Roles of static and dynamic domains in stability and catalysis of adenylate kinase

Proceedings of the National Academy of Sciences of the United States of America

Volumn 103, Issue 7, 2006, Pages 2132-2137

  Bae, Euiyoung ^a   Phillips Jr , George N ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

Chimeric protein; Protein flexibility; Thermostability

Indexed keywords

ADENYLATE KINASE; CHIMERIC PROTEIN; SYNTHETIC DNA;

ALLOSTERISM; ARTICLE; BACILLUS SUBTILIS; CATALYSIS; CATALYST; CONFORMATIONAL TRANSITION; DYNAMICS; ENZYME ACTIVITY; ENZYME STABILITY; GEOBACILLUS STEAROTHERMOPHILUS; MOTION; MUTAGENESIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN STABILITY; THERMOSTABILITY;

ADENYLATE KINASE; AMINO ACID SEQUENCE; BACILLUS STEAROTHERMOPHILUS; BACILLUS SUBTILIS; BACTERIAL PROTEINS; CATALYSIS; ENZYME STABILITY; MOLECULAR SEQUENCE DATA; MUTANT CHIMERIC PROTEINS; PROTEIN STRUCTURE, TERTIARY; STRUCTURE-ACTIVITY RELATIONSHIP; TEMPERATURE;

BACILLUS SUBTILIS; GEOBACILLUS STEAROTHERMOPHILUS;

EID: 33144487234     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0507527103     Document Type: Article

References (28)

1. Schotte, F., Lim, M., Jackson, T. A., Smirnov, A. V., Soman, J., Olson, J. S., Phillips, G. N., Jr., Wulff, M. & Anfinrud, P. A. (2003) Science 300, 1944-1947.
2. Eisenmesser, E. Z., Bosco, D. A., Akke, M. & Kern, D. (2002) Science 295, 1520-1523.
3. Volkman, B. F., Lipson, D., Wemmer, D. E. & Kern, D. (2001) Science 291, 2429-2433.
4. Ota, N. & Agard, D. A. (2001) Protein Sci. 10, 1403-1414.
5. Miller, D. W. & Agard, D. A. (1999) J. Mol. Biol. 286, 267-278.
6. Balabin, I. A. & Onuchic, J. N. (2000) Science 290, 114-117.
7. Noda, L. (1973) in The Enzymes, ed. Boyer, P. D. (Academic, New York), Vol. 8, pp. 279-305.
8. Vonrhein, C., Schlauderer, G. & Schulz, G. E. (1995) Structure (London) 3, 483-490.
9. Müller, C. W., Schlauderer, G. J., Reinstein, J. & Schulz, G. E. (1996) Structure (London) 4, 147-156.
10. Schulz, G. E., Müller, C. W. & Diederichs, K. (1990) J. Mol. Biol. 213, 627-630.
11. Wolf-Watz, M., Thai, V., Henzler-Wildman, K., Hadjipavlou, G., Eisenmesser, E. Z. & Kern, D. (2004) Nat. Struct. Mol. Biol. 11, 945-949.
12. Miyashita, O., Onuchic, J. N. & Wolynes, P. G. (2003) Proc. Natl. Acad. Sci. USA 100, 12570-12575.
13. Zhang, H. J., Sheng, X. R., Pan, X. M. & Zhou, J. M. (1997) Biochem. Biophys. Res. Commun. 238, 382-386.
14. Shapiro, Y. E., Kahana, E., Tugarinov, V., Liang, Z., Freed, J. H. & Meirovitch, E. (2002) Biochemistry 41, 6271-6281.
15. Závodszky, P., Kardos, J., Svingor, Á. & Petsko, G. A. (1998) Proc. Natl. Acad. Sci. USA 95, 7406-7411.
16. Butterwick, J. A., Patrick Loria, J., Astrof, N. S., Kroenke, C. D., Cole, R., Rance, M. & Palmer, A. G., III (2004) J. Mol. Biol. 339, 855-871.
17. Liang, Z. X., Tsigos, I., Lee, T., Bouriotis, V., Resing, K. A., Ahn, N. G. & Klinman, J. P. (2004) Biochemistry 43, 14676-14683.
18. Bae, E. & Phillips, G. N., Jr. (2004) J. Biol. Chem. 279, 28202-28208.
19. Haney, P. J., Stees, M. & Konisky, J. (1999) J. Biol. Chem. 274, 28453-28458.
20. Perrier, V., Surewicz, W. K., Glaser, P., Martineau, L., Craescu, C. T., Fabian, H., Mantsch, H. H., Barzu, O. & Gilles, A. M. (1994) Biochemistry 33, 9960-9967.
21. Glaser, P., Presecan, E., Delepierre, M., Surewicz, W. K., Mantsch, H. H., Barzu, O. & Gilles, A. M. (1992) Biochemistry 31, 3038-3043.
22. Hayward, S. (2004) J. Mol. Biol. 339, 1001-1021.
23. Yon, J. & Fried, M. (1989) Nucleic Acids Res. 17, 4895.
24. Stemmer, W. P. (1994) Nature 370, 389-391.
25. Perrier, V., Burlacu-Miron, S., Bourgeois, S., Surewicz, W. K. & Gilles, A.-M. (1998) J. Biol. Chem. 273, 19097-19101.
26. Bae, E. & Phillips, G. N., Jr. (2005) J. Biol. Chem. 280, 30943-30948.
27. Somero, G. N. (1978) Annu. Rev. Ecol. Syst. 9, 1-29.
28. D'Amico, S., Claverie, P., Collins, T., Georlette, D., Gratia, E., Hoyoux, A., Meuwis, M. A., Feller, G. & Gerday, C. (2002) Philos. Trans. R. Soc. London Ser. B 357, 917-925.