-
2
-
-
84861940981
-
Pharmacogenomics and personalized medicine in neuropsychiatry
-
McMahon FJ, Insel TR. Pharmacogenomics and personalized medicine in neuropsychiatry. Neuron 74.5 (2012), 773-776.
-
(2012)
Neuron
, vol.74
, Issue.5
, pp. 773-776
-
-
McMahon, F.J.1
Insel, T.R.2
-
3
-
-
84927719342
-
Genetic variants in combination with early partial improvement as a clinical utility predictor of treatment outcome in major depressive disorder: The result of two pooled RCTs
-
Kato M, Serretti A, Nonen S, et al. Genetic variants in combination with early partial improvement as a clinical utility predictor of treatment outcome in major depressive disorder: the result of two pooled RCTs. Transl. Psychiatry 5.2 (2015), e513.
-
(2015)
Transl. Psychiatry
, vol.5
, Issue.2
, pp. e513
-
-
Kato, M.1
Serretti, A.2
Nonen, S.3
-
4
-
-
85016925201
-
Cost-effectiveness of combinatorial pharmacogenomic testing for treatment-resistant major depressive disorder patients
-
Hornberger J, Li Q, Quinn B. Cost-effectiveness of combinatorial pharmacogenomic testing for treatment-resistant major depressive disorder patients. Am. J. Manag. Care 12(6), e357-e365 (2015).
-
(2015)
Am. J. Manag. Care
, vol.12
, Issue.6
, pp. e357-e365
-
-
Hornberger, J.1
Li, Q.2
Quinn, B.3
-
5
-
-
84889610517
-
A prospective, randomized, double-blind study assessing the clinical impact of integrated pharmacogenomic testing for major depressive disorder
-
Winner JG, Carhart JM, Altar CA, Allen JD, Dechairo BM. A prospective, randomized, double-blind study assessing the clinical impact of integrated pharmacogenomic testing for major depressive disorder. Discov. Med. 16(89), 219-227 (2013).
-
(2013)
Discov. Med.
, vol.16
, Issue.89
, pp. 219-227
-
-
Winner, J.G.1
Carhart, J.M.2
Altar, C.A.3
Allen, J.D.4
Dechairo, B.M.5
-
6
-
-
84885082776
-
Utility of integrated pharmacogenomic testing to support the treatment of major depressive disorder in a psychiatric outpatient setting
-
Hall-Flavin DK, Winner JG, Allen JD et al. Utility of integrated pharmacogenomic testing to support the treatment of major depressive disorder in a psychiatric outpatient setting. Pharmacogenet. Genomics 23(10), 535-554 (2013).
-
(2013)
Pharmacogenet. Genomics
, vol.23
, Issue.10
, pp. 535-554
-
-
Hall-Flavin, D.K.1
Winner, J.G.2
Allen, J.D.3
-
7
-
-
84945537664
-
-
U.S. Food and Drug Administration
-
U.S. Food and Drug Administration. www.fda.gov/drugs/scienceresearch/researchareas/
-
-
-
-
8
-
-
84890454893
-
Revitalizing psychiatric therapeutics
-
Hyman SE. Revitalizing psychiatric therapeutics. Neuropsychopharmacology 39, 220-229 (2014).
-
(2014)
Neuropsychopharmacology
, vol.39
, pp. 220-229
-
-
Hyman, S.E.1
-
9
-
-
84907016697
-
Emergency department visits by adults for psychiatric medication adverse events
-
Hampton LM, Daubresse M, Chang HY, Alexander GC, Budnitz DS. Emergency department visits by adults for psychiatric medication adverse events. JAMA Psychiatry 71, 1006-1014 (2014).
-
(2014)
JAMA Psychiatry
, vol.71
, pp. 1006-1014
-
-
Hampton, L.M.1
Daubresse, M.2
Chang, H.Y.3
Alexander, G.C.4
Budnitz, D.S.5
-
10
-
-
84875211310
-
Cytochrome P450 enzymes in drug metabolism: Regulation of gene expression, enzyme activities, and impact of genetic variation
-
Zanger UM, Schwab M. Cytochrome P450 enzymes in drug metabolism: regulation of gene expression, enzyme activities, and impact of genetic variation. Pharmacol. Ther. 138, 103-141 (2013).
-
(2013)
Pharmacol. Ther.
, vol.138
, pp. 103-141
-
-
Zanger, U.M.1
Schwab, M.2
-
11
-
-
84894437046
-
Genetics, epigenetics and regulation of drug metabolizing cytochrome P450 enzymes
-
Zanger UM, Klein K, Thomas M et al. Genetics, epigenetics and regulation of drug metabolizing cytochrome P450 enzymes. Clin. Pharmacol. Ther. 95, 258-261 (2014).
-
(2014)
Clin. Pharmacol. Ther.
, vol.95
, pp. 258-261
-
-
Zanger, U.M.1
Klein, K.2
Thomas, M.3
-
12
-
-
84945548094
-
-
NIH. 4D nucleome
-
NIH. 4D nucleome. https://commonfund.nih.gov/4Dnucleome/index
-
-
-
-
13
-
-
0035316574
-
Chromosome territories, nuclear architecture and gene regulation in mammalian cells
-
Cremer T, Cremer C. Chromosome territories, nuclear architecture and gene regulation in mammalian cells. Nature Rev. Genet. 2(4), 292-301(2001).
-
(2001)
Nature Rev. Genet.
, vol.2
, Issue.4
, pp. 292-301
-
-
Cremer, T.1
Cremer, C.2
-
15
-
-
84861095603
-
Topological domains in mammalian genomes identifed by analysis of chromatin interactions
-
Dixon JR, Selvaraj S, Yue F et al. Topological domains in mammalian genomes identifed by analysis of chromatin interactions. Nature 485, 376-380 (2012).
-
(2012)
Nature
, vol.485
, pp. 376-380
-
-
Dixon, J.R.1
Selvaraj, S.2
Yue, F.3
-
16
-
-
70349873824
-
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
-
Lieberman-Aiden E, van Berkum NL, Williams L et al. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science 326(5950), 289-293 (2009).
-
(2009)
Science
, vol.326
, Issue.5950
, pp. 289-293
-
-
Lieberman-Aiden, E.1
Van Berkum, N.L.2
Williams, L.3
-
17
-
-
84919949716
-
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping
-
Rao SSP, Huntley MH, Durand NC et al. A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell 159, 1665-1680 (2014).
-
(2014)
Cell
, vol.159
, pp. 1665-1680
-
-
Ssp, R.1
Huntley, M.H.2
Durand, N.C.3
-
18
-
-
84909592563
-
A circadian gene expression atlas in mammals: Implications for biology and medicine
-
Zhang R, Lahens NF, Ballance HI, Hughes ME, Hogenesch JB. A circadian gene expression atlas in mammals: implications for biology and medicine. Proc. Natl Acad. Sci. USA 111, 16219-16224 (2014).
-
(2014)
Proc. Natl Acad. Sci. USA
, vol.111
, pp. 16219-16224
-
-
Zhang, R.1
Lahens, N.F.2
Ballance, H.I.3
Hughes, M.E.4
Hogenesch, J.B.5
-
19
-
-
84937822827
-
Functional organization of the human 4D nucleome
-
Chen H, Chen J, Muir LA et al. Functional organization of the human 4D nucleome. Proc. Natl Acad. Sci. USA 112(26), 8002-8007 (2015).
-
(2015)
Proc. Natl Acad. Sci. USA
, vol.112
, Issue.26
, pp. 8002-8007
-
-
Chen, H.1
Chen, J.2
Muir, L.A.3
-
21
-
-
84892179132
-
Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells
-
Deng Q, Ramsköld D, Reinius B, Sandberg R. Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells. Science 343, 193-196 (2014).
-
(2014)
Science
, vol.343
, pp. 193-196
-
-
Deng, Q.1
Ramsköld, D.2
Reinius, B.3
Sandberg, R.4
-
22
-
-
58349092614
-
Allele-specifc gene expression is widespread across the genome and biological processes
-
Palacios R, Gazave E, Goñi J et al. Allele-specifc gene expression is widespread across the genome and biological processes. PLoS ONE 4, e4150 (2009).
-
(2009)
PLoS ONE
, vol.4
, pp. e4150
-
-
Palacios, R.1
Gazave, E.2
Goñi, J.3
-
23
-
-
84876555679
-
Allen Brain Atlas: An integrated spatio-temporal portal for exploring the central nervous system
-
Sunkin SM, Ng L, Lau C et al. Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system. Nucleic Acids Res. 41, D996-D1008 (2013).
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. D996-D1008
-
-
Sunkin, S.M.1
Ng, L.2
Lau, C.3
-
24
-
-
79952534189
-
Regulation of chromatin by histone modifcations
-
Bannister AJ, Kouzarides T. Regulation of chromatin by histone modifcations. Cell Res. 21, 381-395 (2011).
-
(2011)
Cell Res.
, vol.21
, pp. 381-395
-
-
Bannister, A.J.1
Kouzarides, T.2
-
25
-
-
84862732690
-
New insights into nucleosome and chromatin structure: An ordered state or a disordered affair?
-
Luger K, Dechassa ML, Tremethick DJ. New insights into nucleosome and chromatin structure: an ordered state or a disordered affair? Nat. Rev. Mol. Cell. Biol. 13, 436-447 (2012).
-
(2012)
Nat. Rev. Mol. Cell. Biol.
, vol.13
, pp. 436-447
-
-
Luger, K.1
Dechassa, M.L.2
Tremethick, D.J.3
-
27
-
-
84923326765
-
Genetic and epigenetic fne mapping of causal autoimmune disease variants
-
Epub ahead of print
-
Farh KK, Marson A, Zhu J et al. Genetic and epigenetic fne mapping of causal autoimmune disease variants. Nature 518, 337-343 doi:10.1038/nature13835 (2015) (Epub ahead of print).
-
(2015)
Nature
, vol.518
, pp. 337-343
-
-
Farh, K.K.1
Marson, A.2
Zhu, J.3
-
28
-
-
51649084617
-
Regulatory polymorphism in Vitamin K epoxide reductase complex subunit 1 (VKORC1) affects gene expression and warfarin dose requirement
-
Wang D, Chen H, Momary KM, Cavallar LH, Johnson JA, Sadée W. Regulatory polymorphism in vitamin K epoxide reductase complex subunit 1 (VKORC1) affects gene expression and warfarin dose requirement. Blood 112, 1013-1021 (2008).
-
(2008)
Blood
, vol.112
, pp. 1013-1021
-
-
Wang, D.1
Chen, H.2
Momary, K.M.3
Cavallar, L.H.4
Johnson, J.A.5
Sadée, W.6
-
29
-
-
84937201710
-
The effects of early life stress on the epigenome: From the womb to adulthood and even before
-
Provencal N, Binder EB. The effects of early life stress on the epigenome: from the womb to adulthood and even before. Exp. Neurol. 286, 10-20 (2014).
-
(2014)
Exp. Neurol.
, vol.286
, pp. 10-20
-
-
Provencal, N.1
Binder, E.B.2
-
31
-
-
84905911703
-
Ancestral exposure to stress epigenetically programs preterm birth risk and adverse maternal and newborn outcomes
-
Yao Y, Robinson AM, Zucchi FC et al. Ancestral exposure to stress epigenetically programs preterm birth risk and adverse maternal and newborn outcomes. BMC Med. 12, 121 (2014).
-
(2014)
BMC Med.
, vol.12
, pp. 121
-
-
Yao, Y.1
Robinson, A.M.2
Zucchi, F.C.3
-
32
-
-
84910134758
-
Missing heritability of common diseases and treatments outside the protein-coding exome
-
Sadee W, Hartmann K, Seweryn M, Pietrzak M, Handelman SK, Rempala GA. Missing heritability of common diseases and treatments outside the protein-coding exome. Human Genet. 133, 1199-1215 (2014).
-
(2014)
Human Genet.
, vol.133
, pp. 1199-1215
-
-
Sadee, W.1
Hartmann, K.2
Seweryn, M.3
Pietrzak, M.4
Handelman, S.K.5
Rempala, G.A.6
-
33
-
-
75649151064
-
Avoiding the high Bonferroni penalty in genome-wide association studies
-
Gao X, Becker LC, Becker DM, Starmer JD, Province MA. Avoiding the high Bonferroni penalty in genome-wide association studies. Genet. Epidemiol. 34, 100-105 (2010).
-
(2010)
Genet. Epidemiol.
, vol.34
, pp. 100-105
-
-
Gao, X.1
Becker, L.C.2
Becker, D.M.3
Starmer, J.D.4
Province, M.A.5
-
34
-
-
84899633396
-
Defning functional DNA elements in the human genome
-
Kellis M, Wold B, Snyder MP et al. Defning functional DNA elements in the human genome. Proc. Natl Acad. Sci. USA 111, 6131-6138 (2014).
-
(2014)
Proc. Natl Acad. Sci. USA
, vol.111
, pp. 6131-6138
-
-
Kellis, M.1
Wold, B.2
Snyder, M.P.3
-
35
-
-
0035895505
-
The sequence of the human genome
-
Venter JC, Adams MD, Myers EW et al. The sequence of the human genome. Science 291, 1304-1351 (2001).
-
(2001)
Science
, vol.291
, pp. 1304-1351
-
-
Venter, J.C.1
Adams, M.D.2
Myers, E.W.3
-
36
-
-
84864402194
-
Leveraging models of cell regulation and GWAS data in integrative network-based association studies
-
Califano A, Butte AJ, Friend S, Ideker T, Schadt E. Leveraging models of cell regulation and GWAS data in integrative network-based association studies. Nat. Genet. 44(8), 841-847 (2012).
-
(2012)
Nat. Genet.
, vol.44
, Issue.8
, pp. 841-847
-
-
Califano, A.1
Butte, A.J.2
Friend, S.3
Ideker, T.4
Schadt, E.5
-
37
-
-
84865777825
-
Linking disease associations with regulatory information in the human genome
-
Schaub MA, Boyle AP, Kundaje A, Batzoglou S, Snyder M. Linking disease associations with regulatory information in the human genome. Genome Res. 22, 1748-1759 (2012).
-
(2012)
Genome Res.
, vol.22
, pp. 1748-1759
-
-
Ma, S.1
Boyle, A.P.2
Kundaje, A.3
Batzoglou, S.4
Snyder, M.5
-
38
-
-
84865712382
-
Annotation of functional variation in personal genomes using RegulomeDB
-
Boyle AP, Hong EL, Hariharan M et al. Annotation of functional variation in personal genomes using RegulomeDB. Genome Res. 22, 1790-1797 (2012).
-
(2012)
Genome Res.
, vol.22
, pp. 1790-1797
-
-
Boyle, A.P.1
Hong, E.L.2
Hariharan, M.3
-
39
-
-
84926147304
-
Selecting causal genes from genome-wide association studies via functionally coherent subnetworks
-
M, Musso G, Hao T, Vidal M, MacRae CA, Roth FP. Selecting causal genes from genome-wide association studies via functionally coherent subnetworks. Nat. Methods 12(2), 154-159 (2015).
-
(2015)
Nat. Methods
, vol.12
, Issue.2
, pp. 154-159
-
-
Musso, G.1
Hao, T.2
Vidal, M.3
MacRae, C.A.4
Roth, F.P.5
-
40
-
-
84923077204
-
Psychiatric genome-wide association study analyses implicate neuronal, immune and histone pathways Nat
-
Network and Pathway Analysis Subgroup of the Psychiatric Genomics Consortium. Psychiatric genome-wide association study analyses implicate neuronal, immune and histone pathways Nat. Neurosci. 18, 199-209 (2015).
-
(2015)
Neurosci.
, vol.18
, pp. 199-209
-
-
-
41
-
-
84920624243
-
Joint GWAS analysis: Comparing similar GWAS at different genomic resolutions identifes novel pathway associations with six complex diseases
-
McGeachie MJ, Clemmer GL, Lasky-Su J, Dahlin A, Raby BA, Weiss ST. Joint GWAS analysis: comparing similar GWAS at different genomic resolutions identifes novel pathway associations with six complex diseases. Genomics Data 2, 202-211 (2014).
-
(2014)
Genomics Data
, vol.2
, pp. 202-211
-
-
McGeachie, M.J.1
Clemmer, G.L.2
Lasky-Su, J.3
Dahlin, A.4
Raby, B.A.5
Weiss, S.T.6
-
43
-
-
78650747491
-
Discovery and characterization of chromatin states for systematic annotation of the human genome
-
Ernst J, Kellis M. Discovery and characterization of chromatin states for systematic annotation of the human genome. Nat. Biotechnol. 28, 817-825 (2010).
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 817-825
-
-
Ernst, J.1
Kellis, M.2
-
44
-
-
84865790047
-
The ENCODE Project Consortium: An integrated encyclopedia of DNA elements in the human genome
-
The ENCODE Project Consortium: an integrated encyclopedia of DNA elements in the human genome. Nature 489, 57-74 (2012).
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
-
45
-
-
84887072795
-
Chromatin stretch enhancer states drive cell-specifc gene regulation and harbor human disease risk variants
-
Parker SC, Stitzel ML, Taylor DL et al. Chromatin stretch enhancer states drive cell-specifc gene regulation and harbor human disease risk variants. Proc. Natl Acad. Sci. USA 110, 17921-17926 (2013).
-
(2013)
Proc. Natl Acad. Sci. USA
, vol.110
, pp. 17921-17926
-
-
Parker, S.C.1
Stitzel, M.L.2
Taylor, D.L.3
-
46
-
-
84923333199
-
Integrative analysis of haplotype-resolved epigenomes across human tissues
-
Leung D, Jung I, Rajagopal N et al. Integrative analysis of haplotype-resolved epigenomes across human tissues. Nature 518, 350-354 (2015).
-
(2015)
Nature
, vol.518
, pp. 350-354
-
-
Leung, D.1
Jung, I.2
Rajagopal, N.3
-
47
-
-
84945574605
-
Epigenomic mapping and effect sizes of noncoding variants associated with psychotropic drug response
-
In press
-
Higgins GA, Allyn-Feuer A, Athey BD. Epigenomic mapping and effect sizes of noncoding variants associated with psychotropic drug response. Pharmacogenomics J. (2015) (In press).
-
(2015)
Pharmacogenomics J.
-
-
Higgins, G.A.1
Allyn-Feuer, A.2
Athey, B.D.3
-
48
-
-
84945578611
-
A glutamatergic network mediates lithium response in bipolar disorder as defned by epigenome pathway analysis
-
In press
-
Higgins GA, Allyn-Feuer A, Barbour E, Athey BD. A glutamatergic network mediates lithium response in bipolar disorder as defned by epigenome pathway analysis. Pharmacogenomics J. (2015) (In press).
-
(2015)
Pharmacogenomics J.
-
-
Higgins, G.A.1
Allyn-Feuer, A.2
Barbour, E.3
Athey, B.D.4
-
49
-
-
84858999530
-
Genome-wide association study of antipsychotic-induced QTc interval prolongation
-
Aberg K, Adkins DE, Liu Y et al. Genome-wide association study of antipsychotic-induced QTc interval prolongation. Pharmacogenomics J. 12, 165-172 (2012).
-
(2012)
Pharmacogenomics J.
, vol.12
, pp. 165-172
-
-
Aberg, K.1
De, A.2
Liu, Y.3
-
50
-
-
0345688810
-
NQO2 gene is associated with clozapine-induced agranulocytosis
-
Ostrousky O, Meged S, Loewenthal R et al. NQO2 gene is associated with clozapine-induced agranulocytosis. Tissue Antigens 62, 483-491 (2003).
-
(2003)
Tissue Antigens
, vol.62
, pp. 483-491
-
-
Ostrousky, O.1
Meged, S.2
Loewenthal, R.3
-
51
-
-
84878287548
-
Nitric oxide synthase 1 adaptor protein, an emerging new genetic marker for QT prolongation and sudden cardiac death
-
Chang KC, Sasano T, Wang YC et al. Nitric oxide synthase 1 adaptor protein, an emerging new genetic marker for QT prolongation and sudden cardiac death. Acta Cardiol. Sin. 29, 217-225 (2013).
-
(2013)
Acta Cardiol. Sin.
, vol.29
, pp. 217-225
-
-
Chang, K.C.1
Sasano, T.2
Wang, Y.C.3
-
52
-
-
84865283619
-
Common variation in the NOS1AP gene is associated with drug-induced QT prolongation and ventricular arrhythmia
-
Jamshidi Y, Nolte IM, Dalageorgou C et al. Common variation in the NOS1AP gene is associated with drug-induced QT prolongation and ventricular arrhythmia. J. Am. Coll. Cardiol. 60, 841-850 (2012).
-
(2012)
J. Am. Coll. Cardiol.
, vol.60
, pp. 841-850
-
-
Jamshidi, Y.1
Nolte, I.M.2
Dalageorgou, C.3
-
53
-
-
84902245734
-
An enhancer polymorphism at the cardiomyocyte intercalated disc protein NOS1AP locus is a major regulator of the QT interval
-
Kapoor A, Sekar RB, Hansen N An enhancer polymorphism at the cardiomyocyte intercalated disc protein NOS1AP locus is a major regulator of the QT interval. Am. J. Human Genet. 94, 854-869 (2014).
-
(2014)
Am. J. Human Genet.
, vol.94
, pp. 854-869
-
-
Kapoor, A.1
Sekar, R.B.2
Hansen, N.3
-
54
-
-
77953144675
-
Priori polymorphisms in the NOS1AP gene modulate QT interval duration and risk of arrhythmias in the long QT syndrome
-
Tomás M, Napolitano C, L De Giuli et al. Priori polymorphisms in the NOS1AP gene modulate QT interval duration and risk of arrhythmias in the long QT syndrome. J. Am. Coll. Cardiol. 55, 2745-2752 (2010).
-
(2010)
J. Am. Coll. Cardiol.
, vol.55
, pp. 2745-2752
-
-
Tomás, M.1
Napolitano, C.2
De Giuli, L.3
-
55
-
-
84923362619
-
Integrative analysis of 111 reference human epigenomes
-
Roadmap Epigenomics Consortium, Kundaje A, Meuleman W et al. Integrative analysis of 111 reference human epigenomes. Nature 518, 317-330 (2015).
-
(2015)
Nature
, vol.518
, pp. 317-330
-
-
Epigenomics Consortium, R.1
Kundaje, A.2
Meuleman, W.3
-
56
-
-
84926632357
-
Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues
-
Ernst E, Kellis M. Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues. Nat. Biotechnol. 33, 364-376 (2015).
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 364-376
-
-
Ernst, E.1
Kellis, M.2
-
57
-
-
84890432056
-
Chromatin connectivity maps reveal dynamic promoter-enhancer long-range associations
-
Zhang Y, Wong C-H, Birnbaum RY et al. Chromatin connectivity maps reveal dynamic promoter-enhancer long-range associations. Nature 504, 306-310 (2013).
-
(2013)
Nature
, vol.504
, pp. 306-310
-
-
Zhang, Y.1
Wong, C.-H.2
Birnbaum, R.Y.3
-
58
-
-
0037083376
-
Capturing chromosome conformation
-
Dekker J, Rippe K, Dekker M, Kleckner N. Capturing chromosome conformation. Science 295, 1306-1311 (2002).
-
(2002)
Science
, vol.295
, pp. 1306-1311
-
-
Dekker, J.1
Rippe, K.2
Dekker, M.3
Kleckner, N.4
-
60
-
-
33749400168
-
5C): A massively parallel solution for mapping interactions between genomic elements
-
5C): a massively parallel solution for mapping interactions between genomic elements. Genome Res. 16, 1299-1309 (2006).
-
(2006)
Genome Res.
, vol.16
, pp. 1299-1309
-
-
Dostie, J.1
Richmond, T.A.2
Arnaout, R.A.3
-
61
-
-
84904412804
-
Targeted chromatin capture (T2C): A novel high resolution high throughput method to detect genomic interactions and regulatory elements
-
Kolovos P, van de Werken HJ, Kepper N et al. Targeted chromatin capture (T2C): a novel high resolution high throughput method to detect genomic interactions and regulatory elements. Epigenetics Chromatin 7, 10 (2014).
-
(2014)
Epigenetics Chromatin
, vol.7
, pp. 10
-
-
Kolovos, P.1
Van De Werken, H.J.2
Kepper, N.3
-
62
-
-
84945530956
-
Novel, ligation-free method for identifying chromatin interactions genome-wide
-
CO, USA, 30 March
-
Beagrie RA, Scialdone A, Chotalia M et al. Novel, ligation-free method for identifying chromatin interactions genome-wide. Presented at: Keystone Symposium on Epigenomics Z2:1006, CO, USA, 30 March 2015.
-
(2015)
Presented At: Keystone Symposium on Epigenomics Z2: 1006
-
-
Beagrie, R.A.1
Scialdone, A.2
Chotalia, M.3
-
63
-
-
0017577857
-
High resolution detection of DNA-RNA hybrids in situ by indirect immunofuorescence
-
Rudkin GT, Stollar BD. High resolution detection of DNA-RNA hybrids in situ by indirect immunofuorescence. Nature 265, 472-473 (1977).
-
(1977)
Nature
, vol.265
, pp. 472-473
-
-
Rudkin, G.T.1
Stollar, B.D.2
-
64
-
-
34547633677
-
Genome-wide profles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing
-
Robertson G, Hirst M, Bainbridge M et al. Genome-wide profles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing. Nat. Methods 4, 651-657 (2007).
-
(2007)
Nat. Methods
, vol.4
, pp. 651-657
-
-
Robertson, G.1
Hirst, M.2
Bainbridge, M.3
-
65
-
-
70449103609
-
An oestrogen-receptor-α-bound human chromatin interactome
-
Fullwood MJ, Liu MH, Pan YF et al. An oestrogen-receptor-α-bound human chromatin interactome. Nature 461, 58-64 (2009).
-
(2009)
Nature
, vol.461
, pp. 58-64
-
-
Fullwood, M.J.1
Liu, M.H.2
Pan, Y.F.3
-
66
-
-
30044449116
-
Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)
-
Crawford GE, Holt IE, Whittle J et al. Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS). Genome Res. 16(1), 123-131 (2006).
-
(2006)
Genome Res.
, vol.16
, Issue.1
, pp. 123-131
-
-
Crawford, G.E.1
Holt, I.E.2
Whittle, J.3
-
67
-
-
84887942741
-
Large-scale chromatin organization: The good, the surprising, and the still perplexing
-
Belmont AS. Large-scale chromatin organization: the good, the surprising, and the still perplexing. Curr. Opin. Cell Biol. 26, 69-78 (2014).
-
(2014)
Curr. Opin. Cell Biol.
, vol.26
, pp. 69-78
-
-
Belmont, A.S.1
-
68
-
-
84897446230
-
Enhancer RNAs and regulated transcriptional programs
-
Lam MT, Li W, Rosenfeld MG, Glass CK. Enhancer RNAs and regulated transcriptional programs. Trends Biochem. Sci. 39, 170-182 (2014).
-
(2014)
Trends Biochem. Sci.
, vol.39
, pp. 170-182
-
-
Lam, M.T.1
Li, W.2
Rosenfeld, M.G.3
Glass, C.K.4
-
69
-
-
84930092058
-
Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C
-
Mifsud B, Tavares-Cadete F, Young AN et al. Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C. Nat. Genet. 47(6), 598-606 (2015).
-
(2015)
Nat. Genet.
, vol.47
, Issue.6
, pp. 598-606
-
-
Mifsud, B.1
Tavares-Cadete, F.2
Young, A.N.3
-
70
-
-
84885617426
-
Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
-
Nagano T, Lubling Y, Fraser P et al. Single-cell Hi-C reveals cell-to-cell variability in chromosome structure. Nature 502, 59-63 (2013).
-
(2013)
Nature
, vol.502
, pp. 59-63
-
-
Nagano, T.1
Lubling, Y.2
Fraser, P.3
-
71
-
-
80054993342
-
Spatio-temporal transcriptome of the human brain
-
Kang HJ, Kawasawa YI, Cheng F et al. Spatio-temporal transcriptome of the human brain. Nature 478, 483-489 (2011).
-
(2011)
Nature
, vol.478
, pp. 483-489
-
-
Kang, H.J.1
Kawasawa, Y.I.2
Cheng, F.3
-
72
-
-
84866518216
-
An anatomically comprehensive atlas of the adult human brain transcriptome
-
Hawrylycz MJ, Lein ES, Guillozet-Bongaarts AL et al. An anatomically comprehensive atlas of the adult human brain transcriptome. Nature 489, 391-399 (2012).
-
(2012)
Nature
, vol.489
, pp. 391-399
-
-
Hawrylycz, M.J.1
Lein, E.S.2
Guillozet-Bongaarts, A.L.3
-
73
-
-
11244297914
-
Modular epistasis in yeast metabolism
-
Segrè D, Deluna A, Church GM, Kishony R. Modular epistasis in yeast metabolism. Nat. Genet. 37, 77-83 (2004).
-
(2004)
Nat. Genet.
, vol.37
, pp. 77-83
-
-
Segrè, D.1
Deluna, A.2
Church, G.M.3
Kishony, R.4
-
74
-
-
58149305794
-
An empirical framework for binary interactome mapping
-
Venkatesan K, Rual J-F, Vazquez A et al. An empirical framework for binary interactome mapping. Nat. Methods 6, 83-90 (2009).
-
(2009)
Nat. Methods
, vol.6
, pp. 83-90
-
-
Venkatesan, K.1
Rual, J.-F.2
Vazquez, A.3
-
75
-
-
84857066786
-
Modular regulatory principles of large non-coding RNAs
-
Guttman M, Rinn JL. Modular regulatory principles of large non-coding RNAs. Nature 482, 339-346 (2012).
-
(2012)
Nature
, vol.482
, pp. 339-346
-
-
Guttman, M.1
Rinn, J.L.2
-
76
-
-
84920733410
-
Biased allelic expression in human primary fbroblast single cells
-
Borel C, Ferreira PG, Santoni F et al. Biased allelic expression in human primary fbroblast single cells. Am. J. Human Genet. 96, 1-11 (2015).
-
(2015)
Am. J. Human Genet.
, vol.96
, pp. 1-11
-
-
Borel, C.1
Ferreira, P.G.2
Santoni, F.3
-
77
-
-
84882455458
-
Single-cell sequencing-based technologies will revolutionize whole-organism science
-
Shapiro E, Biezuner T, Linnarsson S. Single-cell sequencing-based technologies will revolutionize whole-organism science. Nat. Rev. Genet. 14, 618-630 (2013).
-
(2013)
Nat. Rev. Genet.
, vol.14
, pp. 618-630
-
-
Shapiro, E.1
Biezuner, T.2
Linnarsson, S.3
-
78
-
-
84922584195
-
Single-cell, genome-wide sequencing identifes clonal somatic copy-number variation in the human brain
-
Cai X, Evrony GD, Lehmann HS et al. Single-cell, genome-wide sequencing identifes clonal somatic copy-number variation in the human brain. Cell Rep. 8, 1280-1289 (2014).
-
(2014)
Cell Rep.
, vol.8
, pp. 1280-1289
-
-
Cai, X.1
Evrony, G.D.2
Lehmann, H.S.3
-
79
-
-
79960796417
-
Exploiting drug-disease relationships for computational drug repositioning
-
Dudley JT, Deshpande T, Butte AJ. Exploiting drug-disease relationships for computational drug repositioning. Brief. Bioinform. 12, 303-311 (2011).
-
(2011)
Brief. Bioinform.
, vol.12
, pp. 303-311
-
-
Dudley, J.T.1
Deshpande, T.2
Butte, A.J.3
|