메뉴 건너뛰기




Volumn 114, Issue , 2015, Pages 72-79

The importance of codon-anticodon interactions in translation elongation

Author keywords

Codon usage; Codon anticodon interactions; Efficiency and fidelity; Translation elongation; tRNA modifications

Indexed keywords

TRANSFER RNA; ANTICODON; CODON;

EID: 84930381032     PISSN: 03009084     EISSN: 61831638     Source Type: Journal    
DOI: 10.1016/j.biochi.2015.04.013     Document Type: Short Survey
Times cited : (9)

References (90)
  • 1
    • 84862658718 scopus 로고    scopus 로고
    • Kinetic control of translation initiation in bacteria
    • Jul - Aug.
    • P. Milón, and M.V. Rodnina Kinetic control of translation initiation in bacteria Crit. Rev. Biochem. Mol. Biol. 47 4 Jul - Aug. 2012 334 348
    • (2012) Crit. Rev. Biochem. Mol. Biol. , vol.47 , Issue.4 , pp. 334-348
    • Milón, P.1    Rodnina, M.V.2
  • 2
    • 71549155597 scopus 로고    scopus 로고
    • Eukaryotic initiator tRNA: finely tuned and ready for action
    • Jan.
    • S.E. Kolitz, and J.R. Lorsch Eukaryotic initiator tRNA: finely tuned and ready for action FEBS Lett. 584 2 Jan. 2010 396 404
    • (2010) FEBS Lett. , vol.584 , Issue.2 , pp. 396-404
    • Kolitz, S.E.1    Lorsch, J.R.2
  • 3
    • 80052742721 scopus 로고    scopus 로고
    • Molecular mechanism of scanning and start codon selection in eukaryotes
    • Sep. first page of table of contents
    • A.G. Hinnebusch Molecular mechanism of scanning and start codon selection in eukaryotes Microbiol. Mol. Biol. Rev. 75 3 Sep. 2011 434 467 first page of table of contents
    • (2011) Microbiol. Mol. Biol. Rev. , vol.75 , Issue.3 , pp. 434-467
    • Hinnebusch, A.G.1
  • 4
    • 84878924244 scopus 로고    scopus 로고
    • Structural basis of the translational elongation cycle
    • Jan.
    • R.M. Voorhees, and V. Ramakrishnan Structural basis of the translational elongation cycle Annu. Rev. Biochem. 82 Jan. 2013 203 236
    • (2013) Annu. Rev. Biochem. , vol.82 , pp. 203-236
    • Voorhees, R.M.1    Ramakrishnan, V.2
  • 5
    • 0034075255 scopus 로고    scopus 로고
    • mRNA composition and control of bacterial gene expression
    • Jun.
    • S.T. Liang, Y.C. Xu, P. Dennis, and H. Bremer mRNA composition and control of bacterial gene expression J. Bacteriol. 182 11 Jun. 2000 3037 3044
    • (2000) J. Bacteriol. , vol.182 , Issue.11 , pp. 3037-3044
    • Liang, S.T.1    Xu, Y.C.2    Dennis, P.3    Bremer, H.4
  • 6
    • 33845895536 scopus 로고    scopus 로고
    • The frequency of translational misreading errors in E. coli is largely determined by tRNA competition
    • Jan.
    • E.B. Kramer, and P.J. Farabaugh The frequency of translational misreading errors in E. coli is largely determined by tRNA competition RNA 13 1 Jan. 2007 87 96
    • (2007) RNA , vol.13 , Issue.1 , pp. 87-96
    • Kramer, E.B.1    Farabaugh, P.J.2
  • 7
    • 77956019364 scopus 로고    scopus 로고
    • A comprehensive analysis of translational missense errors in the yeast Saccharomyces cerevisiae
    • Sep.
    • E.B. Kramer, H. Vallabhaneni, L.M. Mayer, and P.J. Farabaugh A comprehensive analysis of translational missense errors in the yeast Saccharomyces cerevisiae RNA 16 9 Sep. 2010 1797 1808
    • (2010) RNA , vol.16 , Issue.9 , pp. 1797-1808
    • Kramer, E.B.1    Vallabhaneni, H.2    Mayer, L.M.3    Farabaugh, P.J.4
  • 9
    • 77954918654 scopus 로고    scopus 로고
    • Visualizing high error levels during gene expression in living bacterial cells
    • Jun.
    • M. Meyerovich, G. Mamou, and S. Ben-Yehuda Visualizing high error levels during gene expression in living bacterial cells Proc. Natl. Acad. Sci. U. S. A. 107 25 Jun. 2010 11543 11548
    • (2010) Proc. Natl. Acad. Sci. U. S. A. , vol.107 , Issue.25 , pp. 11543-11548
    • Meyerovich, M.1    Mamou, G.2    Ben-Yehuda, S.3
  • 10
    • 0037015077 scopus 로고    scopus 로고
    • Specificity of RNA-RNA helix recognition
    • Sep.
    • D.J. Battle, and J.A. Doudna Specificity of RNA-RNA helix recognition Proc. Natl. Acad. Sci. U. S. A. 99 18 Sep. 2002 11676 11681
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , Issue.18 , pp. 11676-11681
    • Battle, D.J.1    Doudna, J.A.2
  • 11
    • 0037184536 scopus 로고    scopus 로고
    • Selection of tRNA by the ribosome requires a transition from an open to a closed Form
    • Nov.
    • J.M. Ogle, F.V. Murphy IV, M.J. Tarry, and V. Ramakrishnan Selection of tRNA by the ribosome requires a transition from an open to a closed Form Cell 111 5 Nov. 2002 721 732
    • (2002) Cell , vol.111 , Issue.5 , pp. 721-732
    • Ogle, J.M.1    Murphy, F.V.2    Tarry, M.J.3    Ramakrishnan, V.4
  • 14
    • 77951974177 scopus 로고    scopus 로고
    • Structural aspects of messenger RNA reading frame maintenance by the ribosome
    • L.B. Jenner, N. Demeshkina, G. Yusupova, and M. Yusupov Structural aspects of messenger RNA reading frame maintenance by the ribosome Nat. Struct. Mol. Biol. 17 5 May 2010 555 560
    • (2010) Nat. Struct. Mol. Biol. , vol.17 , Issue.5 , pp. 555-560
    • Jenner, L.B.1    Demeshkina, N.2    Yusupova, G.3    Yusupov, M.4
  • 16
    • 84859593945 scopus 로고    scopus 로고
    • A new understanding of the decoding principle on the ribosome
    • Apr.
    • N. Demeshkina, L. Jenner, E. Westhof, M. Yusupov, and G. Yusupova A new understanding of the decoding principle on the ribosome Nature 484 7393 Apr. 2012 256 259
    • (2012) Nature , vol.484 , Issue.7393 , pp. 256-259
    • Demeshkina, N.1    Jenner, L.2    Westhof, E.3    Yusupov, M.4    Yusupova, G.5
  • 17
    • 0015223081 scopus 로고
    • Tryptophan transfer RNA as the UGA suppressor
    • D. Hirsh Tryptophan transfer RNA as the UGA suppressor J. Mol. Biol. 58 1971 439 458
    • (1971) J. Mol. Biol. , vol.58 , pp. 439-458
    • Hirsh, D.1
  • 18
    • 0000359208 scopus 로고
    • Kinetic proofreading: a new mechanism for reducing errors in biosynthetic processes requiring high specificity
    • J.J. Hopfield Kinetic proofreading: a new mechanism for reducing errors in biosynthetic processes requiring high specificity Proc. Natl. Acad. Sci. U. S. A. 71 10 1974 4135 4139
    • (1974) Proc. Natl. Acad. Sci. U. S. A. , vol.71 , Issue.10 , pp. 4135-4139
    • Hopfield, J.J.1
  • 19
    • 0018965805 scopus 로고
    • Thermodynamic constraints on kinetic proofreading in biosynthetic pathways
    • M. Ehrenberg, and C. Blomberg Thermodynamic constraints on kinetic proofreading in biosynthetic pathways Biophys. J. 31 1980 333 358
    • (1980) Biophys. J. , vol.31 , pp. 333-358
    • Ehrenberg, M.1    Blomberg, C.2
  • 20
    • 84926099778 scopus 로고    scopus 로고
    • Mammalian translation elongation factor eEF1A2: X-ray structure and new features of GDP/GTP exchange mechanism in higher eukaryotes
    • Nov.
    • T. Crepin, V.F. Shalak, A.D. Yaremchuk, D.O. Vlasenko, A. McCarthy, B.S. Negrutskii, M.A. Tukalo, and A.V. El'skaya Mammalian translation elongation factor eEF1A2: X-ray structure and new features of GDP/GTP exchange mechanism in higher eukaryotes Nucleic Acids Res. 42 20 Nov. 2014 12939 12948
    • (2014) Nucleic Acids Res. , vol.42 , Issue.20 , pp. 12939-12948
    • Crepin, T.1    Shalak, V.F.2    Yaremchuk, A.D.3    Vlasenko, D.O.4    McCarthy, A.5    Negrutskii, B.S.6    Tukalo, M.A.7    El'skaya, A.V.8
  • 22
    • 84880984667 scopus 로고    scopus 로고
    • 5C967, and the S9 C-terminal tail in maintenance of the reading frame during translational elongation in Escherichia coli
    • Aug.
    • 5C967, and the S9 C-terminal tail in maintenance of the reading frame during translational elongation in Escherichia coli J. Bacteriol. 195 16 Aug. 2013 3524 3530
    • (2013) J. Bacteriol. , vol.195 , Issue.16 , pp. 3524-3530
    • Arora, S.1    Bhamidimarri, S.P.2    Weber, M.H.W.3    Varshney, U.4
  • 23
    • 70350602056 scopus 로고    scopus 로고
    • The structure of the ribosome with elongation factor G trapped in the posttranslocational state
    • Oct.
    • Y.-G. Gao, M. Selmer, C.M. Dunham, A. Weixlbaumer, A.C. Kelley, and V. Ramakrishnan The structure of the ribosome with elongation factor G trapped in the posttranslocational state Science 326 5953 Oct. 2009 694 699
    • (2009) Science , vol.326 , Issue.5953 , pp. 694-699
    • Gao, Y.-G.1    Selmer, M.2    Dunham, C.M.3    Weixlbaumer, A.4    Kelley, A.C.5    Ramakrishnan, V.6
  • 24
    • 64849114915 scopus 로고    scopus 로고
    • Coding-sequence determinants of gene expression in Escherichia coli
    • Apr.
    • G. Kudla, A.W. Murray, D. Tollervey, and J.B. Plotkin Coding-sequence determinants of gene expression in Escherichia coli Science 324 5924 Apr. 2009 255 258
    • (2009) Science , vol.324 , Issue.5924 , pp. 255-258
    • Kudla, G.1    Murray, A.W.2    Tollervey, D.3    Plotkin, J.B.4
  • 25
    • 0032699491 scopus 로고    scopus 로고
    • Synonymous codon substitutions affect ribosome traffic and protein folding during in vitro translation
    • A.A. Komar, T. Lesnik, and C. Reiss Synonymous codon substitutions affect ribosome traffic and protein folding during in vitro translation FEBS Lett. 462 1999 387 391
    • (1999) FEBS Lett. , vol.462 , pp. 387-391
    • Komar, A.A.1    Lesnik, T.2    Reiss, C.3
  • 27
    • 0023650543 scopus 로고
    • The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications
    • Feb.
    • P.M. Sharp, and W.H. Li The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications Nucleic Acids Res. 15 3 Feb. 1987 1281 1295
    • (1987) Nucleic Acids Res. , vol.15 , Issue.3 , pp. 1281-1295
    • Sharp, P.M.1    Li, W.H.2
  • 28
    • 4644280499 scopus 로고    scopus 로고
    • Solving the riddle of codon usage preferences: a test for translational selection
    • Jan.
    • M. dos Reis, R. Savva, and L. Wernisch Solving the riddle of codon usage preferences: a test for translational selection Nucleic Acids Res. 32 17 Jan. 2004 5036 5044
    • (2004) Nucleic Acids Res. , vol.32 , Issue.17 , pp. 5036-5044
    • Dos Reis, M.1    Savva, R.2    Wernisch, L.3
  • 29
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • T. Ikemura Codon usage and tRNA content in unicellular and multicellular organisms Mol. Biol. Evol. 2 1 1985 13 34
    • (1985) Mol. Biol. Evol. , vol.2 , Issue.1 , pp. 13-34
    • Ikemura, T.1
  • 30
  • 31
    • 84859174156 scopus 로고    scopus 로고
    • A role for tRNA modifications in genome structure and codon usage
    • Mar.
    • E.M. Novoa, M. Pavon-Eternod, T. Pan, and L. Ribas de Pouplana A role for tRNA modifications in genome structure and codon usage Cell 149 1 Mar. 2012 202 213
    • (2012) Cell , vol.149 , Issue.1 , pp. 202-213
    • Novoa, E.M.1    Pavon-Eternod, M.2    Pan, T.3    Ribas De Pouplana, L.4
  • 32
    • 17444449538 scopus 로고    scopus 로고
    • Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae
    • May
    • R. Percudani, A. Pavesi, and S. Ottonello Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae J. Mol. Biol. 268 2 May 1997 322 330
    • (1997) J. Mol. Biol. , vol.268 , Issue.2 , pp. 322-330
    • Percudani, R.1    Pavesi, A.2    Ottonello, S.3
  • 33
    • 0032882170 scopus 로고    scopus 로고
    • Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis
    • Sept.
    • S. Kanaya, Y. Yamada, Y. Kudo, and T. Ikemura Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis Gene 238 1 Sep. 1999 143 155
    • (1999) Gene , vol.238 , Issue.1 , pp. 143-155
    • Kanaya, S.1    Yamada, Y.2    Kudo, Y.3    Ikemura, T.4
  • 34
    • 0019824131 scopus 로고
    • Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system
    • Sep.
    • T. Ikemura Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system J. Mol. Biol. 151 3 Sep. 1981 389 409
    • (1981) J. Mol. Biol. , vol.151 , Issue.3 , pp. 389-409
    • Ikemura, T.1
  • 35
    • 0024405193 scopus 로고
    • Codon usage determines translation rate in Escherichia coli
    • May
    • M.A. Sørensen, C.G. Kurland, and S. Pedersen Codon usage determines translation rate in Escherichia coli J. Mol. Biol. 207 2 May 1989 365 377
    • (1989) J. Mol. Biol. , vol.207 , Issue.2 , pp. 365-377
    • Sørensen, M.A.1    Kurland, C.G.2    Pedersen, S.3
  • 36
  • 37
    • 0030564828 scopus 로고    scopus 로고
    • Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates
    • Aug.
    • H. Dong, L. Nilsson, and C.G. Kurland Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates J. Mol. Biol. 260 5 Aug. 1996 649 663
    • (1996) J. Mol. Biol. , vol.260 , Issue.5 , pp. 649-663
    • Dong, H.1    Nilsson, L.2    Kurland, C.G.3
  • 39
    • 68249130936 scopus 로고    scopus 로고
    • Clustering of codons with rare cognate tRNAs in human genes suggests an extra level of expression regulation
    • Jul.
    • J.L. Parmley, and M.A. Huynen Clustering of codons with rare cognate tRNAs in human genes suggests an extra level of expression regulation PLoS Genet. 5 7 Jul. 2009 e1000548
    • (2009) PLoS Genet. , vol.5 , Issue.7
    • Parmley, J.L.1    Huynen, M.A.2
  • 40
    • 0034821884 scopus 로고    scopus 로고
    • Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis
    • S. Kanaya, Y. Yamada, M. Kinouchi, Y. Kudo, and T. Ikemura Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis J. Mol. Evol. 53 4-5 2001 290 298
    • (2001) J. Mol. Evol. , vol.53 , Issue.4-5 , pp. 290-298
    • Kanaya, S.1    Yamada, Y.2    Kinouchi, M.3    Kudo, Y.4    Ikemura, T.5
  • 41
    • 0034237669 scopus 로고    scopus 로고
    • tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes
    • L. Duret tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes Trends Genet. 16 7 2000 287 289
    • (2000) Trends Genet. , vol.16 , Issue.7 , pp. 287-289
    • Duret, L.1
  • 42
    • 33846021292 scopus 로고    scopus 로고
    • Tissue-specific differences in human transfer RNA expression
    • Dec.
    • K.A. Dittmar, J.M. Goodenbour, and T. Pan Tissue-specific differences in human transfer RNA expression PLoS Genet. 2 12 Dec. 2006 e221
    • (2006) PLoS Genet. , vol.2 , Issue.12 , pp. e221
    • Dittmar, K.A.1    Goodenbour, J.M.2    Pan, T.3
  • 44
    • 0344898766 scopus 로고
    • Evidence for use of rare codons in the dnaG gene and other regulatory genes of Escherichia coli
    • Feb.
    • W. Konigsberg, and G.N. Godson Evidence for use of rare codons in the dnaG gene and other regulatory genes of Escherichia coli Proc. Natl. Acad. Sci. U. S. A. 80 3 Feb. 1983 687 691
    • (1983) Proc. Natl. Acad. Sci. U. S. A. , vol.80 , Issue.3 , pp. 687-691
    • Konigsberg, W.1    Godson, G.N.2
  • 45
    • 0021731777 scopus 로고
    • Escherichia coli ribosomes translate in vivo with variable rate
    • Dec.
    • S. Pedersen Escherichia coli ribosomes translate in vivo with variable rate EMBO J. 3 12 Dec. 1984 2895 2898
    • (1984) EMBO J. , vol.3 , Issue.12 , pp. 2895-2898
    • Pedersen, S.1
  • 46
    • 0026010217 scopus 로고
    • Low-usage codons in Escherichia coli, yeast, fruit fly and primates
    • Aug.
    • S.P. Zhang, G. Zubay, and E. Goldman Low-usage codons in Escherichia coli, yeast, fruit fly and primates Gene 105 1 Aug. 1991 61 72
    • (1991) Gene , vol.105 , Issue.1 , pp. 61-72
    • Zhang, S.P.1    Zubay, G.2    Goldman, E.3
  • 48
    • 84859219968 scopus 로고    scopus 로고
    • Balanced codon usage optimizes eukaryotic translational efficiency
    • Jan.
    • W. Qian, J.-R. Yang, N.M. Pearson, C. Maclean, and J. Zhang Balanced codon usage optimizes eukaryotic translational efficiency PLoS Genet. 8 3 Jan. 2012 e1002603
    • (2012) PLoS Genet. , vol.8 , Issue.3
    • Qian, W.1    Yang, J.-R.2    Pearson, N.M.3    Maclean, C.4    Zhang, J.5
  • 49
    • 84899821225 scopus 로고    scopus 로고
    • Deciphering the rules by which dynamics of mRNA secondary structure affect translation efficiency in Saccharomyces cerevisiae
    • Apr.
    • Y. Mao, H. Liu, Y. Liu, and S. Tao Deciphering the rules by which dynamics of mRNA secondary structure affect translation efficiency in Saccharomyces cerevisiae Nucleic Acids Res. 42 8 Apr. 2014 4813 4822
    • (2014) Nucleic Acids Res. , vol.42 , Issue.8 , pp. 4813-4822
    • Mao, Y.1    Liu, H.2    Liu, Y.3    Tao, S.4
  • 50
    • 0029908504 scopus 로고    scopus 로고
    • Protein secondary structural types are differentially coded on messenger RNA
    • Oct.
    • T.A. Thanaraj, and P. Argos Protein secondary structural types are differentially coded on messenger RNA Protein Sci. 5 10 Oct. 1996 1973 1983
    • (1996) Protein Sci. , vol.5 , Issue.10 , pp. 1973-1983
    • Thanaraj, T.A.1    Argos, P.2
  • 51
    • 67649356943 scopus 로고    scopus 로고
    • Translationally optimal codons associate with structurally sensitive sites in proteins
    • Jul.
    • T. Zhou, M. Weems, and C.O. Wilke Translationally optimal codons associate with structurally sensitive sites in proteins Mol. Biol. Evol. 26 7 Jul. 2009 1571 1580
    • (2009) Mol. Biol. Evol. , vol.26 , Issue.7 , pp. 1571-1580
    • Zhou, T.1    Weems, M.2    Wilke, C.O.3
  • 52
    • 0038179369 scopus 로고    scopus 로고
    • Selective charging of tRNA isoacceptors explains patterns of codon usage
    • Jun.
    • J. Elf, D. Nilsson, T. Tenson, and M. Ehrenberg Selective charging of tRNA isoacceptors explains patterns of codon usage Science 300 5626 Jun. 2003 1718 1722
    • (2003) Science , vol.300 , Issue.5626 , pp. 1718-1722
    • Elf, J.1    Nilsson, D.2    Tenson, T.3    Ehrenberg, M.4
  • 53
    • 14644396660 scopus 로고    scopus 로고
    • Selective charging of tRNA isoacceptors induced by amino-acid starvation
    • Feb.
    • K.A. Dittmar, M.A. Sørensen, J. Elf, M. Ehrenberg, and T. Pan Selective charging of tRNA isoacceptors induced by amino-acid starvation EMBO Rep. 6 2 Feb. 2005 151 157
    • (2005) EMBO Rep. , vol.6 , Issue.2 , pp. 151-157
    • Dittmar, K.A.1    Sørensen, M.A.2    Elf, J.3    Ehrenberg, M.4    Pan, T.5
  • 54
    • 42149137980 scopus 로고    scopus 로고
    • tRNA's modifications bring order to gene expression
    • Apr.
    • E.M. Gustilo, F.A. Vendeix, and P.F. Agris tRNA's modifications bring order to gene expression Curr. Opin. Microbiol. 11 2 Apr. 2008 134 140
    • (2008) Curr. Opin. Microbiol. , vol.11 , Issue.2 , pp. 134-140
    • Gustilo, E.M.1    Vendeix, F.A.2    Agris, P.F.3
  • 55
    • 84870152928 scopus 로고    scopus 로고
    • Biosynthesis and function of posttranscriptional modifications of transfer RNAs
    • Jan.
    • B. El Yacoubi, M. Bailly, and V. de Crécy-Lagard Biosynthesis and function of posttranscriptional modifications of transfer RNAs Annu. Rev. Genet. 46 Jan. 2012 69 95
    • (2012) Annu. Rev. Genet. , vol.46 , pp. 69-95
    • El Yacoubi, B.1    Bailly, M.2    De Crécy-Lagard, V.3
  • 57
    • 1242309517 scopus 로고    scopus 로고
    • Decoding the genome: a modified view
    • Jan.
    • P.F. Agris Decoding the genome: a modified view Nucleic Acids Res. 32 1 Jan. 2004 223 238
    • (2004) Nucleic Acids Res. , vol.32 , Issue.1 , pp. 223-238
    • Agris, P.F.1
  • 58
    • 78650683942 scopus 로고    scopus 로고
    • A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress
    • Dec.
    • C.T.Y. Chan, M. Dyavaiah, M.S. DeMott, K. Taghizadeh, P.C. Dedon, and T.J. Begley A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress PLoS Genet. 6 12 Dec. 2010 e1001247
    • (2010) PLoS Genet. , vol.6 , Issue.12
    • Chan, C.T.Y.1    Dyavaiah, M.2    Demott, M.S.3    Taghizadeh, K.4    Dedon, P.C.5    Begley, T.J.6
  • 61
    • 84894436024 scopus 로고    scopus 로고
    • Posttranscriptional RNA Modifications: playing metabolic games in a cell's chemical Legoland
    • Feb.
    • M. Helm, and J.D. Alfonzo Posttranscriptional RNA Modifications: playing metabolic games in a cell's chemical Legoland Chem. Biol. 21 2 Feb. 2014 174 185
    • (2014) Chem. Biol. , vol.21 , Issue.2 , pp. 174-185
    • Helm, M.1    Alfonzo, J.D.2
  • 62
    • 84860361133 scopus 로고    scopus 로고
    • Determinants of tRNA editing and modification: avoiding conundrums, affecting function
    • Z. Paris, I.M.C. Fleming, and J.D. Alfonzo Determinants of tRNA editing and modification: avoiding conundrums, affecting function Semin. Cell Dev. Biol. 23 2012 269 274
    • (2012) Semin. Cell Dev. Biol. , vol.23 , pp. 269-274
    • Paris, Z.1    Fleming, I.M.C.2    Alfonzo, J.D.3
  • 63
    • 84871436566 scopus 로고    scopus 로고
    • Transfer RNA modifications: nature's combinatorial chemistry playground
    • J.E. Jackman, and J.D. Alfonzo Transfer RNA modifications: nature's combinatorial chemistry playground Wiley Interdiscip. Rev. RNA 4 1 2014 35 48
    • (2014) Wiley Interdiscip. Rev. RNA , vol.4 , Issue.1 , pp. 35-48
    • Jackman, J.E.1    Alfonzo, J.D.2
  • 64
    • 80053194776 scopus 로고    scopus 로고
    • Plasticity and diversity of tRNA anticodon determinants of substrate recognition by eukaryotic A37 isopentenyltransferases
    • Oct.
    • T.N. Lamichhane, N.H. Blewett, and R.J. Maraia Plasticity and diversity of tRNA anticodon determinants of substrate recognition by eukaryotic A37 isopentenyltransferases RNA 17 10 Oct. 2011 1846 1857
    • (2011) RNA , vol.17 , Issue.10 , pp. 1846-1857
    • Lamichhane, T.N.1    Blewett, N.H.2    Maraia, R.J.3
  • 66
    • 33644856584 scopus 로고    scopus 로고
    • C to U editing stimulates A to I editing in the anticodon loop of a cytoplasmic threonyl tRNA in Trypanosoma brucei
    • Jan.
    • M.A.T. Rubio, F.L. Ragone, K.W. Gaston, M. Ibba, and J.D. Alfonzo C to U editing stimulates A to I editing in the anticodon loop of a cytoplasmic threonyl tRNA in Trypanosoma brucei J. Biol. Chem. 281 1 Jan. 2006 115 120
    • (2006) J. Biol. Chem. , vol.281 , Issue.1 , pp. 115-120
    • Rubio, M.A.T.1    Ragone, F.L.2    Gaston, K.W.3    Ibba, M.4    Alfonzo, J.D.5
  • 67
    • 0027104840 scopus 로고
    • Translational accuracy and the fitness of bacteria
    • C.G. Kurland Translational accuracy and the fitness of bacteria Annu. Rev. Genet. 26 1992 29 50
    • (1992) Annu. Rev. Genet. , vol.26 , pp. 29-50
    • Kurland, C.G.1
  • 69
    • 34848812962 scopus 로고    scopus 로고
    • Ribonucleome analysis identified enzyme genes responsible for wybutosine synthesis
    • Jan.
    • A. Noma, and T. Suzuki Ribonucleome analysis identified enzyme genes responsible for wybutosine synthesis Nucleic Acids Symp. Ser. 50 Jan. 2006 65 66
    • (2006) Nucleic Acids Symp. Ser. , Issue.50 , pp. 65-66
    • Noma, A.1    Suzuki, T.2
  • 71
    • 1342271370 scopus 로고    scopus 로고
    • Transfer RNA modifications that alter +1 frameshifting in general fail to affect -1 frameshifting
    • Jun.
    • J. Urbonavicius, G. Stahl, J.M.B. Durand, S.N. Ben Salem, Q. Qian, P.J. Farabaugh, and G.R. Björk Transfer RNA modifications that alter +1 frameshifting in general fail to affect -1 frameshifting RNA 9 6 Jun. 2003 760 768
    • (2003) RNA , vol.9 , Issue.6 , pp. 760-768
    • Urbonavicius, J.1    Stahl, G.2    Durand, J.M.B.3    Ben Salem, S.N.4    Qian, Q.5    Farabaugh, P.J.6    Björk, G.R.7
  • 72
    • 0029870925 scopus 로고    scopus 로고
    • Programmed translational frameshifting
    • Mar.
    • P.J. Farabaugh Programmed translational frameshifting Microbiol. Rev. 60 1 Mar. 1996 103 134
    • (1996) Microbiol. Rev. , vol.60 , Issue.1 , pp. 103-134
    • Farabaugh, P.J.1
  • 73
    • 64049083335 scopus 로고    scopus 로고
    • A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment
    • Mar.
    • J.F. Atkins, and G.R. Björk A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment Microbiol. Mol. Biol. Rev. 73 1 Mar. 2009 178 210
    • (2009) Microbiol. Mol. Biol. Rev. , vol.73 , Issue.1 , pp. 178-210
    • Atkins, J.F.1    Björk, G.R.2
  • 74
    • 0035801515 scopus 로고    scopus 로고
    • Improvement of reading frame maintenance is a common function for several tRNA modifications
    • Sep.
    • J. Urbonavicius, Q. Qian, J.M. Durand, T.G. Hagervall, and G.R. Björk Improvement of reading frame maintenance is a common function for several tRNA modifications EMBO J. 20 17 Sep. 2001 4863 4873
    • (2001) EMBO J. , vol.20 , Issue.17 , pp. 4863-4873
    • Urbonavicius, J.1    Qian, Q.2    Durand, J.M.3    Hagervall, T.G.4    Björk, G.R.5
  • 75
    • 34548816729 scopus 로고    scopus 로고
    • Role of a tRNA base modification and its precursors in frameshifting in eukaryotes
    • Sep.
    • W.F. Waas, Z. Druzina, M. Hanan, and P. Schimmel Role of a tRNA base modification and its precursors in frameshifting in eukaryotes J. Biol. Chem. 282 36 Sep. 2007 26026 26034
    • (2007) J. Biol. Chem. , vol.282 , Issue.36 , pp. 26026-26034
    • Waas, W.F.1    Druzina, Z.2    Hanan, M.3    Schimmel, P.4
  • 76
    • 0344026255 scopus 로고    scopus 로고
    • Single atom modification (O - >S) of tRNA confers ribosome binding
    • S.S. Ashraf, E. Sochacka, R. Cain, R. Guenther, A. Malkiewicz, and P.F. Agris Single atom modification (O - >S) of tRNA confers ribosome binding RNA 5 2 Feb. 1999 188 194
    • (1999) RNA , vol.5 , Issue.2 , pp. 188-194
    • Ashraf, S.S.1    Sochacka, E.2    Cain, R.3    Guenther, R.4    Malkiewicz, A.5    Agris, P.F.6
  • 77
    • 34447518814 scopus 로고    scopus 로고
    • A conserved modified wobble nucleoside (mcm5s2U) in lysyl-tRNA is required for viability in yeast
    • G.R. Björk, B. Huang, O.P. Persson, and A.S. Byström A conserved modified wobble nucleoside (mcm5s2U) in lysyl-tRNA is required for viability in yeast RNA 13 8 Aug. 2007 1245 1255
    • (2007) RNA , vol.13 , Issue.8 , pp. 1245-1255
    • Björk, G.R.1    Huang, B.2    Persson, O.P.3    Byström, A.S.4
  • 79
    • 84867673706 scopus 로고    scopus 로고
    • Discovery and biological characterization of geranylated RNA in bacteria
    • C.E. Dumelin, Y. Chen, A.M. Leconte, Y.G. Chen, and D.R. Liu Discovery and biological characterization of geranylated RNA in bacteria Nat. Chem. Biol. 8 11 Nov. 2012 913 919
    • (2012) Nat. Chem. Biol. , vol.8 , Issue.11 , pp. 913-919
    • Dumelin, C.E.1    Chen, Y.2    Leconte, A.M.3    Chen, Y.G.4    Liu, D.R.5
  • 81
    • 0025182710 scopus 로고
    • A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon
    • F. Weber, A. Dietrich, J.H. Weil, and L. Maréchal-Drouard A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon Nucleic Acids Res. 18 17 Sep. 1990 5027 5030
    • (1990) Nucleic Acids Res. , vol.18 , Issue.17 , pp. 5027-5030
    • Weber, F.1    Dietrich, A.2    Weil, J.H.3    Maréchal-Drouard, L.4
  • 82
    • 0023734317 scopus 로고
    • Codon and amino-acid specifities of a transfer RNA are both converted by a single post-transcriptional modification
    • T. Muramatsu, K. Nishikawa, F. Nemoto, Y. Kuchino, S. Nishimura, T. Miyazawa, and S. Yokoyama Codon and amino-acid specifities of a transfer RNA are both converted by a single post-transcriptional modification Nature 336 1988 179 181
    • (1988) Nature , vol.336 , pp. 179-181
    • Muramatsu, T.1    Nishikawa, K.2    Nemoto, F.3    Kuchino, Y.4    Nishimura, S.5    Miyazawa, T.6    Yokoyama, S.7
  • 88
    • 0033527628 scopus 로고    scopus 로고
    • An adenosine deaminase that generates inosine at the wobble position of tRNAs
    • A.P. Gerber, and W. Keller An adenosine deaminase that generates inosine at the wobble position of tRNAs Science 286 5442 Nov. 1999 1146 1149
    • (1999) Science , vol.286 , Issue.5442 , pp. 1146-1149
    • Gerber, A.P.1    Keller, W.2
  • 90
    • 0025876244 scopus 로고
    • Channeling of aminoacyl-tRNA for protein synthesis in vivo
    • Jun.
    • B.S. Negrutskii, and M.P. Deutscher Channeling of aminoacyl-tRNA for protein synthesis in vivo Proc. Natl. Acad. Sci. U. S. A. 88 11 Jun. 1991 4991 4995
    • (1991) Proc. Natl. Acad. Sci. U. S. A. , vol.88 , Issue.11 , pp. 4991-4995
    • Negrutskii, B.S.1    Deutscher, M.P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.