-
1
-
-
33847421719
-
Meet the human metabolome
-
Pearson, H. (2007) Meet the human metabolome. Nature, 446, 8.
-
(2007)
Nature
, vol.446
, pp. 8
-
-
Pearson, H.1
-
2
-
-
84871827080
-
-
website (29 August 2012, date last accessed)
-
The Human Metabolome Project website http://www.metabolomics.ca/ (29 August 2012, date last accessed).
-
The Human Metabolome Project
-
-
-
3
-
-
33846088138
-
HMDB: The human metabolome database
-
Wishart, D.S., Tzur, D., Knox, C., Eisner, R., Guo, A.C., Young, N., Cheng, D., Jewell, K., Arndt, D., Sawhney, S. et al. (2007) HMDB: the Human Metabolome Database. Nucleic Acids Res., 35, D521-D526.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Wishart, D.S.1
Tzur, D.2
Knox, C.3
Eisner, R.4
Guo, A.C.5
Young, N.6
Cheng, D.7
Jewell, K.8
Arndt, D.9
Sawhney, S.10
-
4
-
-
58149202163
-
HMDB: A knowledgebase for the human metabolome
-
Wishart, D.S., Knox, C., Guo, A.C., Eisner, R., Young, N., Gautam, B., Hau, D.D., Psychogios, N., Dong, E., Bouatra, S. et al. (2009) HMDB: a knowledgebase for the human metabolome. Nucleic Acids Res., 37, D603-D610.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Wishart, D.S.1
Knox, C.2
Guo, A.C.3
Eisner, R.4
Young, N.5
Gautam, B.6
Hau, D.D.7
Psychogios, N.8
Dong, E.9
Bouatra, S.10
-
5
-
-
32444432587
-
METLIN: A metabolite mass spectral database
-
Smith, C.A., O'Maille, G., Want, E.J., Qin, C., Trauger, S.A., Brandon, T.R., Custodio, D.E., Abagyan, R. and Siuzdak, G. (2005) METLIN: a metabolite mass spectral database. Ther. Drug Monit., 27, 747-751.
-
(2005)
Ther. Drug Monit.
, vol.27
, pp. 747-751
-
-
Smith, C.A.1
O'Maille, G.2
Want, E.J.3
Qin, C.4
Trauger, S.A.5
Brandon, T.R.6
Custodio, D.E.7
Abagyan, R.8
Siuzdak, G.9
-
6
-
-
34547556301
-
LIPID MAPS online tools for lipid research
-
Fahy, E., Sud, M., Cotter, D. and Subramaniam, S. (2007) LIPID MAPS online tools for lipid research. Nucleic Acids Res., 35, W606-W612.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Fahy, E.1
Sud, M.2
Cotter, D.3
Subramaniam, S.4
-
7
-
-
84858983547
-
KEGG for integration and interpretation of large-scale molecular data sets
-
Kanehisa, M., Goto, S., Sato, Y., Furumichi, M. and Tanabe, M. (2012) KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Res., 40, D109-D114.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Kanehisa, M.1
Goto, S.2
Sato, Y.3
Furumichi, M.4
Tanabe, M.5
-
8
-
-
14844326483
-
Computational prediction of human metabolic pathways from the complete human genome
-
Romero, P., Wagg, J., Green, M.L., Kaiser, D., Krummenacker, M. and Karp, P.D. (2005) Computational prediction of human metabolic pathways from the complete human genome. Genome Biol., 6, R2.
-
(2005)
Genome Biol.
, vol.6
-
-
Romero, P.1
Wagg, J.2
Green, M.L.3
Kaiser, D.4
Krummenacker, M.5
Karp, P.D.6
-
9
-
-
33846910173
-
Global reconstruction of the human metabolic network based on genomic and bibliomic data
-
Duarte, N.C., Becker, S.A., Jamshidi, N., Thiele, I., Mo, M.L., Vo, T.D., Srivas, R. and Palsson, B.Ø. (2007) Global reconstruction of the human metabolic network based on genomic and bibliomic data. Proc. Natl Acad. Sci. USA, 104, 1777-1782.
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 1777-1782
-
-
Duarte, N.C.1
Becker, S.A.2
Jamshidi, N.3
Thiele, I.4
Mo, M.L.5
Vo, T.D.6
Srivas, R.7
Palsson, B.O.8
-
10
-
-
78649633211
-
PubChem as a public resource for drug discovery
-
Li, Q., Cheng, T., Wang, Y. and Bryant, S.H. (2010) PubChem as a public resource for drug discovery. Drug Discov. Today, 15, 1052-1057.
-
(2010)
Drug Discov. Today
, vol.15
, pp. 1052-1057
-
-
Li, Q.1
Cheng, T.2
Wang, Y.3
Bryant, S.H.4
-
11
-
-
75549092202
-
Chemical entities of biological interest: An update
-
de Matos, P., Alcantara, R., Dekker, A., Ennis, M., Hastings, J., Haug, K., Spiteri, I., Turner, S. and Steinbeck, C. (2010) Chemical entities of biological interest: an update. Nucleic Acids Res., 38, D249-D254.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
De Matos, P.1
Alcantara, R.2
Dekker, A.3
Ennis, M.4
Hastings, J.5
Haug, K.6
Spiteri, I.7
Turner, S.8
Steinbeck, C.9
-
12
-
-
38549138986
-
BioMagResBank
-
Ulrich, E.L., Akutsu, H., Doreleijers, J.F., Harano, Y., Ioannidis, Y.E., Lin, J., Livny, M., Mading, S., Maziuk, D., Miller, Z. et al. (2008) BioMagResBank. Nucleic Acids Res., 36, D402-D408.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Ulrich, E.L.1
Akutsu, H.2
Doreleijers, J.F.3
Harano, Y.4
Ioannidis, Y.E.5
Lin, J.6
Livny, M.7
Mading, S.8
Maziuk, D.9
Miller, Z.10
-
13
-
-
77954439868
-
MassBank: A public repository for sharing mass spectral data for life sciences
-
Horai, H., Arita, M., Kanaya, S., Nihei, Y., Ikeda, T., Suwa, K., Ojima, Y., Tanaka, K., Tanaka, S., Aoshima, K. et al. (2010) MassBank: a public repository for sharing mass spectral data for life sciences. J. Mass Spectrom., 45, 703-714.
-
(2010)
J. Mass Spectrom.
, vol.45
, pp. 703-714
-
-
Horai, H.1
Arita, M.2
Kanaya, S.3
Nihei, Y.4
Ikeda, T.5
Suwa, K.6
Ojima, Y.7
Tanaka, K.8
Tanaka, S.9
Aoshima, K.10
-
14
-
-
75549091977
-
SMPDB: The small molecule pathway database
-
Frolkis, A., Knox, C., Lim, E., Jewison, T., Law, V., Hau, D.D., Liu, P., Gautam, B., Ly, S., Guo, A.C. et al. (2010) SMPDB: the small molecule pathway database. Nucleic Acids Res., 38, D480-D487.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Frolkis, A.1
Knox, C.2
Lim, E.3
Jewison, T.4
Law, V.5
Hau, D.D.6
Liu, P.7
Gautam, B.8
Ly, S.9
Guo, A.C.10
-
15
-
-
84860490976
-
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
-
Caspi, R., Altman, T., Dreher, K., Fulcher, C.A., Subhraveti, P., Keseler, I.M., Kothari, A., Krummenacker, M., Latendresse, M., Mueller, L.A. et al. (2012) The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res., 40, D742-D753.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Caspi, R.1
Altman, T.2
Dreher, K.3
Fulcher, C.A.4
Subhraveti, P.5
Keseler, I.M.6
Kothari, A.7
Krummenacker, M.8
Latendresse, M.9
Mueller, L.A.10
-
16
-
-
84860424898
-
Multi-platform characterization of the human cerebrospinal fluid metabolome: A comprehensive and quantitative update
-
Mandal, R., Guo, A.C., Chaudhary, K.K., Liu, P., Yallou, F.S., Dong, E., Aziat, F. and Wishart, D.S. (2012) Multi-platform characterization of the human cerebrospinal fluid metabolome: a comprehensive and quantitative update. Genome Med., 4, 38.
-
(2012)
Genome Med.
, vol.4
, pp. 38
-
-
Mandal, R.1
Guo, A.C.2
Chaudhary, K.K.3
Liu, P.4
Yallou, F.S.5
Dong, E.6
Aziat, F.7
Wishart, D.S.8
-
17
-
-
79951892537
-
The human serum metabolome
-
Psychogios, N., Hau, D.D., Peng, J., Guo, A.C., Mandal, R., Bouatra, S., Sinelnikov, I., Krishnamurthy, R., Eisner, R., Gautam, B. et al. (2011) The human serum metabolome. PLoS One, 6, e16957.
-
(2011)
PLoS One
, vol.6
-
-
Psychogios, N.1
Hau, D.D.2
Peng, J.3
Guo, A.C.4
Mandal, R.5
Bouatra, S.6
Sinelnikov, I.7
Krishnamurthy, R.8
Eisner, R.9
Gautam, B.10
-
18
-
-
84855564151
-
Prediction of skeletal muscle and fat mass in patients with advanced cancer using a metabolomic approach
-
Stretch, C., Eastman, T., Mandal, R., Eisner, R., Wishart, D.S., Mourtzakis, M., Prado, C.M., Damaraju, S., Ball, R.O., Greiner, R. et al. (2012) Prediction of skeletal muscle and fat mass in patients with advanced cancer using a metabolomic approach. J. Nutr., 142, 14-21.
-
(2012)
J. Nutr.
, vol.142
, pp. 14-21
-
-
Stretch, C.1
Eastman, T.2
Mandal, R.3
Eisner, R.4
Wishart, D.S.5
Mourtzakis, M.6
Prado, C.M.7
Damaraju, S.8
Ball, R.O.9
Greiner, R.10
-
19
-
-
70049102530
-
Understanding the human salivary metabolome
-
Takeda, I., Stretch, C., Barnaby, P., Bhatnager, K., Rankin, K., Fu, H., Weljie, A., Jha, N. and Slupsky, C. (2009) Understanding the human salivary metabolome. NMR Biomed., 22, 577-584.
-
(2009)
NMR Biomed.
, vol.22
, pp. 577-584
-
-
Takeda, I.1
Stretch, C.2
Barnaby, P.3
Bhatnager, K.4
Rankin, K.5
Fu, H.6
Weljie, A.7
Jha, N.8
Slupsky, C.9
-
20
-
-
60149091657
-
Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression
-
Sreekumar, A., Poisson, L.M., Rajendiran, T.M., Khan, A.P., Cao, Q., Yu, J., Laxman, B., Mehra, R., Lonigro, R.J., Li, Y. et al. (2009) Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. Nature, 457, 910-914.
-
(2009)
Nature
, vol.457
, pp. 910-914
-
-
Sreekumar, A.1
Poisson, L.M.2
Rajendiran, T.M.3
Khan, A.P.4
Cao, Q.5
Yu, J.6
Laxman, B.7
Mehra, R.8
Lonigro, R.J.9
Li, Y.10
-
21
-
-
48949104656
-
MzML: A single, unifying data format for mass spectrometer output
-
Deutsch, E. (2008) mzML: a single, unifying data format for mass spectrometer output. Proteomics, 8, 2776-2777.
-
(2008)
Proteomics
, vol.8
, pp. 2776-2777
-
-
Deutsch, E.1
|