-
1
-
-
84873105668
-
Frustration in the energy landscapes of multidomain protein misfolding
-
Zheng W, Schafer NP, Wolynes PG, (2013) Frustration in the energy landscapes of multidomain protein misfolding. Proc Natl Acad Sci U S A 110: 1680–5.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 1680-1685
-
-
Zheng, W.1
Schafer, N.P.2
Wolynes, P.G.3
-
2
-
-
80055033153
-
Single-molecule fluorescence spectroscopy maps the folding landscape of a large protein
-
Pirchi M, Ziv G, Riven I, Cohen SS, Zohar N, et al. (2011) Single-molecule fluorescence spectroscopy maps the folding landscape of a large protein. Nat Commun 2: 493.
-
(2011)
Nat Commun
, vol.2
, pp. 493
-
-
Pirchi, M.1
Ziv, G.2
Riven, I.3
Cohen, S.S.4
Zohar, N.5
-
3
-
-
37049027476
-
Reversible and irreversible unfolding of multi-domain proteins
-
Strucksberg KH, Rosenkranz T, Fitter J, (2007) Reversible and irreversible unfolding of multi-domain proteins. Biochim Biophys Acta 1774: 1591–603.
-
(2007)
Biochim Biophys Acta
, vol.1774
, pp. 1591-1603
-
-
Strucksberg, K.H.1
Rosenkranz, T.2
Fitter, J.3
-
4
-
-
79953747234
-
Cooperativity, local-nonlocal coupling, and nonnative interactions: principles of protein folding from coarse-grained models
-
Chan HS, Zhang Z, Wallin S, Liu Z, (2011) Cooperativity, local-nonlocal coupling, and nonnative interactions: principles of protein folding from coarse-grained models. Ann Rev Phys Chem 62: 301–26.
-
(2011)
Ann Rev Phys Chem
, vol.62
, pp. 301-326
-
-
Chan, H.S.1
Zhang, Z.2
Wallin, S.3
Liu, Z.4
-
5
-
-
0033200063
-
Protein misfolding, evolution and disease
-
Dobson CM, (1999) Protein misfolding, evolution and disease. Trends Biochem Sci 24: 329–32.
-
(1999)
Trends Biochem Sci
, vol.24
, pp. 329-332
-
-
Dobson, C.M.1
-
6
-
-
33947501381
-
The folding and evolution of multidomain proteins
-
Han J-H, Batey S, Nickson AA, Teichmann SA, Clarke J, (2007) The folding and evolution of multidomain proteins. Nat Rev Mol Cell Biol 8: 319–30.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 319-330
-
-
Han, J.-H.1
Batey, S.2
Nickson, A.A.3
Teichmann, S.A.4
Clarke, J.5
-
7
-
-
0026567099
-
The molecular basis of cooperativity in protein folding. Thermodynamic dissection of interdomain interactions in phosphoglycerate kinase
-
Freire E, Murphy KP, Sanchez-Ruiz JM, Galisteo ML, Privalov PL, (1992) The molecular basis of cooperativity in protein folding. Thermodynamic dissection of interdomain interactions in phosphoglycerate kinase. Biochemistry 31: 250–6.
-
(1992)
Biochemistry
, vol.31
, pp. 250-256
-
-
Freire, E.1
Murphy, K.P.2
Sanchez-Ruiz, J.M.3
Galisteo, M.L.4
Privalov, P.L.5
-
8
-
-
84865403286
-
Multidomain protein solves the folding problem by multifunnel combined landscape: theoretical investigation of a Y-family DNA polymerase
-
Wang Y, Chu X, Suo Z, Wang E, Wang J, (2012) Multidomain protein solves the folding problem by multifunnel combined landscape: theoretical investigation of a Y-family DNA polymerase. J Am Chem Soc 134: 13755–64.
-
(2012)
J Am Chem Soc
, vol.134
, pp. 13755-13764
-
-
Wang, Y.1
Chu, X.2
Suo, Z.3
Wang, E.4
Wang, J.5
-
9
-
-
52949100202
-
Cooperativity, connectivity, and folding pathways of multidomain proteins
-
Itoh K, Sasai M, (2008) Cooperativity, connectivity, and folding pathways of multidomain proteins. Proc Natl Acad Sci U S A 105: 13865–70.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 13865-13870
-
-
Itoh, K.1
Sasai, M.2
-
10
-
-
84860170573
-
Stability of domain structures in multi-domain proteins
-
Bhaskara RM, Srinivasan N, (2011) Stability of domain structures in multi-domain proteins. Sci Rep 1: 40.
-
(2011)
Sci Rep
, vol.1
, pp. 40
-
-
Bhaskara, R.M.1
Srinivasan, N.2
-
11
-
-
0032502839
-
Contact order, transition state placement, and the refolding rates of single domain proteins
-
Plaxco KW, Simons KT, Baker D, (1998) Contact order, transition state placement, and the refolding rates of single domain proteins. J Mol Biol 277: 985–994.
-
(1998)
J Mol Biol
, vol.277
, pp. 985-994
-
-
Plaxco, K.W.1
Simons, K.T.2
Baker, D.3
-
12
-
-
84876077410
-
Understanding the folding-function tradeoff in proteins
-
Gosavi S, (2013) Understanding the folding-function tradeoff in proteins. PLoS One 8: e61222.
-
(2013)
PLoS One
, vol.8
, pp. e61222
-
-
Gosavi, S.1
-
13
-
-
79953905577
-
Classification and annotation of the relationship between protein structural change and ligand binding
-
Amemiya T, Koike R, Fuchigami S, Ikeguchi M, Kidera A, (2011) Classification and annotation of the relationship between protein structural change and ligand binding. J Mol Biol 408: 568–84.
-
(2011)
J Mol Biol
, vol.408
, pp. 568-584
-
-
Amemiya, T.1
Koike, R.2
Fuchigami, S.3
Ikeguchi, M.4
Kidera, A.5
-
14
-
-
0029644168
-
Adenylate kinase motions during catalysis: an energetic counterweight balancing substrate binding
-
Müller C, Schlauderer G, Reinstein J, Schulz G, (1996) Adenylate kinase motions during catalysis: an energetic counterweight balancing substrate binding. Structure 4: 147–156.
-
(1996)
Structure
, vol.4
, pp. 147-156
-
-
Müller, C.1
Schlauderer, G.2
Reinstein, J.3
Schulz, G.4
-
15
-
-
0028338283
-
The closed conformation of a highly flexible protein: the structure of E. coli adenylate kinase with bound AMP and AMPPNP
-
Berry MB, Meador B, BilderBack T, Liang P, Glaser P, et al. (1994) The closed conformation of a highly flexible protein: the structure of E. coli adenylate kinase with bound AMP and AMPPNP. Proteins 19: 183–98.
-
(1994)
Proteins
, vol.19
, pp. 183-198
-
-
Berry, M.B.1
Meador, B.2
BilderBack, T.3
Liang, P.4
Glaser, P.5
-
16
-
-
78650049311
-
Overlap between folding and functional energy landscapes for adenylate kinase conformational change
-
Olsson U, Wolf-Watz M, (2010) Overlap between folding and functional energy landscapes for adenylate kinase conformational change. Nat Commun 1: 111.
-
(2010)
Nat Commun
, vol.1
, pp. 111
-
-
Olsson, U.1
Wolf-Watz, M.2
-
17
-
-
33144487234
-
Roles of static and dynamic domains in stability and catalysis of adenylate kinase
-
Bae E, Phillips GN, (2006) Roles of static and dynamic domains in stability and catalysis of adenylate kinase. Proc Natl Acad Sci U S A 103: 2132–7.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 2132-2137
-
-
Bae, E.1
Phillips, G.N.2
-
18
-
-
33846847773
-
Conformational transitions of adenylate kinase: switching by cracking
-
Whitford PC, Miyashita O, Levy Y, Onuchic JN, (2007) Conformational transitions of adenylate kinase: switching by cracking. J Mol Biol 366: 1661–71.
-
(2007)
J Mol Biol
, vol.366
, pp. 1661-1671
-
-
Whitford, P.C.1
Miyashita, O.2
Levy, Y.3
Onuchic, J.N.4
-
19
-
-
38349092279
-
Conformational transitions in adenylate kinase. Allosteric communication reduces misligation
-
Whitford PC, Gosavi S, Onuchic JN, (2008) Conformational transitions in adenylate kinase. Allosteric communication reduces misligation. J Biol Chem 283: 2042–8.
-
(2008)
J Biol Chem
, vol.283
, pp. 2042-2048
-
-
Whitford, P.C.1
Gosavi, S.2
Onuchic, J.N.3
-
20
-
-
77954387071
-
Many local motions cooperate to produce the adenylate kinase conformational transition
-
Daily MD, Phillips GN, Cui Q, (2010) Many local motions cooperate to produce the adenylate kinase conformational transition. J Mol Biol 400: 618–31.
-
(2010)
J Mol Biol
, vol.400
, pp. 618-631
-
-
Daily, M.D.1
Phillips, G.N.2
Cui, Q.3
-
21
-
-
84867375354
-
Modulation of a pre-existing conformational equilibrium tunes adenylate kinase activity
-
Ådén J, Verma A, Schug A, Wolf-Watz M, (2012) Modulation of a pre-existing conformational equilibrium tunes adenylate kinase activity. J Am Chem Soc 134: 1–70.
-
(2012)
J Am Chem Soc
, vol.134
, pp. 1-70
-
-
Ådén, J.1
Verma, A.2
Schug, A.3
Wolf-Watz, M.4
-
22
-
-
84873683266
-
Structural topology and activation of an initial adenylate kinase-substrate complex
-
Ådén J, Weise CF, Brännström K, Olofsson A, Wolf-Watz M, (2013) Structural topology and activation of an initial adenylate kinase-substrate complex. Biochemistry 52: 1055–61.
-
(2013)
Biochemistry
, vol.52
, pp. 1055-1061
-
-
Ådén, J.1
Weise, C.F.2
Brännström, K.3
Olofsson, A.4
Wolf-Watz, M.5
-
23
-
-
70350131719
-
Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins
-
Schrank TP, Bolen DW, Hilser VJ, (2009) Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins. Proc Natl Acad Sci U S A 106: 16984–9.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 16984-16989
-
-
Schrank, T.P.1
Bolen, D.W.2
Hilser, V.J.3
-
24
-
-
0035807849
-
Protein folding pathways of adenylate kinase from E. coli: hydrostatic pressure and stopped-flow studies
-
Ruan Q, Ruan K, Balny C, Glaser M, Mantulin WW, (2001) Protein folding pathways of adenylate kinase from E. coli: hydrostatic pressure and stopped-flow studies. Biochemistry 40: 14706–14.
-
(2001)
Biochemistry
, vol.40
, pp. 14706-14714
-
-
Ruan, Q.1
Ruan, K.2
Balny, C.3
Glaser, M.4
Mantulin, W.W.5
-
25
-
-
20644438446
-
Protein folding and function: the N-terminal fragment in adenylate kinase
-
Kumar S, Sham YY, Tsai CJ, Nussinov R, (2001) Protein folding and function: the N-terminal fragment in adenylate kinase. Biophys J 80: 2439–54.
-
(2001)
Biophys J
, vol.80
, pp. 2439-2454
-
-
Kumar, S.1
Sham, Y.Y.2
Tsai, C.J.3
Nussinov, R.4
-
26
-
-
58149396567
-
Early closure of a long loop in the refolding of adenylate kinase: a possible key role of non-local interactions in the initial folding steps
-
Orevi T, Ben Ishay E, Pirchi M, Jacob MH, Amir D, et al. (2009) Early closure of a long loop in the refolding of adenylate kinase: a possible key role of non-local interactions in the initial folding steps. J Mol Biol 385: 1230–42.
-
(2009)
J Mol Biol
, vol.385
, pp. 1230-1242
-
-
Orevi, T.1
Ben Ishay, E.2
Pirchi, M.3
Jacob, M.H.4
Amir, D.5
-
27
-
-
84867258888
-
Fast subdomain folding prior to the global refolding transition of E. coli adenylate kinase: a double kinetics study
-
Ben Ishay E, Rahamim G, Orevi T, Hazan G, Amir D, et al. (2012) Fast subdomain folding prior to the global refolding transition of E. coli adenylate kinase: a double kinetics study. J Mol Biol 423: 613–23.
-
(2012)
J Mol Biol
, vol.423
, pp. 613-623
-
-
Ben Ishay, E.1
Rahamim, G.2
Orevi, T.3
Hazan, G.4
Amir, D.5
-
28
-
-
24044490917
-
Fast collapse but slow formation of secondary structure elements in the refolding transition of E. coli adenylate kinase
-
Ratner V, Amir D, Kahana E, Haas E, (2005) Fast collapse but slow formation of secondary structure elements in the refolding transition of E. coli adenylate kinase. J Mol Biol 352: 683–99.
-
(2005)
J Mol Biol
, vol.352
, pp. 683-699
-
-
Ratner, V.1
Amir, D.2
Kahana, E.3
Haas, E.4
-
29
-
-
0034705335
-
Determination of intramolecular distance distribution during protein folding on the millisecond timescale
-
Ratner V, Sinev M, Haas E, (2000) Determination of intramolecular distance distribution during protein folding on the millisecond timescale. J Mol Biol 299: 1363–71.
-
(2000)
J Mol Biol
, vol.299
, pp. 1363-1371
-
-
Ratner, V.1
Sinev, M.2
Haas, E.3
-
30
-
-
0036071848
-
The natively helical chain segment 169–188 of Escherichia coli adenylate kinase is formed in the latest phase of the refolding transition
-
Ratner V, Kahana E, Haas E, (2002) The natively helical chain segment 169–188 of Escherichia coli adenylate kinase is formed in the latest phase of the refolding transition. J Mol Biol 320: 1135–45.
-
(2002)
J Mol Biol
, vol.320
, pp. 1135-1145
-
-
Ratner, V.1
Kahana, E.2
Haas, E.3
-
31
-
-
64549108040
-
Noncooperative folding of subdomains in adenylate kinase
-
Rundqvist L, Ådén J, Sparrman T, Wallgren M, Olsson U, et al. (2009) Noncooperative folding of subdomains in adenylate kinase. Biochemistry 48: 1911–27.
-
(2009)
Biochemistry
, vol.48
, pp. 1911-1927
-
-
Rundqvist, L.1
Ådén, J.2
Sparrman, T.3
Wallgren, M.4
Olsson, U.5
-
32
-
-
84868107440
-
Energy landscape and multiroute folding of topologically complex proteins adenylate kinase and 2ouf-knot
-
Li W, Terakawa T, Wang W, Takada S, (2012) Energy landscape and multiroute folding of topologically complex proteins adenylate kinase and 2ouf-knot. Proc Natl Acad Sci U S A 109: 17789–94.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 17789-17794
-
-
Li, W.1
Terakawa, T.2
Wang, W.3
Takada, S.4
-
33
-
-
0034581317
-
The energy landscape theory of protein folding: insights into folding mechanisms and scenarios
-
Onuchic JN, Nymeyer H, García AE, Chahine J, Socci ND, (2000) The energy landscape theory of protein folding: insights into folding mechanisms and scenarios. Advances in protein chemistry 53: 87–152.
-
(2000)
Advances in protein chemistry
, vol.53
, pp. 87-152
-
-
Onuchic, J.N.1
Nymeyer, H.2
García, A.E.3
Chahine, J.4
Socci, N.D.5
-
34
-
-
0034685604
-
Topological and energetic factors: what determines the structural details of the transition state ensemble and “en-route” intermediates for protein folding? An investigation for small globular proteins
-
Clementi C, Nymeyer H, Onuchic JN, (2000) Topological and energetic factors: what determines the structural details of the transition state ensemble and “en-route” intermediates for protein folding? An investigation for small globular proteins. J Mol Biol 298: 937–53.
-
(2000)
J Mol Biol
, vol.298
, pp. 937-953
-
-
Clementi, C.1
Nymeyer, H.2
Onuchic, J.N.3
-
35
-
-
33744829290
-
Common motifs and topological effects in the protein folding transition state
-
Hubner IA, Lindberg M, Haglund E, Oliveberg M, Shakhnovich EI, (2006) Common motifs and topological effects in the protein folding transition state. J Mol Biol 359: 1075–85.
-
(2006)
J Mol Biol
, vol.359
, pp. 1075-1085
-
-
Hubner, I.A.1
Lindberg, M.2
Haglund, E.3
Oliveberg, M.4
Shakhnovich, E.I.5
-
36
-
-
84887801032
-
Modulation of a protein free-energy landscape by circular permutation
-
Radou G, Enciso M, Krivov S, Paci E, (2013) Modulation of a protein free-energy landscape by circular permutation. J Phys Chem B 117: 13743–7.
-
(2013)
J Phys Chem B
, vol.117
, pp. 13743-13747
-
-
Radou, G.1
Enciso, M.2
Krivov, S.3
Paci, E.4
-
37
-
-
60149098644
-
Consequences of domain insertion on the stability and folding mechanism of a protein
-
Zoldák G, Carstensen L, Scholz C, Schmid FX, (2009) Consequences of domain insertion on the stability and folding mechanism of a protein. J Mol Biol 386: 1138–52.
-
(2009)
J Mol Biol
, vol.386
, pp. 1138-1152
-
-
Zoldák, G.1
Carstensen, L.2
Scholz, C.3
Schmid, F.X.4
-
38
-
-
77953231020
-
The folding cooperativity of a protein is controlled by its chain topology
-
Shank EA, Cecconi C, Dill JW, Marqusee S, Bustamante C, (2010) The folding cooperativity of a protein is controlled by its chain topology. Nature 465: 637–40.
-
(2010)
Nature
, vol.465
, pp. 637-640
-
-
Shank, E.A.1
Cecconi, C.2
Dill, J.W.3
Marqusee, S.4
Bustamante, C.5
-
39
-
-
84891782659
-
Pfam: the protein families database
-
Finn RD, Bateman A, Clements J, Coggill P, Eberhardt RY, et al. (2014) Pfam: the protein families database. Nucleic Acids Res 42: D222–D230.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D222-D230
-
-
Finn, R.D.1
Bateman, A.2
Clements, J.3
Coggill, P.4
Eberhardt, R.Y.5
-
40
-
-
84906080324
-
General mechanism of two-state protein folding kinetics
-
Rollins GC, Dill KA, (2014) General mechanism of two-state protein folding kinetics,. J Am Chem Soc 136: 11420–11427.
-
(2014)
J Am Chem Soc
, vol.136
, pp. 11420-11427
-
-
Rollins, G.C.1
Dill, K.A.2
-
41
-
-
67649774570
-
Computing protein stabilities from their chain lengths
-
Ghosh K, Dill KA, (2009) Computing protein stabilities from their chain lengths. Proc Natl Acad Sci U S A 106: 10649–54.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 10649-10654
-
-
Ghosh, K.1
Dill, K.A.2
-
42
-
-
3142782241
-
Quantifying the roughness on the free energy landscape: entropic bottlenecks and protein folding rates
-
Chavez LL, Onuchic JN, Clementi C, (2004) Quantifying the roughness on the free energy landscape: entropic bottlenecks and protein folding rates. J Am Chem Soc 126: 8426–32.
-
(2004)
J Am Chem Soc
, vol.126
, pp. 8426-832.
-
-
Chavez, L.L.1
Onuchic, J.N.2
Clementi, C.3
-
44
-
-
24644472817
-
Physics and evolution of thermophilic adaptation
-
Berezovsky IN, Shakhnovich EI, (2005) Physics and evolution of thermophilic adaptation. Proc Natl Acad Sci USA 102: 12742–12747.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 12742-12747.
-
-
Berezovsky, I.N.1
Shakhnovich, E.I.2
-
45
-
-
84877000340
-
N-terminal domains in two-domain proteins are biased to be shorter and predicted to fold faster than their C-terminal counterparts
-
Jacob E, Unger R, Horovitz A, (2013) N-terminal domains in two-domain proteins are biased to be shorter and predicted to fold faster than their C-terminal counterparts. Cell Rep 3: 1051–6.
-
(2013)
Cell Rep
, vol.3
, pp. 1051-1056
-
-
Jacob, E.1
Unger, R.2
Horovitz, A.3
-
46
-
-
3042735586
-
Placing single-molecule T4 lysozyme enzymes on a bacterial cell surface: toward probing single-molecule enzymatic reaction in living cells
-
Hu D, Lu HP, (2004) Placing single-molecule T4 lysozyme enzymes on a bacterial cell surface: toward probing single-molecule enzymatic reaction in living cells. Biophys J 87: 656–61.
-
(2004)
Biophys J
, vol.87
, pp. 656-661
-
-
Hu, D.1
Lu, H.P.2
-
47
-
-
0034255123
-
Speeding molecular recognition by using the folding funnel: the fly-casting mechanism
-
Shoemaker BA, Portman JJ, Wolynes PG, (2000) Speeding molecular recognition by using the folding funnel: the fly-casting mechanism. Proc Natl Acad Sci U S A 97: 8868–73.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 8868-8873
-
-
Shoemaker, B.A.1
Portman, J.J.2
Wolynes, P.G.3
-
48
-
-
33846088140
-
FireDB-a database of functionally important residues from proteins of known structure
-
Lopez G, Valencia A, Tress M, (2006) FireDB-a database of functionally important residues from proteins of known structure. Nucleic Acids Res 35: D219–D223.
-
(2006)
Nucleic Acids Res
, vol.35
, pp. D219-D223
-
-
Lopez, G.1
Valencia, A.2
Tress, M.3
-
50
-
-
84883419423
-
Consequences of domain insertion on sequence-structure divergence in a superfold
-
Pandya C, Brown S, Pieper U, Sali A, Dunaway-Mariano D, et al. (2013) Consequences of domain insertion on sequence-structure divergence in a superfold. Proc Natl Acad Sci U S A 110: 3381–7.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 3381-3387
-
-
Pandya, C.1
Brown, S.2
Pieper, U.3
Sali, A.4
Dunaway-Mariano, D.5
-
51
-
-
84862526773
-
Protein conformational switches: from nature to design
-
Ha J-H, Loh SN, (2012) Protein conformational switches: from nature to design. Chemistry 18: 7984–99.
-
(2012)
Chemistry
, vol.18
, pp. 7984-7999
-
-
Ha, J.-H.1
Loh, S.N.2
-
52
-
-
0034623013
-
Conversion of two-state to multi-state folding kinetics on fusion of two protein foldons
-
Inaba K, Kobayashi N, Fersht AR, (2000) Conversion of two-state to multi-state folding kinetics on fusion of two protein foldons. J Mol Biol 302: 219–33.
-
(2000)
J Mol Biol
, vol.302
, pp. 219-233
-
-
Inaba, K.1
Kobayashi, N.2
Fersht, A.R.3
-
53
-
-
84868198303
-
Folding of multidomain proteins: biophysical consequences of tethering even in apparently independent folding
-
Arviv O, Levy Y, (2012) Folding of multidomain proteins: biophysical consequences of tethering even in apparently independent folding. Proteins 80: 2780–98.
-
(2012)
Proteins
, vol.80
, pp. 2780-2798
-
-
Arviv, O.1
Levy, Y.2
-
54
-
-
13044272912
-
Automated analysis of interatomic contacts in proteins
-
Sobolev V, Sorokine A, Prilusky J, Abola EE, Edelman M, (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics 15: 327–332.
-
(1999)
Bioinformatics
, vol.15
, pp. 327-332
-
-
Sobolev, V.1
Sorokine, A.2
Prilusky, J.3
Abola, E.E.4
Edelman, M.5
-
55
-
-
0033810049
-
Modeling of loops in protein structures
-
Fiser A, Do RK, Sali A, (2000) Modeling of loops in protein structures. Protein Sci 9: 1753–73.
-
(2000)
Protein Sci
, vol.9
, pp. 1753-1773
-
-
Fiser, A.1
Do, R.K.2
Sali, A.3
-
56
-
-
46249092554
-
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
-
Hess B, Kutzner C, van der Spoel D, Lindahl E, (2008) GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation. J Chem Theory Comput 4: 435–447.
-
(2008)
J Chem Theory Comput
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
van der Spoel, D.3
Lindahl, E.4
-
57
-
-
84912119435
-
-
Bonomi M, Branduardi D, Bussi G, Camilloni C, Provasi D, et al. (2011) PLUMED user's guide version 1.3.0
-
Bonomi M, Branduardi D, Bussi G, Camilloni C, Provasi D, et al. (2011) PLUMED user's guide version 1.3.0 Available: http://www.plumed-code.org/documentation/manual_1-3-0.pdf?attredirects=0
-
-
-
|