-
1
-
-
0036007687
-
Metabolomics - The link between genotypes and phenotypes
-
Fiehn, O. (2002) Metabolomics - the link between genotypes and phenotypes. Plant Mol. Biol., 48, 155-171.
-
(2002)
Plant Mol. Biol.
, vol.48
, pp. 155-171
-
-
Fiehn, O.1
-
2
-
-
33747856339
-
Metabolomics: Building on a century of biochemistry to guide human health
-
German, J.B., Hammock, B.D. and Watkins, S.M. (2005) Metabolomics: building on a century of biochemistry to guide human health. Metabolomics, 1, 3-9.
-
(2005)
Metabolomics
, vol.1
, pp. 3-9
-
-
German, J.B.1
Hammock, B.D.2
Watkins, S.M.3
-
3
-
-
33847421719
-
Meet the human metabolome
-
Pearson, H. (2007) Meet the human metabolome. Nature, 446, 8.
-
(2007)
Nature
, vol.446
, pp. 8
-
-
Pearson, H.1
-
4
-
-
77952941236
-
Metabolomic study of the LDL receptor null mouse fed a high-fat diet reveals profound perturbations in choline metabolism that are shared with ApoE null mice
-
Cheng, K.K., Benson, G.M., Grimsditch, D.C., Reid, D.G., Connor, S.C. and Griffin, J.L. (2010) Metabolomic study of the LDL receptor null mouse fed a high-fat diet reveals profound perturbations in choline metabolism that are shared with ApoE null mice. Physiol. Genomics, 41, 224-231.
-
(2010)
Physiol. Genomics
, vol.41
, pp. 224-231
-
-
Cheng, K.K.1
Benson, G.M.2
Grimsditch, D.C.3
Reid, D.G.4
Connor, S.C.5
Griffin, J.L.6
-
5
-
-
81955167437
-
Molecular profiling of marine fauna: Integration of omics with environmental assessment of the world's oceans
-
Veldhoen, N., Ikonomou, M.G. and Helbing, C.C. (2012) Molecular profiling of marine fauna: integration of omics with environmental assessment of the world's oceans. Ecotoxicol. Environ. Saf., 76, 23-38.
-
(2012)
Ecotoxicol. Environ. Saf.
, vol.76
, pp. 23-38
-
-
Veldhoen, N.1
Ikonomou, M.G.2
Helbing, C.C.3
-
6
-
-
2942676743
-
Metabolomics and systems biology: Making sense of the soup
-
Kell, D.B. (2004) Metabolomics and systems biology: making sense of the soup. Curr. Opin. Microbiol., 7, 296-307.
-
(2004)
Curr. Opin. Microbiol.
, vol.7
, pp. 296-307
-
-
Kell, D.B.1
-
7
-
-
58449117420
-
Metabolomics in pharmaceutical research and development: Metabolites, mechanisms and pathways
-
Xu, E.Y., Schaefer, W.H. and Xu, Q.W. (2009) Metabolomics in pharmaceutical research and development: metabolites, mechanisms and pathways. Curr. Opin. Drug Discovery Dev., 12, 40-52.
-
(2009)
Curr. Opin. Drug Discovery Dev.
, vol.12
, pp. 40-52
-
-
Xu, E.Y.1
Schaefer, W.H.2
Xu, Q.W.3
-
8
-
-
27244437784
-
Metabolomics in human nutrition: Opportunities and challenges
-
Gibney, M.J., Walsh, M., Brennan, L., Roche, H.M., German, B. and van Ommen, B. (2005) Metabolomics in human nutrition: opportunities and challenges. Am. J. Clin. Nutrition, 82, 497-503.
-
(2005)
Am. J. Clin. Nutrition
, vol.82
, pp. 497-503
-
-
Gibney, M.J.1
Walsh, M.2
Brennan, L.3
Roche, H.M.4
German, B.5
Van Ommen, B.6
-
9
-
-
41149162296
-
Metabolomics: A global biochemical approach to drug response and disease
-
Kaddurah-Daouk, R., Kristal, B.S. and Weinshilboum, R.M. (2008) Metabolomics: a global biochemical approach to drug response and disease. Annu. Rev. Pharmacol. Toxicol., 48, 653-683.
-
(2008)
Annu. Rev. Pharmacol. Toxicol.
, vol.48
, pp. 653-683
-
-
Kaddurah-Daouk, R.1
Kristal, B.S.2
Weinshilboum, R.M.3
-
10
-
-
1942470073
-
Metabolomics by numbers: Acquiring and understanding global metabolite data
-
Goodacre, R., Vaidyanathan, S., Dunn, W.B., Harrigan, G.G. and Kell, D.B. (2004) Metabolomics by numbers: acquiring and understanding global metabolite data. Trends Biotechnol., 22, 245-252.
-
(2004)
Trends Biotechnol.
, vol.22
, pp. 245-252
-
-
Goodacre, R.1
Vaidyanathan, S.2
Dunn, W.B.3
Harrigan, G.G.4
Kell, D.B.5
-
11
-
-
33846088138
-
HMDB: The human metabolome database
-
Wishart, D.S., Tzur, D., Knox, C., Eisner, R., Guo, A.C., Young, N., Cheng, D., Jewell, K., Arndt, D., Sawhney, S. et al. (2007) HMDB: the human metabolome database. Nucleic Acids Res., 35, D521-D526.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Wishart, D.S.1
Tzur, D.2
Knox, C.3
Eisner, R.4
Guo, A.C.5
Young, N.6
Cheng, D.7
Jewell, K.8
Arndt, D.9
Sawhney, S.10
-
12
-
-
38549138986
-
BioMagResBank
-
Ulrich, E.L., Akutsu, H., Doreleijers, J.F., Harano, Y., Ioannidis, Y.E., Lin, J., Livny, M., Mading, S., Maziuk, D., Miller, Z. et al. (2008) BioMagResBank. Nucleic Acids Res., 36, D402-D408.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Ulrich, E.L.1
Akutsu, H.2
Doreleijers, J.F.3
Harano, Y.4
Ioannidis, Y.E.5
Lin, J.6
Livny, M.7
Mading, S.8
Maziuk, D.9
Miller, Z.10
-
13
-
-
32444432587
-
METLIN: A metabolite mass spectral database
-
Smith, C.A., O'Maille, G., Want, E.J., Qin, C., Trauger, S.A., Brandon, T.R., Custodio, D.E., Abagyan, R. and Siuzdak, G. (2005) METLIN: a metabolite mass spectral database. Ther. Drug Monit., 27, 747-751.
-
(2005)
Ther. Drug Monit.
, vol.27
, pp. 747-751
-
-
Smith, C.A.1
O'Maille, G.2
Want, E.J.3
Qin, C.4
Trauger, S.A.5
Brandon, T.R.6
Custodio, D.E.7
Abagyan, R.8
Siuzdak, G.9
-
14
-
-
33846058198
-
Lmsd: Lipid maps structure database
-
Sud, M., Fahy, E., Cotter, D., Brown, A., Dennis, E.A., Glass, C.K., Merrill, A.H., Murphy, R.C., Raetz, C.R.H., Russell, D.W. et al. (2007) Lmsd: lipid maps structure database. Nucleic Acids Res., 35, D527-D532.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Sud, M.1
Fahy, E.2
Cotter, D.3
Brown, A.4
Dennis, E.A.5
Glass, C.K.6
Merrill, A.H.7
Murphy, R.C.8
Raetz, C.R.H.9
Russell, D.W.10
-
15
-
-
34547778398
-
The metabolomics standards initiative
-
Sansone, S.A., Fan, T., Goodacre, R., Griffin, J.L., Hardy, N.W., Kaddurah-Daouk, R., Kristal, B.S., Lindon, J., Mendes, P., Morrison, N. et al. (2007) The metabolomics standards initiative. Nat. Biotechnol., 25, 846-848.
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 846-848
-
-
Sansone, S.A.1
Fan, T.2
Goodacre, R.3
Griffin, J.L.4
Hardy, N.W.5
Kaddurah-Daouk, R.6
Kristal, B.S.7
Lindon, J.8
Mendes, P.9
Morrison, N.10
-
16
-
-
20244380782
-
Gmd@Csb.Db: The Golm metabolome database
-
Kopka, J., Schauer, N., Krueger, S., Birkemeyer, C., Usadel, B., Bergmuller, E., Dormann, P., Weckwerth, W., Gibon, Y., Stitt, M. et al. (2005) Gmd@Csb.Db: the Golm metabolome database. Bioinformatics, 21, 1635-1638.
-
(2005)
Bioinformatics
, vol.21
, pp. 1635-1638
-
-
Kopka, J.1
Schauer, N.2
Krueger, S.3
Birkemeyer, C.4
Usadel, B.5
Bergmuller, E.6
Dormann, P.7
Weckwerth, W.8
Gibon, Y.9
Stitt, M.10
-
17
-
-
77955396600
-
The MetabolomeExpress Project: Enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datasets
-
Carroll, A.J., Badger, M.R. and Harvey Millar, A. (2010) The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datasets. BMC Bioinformatics, 11, 376.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 376
-
-
Carroll, A.J.1
Badger, M.R.2
Harvey Millar, A.3
-
18
-
-
53249144283
-
PRIMe: A web site that assembles tools for metabolomics and transcriptomics
-
Akiyama, K., Chikayama, E., Yuasa, H., Shimada, Y., Tohge, T., Shinozaki, K., Hirai, M.Y., Sakurai, T., Kikuchi, J. and Saito, K. (2008) PRIMe: a web site that assembles tools for metabolomics and transcriptomics. In Silico Biol., 8, 339-345.
-
(2008)
Silico Biol.
, vol.8
, pp. 339-345
-
-
Akiyama, K.1
Chikayama, E.2
Yuasa, H.3
Shimada, Y.4
Tohge, T.5
Shinozaki, K.6
Hirai, M.Y.7
Sakurai, T.8
Kikuchi, J.9
Saito, K.10
-
19
-
-
75549092202
-
Chemical entities of biological interest: An update
-
de Matos, P., Alcantara, R., Dekker, A., Ennis, M., Hastings, J., Haug, K., Spiteri, I., Turner, S. and Steinbeck, C. (2010) Chemical entities of biological interest: an update. Nucleic Acids Res., 38, D249-D254.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
De Matos, P.1
Alcantara, R.2
Dekker, A.3
Ennis, M.4
Hastings, J.5
Haug, K.6
Spiteri, I.7
Turner, S.8
Steinbeck, C.9
-
20
-
-
34250191844
-
Reactome: A knowledge base of biologic pathways and processes
-
Vastrik, I., D'Eustachio, P., Schmidt, E., Gopinath, G., Croft, D., de Bono, B., Gillespie, M., Jassal, B., Lewis, S., Matthews, L. et al. (2007) Reactome: a knowledge base of biologic pathways and processes. Genome Biol., 8, R39.
-
(2007)
Genome Biol.
, vol.8
-
-
Vastrik, I.1
D'Eustachio, P.2
Schmidt, E.3
Gopinath, G.4
Croft, D.5
De Bono, B.6
Gillespie, M.7
Jassal, B.8
Lewis, S.9
Matthews, L.10
-
21
-
-
84863393183
-
Toward interoperable bioscience data
-
Sansone, S.A., Rocca-Serra, P., Field, D., Maguire, E., Taylor, P., Hofmann, O., Fang, H., Neumann, S., Tong, W., Amaral-Zettler, L. et al. (2012) Toward interoperable bioscience data. Nat. Genet., 44, 121-126.
-
(2012)
Nat. Genet.
, vol.44
, pp. 121-126
-
-
Sansone, S.A.1
Rocca-Serra, P.2
Field, D.3
Maguire, E.4
Taylor, P.5
Hofmann, O.6
Fang, H.7
Neumann, S.8
Tong, W.9
Amaral-Zettler, L.10
-
22
-
-
77956548952
-
ISA software suite: Supporting standards-compliant experimental annotation and enabling curation at the community level
-
Rocca-Serra, P., Brandizi, M., Maguire, E., Sklyar, N., Taylor, C., Begley, K., Field, D., Harris, S., Hide, W., Hofmann, O. et al. (2010) ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level. Bioinformatics, 26, 2354-2356.
-
(2010)
Bioinformatics
, vol.26
, pp. 2354-2356
-
-
Rocca-Serra, P.1
Brandizi, M.2
Maguire, E.3
Sklyar, N.4
Taylor, C.5
Begley, K.6
Field, D.7
Harris, S.8
Hide, W.9
Hofmann, O.10
-
23
-
-
78651082595
-
MzML - A community standard for mass spectrometry data
-
Martens, L., Chambers, M., Sturm, M., Kessner, D., Levander, F., Shofstahl, J., Tang, W.H., Rompp, A., Neumann, S., Pizarro, A.D. et al. (2011) mzML - a community standard for mass spectrometry data. Mol. Cell. Proteomics, 10, R110.000133.
-
(2011)
Mol. Cell. Proteomics
, vol.10
-
-
Martens, L.1
Chambers, M.2
Sturm, M.3
Kessner, D.4
Levander, F.5
Shofstahl, J.6
Tang, W.H.7
Rompp, A.8
Neumann, S.9
Pizarro, A.D.10
-
24
-
-
34748839546
-
Proposed minimum reporting standards for data analysis in metabolomics
-
Goodacre, R., Broadhurst, D., Smilde, A.K., Kristal, B.S., Baker, J.D., Beger, R., Bessant, C., Connor, S., Calmani, G., Craig, A. et al. (2007) Proposed minimum reporting standards for data analysis in metabolomics. Metabolomics, 3, 231-241.
-
(2007)
Metabolomics
, vol.3
, pp. 231-241
-
-
Goodacre, R.1
Broadhurst, D.2
Smilde, A.K.3
Kristal, B.S.4
Baker, J.D.5
Beger, R.6
Bessant, C.7
Connor, S.8
Calmani, G.9
Craig, A.10
-
25
-
-
32444446805
-
XCMS: Processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
-
Smith, C.A., Want, E.J., O'Maille, G., Abagyan, R. and Siuzdak, G. (2006) XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. Anal. Chem., 78, 779-787.
-
(2006)
Anal. Chem.
, vol.78
, pp. 779-787
-
-
Smith, C.A.1
Want, E.J.2
O'Maille, G.3
Abagyan, R.4
Siuzdak, G.5
-
26
-
-
84859935410
-
ELIXIR: A distributed infrastructure for European biological data
-
Crosswell, L.C. and Thornton, J.M. (2012) ELIXIR: a distributed infrastructure for European biological data. Trends Biotechnol., 30, 241-242.
-
(2012)
Trends Biotechnol.
, vol.30
, pp. 241-242
-
-
Crosswell, L.C.1
Thornton, J.M.2
|