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Volumn 8, Issue 5, 2013, Pages

LipidHome: A Database of Theoretical Lipids Optimized for High Throughput Mass Spectrometry Lipidomics

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOINFORMATICS; CHEMICAL STRUCTURE; COMPUTER AIDED DESIGN; COMPUTER SIMULATION; CONCEPTUAL FRAMEWORK; CONTROLLED STUDY; FACTUAL DATABASE; INTERNET; ISOMERIZATION; LIPID ANALYSIS; LIPID COMPOSITION; LIPIDHOME DATABASE; LIPIDOMICS; MOLECULAR DYNAMICS; PROTEIN DATABASE; PROTEIN LIPID INTERACTION; REPRODUCIBILITY; WEB BROWSER;

EID: 84877150075     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0061951     Document Type: Article
Times cited : (59)

References (29)
  • 2
    • 79960114429 scopus 로고    scopus 로고
    • Metabolomics in early Alzheimer's disease: identification of altered plasma sphingolipidome using shotgun lipidomics
    • Han X, Rozen S, Boyle SH, Hellegers C, Cheng H, et al. (2011) Metabolomics in early Alzheimer's disease: identification of altered plasma sphingolipidome using shotgun lipidomics. PloS ONE 6(7): e21643.
    • (2011) PloS ONE , vol.6 , Issue.7
    • Han, X.1    Rozen, S.2    Boyle, S.H.3    Hellegers, C.4    Cheng, H.5
  • 3
    • 79961211515 scopus 로고    scopus 로고
    • Increased diacylglycerols characterize hepatic lipid changes in progression of human nonalcoholic fatty liver disease; comparison to a murine model
    • Gorden DL, Ivanova PT, Myers DS, McIntyre JO, VanSaun MN, et al. (2011) Increased diacylglycerols characterize hepatic lipid changes in progression of human nonalcoholic fatty liver disease; comparison to a murine model. PLoS ONE 6(8): e22775.
    • (2011) PLoS ONE , vol.6 , Issue.8
    • Gorden, D.L.1    Ivanova, P.T.2    Myers, D.S.3    McIntyre, J.O.4    VanSaun, M.N.5
  • 4
    • 80755147179 scopus 로고    scopus 로고
    • Application of plasma lipidomics in studying the response of patients with essential hypertension to antihypertensive drug therapy
    • Hu C, Kong H, Qu F, Li Y, Yu Z, et al. (2011) Application of plasma lipidomics in studying the response of patients with essential hypertension to antihypertensive drug therapy. Molecular bioSystems 7: 3271-3279.
    • (2011) Molecular BioSystems , vol.7 , pp. 3271-3279
    • Hu, C.1    Kong, H.2    Qu, F.3    Li, Y.4    Yu, Z.5
  • 5
    • 84858079314 scopus 로고    scopus 로고
    • Phospholipids and insulin resistance in psychosis: a lipidomics study of twin pairs discordant for schizophrenia
    • Orešič M, Seppänen-Laakso T, Sun D, Tang J, Therman S, et al. (2012) Phospholipids and insulin resistance in psychosis: a lipidomics study of twin pairs discordant for schizophrenia. Genome Medicine 4: 1.
    • (2012) Genome Medicine , vol.4 , pp. 1
    • Orešič, M.1    Seppänen-Laakso, T.2    Sun, D.3    Tang, J.4    Therman, S.5
  • 6
    • 0028080105 scopus 로고
    • Electrospray ionization mass spectroscopic analysis of human erythrocyte plasma membrane phospholipids
    • Han X, Gross RW, (1994) Electrospray ionization mass spectroscopic analysis of human erythrocyte plasma membrane phospholipids. PNAS 91: 10635-10639.
    • (1994) PNAS , vol.91 , pp. 10635-10639
    • Han, X.1    Gross, R.W.2
  • 7
    • 0028774677 scopus 로고
    • Liquid chromatography/mass spectrometry of phospholipids using electrospray ionization
    • Kim HY, Wang TC, Ma YC, (1994) Liquid chromatography/mass spectrometry of phospholipids using electrospray ionization. Analytical Chemistry 66: 3977-3982.
    • (1994) Analytical Chemistry , vol.66 , pp. 3977-3982
    • Kim, H.Y.1    Wang, T.C.2    Ma, Y.C.3
  • 9
    • 84860833500 scopus 로고    scopus 로고
    • Reorganizing the protein space at the Universal Protein Resource (UniProt)
    • UniProt Consortium
    • UniProt Consortium, (2012) Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic acids research 40: 71-75.
    • (2012) Nucleic Acids Research , vol.40 , pp. 71-75
  • 10
    • 0026603429 scopus 로고
    • LIPIDAT: A database of lipid phase transition temperatures and enthalpy changes. DMPC data subset analysis
    • Caffrey M, Hogan J, (1992) LIPIDAT: A database of lipid phase transition temperatures and enthalpy changes. DMPC data subset analysis. Chemistry and physics of lipids 61: 1-109.
    • (1992) Chemistry and Physics of Lipids , vol.61 , pp. 1-109
    • Caffrey, M.1    Hogan, J.2
  • 11
    • 0034358321 scopus 로고    scopus 로고
    • How to search the glycolipid data in LIPIDBANK for Web: The newly developed lipid database
    • Watanabe K, Yasugi E, Oshima M, (2000) How to search the glycolipid data in LIPIDBANK for Web: The newly developed lipid database. Japan Trend Glycoscience and Glycotechnology 12: 175-184.
    • (2000) Japan Trend Glycoscience and Glycotechnology , vol.12 , pp. 175-184
    • Watanabe, K.1    Yasugi, E.2    Oshima, M.3
  • 14
    • 77954772536 scopus 로고    scopus 로고
    • MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
    • Pluskal T, Castillo S, Villar-Briones A, Oresic M, (2010) MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data. BMC Bioinformatics 11: 395.
    • (2010) BMC Bioinformatics , vol.11 , pp. 395
    • Pluskal, T.1    Castillo, S.2    Villar-Briones, A.3    Oresic, M.4
  • 15
    • 79951541434 scopus 로고    scopus 로고
    • Lipid Data Analyzer: unattended identification and quantitation of lipids in LC-MS data
    • Hartler J, Trötzmüller M, Chitraju C, Spener F, Köfeler HC, et al. (2010) Lipid Data Analyzer: unattended identification and quantitation of lipids in LC-MS data. Bioinformatics 27(4): 572-577.
    • (2010) Bioinformatics , vol.27 , Issue.4 , pp. 572-577
    • Hartler, J.1    Trötzmüller, M.2    Chitraju, C.3    Spener, F.4    Köfeler, H.C.5
  • 19
    • 67849129096 scopus 로고    scopus 로고
    • Electrospray ionization with low-energy collisionally activated dissociation tandem mass spectrometry of glycerophospholipids: Mechanisms of fragmentation and structural characterization
    • Hsu FF, Turk J, (2009) Electrospray ionization with low-energy collisionally activated dissociation tandem mass spectrometry of glycerophospholipids: Mechanisms of fragmentation and structural characterization. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 877: 2673-2695.
    • (2009) Journal of chromatography. B, Analytical Technologies in the Biomedical and Life Sciences , vol.877 , pp. 2673-2695
    • Hsu, F.F.1    Turk, J.2
  • 21
    • 55149124406 scopus 로고    scopus 로고
    • Elucidation of the double-bond position of longchain unsaturated fatty acids by multiple-stage linear ion-trap mass spectrometry with electrospray ionization
    • Hsu FF, Turk J, (2008) Elucidation of the double-bond position of longchain unsaturated fatty acids by multiple-stage linear ion-trap mass spectrometry with electrospray ionization. Journal of the American Society for Mass Spectrometry 19: 1673-1680.
    • (2008) Journal of the American Society for Mass Spectrometry , vol.19 , pp. 1673-1680
    • Hsu, F.F.1    Turk, J.2
  • 24
    • 84872469846 scopus 로고    scopus 로고
    • Template-based combinatorial enumeration of virtual compound libraries for lipids
    • Sud M, Fahy E, Subramaniam S, (2012) Template-based combinatorial enumeration of virtual compound libraries for lipids. Journal of Chemoinformatics 4: 23.
    • (2012) Journal of Chemoinformatics , vol.4 , pp. 23
    • Sud, M.1    Fahy, E.2    Subramaniam, S.3
  • 25
  • 29
    • 78651275182 scopus 로고    scopus 로고
    • Reactome: A database of reactions, pathways and biological processes
    • Croft D, O'Kelly G, Wu G, Haw R, Gillespie M, et al. (2011) Reactome: A database of reactions, pathways and biological processes. Nucleic acids research 39: 691-697.
    • (2011) Nucleic Acids Research , vol.39 , pp. 691-697
    • Croft, D.1    O'Kelly, G.2    Wu, G.3    Haw, R.4    Gillespie, M.5


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