 22723333
-
(2012)
J Clin Endocrinol Metab
, vol.97
, pp. 13-1808
-
-
Nagasaki, K.1
Iida, T.2
Sato, H.3
Ogawa, Y.4
Kikuchi, T.5
Saitoh, A.6
-
59
-
-
84937541703
-
Protein kinase A alterations in adrenocortical tumors
-
Espiard S, Ragazzon B, Bertherat J, Protein kinase A alterations in adrenocortical tumors. Horm Metab Res. 2014;46: 869–75. doi: 10.1055/s-0034-1385908 25105543
-
(2014)
Horm Metab Res
, vol.46
, pp. 869-875
-
-
Espiard, S.1
Ragazzon, B.2
Bertherat, J.3
-
60
-
-
84941703228
-
Measurement of State-Specific Association Constants in Allosteric Sensors through Molecular Stapling and NMR
-
Moleschi KJ, Akimoto M, Melacini G, Measurement of State-Specific Association Constants in Allosteric Sensors through Molecular Stapling and NMR. J Am Chem Soc. 2015; 137 (33): 10777–10785. doi: 10.1021/jacs.5b06557
-
(2015)
J Am Chem Soc
, vol.137
, Issue.33
, pp. 10777-10785
-
-
Moleschi, K.J.1
Akimoto, M.2
Melacini, G.3
-
61
-
-
0029400480
-
Nmrpipe—a Multidimensional Spectral Processing System Based on Unix Pipes
-
Delaglio F, Grzesiek S, Vuister GW, Zhu G, Pfeifer J, Bax A, Nmrpipe—a Multidimensional Spectral Processing System Based on Unix Pipes. J Biomol NMR. 1995;6: 277–293. 8520220
-
(1995)
J Biomol NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
62
-
-
84949461307
-
-
T. D. Goddard and D. G. Kneller University of California SF. SPARKY. https://www.cgl.ucsf.edu/home/sparky/
-
-
-
-
63
-
-
0347722841
-
Heteronuclear multidimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients
-
Sattler M, Schleucher J, Griesinger C, Heteronuclear multidimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients. Prog Nucl Magn Reson Spectrosc. 1999;34: 93–158.
-
(1999)
Prog Nucl Magn Reson Spectrosc
, vol.34
, pp. 93-158
-
-
Sattler, M.1
Schleucher, J.2
Griesinger, C.3
-
64
-
-
0032506009
-
TROSY in triple-resonance experiments: new perspectives for sequential NMR assignment of large proteins
-
Salzmann M, Pervushin K, Wider G, Senn H, Wuthrich K, TROSY in triple-resonance experiments: new perspectives for sequential NMR assignment of large proteins. Proc Natl Acad Sci U S A. 1998;95: 13585–13590. 9811843
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 13585-13590
-
-
Salzmann, M.1
Pervushin, K.2
Wider, G.3
Senn, H.4
Wuthrich, K.5
-
65
-
-
24344440618
-
Probabilistic identification of spin systems and their assignments including coil-helix inference as output (PISTACHIO)
-
Eghbalnia HR, Bahrami A, Wang LY, Assadi A, Markley JL, Probabilistic identification of spin systems and their assignments including coil-helix inference as output (PISTACHIO). J Biomol NMR. 2005;32: 219–233. 16132822
-
(2005)
J Biomol NMR
, vol.32
, pp. 219-233
-
-
Eghbalnia, H.R.1
Bahrami, A.2
Wang, L.Y.3
Assadi, A.4
Markley, J.L.5
-
66
-
-
33846954752
-
A model for agonism and antagonism in an ancient and ubiquitous cAMP-binding domain
-
Das R, Melacini G, A model for agonism and antagonism in an ancient and ubiquitous cAMP-binding domain. J Biol Chem. 2007;282: 581–593. 17074757
-
(2007)
J Biol Chem
, vol.282
, pp. 581-593
-
-
Das, R.1
Melacini, G.2
-
67
-
-
0035996729
-
Interpretation of 15N NMR relaxation data of globular proteins using hydrodynamic calculations with HYDRONMR
-
Bernadó P, De la Torre JG, Pons M, Interpretation of 15N NMR relaxation data of globular proteins using hydrodynamic calculations with HYDRONMR. J Biomol NMR. 2002;23: 139–150. 12153039
-
(2002)
J Biomol NMR
, vol.23
, pp. 139-150
-
-
Bernadó, P.1
De la Torre, J.G.2
Pons, M.3
-
68
-
-
0035951175
-
Building hydrodynamic bead-shell models for rigid bioparticles of arbitrary shape
-
Garcia de la Torre J, Building hydrodynamic bead-shell models for rigid bioparticles of arbitrary shape. Biophys Chem. 2001;94: 265–274. 11804736
-
(2001)
Biophys Chem
, vol.94
, pp. 265-274
-
-
Garcia de la Torre, J.1
|