메뉴 건너뛰기




Volumn 268, Issue 2, 1997, Pages 322-330

Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae

Author keywords

Amino acid usage; Codon usage; Search algorithm; Translational selection; tRNA gene copy number

Indexed keywords

TRANSFER RNA;

EID: 17444449538     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1997.0942     Document Type: Article
Times cited : (243)

References (25)
  • 1
    • 0022051260 scopus 로고
    • Concerted evolution of tRNA genes: Intergenic conversion among three unlinked serine tRNA genes in S. pombe
    • Amstutz H., Munz P., Heyer W. D., Leupold U., Kohli J. Concerted evolution of tRNA genes: intergenic conversion among three unlinked serine tRNA genes in S. pombe. Cell. 40:1985;879-886.
    • (1985) Cell , vol.40 , pp. 879-886
    • Amstutz, H.1    Munz, P.2    Heyer, W.D.3    Leupold, U.4    Kohli, J.5
  • 2
  • 3
    • 0025941139 scopus 로고
    • The selection-mutation-drift theory of synonymous codon usage
    • Bulmer M. The selection-mutation-drift theory of synonymous codon usage. Genetics. 129:1991;897-907.
    • (1991) Genetics , vol.129 , pp. 897-907
    • Bulmer, M.1
  • 4
    • 0030564828 scopus 로고    scopus 로고
    • Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates
    • Dong H., Nilsson L., Kurland C. G. Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates. J. Mol. Biol. 260:1996;649-663.
    • (1996) J. Mol. Biol. , vol.260 , pp. 649-663
    • Dong, H.1    Nilsson, L.2    Kurland, C.G.3
  • 6
    • 0025845702 scopus 로고
    • Exceptional codon recognition by the glutamine tRNAs in Saccharomyces cerevisiae
    • Edelman I., Culbertson M. R. Exceptional codon recognition by the glutamine tRNAs in Saccharomyces cerevisiae. EMBO J. 10:1991;1481-1491.
    • (1991) EMBO J. , vol.10 , pp. 1481-1491
    • Edelman, I.1    Culbertson, M.R.2
  • 7
    • 0025864008 scopus 로고
    • Identifying potential tRNA genes in genomic DNA sequences
    • Fichant G. A., Burks C. Identifying potential tRNA genes in genomic DNA sequences. J. Mol. Biol. 220:1991;659-671.
    • (1991) J. Mol. Biol. , vol.220 , pp. 659-671
    • Fichant, G.A.1    Burks, C.2
  • 8
    • 0029883703 scopus 로고    scopus 로고
    • YPD-a database for the proteins of Saccharomyces cerevisiae
    • Garrels J. L. YPD-a database for the proteins of Saccharomyces cerevisiae. Nucl. Acids Res. 24:1996;46-49.
    • (1996) Nucl. Acids Res. , vol.24 , pp. 46-49
    • Garrels, J.L.1
  • 12
    • 0019949369 scopus 로고
    • Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes
    • Ikemura T. Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. J. Mol. Biol. 158:1982;573-597.
    • (1982) J. Mol. Biol. , vol.158 , pp. 573-597
    • Ikemura, T.1
  • 13
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • Ikemura T. Codon usage and tRNA content in unicellular and multicellular organisms. Mol. Biol. Evol. 2:1985;13-34.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 13-34
    • Ikemura, T.1
  • 14
    • 0024969080 scopus 로고
    • The codon CUG is read as serine in an asporogenic yeast Candida cylindracea
    • Kawaguchi Y., Honda H., Morimura T. J., Iwasaki S. The codon CUG is read as serine in an asporogenic yeast Candida cylindracea. Nature. 341:1989;164-166.
    • (1989) Nature , vol.341 , pp. 164-166
    • Kawaguchi, Y.1    Honda, H.2    Morimura, T.J.3    Iwasaki, S.4
  • 15
    • 0025269273 scopus 로고
    • Genomic organization and physical mapping of transfer RNA genes in Escherichia coli K12
    • Komine Y., Adachi H., Inokuchi H., Ozeki H. Genomic organization and physical mapping of transfer RNA genes in Escherichia coli K12. J. Mol. Biol. 212:1990;579-598.
    • (1990) J. Mol. Biol. , vol.212 , pp. 579-598
    • Komine, Y.1    Adachi, H.2    Inokuchi, H.3    Ozeki, H.4
  • 16
    • 0029084597 scopus 로고
    • Analysis of action of the wobble adenine on codon reading within the ribosome
    • Lim V. I. Analysis of action of the wobble adenine on codon reading within the ribosome. J. Mol. Biol. 252:1995;277-282.
    • (1995) J. Mol. Biol. , vol.252 , pp. 277-282
    • Lim, V.I.1
  • 17
    • 0028088517 scopus 로고
    • Hydrophobicity, expressivity and aromaticity of amino acid usage in 999 Escherichia coli chromosome-encoded genes
    • Lobry J. R., Gautier C. Hydrophobicity, expressivity and aromaticity of amino acid usage in 999 Escherichia coli chromosome-encoded genes. Nucl. Acids Res. 22:1994;3174-3180.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 3174-3180
    • Lobry, J.R.1    Gautier, C.2
  • 19
    • 0028214356 scopus 로고
    • Identification of new eucaryotic tRNA genes in genomic DNA databases by a multistep weight matrix analysis of transcriptional control regions
    • Pavesi A., Conterio F., Bolchi A., Dieci G., Ottonello S. Identification of new eucaryotic tRNA genes in genomic DNA databases by a multistep weight matrix analysis of transcriptional control regions. Nucl. Acids Res. 22:1994;1247-1256.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 1247-1256
    • Pavesi, A.1    Conterio, F.2    Bolchi, A.3    Dieci, G.4    Ottonello, S.5
  • 20
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson W. R., Lipman D. J. Improved tools for biological sequence comparison. Proc. Natl Acad. Sci. USA. 85:1988;2444-2448.
    • (1988) Proc. Natl Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 21
    • 0023650543 scopus 로고
    • The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications
    • Sharp P. M., Li W. H. The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications. Nucl. Acids Res. 15:1987;1281-1295.
    • (1987) Nucl. Acids Res. , vol.15 , pp. 1281-1295
    • Sharp, P.M.1    Li, W.H.2
  • 23
    • 0028073194 scopus 로고
    • Special peptidyl-tRNA molecules can promote translational frameshifting without slippage
    • Vimaladithan A., Farabaugh P. J. Special peptidyl-tRNA molecules can promote translational frameshifting without slippage. Mol. Cell. Biol. 14:1994;8107-8116.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 8107-8116
    • Vimaladithan, A.1    Farabaugh, P.J.2
  • 25
    • 0026048796 scopus 로고
    • Levels of tRNAs in bacterial cells as affected by amino acid usage in proteins
    • Yamao F., Andachi Y., Muto A., Ikemura T., Osawa S. Levels of tRNAs in bacterial cells as affected by amino acid usage in proteins. Nucl. Acids Res. 19:1991;6119-6122.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 6119-6122
    • Yamao, F.1    Andachi, Y.2    Muto, A.3    Ikemura, T.4    Osawa, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.