메뉴 건너뛰기




Volumn 20, Issue 2, 2015, Pages 323-349

Study strategies for long non-coding RNAs and their roles in regulating gene expression

Author keywords

Bioinformatics; Characterizations; Disease; Functions; Gene expression regulation; High throughput techniques; Higher structure; LncRNAs; Mechanisms

Indexed keywords

LONG UNTRANSLATED RNA;

EID: 84930679084     PISSN: 14258153     EISSN: 16891392     Source Type: Journal    
DOI: 10.1515/cmble-2015-0021     Document Type: Article
Times cited : (7)

References (118)
  • 1
    • 33847698971 scopus 로고    scopus 로고
    • The relationship between nonprotein-coding DNA and eukaryotic complexity
    • Taft, R. J., Pheasant, M. and Mattick, J. S. The relationship between nonprotein-coding DNA and eukaryotic complexity. Bioessays 29 (2007) 288-299. DOI: 10.1002/bies.20544.
    • (2007) Bioessays , vol.29 , pp. 288-299
    • Taft, R.J.1    Pheasant, M.2    Mattick, J.S.3
  • 2
    • 84903817064 scopus 로고    scopus 로고
    • The ways of action of long non-coding RNAs in cytoplasm and nucleus
    • Zhang, K., Shi, Z. M., Chang, Y. N., Hu, Z. M., Qi, H. X. and Hong, W. The ways of action of long non-coding RNAs in cytoplasm and nucleus. Gene 547 (2014) 1-9. DOI: 10.1016/j.gene.2014.06.043.
    • (2014) Gene , vol.547 , pp. 1-9
    • Zhang, K.1    Shi, Z.M.2    Chang, Y.N.3    Hu, Z.M.4    Qi, H.X.5    Hong, W.6
  • 3
    • 84883644241 scopus 로고    scopus 로고
    • Noncoding RNA in oncogenesis: A new era of identifying key players
    • Deng, G. and Sui, G. Noncoding RNA in oncogenesis: a new era of identifying key players. Int. J. Mol. Sci. 14 (2013) 18319-18349. DOI: 10.3390/ijms140918319.
    • (2013) Int. J. Mol. Sci , vol.14 , pp. 18319-18349
    • Deng, G.1    Sui, G.2
  • 4
    • 0025961771 scopus 로고
    • A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome
    • Brown, C. J., Ballabio, A., Rupert, J. L., Lafreniere, R. G., Grompe, M., Tonlorenzi, R. and Willard, H. F. A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome. Nature 349 (1991) 38-44. DOI: 10.1038/349038a0.
    • (1991) Nature , vol.349 , pp. 38-44
    • Brown, C.J.1    Ballabio, A.2    Rupert, J.L.3    Lafreniere, R.G.4    Grompe, M.5    Tonlorenzi, R.6    Willard, H.F.7
  • 5
    • 84869144550 scopus 로고    scopus 로고
    • Strategies to identify long noncoding RNAs involved in gene regulation
    • Lee, C. and Kikyo, N. Strategies to identify long noncoding RNAs involved in gene regulation. Cell Biosci. 2 (2012) 37. DOI: 10.1186/2045-3701-2-37.
    • (2012) Cell Biosci , vol.2 , pp. 37
    • Lee, C.1    Kikyo, N.2
  • 6
    • 0142104045 scopus 로고    scopus 로고
    • Analysis of the mouse transcriptome based on functional annotation of 60, 770 full-length cDNAs
    • Okazaki, Y., Furuno, M., Kasukawa, T., Adachi, J., Bono, H., Kondo, S., Nikaido, I., Osato, N., Saito, R., Suzuki, H., Yamanaka, I., Kiyosawa, H., Yagi, K., Tomaru, Y., Hasegawa, Y., Nogami, A., Schonbach, C., Gojobori, T., Baldarelli, R., Hill, D. P., Bult, C., Hume, D. A., Quackenbush, J., Schriml, L. M., Kanapin, A., Matsuda, H., Batalov, S., Beisel, K. W., Blake, J. A., Bradt, D., Brusic, V., Chothia, C., Corbani, L. E., Cousins, S., Dalla, E., Dragani, T. A., Fletcher, C. F., Forrest, A., Frazer, K. S., Gaasterland, T., Gariboldi, M., Gissi, C., Godzik, A., Gough, J., Grimmond, S., Gustincich, S., Hirokawa, N., Jackson, I. J., Jarvis, E. D., Kanai, A., Kawaji, H., Kawasawa, Y., Kedzierski, R. M., King, B. L., Konagaya, A., Kurochkin, I. V., Lee, Y., Lenhard, B., Lyons, P. A., Maglott, D. R., Maltais, L., Marchionni, L., McKenzie, L., Miki, H., Nagashima, T., Numata, K., Okido, T., Pavan, W. J., Pertea, G., Pesole, G., Petrovsky, N., Pillai, R., Pontius, J. U., Qi, D., Ramachandran, S., Ravasi, T., Reed, J. C., Reed, D. J., Reid, J., Ring, B. Z., Ringwald, M., Sandelin, A., Schneider, C., Semple, C. A., Setou, M., Shimada, K., Sultana, R., Takenaka, Y., Taylor, M. S., Teasdale, R. D., Tomita, M., Verardo, R., Wagner, L., Wahlestedt, C., Wang, Y., Watanabe, Y., Wells, C., Wilming, L. G., Wynshaw-Boris, A., Yanagisawa, M., Yang, I., Yang, L., Yuan, Z., Zavolan, M., Zhu, Y., Zimmer, A., Carninci, P., Hayatsu, N., Hirozane-Kishikawa, T., Konno, H., Nakamura, M., Sakazume, N., Sato, K., Shiraki, T., Waki, K., Kawai, J., Aizawa, K., Arakawa, T., Fukuda, S., Hara, A., Hashizume, W., Imotani, K., Ishii, Y., Itoh, M., Kagawa, I., Miyazaki, A., Sakai, K., Sasaki, D., Shibata, K., Shinagawa, A., Yasunishi, A., Yoshino, M., Waterston, R., Lander, E. S., Rogers, J., Birney, E. and Hayashizaki, Y. Analysis of the mouse transcriptome based on functional annotation of 60, 770 full-length cDNAs. Nature 420 (2002) 563-573. DOI: 10.1038/nature01266.
    • (2002) Nature , vol.420 , pp. 563-573
    • Okazaki, Y.1    Furuno, M.2    Kasukawa, T.3    Adachi, J.4    Bono, H.5    Kondo, S.6    Nikaido, I.7    Osato, N.8    Saito, R.9    Suzuki, H.10    Yamanaka, I.11
  • 7
    • 56949091456 scopus 로고    scopus 로고
    • Noncoding RNA in development
    • Amaral, P. P. and Mattick, J. S. Noncoding RNA in development. Mamm. Genome 19 (2008) 454-492. DOI: 10.1007/s00335-008-9136-7.
    • (2008) Mamm. Genome , vol.19 , pp. 454-492
    • Amaral, P.P.1    Mattick, J.S.2
  • 8
    • 84872501669 scopus 로고    scopus 로고
    • Non-coding RNAs in Alzheimer's disease
    • Tan, L., Yu, J. T., Hu, N. and Tan, L. Non-coding RNAs in Alzheimer's disease. Mol. Neurobiol. 47 (2013) 382-393. DOI: 10.1007/s12035-012-8359-5.
    • (2013) Mol. Neurobiol , vol.47 , pp. 382-393
    • Tan, L.1    Yu, J.T.2    Hu, N.3    Tan, L.4
  • 9
    • 84910147922 scopus 로고    scopus 로고
    • Long noncoding RNAs in patients with acute myocardial infarction
    • Vausort, M., Wagner, D. R. and Devaux, Y. Long noncoding RNAs in patients with acute myocardial infarction. Circ. Res. 115 (2014) 668-677. DOI: 10.1161/CIRCRESAHA.115. 303836.
    • (2014) Circ. Res , vol.115 , pp. 668-677
    • Vausort, M.1    Wagner, D.R.2    Devaux, Y.3
  • 10
    • 84927610522 scopus 로고    scopus 로고
    • Comprehensive characterization of cancer subtype associated long non-coding RNAs and their clinical implications
    • Zhao, W., Luo, J. and Jiao, S. Comprehensive characterization of cancer subtype associated long non-coding RNAs and their clinical implications. Sci. Rep. 4 (2014) 6591. DOI: 10.1038/srep06591.
    • (2014) Sci. Rep , vol.4 , pp. 6591
    • Zhao, W.1    Luo, J.2    Jiao, S.3
  • 12
    • 84904748043 scopus 로고    scopus 로고
    • Analysing the relationship between lncRNA and protein-coding gene and the role of lncRNA as ceRNA in pulmonary fibrosis
    • Song, X., Cao, G., Jing, L., Lin, S., Wang, X., Zhang, J., Wang, M., Liu, W. and Lv, C. Analysing the relationship between lncRNA and protein-coding gene and the role of lncRNA as ceRNA in pulmonary fibrosis. J. Cell Mol. Med. 18 (2014) 991-1003. DOI: 10.1111/jcmm.12243.
    • (2014) J. Cell Mol. Med , vol.18 , pp. 991-1003
    • Song, X.1    Cao, G.2    Jing, L.3    Lin, S.4    Wang, X.5    Zhang, J.6    Wang, M.7    Liu, W.8    Lv, C.9
  • 14
    • 84876367541 scopus 로고    scopus 로고
    • Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal
    • Wang, Y., Xu, Z., Jiang, J., Xu, C., Kang, J., Xiao, L., Wu, M., Xiong, J., Guo, X. and Liu, H. Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal. Dev. Cell 25 (2013) 69-80. DOI: 10.1016/j.devcel. 2013.03.002.
    • (2013) Dev. Cell , vol.25 , pp. 69-80
    • Wang, Y.1    Xu, Z.2    Jiang, J.3    Xu, C.4    Kang, J.5    Xiao, L.6    Wu, M.7    Xiong, J.8    Guo, X.9    Liu, H.10
  • 15
    • 60149099385 scopus 로고    scopus 로고
    • Evolution and functions of long noncoding RNAs
    • Ponting, C. P., Oliver, P. L. and Reik, W. Evolution and functions of long noncoding RNAs. Cell 136 (2009) 629-641. DOI: 10.1016/j.cell.2009.02.006.
    • (2009) Cell , vol.136 , pp. 629-641
    • Ponting, C.P.1    Oliver, P.L.2    Reik, W.3
  • 16
    • 84884953564 scopus 로고    scopus 로고
    • Function of lncRNAs and approaches to lncRNA-protein interactions
    • Zhu, J., Fu, H., Wu, Y. and Zheng, X. Function of lncRNAs and approaches to lncRNA-protein interactions. Sci. China Life Sci. 56 (2013) 876-885. DOI: 10.1007/s11427-013-4553-6.
    • (2013) Sci. China Life Sci , vol.56 , pp. 876-885
    • Zhu, J.1    Fu, H.2    Wu, Y.3    Zheng, X.4
  • 18
    • 78650861843 scopus 로고    scopus 로고
    • The prevalence and regulation of antisense transcripts in Schizosaccharomyces pombe
    • Ni, T., Tu, K., Wang, Z., Song, S., Wu, H., Xie, B., Scott, K. C., Grewal, S. I., Gao, Y. and Zhu, J. The prevalence and regulation of antisense transcripts in Schizosaccharomyces pombe. PLoS One 5 (2010) e15271. DOI: 10.1371/journal.pone.0015271.
    • (2010) PLoS One , vol.5 , pp. e15271
    • Ni, T.1    Tu, K.2    Wang, Z.3    Song, S.4    Wu, H.5    Xie, B.6    Scott, K.C.7    Grewal, S.I.8    Gao, Y.9    Zhu, J.10
  • 20
  • 22
    • 84858797790 scopus 로고    scopus 로고
    • Exploring long non-coding RNAs through sequencing
    • Atkinson, S. R., Marguerat, S. and Bahler, J. Exploring long non-coding RNAs through sequencing. Semin. Cell Dev. Biol. 23 (2012) 200-205. DOI: 10.1016/j.semcdb.2011.12.003.
    • (2012) Semin. Cell Dev. Biol , vol.23 , pp. 200-205
    • Atkinson, S.R.1    Marguerat, S.2    Bahler, J.3
  • 23
    • 84895877010 scopus 로고    scopus 로고
    • Emerging epigenetic mechanisms of long non-coding RNAs
    • Schaukowitch, K. and Kim, T. K. Emerging epigenetic mechanisms of long non-coding RNAs. Neuroscience 264 (2014) 25-38. DOI: 10.1016/j.neuroscience.2013.12.009.
    • (2014) Neuroscience , vol.264 , pp. 25-38
    • Schaukowitch, K.1    Kim, T.K.2
  • 25
    • 77951891107 scopus 로고    scopus 로고
    • Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved elements
    • Licastro, D., Gennarino, V. A., Petrera, F., Sanges, R., Banfi, S. and Stupka, E. Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved elements. BMC Genomics 11 (2010) 151. DOI: 10.1186/1471-2164-11-151.
    • (2010) BMC Genomics , vol.11 , pp. 151
    • Licastro, D.1    Gennarino, V.A.2    Petrera, F.3    Sanges, R.4    Banfi, S.5    Stupka, E.6
  • 26
    • 60349120914 scopus 로고    scopus 로고
    • Long non-coding RNAs: Insights into functions
    • Mercer, T. R., Dinger, M. E. and Mattick, J. S. Long non-coding RNAs: insights into functions. Nat. Rev. Genet. 10 (2009) 155-159. DOI: 10.1038/nrg2521.
    • (2009) Nat. Rev. Genet , vol.10 , pp. 155-159
    • Mercer, T.R.1    Dinger, M.E.2    Mattick, J.S.3
  • 29
    • 80053045739 scopus 로고    scopus 로고
    • Molecular mechanisms of long noncoding RNAs
    • Wang, K. C. and Chang, H. Y. Molecular mechanisms of long noncoding RNAs. Mol. Cell 43 (2011) 904-914. DOI: 10.1016/j.molcel.2011.08.018.
    • (2011) Mol. Cell , vol.43 , pp. 904-914
    • Wang, K.C.1    Chang, H.Y.2
  • 31
    • 70149123708 scopus 로고    scopus 로고
    • Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain
    • Ponjavic, J., Oliver, P. L., Lunter, G. and Ponting, C. P. Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain. PLoS Genet. 5 (2009) e1000617. DOI: 10.1371/journal.pgen. 1000617.
    • (2009) PLoS Genet , vol.5 , pp. e1000617
    • Ponjavic, J.1    Oliver, P.L.2    Lunter, G.3    Ponting, C.P.4
  • 35
    • 84867576900 scopus 로고    scopus 로고
    • Genome-wide identification and initial characterization of bovine long non-coding RNAs from EST data
    • Huang, W., Long, N. and Khatib, H. Genome-wide identification and initial characterization of bovine long non-coding RNAs from EST data. Anim. Genet. 43 (2012) 674-682. DOI: 10.1111/j.1365-2052.2012.02325.x.
    • (2012) Anim. Genet , vol.43 , pp. 674-682
    • Huang, W.1    Long, N.2    Khatib, H.3
  • 37
    • 84911491114 scopus 로고    scopus 로고
    • Circular RNAs: Diversity of form and function
    • Lasda, E. and Parker, R. Circular RNAs: diversity of form and function. RNA 20 (2014) 1829-1842. DOI: 10.1261/rna.047126.114.
    • (2014) RNA , vol.20 , pp. 1829-1842
    • Lasda, E.1    Parker, R.2
  • 38
    • 78149403591 scopus 로고    scopus 로고
    • MacroRNA underdogs in a microRNA world: Evolutionary, regulatory, and biomedical significance of mammalian long non-protein-coding RNA
    • Lipovich, L., Johnson, R. and Lin, C. Y. MacroRNA underdogs in a microRNA world: evolutionary, regulatory, and biomedical significance of mammalian long non-protein-coding RNA. Biochim. Biophys. Acta 1799 (2010) 597-615. DOI: 10.1016/j.bbagrm.2010.10.001.
    • (2010) Biochim. Biophys. Acta , vol.1799 , pp. 597-615
    • Lipovich, L.1    Johnson, R.2    Lin, C.Y.3
  • 39
    • 84857066786 scopus 로고    scopus 로고
    • Modular regulatory principles of large noncoding RNAs
    • Guttman, M. and Rinn, J. L. Modular regulatory principles of large noncoding RNAs. Nature 482 (2012) 339-346. DOI: 10.1038/nature10887.
    • (2012) Nature , vol.482 , pp. 339-346
    • Guttman, M.1    Rinn, J.L.2
  • 40
    • 77956607961 scopus 로고    scopus 로고
    • The matrix protein hnRNP U is required for chromosomal localization of Xist RNA
    • Hasegawa, Y., Brockdorff, N., Kawano, S., Tsutui, K., Tsutui, K. and Nakagawa, S. The matrix protein hnRNP U is required for chromosomal localization of Xist RNA. Dev. Cell 19 (2010) 469-476. DOI: 10.1016/j.devcel.2010.08.006.
    • (2010) Dev. Cell , vol.19 , pp. 469-476
    • Hasegawa, Y.1    Brockdorff, N.2    Kawano, S.3    Tsutui, K.4    Tsutui, K.5    Nakagawa, S.6
  • 41
    • 84889608134 scopus 로고    scopus 로고
    • Tackling structures of long noncoding RNAs
    • Novikova, I. V., Hennelly, S. P. and Sanbonmatsu, K. Y. Tackling structures of long noncoding RNAs. Int. J. Mol. Sci. 14 (2013) 23672-23684. DOI: 10.3390/ijms141223672.
    • (2013) Int. J. Mol. Sci , vol.14 , pp. 23672-23684
    • Novikova, I.V.1    Hennelly, S.P.2    Sanbonmatsu, K.Y.3
  • 44
    • 84883816842 scopus 로고    scopus 로고
    • Guided by RNAs: X-inactivation as a model for lncRNA function
    • Froberg, J. E., Yang, L. and Lee, J. T. Guided by RNAs: X-inactivation as a model for lncRNA function. J. Mol. Biol. 425 (2013) 3698-3706. DOI: 10.1016/j.jmb.2013.06.031.
    • (2013) J. Mol. Biol , vol.425 , pp. 3698-3706
    • Froberg, J.E.1    Yang, L.2    Lee, J.T.3
  • 45
    • 84868702894 scopus 로고    scopus 로고
    • Expression of KCNQ1OT1, CDKN1C, H19, and PLAGL1 and the methylation patterns at the KvDMR1 and H19/IGF2 imprinting control regions is conserved between human and bovine
    • Robbins, K. M., Chen, Z., Wells, K. D. and Rivera, R. M. Expression of KCNQ1OT1, CDKN1C, H19, and PLAGL1 and the methylation patterns at the KvDMR1 and H19/IGF2 imprinting control regions is conserved between human and bovine. J. Biomed. Sci. 19 (2012) 95. DOI: 10.1186/1423-0127-19-95.
    • (2012) J. Biomed. Sci , vol.19 , pp. 95
    • Robbins, K.M.1    Chen, Z.2    Wells, K.D.3    Rivera, R.M.4
  • 46
    • 33846930357 scopus 로고    scopus 로고
    • Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript
    • Martianov, I., Ramadass, A., Serra Barros, A., Chow, N. and Akoulitchev, A. Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript. Nature 445 (2007) 666-670. DOI: 10.1038/nature05519.
    • (2007) Nature , vol.445 , pp. 666-670
    • Martianov, I.1    Ramadass, A.2    Serra Barros, A.3    Chow, N.4    Akoulitchev, A.5
  • 47
    • 0036765863 scopus 로고    scopus 로고
    • Triplex-forming DNAs in the human interphase nucleus visualized in situ by polypurine/polypyrimidine DNA probes and antitriplex antibodies
    • Ohno, M., Fukagawa, T., Lee, J. S. and Ikemura, T. Triplex-forming DNAs in the human interphase nucleus visualized in situ by polypurine/polypyrimidine DNA probes and antitriplex antibodies. Chromosoma 111 (2002) 201-213. DOI: 10.1007/s00412-002-0198-0.
    • (2002) Chromosoma , vol.111 , pp. 201-213
    • Ohno, M.1    Fukagawa, T.2    Lee, J.S.3    Ikemura, T.4
  • 48
    • 77951638287 scopus 로고    scopus 로고
    • Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor
    • Kino, T., Hurt, D. E., Ichijo, T., Nader, N. and Chrousos, G. P. Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor. Sci. Signal. 3 (2010) ra8. DOI: 10.1126/scisignal.2000568.
    • (2010) Sci. Signal , vol.3 , pp. ra8
    • Kino, T.1    Hurt, D.E.2    Ichijo, T.3    Nader, N.4    Chrousos, G.P.5
  • 49
    • 39549103642 scopus 로고    scopus 로고
    • Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock
    • Mariner, P. D., Walters, R. D., Espinoza, C. A., Drullinger, L. F., Wagner, S. D., Kugel, J. F. and Goodrich, J. A. Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock. Mol. Cell 29 (2008) 499-509. DOI: 10.1016/j.molcel.2007.12.013.
    • (2008) Mol. Cell , vol.29 , pp. 499-509
    • Mariner, P.D.1    Walters, R.D.2    Espinoza, C.A.3    Drullinger, L.F.4    Wagner, S.D.5    Kugel, J.F.6    Goodrich, J.A.7
  • 50
    • 84884608815 scopus 로고    scopus 로고
    • Ets-1 facilitates nuclear entry of NFAT proteins and their recruitment to the IL-2 promoter
    • Tsao, H. W., Tai, T. S., Tseng, W., Chang, H. H., Grenningloh, R., Miaw, S. C. and Ho, I. C. Ets-1 facilitates nuclear entry of NFAT proteins and their recruitment to the IL-2 promoter. Proc. Natl. Acad. Sci. USA 110 (2013) 15776-15781. DOI: 10.1073/pnas.1304343110.
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 15776-15781
    • Tsao, H.W.1    Tai, T.S.2    Tseng, W.3    Chang, H.H.4    Grenningloh, R.5    Miaw, S.C.6    Ho, I.C.7
  • 51
    • 33646159513 scopus 로고    scopus 로고
    • Silencing the transcriptome's dark matter: Mechanisms for suppressing translation of intergenic transcripts
    • Bickel, K. S. and Morris, D. R. Silencing the transcriptome's dark matter: mechanisms for suppressing translation of intergenic transcripts. Mol. Cell 22 (2006) 309-316. DOI: 10.1016/j.molcel.2006.04.010.
    • (2006) Mol. Cell , vol.22 , pp. 309-316
    • Bickel, K.S.1    Morris, D.R.2
  • 52
    • 55549098872 scopus 로고    scopus 로고
    • Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs
    • Hirota, K., Miyoshi, T., Kugou, K., Hoffman, C. S., Shibata, T. and Ohta, K. Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs. Nature 456 (2008) 130-134. DOI: 10.1038/nature07348.
    • (2008) Nature , vol.456 , pp. 130-134
    • Hirota, K.1    Miyoshi, T.2    Kugou, K.3    Hoffman, C.S.4    Shibata, T.5    Ohta, K.6
  • 53
    • 27744533201 scopus 로고    scopus 로고
    • Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae
    • Martens, J. A., Wu, P. Y. and Winston, F. Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae. Genes Dev. 19 (2005) 2695-2704. DOI: 10.1101/gad.1367605.
    • (2005) Genes Dev , vol.19 , pp. 2695-2704
    • Martens, J.A.1    Wu, P.Y.2    Winston, F.3
  • 54
    • 20444490380 scopus 로고    scopus 로고
    • Identification and characterization of a novel gene Saf transcribed from the opposite strand of Fas
    • Yan, M. D., Hong, C. C., Lai, G. M., Cheng, A. L., Lin, Y. W. and Chuang, S. E. Identification and characterization of a novel gene Saf transcribed from the opposite strand of Fas. Hum. Mol. Genet. 14 (2005) 1465-1474. DOI: 10.1093/hmg/ddi156.
    • (2005) Hum. Mol. Genet , vol.14 , pp. 1465-1474
    • Yan, M.D.1    Hong, C.C.2    Lai, G.M.3    Cheng, A.L.4    Lin, Y.W.5    Chuang, S.E.6
  • 56
    • 84864739324 scopus 로고    scopus 로고
    • Integrative transcriptome analysis suggest processing of a subset of long non-coding RNAs to small RNAs
    • Jalali, S., Jayaraj, G. G. and Scaria, V. Integrative transcriptome analysis suggest processing of a subset of long non-coding RNAs to small RNAs. Biol. Direct 7 (2012) 25. DOI: 10.1186/1745-6150-7-25.
    • (2012) Biol. Direct , vol.7 , pp. 25
    • Jalali, S.1    Jayaraj, G.G.2    Scaria, V.3
  • 58
    • 45549098196 scopus 로고    scopus 로고
    • Intersection of the RNA interference and X-inactivation pathways
    • Ogawa, Y., Sun, B. K. and Lee, J. T. Intersection of the RNA interference and X-inactivation pathways. Science 320 (2008) 1336-1341. DOI: 10.1126/science.1157676.
    • (2008) Science , vol.320 , pp. 1336-1341
    • Ogawa, Y.1    Sun, B.K.2    Lee, J.T.3
  • 61
    • 80054715378 scopus 로고    scopus 로고
    • A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA
    • Cesana, M., Cacchiarelli, D., Legnini, I., Santini, T., Sthandier, O., Chinappi, M., Tramontano, A. and Bozzoni, I. A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA. Cell 147 (2011) 358-369. DOI: 10.1016/j.cell.2011.09.028.
    • (2011) Cell , vol.147 , pp. 358-369
    • Cesana, M.1    Cacchiarelli, D.2    Legnini, I.3    Santini, T.4    Sthandier, O.5    Chinappi, M.6    Tramontano, A.7    Bozzoni, I.8
  • 63
    • 79951495822 scopus 로고    scopus 로고
    • LncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements
    • Gong, C. and Maquat, L. E. LncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements. Nature 470 (2011) 284-288. DOI: 10.1038/nature09701.
    • (2011) Nature , vol.470 , pp. 284-288
    • Gong, C.1    Maquat, L.E.2
  • 65
    • 84905449570 scopus 로고    scopus 로고
    • Attenuated ability of BACE1 to cleave the amyloid precursor protein via silencing long noncoding RNA BACE1AS expression
    • Liu, T., Huang, Y., Chen, J., Chi, H., Yu, Z., Wang, J. and Chen, C. Attenuated ability of BACE1 to cleave the amyloid precursor protein via silencing long noncoding RNA BACE1AS expression. Mol. Med. Rep. 10 (2014) 1275-1281. DOI: 10.3892/mmr.2014.2351.
    • (2014) Mol. Med. Rep , vol.10 , pp. 1275-1281
    • Liu, T.1    Huang, Y.2    Chen, J.3    Chi, H.4    Yu, Z.5    Wang, J.6    Chen, C.7
  • 67
    • 84908650869 scopus 로고    scopus 로고
    • The long non-coding RNA GAS5 cooperates with the eukaryotic translation initiation factor 4E to regulate c-Myc translation
    • Hu, G., Lou, Z. and Gupta, M. The long non-coding RNA GAS5 cooperates with the eukaryotic translation initiation factor 4E to regulate c-Myc translation. PLoS One 9 (2014) e107016. DOI: 10.1371/journal.pone.0107016.
    • (2014) PLoS One , vol.9 , pp. e107016
    • Hu, G.1    Lou, Z.2    Gupta, M.3
  • 69
    • 84899486799 scopus 로고    scopus 로고
    • The STAT3-binding long noncoding RNA lnc-DC controls human dendritic cell differentiation
    • Wang, P., Xue, Y., Han, Y., Lin, L., Wu, C., Xu, S., Jiang, Z., Xu, J., Liu, Q. and Cao, X. The STAT3-binding long noncoding RNA lnc-DC controls human dendritic cell differentiation. Science 344 (2014) 310-313. DOI: 10.1126/science.1251456.
    • (2014) Science , vol.344 , pp. 310-313
    • Wang, P.1    Xue, Y.2    Han, Y.3    Lin, L.4    Wu, C.5    Xu, S.6    Jiang, Z.7    Xu, J.8    Liu, Q.9    Cao, X.10
  • 70
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead, B. and Salzberg, S. L. Fast gapped-read alignment with Bowtie 2. Nat. Methods 9 (2012) 357-359. DOI: 10.1038/nmeth.1923.
    • (2012) Nat. Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 71
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li, H. and Durbin, R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25 (2009) 1754-1760. DOI: 10.1093/bioinformatics/btp324.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 72
    • 77952123055 scopus 로고    scopus 로고
    • Transcript assembly and quantification by RNA sequencing reveals unannotated transcripts and isoform switching during cell differentiation
    • Trapnell, C., Williams, B. A., Pertea, G., Mortazavi, A., Kwan, G., van Baren, M. J., Salzberg, S. L., Wold, B. J. and Pachter, L. Transcript assembly and quantification by RNA sequencing reveals unannotated transcripts and isoform switching during cell differentiation. Nat. Biotechnol. 28 (2010) 511-515. DOI: 10.1038/nbt.1621.
    • (2010) Nat. Biotechnol , vol.28 , pp. 511-515
    • Trapnell, C.1    Williams, B.A.2    Pertea, G.3    Mortazavi, A.4    Kwan, G.5    Van Baren, M.J.6    Salzberg, S.L.7    Wold, B.J.8    Pachter, L.9
  • 79
    • 84862961273 scopus 로고    scopus 로고
    • Identification of novel long noncoding RNA transcripts in male germ cells
    • Lee, T. L., Xiao, A. and Rennert, O. M. Identification of novel long noncoding RNA transcripts in male germ cells. Methods Mol. Biol. 825 (2012) 105-114. DOI: 10.1007/978-1-61779-436-0-9.
    • (2012) Methods Mol. Biol , vol.825 , pp. 105-114
    • Lee, T.L.1    Xiao, A.2    Rennert, O.M.3
  • 82
    • 84902658158 scopus 로고    scopus 로고
    • Identification of candidate long non-coding RNAs in response to myocardial infarction
    • Zangrando, J., Zhang, L., Vausort, M., Maskali, F., Marie, P. Y., Wagner, D. R. and Devaux, Y. Identification of candidate long non-coding RNAs in response to myocardial infarction. BMC Genomics 15 (2014) 460. DOI: 10.1186/1471-2164-15-460.
    • (2014) BMC Genomics , vol.15 , pp. 460
    • Zangrando, J.1    Zhang, L.2    Vausort, M.3    Maskali, F.4    Marie, P.Y.5    Wagner, D.R.6    Devaux, Y.7
  • 83
    • 80052978224 scopus 로고    scopus 로고
    • Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
    • Cabili, M. N., Trapnell, C., Goff, L., Koziol, M., Tazon-Vega, B., Regev, A. and Rinn, J. L. Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses. Genes Dev. 25 (2011) 1915-1927. DOI: 10.1101/gad.17446611.
    • (2011) Genes Dev , vol.25 , pp. 1915-1927
    • Cabili, M.N.1    Trapnell, C.2    Goff, L.3    Koziol, M.4    Tazon-Vega, B.5    Regev, A.6    Rinn, J.L.7
  • 84
    • 79959446962 scopus 로고    scopus 로고
    • PhyloCSF: A comparative genomics method to distinguish protein coding and non-coding regions
    • Lin, M. F., Jungreis, I. and Kellis, M. PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions. Bioinformatics 27 (2011) i275-282. DOI: 10.1093/bioinformatics/btr209.
    • (2011) Bioinformatics , vol.27 , pp. i275-i282
    • Lin, M.F.1    Jungreis, I.2    Kellis, M.3
  • 85
    • 84880720364 scopus 로고    scopus 로고
    • Detecting and comparing noncoding RNAs in the high-throughput era
    • Bussotti, G., Notredame, C. and Enright, A. J. Detecting and comparing noncoding RNAs in the high-throughput era. Int. J. Mol. Sci. 14 (2013) 15423-15458. DOI: 10.3390/ijms1408 15423.
    • (2013) Int. J. Mol. Sci , vol.14 , pp. 15423-15458
    • Bussotti, G.1    Notredame, C.2    Enright, A.J.3
  • 86
    • 34547582418 scopus 로고    scopus 로고
    • CPC: Assess the protein-coding potential of transcripts using sequence features and support vector machine
    • Kong, L., Zhang, Y., Ye, Z. Q., Liu, X. Q., Zhao, S. Q., Wei, L. and Gao, G. CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine. Nucleic Acids Res. 35 (2007) W345-349. DOI: 10.1093/nar/gkm391.
    • (2007) Nucleic Acids Res , vol.35 , pp. W345-W349
    • Kong, L.1    Zhang, Y.2    Ye, Z.Q.3    Liu, X.Q.4    Zhao, S.Q.5    Wei, L.6    Gao, G.7
  • 87
    • 69349102207 scopus 로고    scopus 로고
    • Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: Case study of the pathogenic fungus Paracoccidioides brasiliensis
    • Arrial, R. T., Togawa, R. C. and Brigido Mde, M. Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: case study of the pathogenic fungus Paracoccidioides brasiliensis. BMC Bioinformatics 10 (2009) 239. DOI: 10.1186/1471-21 05-10-239.
    • (2009) BMC Bioinformatics , vol.10 , pp. 239
    • Arrial, R.T.1    Togawa, R.C.2    Brigido Mde, M.3
  • 88
    • 84876020023 scopus 로고    scopus 로고
    • CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
    • Wang, L., Park, H. J., Dasari, S., Wang, S., Kocher, J. P. and Li, W. CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model. Nucleic Acids Res. 41 (2013) e74. DOI: 10.1093/nar/gkt006.
    • (2013) Nucleic Acids Res , vol.41 , pp. e74
    • Wang, L.1    Park, H.J.2    Dasari, S.3    Wang, S.4    Kocher, J.P.5    Li, W.6
  • 89
    • 84907228220 scopus 로고    scopus 로고
    • Simultaneous detection and identification of bacteria and fungi in cerebrospinal fluid by TaqMan probe-based real-time PCR
    • Han, H., Hu, Z., Sun, S., Yao, F., Yan, X., Zhang, X. and Wu, B. Simultaneous detection and identification of bacteria and fungi in cerebrospinal fluid by TaqMan probe-based real-time PCR. Clin. Lab. 60 (2014) 1287-1293.
    • (2014) Clin. Lab , vol.60 , pp. 1287-1293
    • Han, H.1    Hu, Z.2    Sun, S.3    Yao, F.4    Yan, X.5    Zhang, X.6    Wu, B.7
  • 90
    • 84907202575 scopus 로고    scopus 로고
    • Using aminolabeled nucleotide probes for simultaneous single molecule RNA-DNA FISH
    • Basu, R., Lai, L. T., Meng, Z., Wu, J., Shao, F. and Zhang, L. F. Using aminolabeled nucleotide probes for simultaneous single molecule RNA-DNA FISH. PLoS One 9 (2014) e107425. DOI: 10.1371/journal.pone.0107425.
    • (2014) PLoS One , vol.9 , pp. e107425
    • Basu, R.1    Lai, L.T.2    Meng, Z.3    Wu, J.4    Shao, F.5    Zhang, L.F.6
  • 91
    • 84919380786 scopus 로고    scopus 로고
    • Dominance of chemokine ligand 2 and matrix metalloproteinase-2 and -9 and suppression of pro-inflammatory cytokines in the epidural compartment after intervertebral disc extrusion in a canine model
    • Karli, P., Martle, V., Bossens, K., Summerfield, A., Doherr, M. G., Turner, P., Vandevelde, M., Forterre, F. and Henke, D. Dominance of chemokine ligand 2 and matrix metalloproteinase-2 and -9 and suppression of pro-inflammatory cytokines in the epidural compartment after intervertebral disc extrusion in a canine model. Spine J. (2014). DOI: 10.1016/j.spinee. 2014.05.021.
    • (2014) Spine J
    • Karli, P.1    Martle, V.2    Bossens, K.3    Summerfield, A.4    Doherr, M.G.5    Turner, P.6    Vandevelde, M.7    Forterre, F.8    Henke, D.9
  • 92
    • 84907364269 scopus 로고    scopus 로고
    • Elucidating gene function and function evolution through comparison of coexpression networks of plants
    • Hansen, B. O., Vaid, N., Musialak-Lange, M., Janowski, M. and Mutwil, M. Elucidating gene function and function evolution through comparison of coexpression networks of plants. Front. Plant Sci. 5 (2014) 394. DOI: 10.3389/fpls.2014.00394.
    • (2014) Front. Plant Sci , vol.5 , pp. 394
    • Hansen, B.O.1    Vaid, N.2    Musialak-Lange, M.3    Janowski, M.4    Mutwil, M.5
  • 93
    • 33747857387 scopus 로고    scopus 로고
    • RNAMST: Efficient and flexible approach for identifying RNA structural homologs
    • Chang, T. H., Huang, H. D., Chuang, T. N., Shien, D. M. and Horng, J. T. RNAMST: efficient and flexible approach for identifying RNA structural homologs. Nucleic Acids Res. 34 (2006) W423-428. DOI: 10.1093/nar/gkl231.
    • (2006) Nucleic Acids Res , vol.34 , pp. W423-W428
    • Chang, T.H.1    Huang, H.D.2    Chuang, T.N.3    Shien, D.M.4    Horng, J.T.5
  • 94
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn, J. L. and Chang, H. Y. Genome regulation by long noncoding RNAs. Annu. Rev. Biochem. 81 (2012) 145-166. DOI: 10.1146/annurev-biochem-051410-092902.
    • (2012) Annu. Rev. Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 95
    • 84865138690 scopus 로고    scopus 로고
    • Mircode: A map of putative microRNA target sites in the long non-coding transcriptome
    • Jeggari, A., Marks, D. S. and Larsson, E. miRcode: a map of putative microRNA target sites in the long non-coding transcriptome. Bioinformatics 28 (2012) 2062-2063. DOI: 10.1093/bioinformatics/bts344.
    • (2012) Bioinformatics , vol.28 , pp. 2062-2063
    • Jeggari, A.1    Marks, D.S.2    Larsson, E.3
  • 96
    • 84891818924 scopus 로고    scopus 로고
    • Starbase v2.0: Decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data
    • Li, J. H., Liu, S., Zhou, H., Qu, L. H. and Yang, J. H. starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data. Nucleic Acids Res. 42 (2014) D92-97. DOI: 10.1093/nar/gkt1248.
    • (2014) Nucleic Acids Res , vol.42 , pp. D92-D97
    • Li, J.H.1    Liu, S.2    Zhou, H.3    Qu, L.H.4    Yang, J.H.5
  • 98
    • 84907212706 scopus 로고    scopus 로고
    • LncRBase: An enriched resource for lncRNA information
    • Chakraborty, S., Deb, A., Maji, R. K., Saha, S. and Ghosh, Z. LncRBase: an enriched resource for lncRNA information. PLoS One 9 (2014) e108010. DOI: 10.1371/journal.pone.0108010.
    • (2014) PLoS One , vol.9 , pp. e108010
    • Chakraborty, S.1    Deb, A.2    Maji, R.K.3    Saha, S.4    Ghosh, Z.5
  • 99
    • 84890108824 scopus 로고    scopus 로고
    • Catrapid omics: A web server for large-scale prediction of protein-RNA interactions
    • Agostini, F., Zanzoni, A., Klus, P., Marchese, D., Cirillo, D. and Tartaglia, G. G. catRAPID omics: a web server for large-scale prediction of protein-RNA interactions. Bioinformatics 29 (2013) 2928-2930. DOI: 10.1093/bioinformatics/btt495.
    • (2013) Bioinformatics , vol.29 , pp. 2928-2930
    • Agostini, F.1    Zanzoni, A.2    Klus, P.3    Marchese, D.4    Cirillo, D.5    Tartaglia, G.G.6
  • 101
    • 84863741439 scopus 로고    scopus 로고
    • Chromatin isolation by RNA purification (ChIRP)
    • Chu, C., Quinn, J. and Chang, H. Y. Chromatin isolation by RNA purification (ChIRP). J. Vis. Exp. (2012). DOI: 10.3791/3912.
    • (2012) J. Vis. Exp
    • Chu, C.1    Quinn, J.2    Chang, H.Y.3
  • 102
    • 68349098404 scopus 로고    scopus 로고
    • RNA immunoprecipitation to determine RNA-protein associations in vivo
    • Selth, L. A., Gilbert, C. and Svejstrup, J. Q. RNA immunoprecipitation to determine RNA-protein associations in vivo. Cold Spring Harb. Protoc. 2009 (2009) pdb prot5234. DOI: 10.1101/pdb.prot5234.
    • (2009) Cold Spring Harb. Protoc , vol.2009 , pp. 5234
    • Selth, L.A.1    Gilbert, C.2    Svejstrup, J.Q.3
  • 104
    • 84885127971 scopus 로고    scopus 로고
    • 3S: Shotgun secondary structure determination of long non-coding RNAs
    • Novikova, I. V., Dharap, A., Hennelly, S. P. and Sanbonmatsu, K. Y. 3S: shotgun secondary structure determination of long non-coding RNAs. Methods 63 (2013) 170-177. DOI: 10.1016/j.ymeth.2013.07.030.
    • (2013) Methods , vol.63 , pp. 170-177
    • Novikova, I.V.1    Dharap, A.2    Hennelly, S.P.3    Sanbonmatsu, K.Y.4
  • 105
    • 84862195751 scopus 로고    scopus 로고
    • Structural architecture of the human long non-coding RNA, steroid receptor RNA activator
    • Novikova, I. V., Hennelly, S. P. and Sanbonmatsu, K. Y. Structural architecture of the human long non-coding RNA, steroid receptor RNA activator. Nucleic Acids Res. 40 (2012) 5034-5051. DOI: 10.1093/nar/gks071.
    • (2012) Nucleic Acids Res , vol.40 , pp. 5034-5051
    • Novikova, I.V.1    Hennelly, S.P.2    Sanbonmatsu, K.Y.3
  • 106
    • 84906322449 scopus 로고    scopus 로고
    • Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification
    • Quinn, J. J., Ilik, I. A., Qu, K., Georgiev, P., Chu, C., Akhtar, A. and Chang, H. Y. Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification. Nat. Biotechnol. 32 (2014) 933-940. DOI: 10.1038/nbt.2943.
    • (2014) Nat. Biotechnol , vol.32 , pp. 933-940
    • Quinn, J.J.1    Ilik, I.A.2    Qu, K.3    Georgiev, P.4    Chu, C.5    Akhtar, A.6    Chang, H.Y.7
  • 107
    • 77956306662 scopus 로고    scopus 로고
    • Genome-wide measurement of RNA secondary structure in yeast
    • Kertesz, M., Wan, Y., Mazor, E., Rinn, J. L., Nutter, R. C., Chang, H. Y. and Segal, E. Genome-wide measurement of RNA secondary structure in yeast. Nature 467 (2010) 103-107. DOI: 10.1038/nature09322.
    • (2010) Nature , vol.467 , pp. 103-107
    • Kertesz, M.1    Wan, Y.2    Mazor, E.3    Rinn, J.L.4    Nutter, R.C.5    Chang, H.Y.6    Segal, E.7
  • 110
    • 84873325566 scopus 로고    scopus 로고
    • SeqFold: Genome-scale reconstruction of RNA secondary structure integrating high-throughput sequencing data
    • Ouyang, Z., Snyder, M. P. and Chang, H. Y. SeqFold: genome-scale reconstruction of RNA secondary structure integrating high-throughput sequencing data. Genome Res. 23 (2013) 377-387. DOI: 10.1101/gr.138545.112.
    • (2013) Genome Res , vol.23 , pp. 377-387
    • Ouyang, Z.1    Snyder, M.P.2    Chang, H.Y.3
  • 111
    • 84872825450 scopus 로고    scopus 로고
    • Long non-coding RNA MALAT-1 overexpression predicts tumor recurrence of hepatocellular carcinoma after liver transplantation
    • Lai, M. C., Yang, Z., Zhou, L., Zhu, Q. Q., Xie, H. Y., Zhang, F., Wu, L. M., Chen, L. M. and Zheng, S. S. Long non-coding RNA MALAT-1 overexpression predicts tumor recurrence of hepatocellular carcinoma after liver transplantation. Med. Oncol. 29 (2012) 1810-1816. DOI: 10.1007/s12032-011-0004-z.
    • (2012) Med. Oncol , vol.29 , pp. 1810-1816
    • Lai, M.C.1    Yang, Z.2    Zhou, L.3    Zhu, Q.Q.4    Xie, H.Y.5    Zhang, F.6    Wu, L.M.7    Chen, L.M.8    Zheng, S.S.9
  • 112
    • 84901024004 scopus 로고    scopus 로고
    • Silencing of long noncoding RNA MALAT1 by miR-101 and miR-217 inhibits proliferation, migration and invasion of esophageal squamous cell carcinoma cells
    • Dec. 23.
    • Wang, X., Li, M., Wang, Z., Han, S., Tang, X., Ge, Y., Zhou, L., Zhou, C., Yuan, Q. and Yang, M. Silencing of long noncoding RNA MALAT1 by miR-101 and miR-217 inhibits proliferation, migration and invasion of esophageal squamous cell carcinoma cells. J. Biol. Chem. (2014) Dec. 23. pii: jbc.M114.596866. DOI: 10.1074/jbc. M114.596866.
    • (2014) J. Biol. Chem
    • Wang, X.1    Li, M.2    Wang, Z.3    Han, S.4    Tang, X.5    Ge, Y.6    Zhou, L.7    Zhou, C.8    Yuan, Q.9    Yang, M.10
  • 113
    • 84931416215 scopus 로고    scopus 로고
    • Upregulation of long non-coding RNA MALAT1 correlates with tumor progression and poor prognosis in clear cell renal cell carcinoma
    • Dec. 6
    • Zhang, H. M., Yang, F. Q., Chen, S. J., Che, J. and Zheng, J. H. Upregulation of long non-coding RNA MALAT1 correlates with tumor progression and poor prognosis in clear cell renal cell carcinoma. Tumour Biol. (2014) Dec. 6. DOI: 10.1007/s13277-014-2925-6.
    • (2014) Tumour Biol
    • Zhang, H.M.1    Yang, F.Q.2    Chen, S.J.3    Che, J.4    Zheng, J.H.5
  • 114
    • 84930900865 scopus 로고    scopus 로고
    • MALAT1 promotes the proliferation and metastasis of osteosarcoma cells by activating the PI3K/Akt pathway
    • Nov. 28
    • Dong, Y., Liang, G., Yuan, B., Yang, C., Gao, R. and Zhou, X. MALAT1 promotes the proliferation and metastasis of osteosarcoma cells by activating the PI3K/Akt pathway. Tumour Biol. (2014) Nov. 28. DOI: 10.1007/s13277-014-2631-4.
    • (2014) Tumour Biol
    • Dong, Y.1    Liang, G.2    Yuan, B.3    Yang, C.4    Gao, R.5    Zhou, X.6
  • 115
    • 84900856471 scopus 로고    scopus 로고
    • Expression and prognostic significance of lncRNA MALAT1 in pancreatic cancer tissues
    • Liu, J. H., Chen, G., Dang, Y. W., Li, C. J. and Luo, D. Z. Expression and prognostic significance of lncRNA MALAT1 in pancreatic cancer tissues. Asian Pac. J. Cancer Prev. 15 (2014) 2971-2977. DOI: 10.7314/apjcp. 2014.15.7.2971.
    • (2014) Asian Pac. J. Cancer Prev , vol.15 , pp. 2971-2977
    • Liu, J.H.1    Chen, G.2    Dang, Y.W.3    Li, C.J.4    Luo, D.Z.5
  • 116
    • 84918545890 scopus 로고    scopus 로고
    • Pseudogene PTENP1 functions as a competing endogenous RNA to suppress clear-cell renal cell carcinoma progression
    • Yu, G., Yao, W., Gumireddy, K., Li, A., Wang, J., Xiao, W., Chen, K., Xiao, H., Li, H., Tang, K., Ye, Z., Huang, Q. and Xu, H. Pseudogene PTENP1 functions as a competing endogenous RNA to suppress clear-cell renal cell carcinoma progression. Mol. Cancer Ther. 13 (2014) 3086-3097. DOI: 10.1158/1535-7163.mct-14-0245.
    • (2014) Mol. Cancer Ther , vol.13 , pp. 3086-3097
    • Yu, G.1    Yao, W.2    Gumireddy, K.3    Li, A.4    Wang, J.5    Xiao, W.6    Chen, K.7    Xiao, H.8    Li, H.9    Tang, K.10    Ye, Z.11    Huang, Q.12    Xu, H.13
  • 117
    • 38049155825 scopus 로고    scopus 로고
    • Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA
    • Yu, W., Gius, D., Onyango, P., Muldoon-Jacobs, K., Karp, J., Feinberg, A. P. and Cui, H. Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA. Nature 451 (2008) 202-206. DOI: 10.1038/nature06468.
    • (2008) Nature , vol.451 , pp. 202-206
    • Yu, W.1    Gius, D.2    Onyango, P.3    Muldoon-Jacobs, K.4    Karp, J.5    Feinberg, A.P.6    Cui, H.7
  • 118
    • 0038581890 scopus 로고    scopus 로고
    • Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease
    • Tufarelli, C., Stanley, J. A., Garrick, D., Sharpe, J. A., Ayyub, H., Wood, W. G. and Higgs, D. R. Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease. Nat. Genet. 34 (2003) 157-165. DOI: 10.1038/ng1157.
    • (2003) Nat. Genet , vol.34 , pp. 157-165
    • Tufarelli, C.1    Stanley, J.A.2    Garrick, D.3    Sharpe, J.A.4    Ayyub, H.5    Wood, W.G.6    Higgs, D.R.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.