메뉴 건너뛰기




Volumn 31, Issue 17, 2015, Pages 2860-2866

The SwissLipids knowledgebase for lipid biology

Author keywords

[No Author keywords available]

Indexed keywords

LIPID;

EID: 84940741482     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv285     Document Type: Article
Times cited : (101)

References (50)
  • 1
    • 84864434718 scopus 로고    scopus 로고
    • Expasy: Sib bioinformatics resource portal
    • Artimo P., et al. (2012). ExPASy: SIB bioinformatics resource portal. Nucleic Acids Res., 40, W597-W603
    • (2012) Nucleic Acids Res , vol.40 , pp. W597-W603
    • Artimo, P.1
  • 2
    • 84880962133 scopus 로고    scopus 로고
    • Phosphoinositides: Tiny lipids with giant impact on cell regulation
    • Balla T. (2013). Phosphoinositides: tiny lipids with giant impact on cell regulation. Physiol. Rev., 93, 1019-1137
    • (2013) Physiol. Rev , vol.93 , pp. 1019-1137
    • Balla, T.1
  • 3
    • 84884560388 scopus 로고    scopus 로고
    • Using neurolipidomics to identify phospholipid mediators of synaptic (dys)function in Alzheimer's disease
    • Bennett S.A., et al. (2014). Using neurolipidomics to identify phospholipid mediators of synaptic (dys)function in Alzheimer's Disease. Front. Physiol., 4, 168
    • (2014) Front. Physiol , vol.4 , pp. 168
    • Bennett, S.A.1
  • 4
    • 84892989181 scopus 로고    scopus 로고
    • Reconciliation of metabolites, and biochemical reactions for metabolic networks
    • Bernard T., et al. (2014). Reconciliation of metabolites, and biochemical reactions for metabolic networks. Brief. Bioinform., 15, 123-135
    • (2014) Brief. Bioinform , vol.15 , pp. 123-135
    • Bernard, T.1
  • 5
    • 84874253819 scopus 로고    scopus 로고
    • Gene ontology annotations, and resources
    • Blake J.A., et al. (2013). Gene Ontology annotations, and resources. Nucleic Acids Res., 41, D530-D535
    • (2013) Nucleic Acids Res , vol.41 , pp. D530-D535
    • Blake, J.A.1
  • 6
    • 84872587392 scopus 로고    scopus 로고
    • Visualization, and phospholipid identification (valid): Online integrated search engine capable of identifying, and visualizing glycerophospholipids with given mass
    • Blanchard A.P., et al. (2013). Visualization, and Phospholipid Identification (VaLID): online integrated search engine capable of identifying, and visualizing glycerophospholipids with given mass. Bioinformatics, 29, 284-285
    • (2013) Bioinformatics , vol.29 , pp. 284-285
    • Blanchard, A.P.1
  • 7
    • 84891774001 scopus 로고    scopus 로고
    • The metacyc database of metabolic pathways, and enzymes, and the biocyc collection of pathway/genome databases
    • Caspi R., et al. (2014). The MetaCyc database of metabolic pathways, and enzymes, and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Res., 42, D459-D471
    • (2014) Nucleic Acids Res , vol.42 , pp. D459-D471
    • Caspi, R.1
  • 8
    • 84941103395 scopus 로고    scopus 로고
    • Brenda in 2015: Exciting developments in its 25th year of existence
    • Chang A., et al. (2015). BRENDA in 2015: exciting developments in its 25th year of existence. Nucleic Acids Res., 43, D439-D446
    • (2015) Nucleic Acids Res , vol.43 , pp. D439-D446
    • Chang, A.1
  • 9
    • 84987680729 scopus 로고    scopus 로고
    • Standardized description of scientific evidence using the evidence ontology (eco
    • Oxford
    • Chibucos M.C., et al. (2014). Standardized description of scientific evidence using the Evidence Ontology (ECO). Database (Oxford), 2014 doi: 10.1093/database/bau075
    • (2014) Database , vol.2014
    • Chibucos, M.C.1
  • 10
    • 84891753483 scopus 로고    scopus 로고
    • The Reactome pathway knowledgebase
    • Croft D., et al. (2014). The Reactome pathway knowledgebase. Nucleic Acids Res., 42, D472-D477
    • (2014) Nucleic Acids Res , vol.42 , pp. D472-D477
    • Croft, D.1
  • 11
    • 84908148869 scopus 로고    scopus 로고
    • Systematic lipidomic analysis of yeast protein kinase, and phosphatase mutants reveals novel insights into regulation of lipid homeostasis
    • da Silveira Dos Santos A.X., et al. (2014). Systematic lipidomic analysis of yeast protein kinase, and phosphatase mutants reveals novel insights into regulation of lipid homeostasis. Mol. Biol. Cell, 25, 3234-3246
    • (2014) Mol. Biol. Cell , vol.25 , pp. 3234-3246
    • Da Silveira, D.1    Santos, A.X.2
  • 12
    • 34547556301 scopus 로고    scopus 로고
    • Lipid maps online tools for lipid research
    • Fahy E., et al. (2007). LIPID MAPS online tools for lipid research. Nucleic Acids Res., 35, W606-W612
    • (2007) Nucleic Acids Res , vol.35 , pp. W606-W612
    • Fahy, E.1
  • 13
    • 9144253910 scopus 로고    scopus 로고
    • Intenz, the integrated relational enzyme database
    • Fleischmann A., et al. (2004). IntEnz, the integrated relational enzyme database. Nucleic Acids Res., 32, D434-D437
    • (2004) Nucleic Acids Res , vol.32 , pp. D434-D437
    • Fleischmann, A.1
  • 14
    • 84877150075 scopus 로고    scopus 로고
    • Lipidhome: A database of theoretical lipids optimized for high throughput mass spectrometry lipidomics
    • Foster J.M., et al. (2013). LipidHome: a database of theoretical lipids optimized for high throughput mass spectrometry lipidomics. PLoS One, 8, e61951
    • (2013) Plos One , vol.8 , pp. e61951
    • Foster, J.M.1
  • 15
    • 84875144546 scopus 로고    scopus 로고
    • Metanetx.org: A website, and repository for accessing, analysing, and manipulating metabolic networks
    • Ganter M., et al. (2013). MetaNetX.org: a website, and repository for accessing, analysing, and manipulating metabolic networks. Bioinformatics, 29, 815-816
    • (2013) Bioinformatics , vol.29 , pp. 815-816
    • Ganter, M.1
  • 16
    • 67650669263 scopus 로고    scopus 로고
    • Top-down lipidomics reveals ether lipid deficiency in blood plasma of hypertensive patients
    • Graessler J., et al. (2009). Top-down lipidomics reveals ether lipid deficiency in blood plasma of hypertensive patients. PLoS One, 4, e6261
    • (2009) Plos One , vol.4 , pp. e6261
    • Graessler, J.1
  • 17
    • 79953049294 scopus 로고    scopus 로고
    • Lipidomics at the interface of structure, and function in systems biology
    • Gross R.W., and Han X. (2011). Lipidomics at the interface of structure, and function in systems biology. Chem. Biol., 18, 284-291
    • (2011) Chem. Biol , vol.18 , pp. 284-291
    • Gross, R.W.1    Han, X.2
  • 18
    • 79951541434 scopus 로고    scopus 로고
    • Lipid data analyzer: Unattended identification, and quantitation of lipids in lc-ms data
    • Hartler J., et al. (2011). Lipid Data Analyzer: unattended identification, and quantitation of lipids in LC-MS data. Bioinformatics, 27, 572-577
    • (2011) Bioinformatics , vol.27 , pp. 572-577
    • Hartler, J.1
  • 19
    • 84876560358 scopus 로고    scopus 로고
    • The chebi reference database, and ontology for biologically relevant chemistry: Enhancements for 2013
    • Hastings J., et al. (2013). The ChEBI reference database, and ontology for biologically relevant chemistry: enhancements for 2013. Nucleic Acids Res., 41, D456-D463
    • (2013) Nucleic Acids Res , vol.41 , pp. D456-D463
    • Hastings, J.1
  • 20
    • 84876560030 scopus 로고    scopus 로고
    • MetaboLights-an open-access general-purpose repository for metabolomics studies, and associated meta-data
    • Haug K., et al. (2013). MetaboLights-an open-access general-purpose repository for metabolomics studies, and associated meta-data. Nucleic Acids Res., 41, D781-D786
    • (2013) Nucleic Acids Res , vol.41 , pp. D781-D786
    • Haug, K.1
  • 21
    • 84876725194 scopus 로고    scopus 로고
    • Inchi - The worldwide chemical structure identifier standard
    • Heller S., et al. (2013). InChI - the worldwide chemical structure identifier standard. J. Cheminform., 5, 7
    • (2013) J. Cheminform , vol.5 , pp. 7
    • Heller, S.1
  • 22
    • 84855855094 scopus 로고    scopus 로고
    • Lipidxplorer: A software for consensual cross-platform lipidomics
    • Herzog R., et al. (2013). LipidXplorer: a software for consensual cross-platform lipidomics. PLoS One, 7, e29851
    • (2013) Plos One , vol.7 , pp. e29851
    • Herzog, R.1
  • 23
    • 84901935763 scopus 로고    scopus 로고
    • Lipid landscapes, and pipelines in membrane homeostasis
    • Holthuis J.C., and Menon A.K. (2014). Lipid landscapes, and pipelines in membrane homeostasis. Nature, 510, 48-57
    • (2014) Nature , vol.510 , pp. 48-57
    • Holthuis, J.C.1    Menon, A.K.2
  • 24
    • 82455192824 scopus 로고    scopus 로고
    • Emerging roles of resolvins in the resolution of inflammation, and pain
    • Ji R.R., et al. (2011). Emerging roles of resolvins in the resolution of inflammation, and pain. Trends Neurosci., 34, 599-609
    • (2011) Trends Neurosci , vol.34 , pp. 599-609
    • Ji, R.R.1
  • 25
    • 84891760956 scopus 로고    scopus 로고
    • Data, information, knowledge, and principle: Back to metabolism in kegg
    • Kanehisa M., et al. (2014). Data, information, knowledge, and principle: back to metabolism in KEGG. Nucleic Acids Res., 42, D199-D205
    • (2014) Nucleic Acids Res , vol.42 , pp. D199-D205
    • Kanehisa, M.1
  • 26
    • 84881476562 scopus 로고    scopus 로고
    • Lipidblast in silico tandem mass spectrometry database for lipid identification
    • Kind T., et al. (2013). LipidBlast in silico tandem mass spectrometry database for lipid identification. Nat. Methods, 10, 755-758
    • (2013) Nat. Methods , vol.10 , pp. 755-758
    • Kind, T.1
  • 27
    • 84893387992 scopus 로고    scopus 로고
    • The autotaxin-LPA axis emerges as a novel regulator of lymphocyte homing, and inflammation
    • Knowlden S., and Georas S.N. (2014). The autotaxin-LPA axis emerges as a novel regulator of lymphocyte homing, and inflammation. J. Immunol., 192, 851-857
    • (2014) J. Immunol , vol.192 , pp. 851-857
    • Knowlden, S.1    Georas, S.N.2
  • 28
    • 78650107057 scopus 로고    scopus 로고
    • Lipolysis - A highly regulated multi-enzyme complex mediates the catabolism of cellular fat stores
    • Lass A., et al. (2011). Lipolysis - a highly regulated multi-enzyme complex mediates the catabolism of cellular fat stores. Prog. Lipid Res., 50, 14-27
    • (2011) Prog. Lipid Res , vol.50 , pp. 14-27
    • Lass, A.1
  • 29
    • 84877106380 scopus 로고    scopus 로고
    • Shorthand notation for lipid structures derived from mass spectrometry
    • Liebisch G., et al. (2013). Shorthand notation for lipid structures derived from mass spectrometry. J. Lipid Res., 54, 1523-1530
    • (2013) J. Lipid Res , vol.54 , pp. 1523-1530
    • Liebisch, G.1
  • 30
    • 84919342501 scopus 로고    scopus 로고
    • Hcv 3a core protein increases lipid droplet cholesteryl ester content via a mechanism dependent on sphingolipid biosynthesis
    • Loizides-Mangold U., et al. (2014). HCV 3a core protein increases lipid droplet cholesteryl ester content via a mechanism dependent on sphingolipid biosynthesis. PLoS One, 9, e115309
    • (2014) Plos One , vol.9 , pp. e115309
    • Loizides-Mangold, U.1
  • 31
    • 84897376553 scopus 로고    scopus 로고
    • Stearoyl-coa desaturase inhibition blocks formation of hepatitis c virus-induced specialized membranes
    • Lyn R.K.et al. (2014). Stearoyl-CoA desaturase inhibition blocks formation of hepatitis C virus-induced specialized membranes. Sci. Rep., 4, 4549
    • (2014) Sci. Rep , vol.4 , pp. 4549
    • Lyn, R.K.1
  • 32
    • 84898447902 scopus 로고    scopus 로고
    • Plasma phospholipids identify antecedent memory impairment in older adults
    • Mapstone M., et al. (2014). Plasma phospholipids identify antecedent memory impairment in older adults. Nat. Med., 20, 415-418
    • (2014) Nat. Med , vol.20 , pp. 415-418
    • Mapstone, M.1
  • 33
    • 84884678009 scopus 로고    scopus 로고
    • Plasma lipid profiling shows similar associations with prediabetes, and type 2 diabetes
    • Meikle P.J., et al. (2014). Plasma lipid profiling shows similar associations with prediabetes, and type 2 diabetes. PLoS One, 8, e74341
    • (2014) Plos One , vol.8 , pp. e74341
    • Meikle, P.J.1
  • 34
    • 84890509587 scopus 로고    scopus 로고
    • Sphingosine 1-phosphate signalling
    • Mendelson K., et al. (2014). Sphingosine 1-phosphate signalling. Development, 141, 5-9
    • (2014) Development , vol.141 , pp. 5-9
    • Mendelson, K.1
  • 35
    • 84871720518 scopus 로고    scopus 로고
    • Ceramide-orchestrated signalling in cancer cells
    • Morad S.A., and Cabot M.C. (2013). Ceramide-orchestrated signalling in cancer cells. Nat. Rev. Cancer, 13, 51-65
    • (2013) Nat. Rev. Cancer , vol.13 , pp. 51-65
    • Morad, S.A.1    Cabot, M.C.2
  • 36
    • 84941097826 scopus 로고    scopus 로고
    • Updates in rhea-a manually curated resource of biochemical reactions
    • Morgat A., et al. (2015). Updates in Rhea-a manually curated resource of biochemical reactions. Nucleic Acids Res., 43, D459-D464
    • (2015) Nucleic Acids Res , vol.43 , pp. D459-D464
    • Morgat, A.1
  • 37
    • 84856316836 scopus 로고    scopus 로고
    • Uberon, an integrative multi-species anatomy ontology
    • Mungall C.J., et al. (2012). Uberon, an integrative multi-species anatomy ontology. Genome Biol., 13, R5
    • (2012) Genome Biol , vol.13 , pp. R5
    • Mungall, C.J.1
  • 38
    • 84891804649 scopus 로고    scopus 로고
    • Database resources of the national center for biotechnology information
    • NCBI Resource Coordinators. (2014). Database resources of the National Center for Biotechnology Information. Nucleic Acids Res., 42, D7-D17
    • (2014) Nucleic Acids Res , vol.42 , pp. D7-D17
    • Resource Coordinators, N.1
  • 39
    • 77954772536 scopus 로고    scopus 로고
    • Mzmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
    • Pluskal T., et al. (2010). MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data. BMC Bioinformatics, 11, 395
    • (2010) BMC Bioinformatics , vol.11 , pp. 395
    • Pluskal, T.1
  • 40
    • 34250656225 scopus 로고    scopus 로고
    • Smilib v2.0: A Java-based tool for rapid combinatorial library enumeration
    • Schüller A., et al. (2007). SmiLib v2.0: a java-based tool for rapid combinatorial library enumeration. QSAR Comb. Sci., 26, 407-410
    • (2007) QSAR Comb. Sci , vol.26 , pp. 407-410
    • Schüller, A.1
  • 41
    • 77954956306 scopus 로고    scopus 로고
    • Lipidomics: Coming to grips with lipid diversity
    • Shevchenko A., and Simons K. (2010). Lipidomics: coming to grips with lipid diversity. Nat. Rev. Mol. Cell Biol., 11, 593-598
    • (2010) Nat. Rev. Mol. Cell Biol , vol.11 , pp. 593-598
    • Shevchenko, A.1    Simons, K.2
  • 42
    • 84898447659 scopus 로고    scopus 로고
    • Glycerophospholipid, and sphingolipid species, and mortality: The ludwigshafen risk, and cardiovascular health (luric) study
    • Sigruener A., et al. (2014). Glycerophospholipid, and sphingolipid species, and mortality: the Ludwigshafen Risk, and Cardiovascular Health (LURIC) study. PLoS One, 9, e85724
    • (2014) Plos One , vol.9 , pp. e85724
    • Sigruener, A.1
  • 43
    • 84896546877 scopus 로고    scopus 로고
    • Sphingosine-1-phosphate: A master regulator of lymphocyte egress, and immunity
    • Simmons S., and Ishii M. (2014). Sphingosine-1-phosphate: a master regulator of lymphocyte egress, and immunity. Arch. Immunol. Ther. Exp. (Warsz), 62, 103-115
    • (2014) Arch. Immunol. Ther. Exp. (Warsz , vol.62 , pp. 103-115
    • Simmons, S.1    Ishii, M.2
  • 44
    • 33846058198 scopus 로고    scopus 로고
    • Lmsd: Lipid maps structure database
    • Sud M., et al. (2007). LMSD: LIPID MAPS structure database. Nucleic Acids Res., 35, D527-D532
    • (2007) Nucleic Acids Res , vol.35 , pp. D527-D532
    • Sud, M.1
  • 45
    • 84891783174 scopus 로고    scopus 로고
    • Activities at the universal protein resource (uniprot
    • UniProt Consortium. (2014). Activities at the universal protein resource (UniProt). Nucleic Acids Res., 42, D191-D198
    • (2014) Nucleic Acids Res , vol.42 , pp. D191-D198
    • Consortium, U.1
  • 46
    • 84876580700 scopus 로고    scopus 로고
    • MicroScope-an integrated microbial resource for the curation, and comparative analysis of genomic, and metabolic data
    • Vallenet D., et al. (2013). MicroScope-an integrated microbial resource for the curation, and comparative analysis of genomic, and metabolic data. Nucleic Acids Res., 41, D636-D647
    • (2013) Nucleic Acids Res , vol.41 , pp. D636-D647
    • Vallenet, D.1
  • 47
    • 38549173564 scopus 로고    scopus 로고
    • Membrane lipids: Where they are, and how they behave
    • van Meer G., et al. (2008). Membrane lipids: where they are, and how they behave. Nat. Rev. Mol. Cell Biol., 9, 112-124
    • (2008) Nat. Rev. Mol. Cell Biol , vol.9 , pp. 112-124
    • Van Meer, G.1
  • 48
    • 0023965741 scopus 로고
    • Smiles, a chemical language, and information system 1 introduction to methodology, and encoding rules
    • Weininger D. (1988). SMILES, a chemical language, and information system. 1. Introduction to methodology, and encoding rules. J. Chem. Inform. Comput. Sci., 28, 31-36
    • (1988) J. Chem. Inform. Comput. Sci , vol.28 , pp. 31-36
    • Weininger, D.1
  • 49
    • 84876148784 scopus 로고    scopus 로고
    • Hmdb 3.0-the human metabolome database in 2013
    • Wishart D.S., et al. (2013). HMDB 3.0-The Human Metabolome Database in 2013. Nucleic Acids Res., 41, D801-D807
    • (2013) Nucleic Acids Res , vol.41 , pp. D801-D807
    • Wishart, D.S.1
  • 50
    • 34547825554 scopus 로고    scopus 로고
    • Bioinformatics strategies for lipidomics analysis: Characterization of obesity related hepatic steatosis
    • Yetukuri L., et al. (2007). Bioinformatics strategies for lipidomics analysis: characterization of obesity related hepatic steatosis. BMC Syst. Biol., 1, 12
    • (2007) BMC Syst. Biol , vol.1 , pp. 12
    • Yetukuri, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.