-
1
-
-
0034069495
-
Gene Ontology: tool for the unification of biology
-
The Gene Ontology Consortium
-
Ashburner M., Ball C.A., Blake J.A., Botstein D., Butler H., Cherry J.M., Davis A.P., Dolinski K., Dwight S.S., Eppig J.T., et al. Gene Ontology: tool for the unification of biology. Nat. Genet. 2000, 25:25-29. The Gene Ontology Consortium.
-
(2000)
Nat. Genet.
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
-
2
-
-
33744795211
-
Hepatocyte nuclear factor 4alpha orchestrates expression of cell adhesion proteins during the epithelial transformation of the developing liver
-
Battle M.A., Konopka G., Parviz F., Gaggl A.L., Yang C., Sladek F.M., Duncan S.A. Hepatocyte nuclear factor 4alpha orchestrates expression of cell adhesion proteins during the epithelial transformation of the developing liver. Proc. Natl. Acad. Sci. USA 2006, 103:8419-8424.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 8419-8424
-
-
Battle, M.A.1
Konopka, G.2
Parviz, F.3
Gaggl, A.L.4
Yang, C.5
Sladek, F.M.6
Duncan, S.A.7
-
3
-
-
75949108066
-
Galaxy: a web-based genome analysis tool for experimentalists
-
Unit 19.10.1-2
-
Blankenberg D., Von Kuster G., Coraor N., Ananda G., Lazarus R., Mangan M., Nekrutenko A., Taylor J. Galaxy: a web-based genome analysis tool for experimentalists. Curr. Protoc. Mol. Biol. 2010, Chapter 19. Unit 19.10.1-2.
-
(2010)
Curr. Protoc. Mol. Biol.
, vol.Chapter 19
-
-
Blankenberg, D.1
Von Kuster, G.2
Coraor, N.3
Ananda, G.4
Lazarus, R.5
Mangan, M.6
Nekrutenko, A.7
Taylor, J.8
-
4
-
-
67650224461
-
Foxa2-dependent hepatic gene regulatory networks depend on physiological state
-
Bochkis I.M., Schug J., Rubins N.E., Chopra A.R., O'Malley B.W., Kaestner K.H. Foxa2-dependent hepatic gene regulatory networks depend on physiological state. Physiol. Genomics 2009, 38:186-195.
-
(2009)
Physiol. Genomics
, vol.38
, pp. 186-195
-
-
Bochkis, I.M.1
Schug, J.2
Rubins, N.E.3
Chopra, A.R.4
O'Malley, B.W.5
Kaestner, K.H.6
-
5
-
-
84902184462
-
Reorganization of enhancer patterns in transition from naive to primed pluripotency
-
Buecker C., Srinivasan R., Wu Z., Calo E., Acampora D., Faial T., Simeone A., Tan M., Swigut T., Wysocka J. Reorganization of enhancer patterns in transition from naive to primed pluripotency. Cell Stem Cell 2014, 14:838-853.
-
(2014)
Cell Stem Cell
, vol.14
, pp. 838-853
-
-
Buecker, C.1
Srinivasan, R.2
Wu, Z.3
Calo, E.4
Acampora, D.5
Faial, T.6
Simeone, A.7
Tan, M.8
Swigut, T.9
Wysocka, J.10
-
6
-
-
36549074631
-
YAP1 increases organ size and expands undifferentiated progenitor cells
-
Camargo F.D., Gokhale S., Johnnidis J.B., Fu D., Bell G.W., Jaenisch R., Brummelkamp T.R. YAP1 increases organ size and expands undifferentiated progenitor cells. Curr. Biol. 2007, 17:2054-2060.
-
(2007)
Curr. Biol.
, vol.17
, pp. 2054-2060
-
-
Camargo, F.D.1
Gokhale, S.2
Johnnidis, J.B.3
Fu, D.4
Bell, G.W.5
Jaenisch, R.6
Brummelkamp, T.R.7
-
7
-
-
34548636132
-
Elucidation of a universal size-control mechanism in Drosophila and mammals
-
Dong J., Feldmann G., Huang J., Wu S., Zhang N., Comerford S.A., Gayyed M.F., Anders R.A., Maitra A., Pan D. Elucidation of a universal size-control mechanism in Drosophila and mammals. Cell 2007, 130:1120-1133.
-
(2007)
Cell
, vol.130
, pp. 1120-1133
-
-
Dong, J.1
Feldmann, G.2
Huang, J.3
Wu, S.4
Zhang, N.5
Comerford, S.A.6
Gayyed, M.F.7
Anders, R.A.8
Maitra, A.9
Pan, D.10
-
8
-
-
84896132644
-
Human hepatocytes with drug metabolic function induced fromfibroblasts by lineage reprogramming
-
Du Y., Wang J., Jia J., Song N., Xiang C., Xu J., Hou Z., Su X., Liu B., Jiang T., et al. Human hepatocytes with drug metabolic function induced fromfibroblasts by lineage reprogramming. Cell Stem Cell 2014, 14:394-403.
-
(2014)
Cell Stem Cell
, vol.14
, pp. 394-403
-
-
Du, Y.1
Wang, J.2
Jia, J.3
Song, N.4
Xiang, C.5
Xu, J.6
Hou, Z.7
Su, X.8
Liu, B.9
Jiang, T.10
-
9
-
-
0031054568
-
Murine gastrulation requires HNF-4 regulated gene expression in the visceral endoderm: tetraploid rescue of Hnf-4(-/-) embryos
-
Duncan S.A., Nagy A., Chan W. Murine gastrulation requires HNF-4 regulated gene expression in the visceral endoderm: tetraploid rescue of Hnf-4(-/-) embryos. Development 1997, 124:279-287.
-
(1997)
Development
, vol.124
, pp. 279-287
-
-
Duncan, S.A.1
Nagy, A.2
Chan, W.3
-
10
-
-
60849139395
-
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
-
Eden E., Navon R., Steinfeld I., Lipson D., Yakhini Z. GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists. BMC Bioinformatics 2009, 10:48.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 48
-
-
Eden, E.1
Navon, R.2
Steinfeld, I.3
Lipson, D.4
Yakhini, Z.5
-
11
-
-
48249140621
-
FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology
-
Fejes A.P., Robertson G., Bilenky M., Varhol R., Bainbridge M., Jones S.J. FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology. Bioinformatics 2008, 24:1729-1730.
-
(2008)
Bioinformatics
, vol.24
, pp. 1729-1730
-
-
Fejes, A.P.1
Robertson, G.2
Bilenky, M.3
Varhol, R.4
Bainbridge, M.5
Jones, S.J.6
-
12
-
-
0023840590
-
Fine-structure mapping of the three mouse alpha-fetoprotein gene enhancers
-
Godbout R., Ingram R.S., Tilghman S.M. Fine-structure mapping of the three mouse alpha-fetoprotein gene enhancers. Mol. Cell. Biol. 1988, 8:1169-1178.
-
(1988)
Mol. Cell. Biol.
, vol.8
, pp. 1169-1178
-
-
Godbout, R.1
Ingram, R.S.2
Tilghman, S.M.3
-
13
-
-
77955801615
-
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
-
Galaxy Team
-
Goecks J., Nekrutenko A., Taylor J. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol. 2010, 11:R86. Galaxy Team.
-
(2010)
Genome Biol.
, vol.11
, pp. R86
-
-
Goecks, J.1
Nekrutenko, A.2
Taylor, J.3
-
14
-
-
77957663917
-
Alternative expression analysis by RNA sequencing
-
Griffith M., Griffith O.L., Mwenifumbo J., Goya R., Morrissy A.S., Morin R.D., Corbett R., Tang M.J., Hou Y.C., Pugh T.J., et al. Alternative expression analysis by RNA sequencing. Nat. Methods 2010, 7:843-847.
-
(2010)
Nat. Methods
, vol.7
, pp. 843-847
-
-
Griffith, M.1
Griffith, O.L.2
Mwenifumbo, J.3
Goya, R.4
Morrissy, A.S.5
Morin, R.D.6
Corbett, R.7
Tang, M.J.8
Hou, Y.C.9
Pugh, T.J.10
-
15
-
-
33751222537
-
The oncofetal protein glypican-3 is a novel marker of hepatic progenitor/oval cells
-
Grozdanov P.N., Yovchev M.I., Dabeva M.D. The oncofetal protein glypican-3 is a novel marker of hepatic progenitor/oval cells. Lab. Invest. 2006, 86:1272-1284.
-
(2006)
Lab. Invest.
, vol.86
, pp. 1272-1284
-
-
Grozdanov, P.N.1
Yovchev, M.I.2
Dabeva, M.D.3
-
16
-
-
0035141324
-
Hepatocyte nuclear factor 4alpha (nuclear receptor 2A1) is essential for maintenance of hepatic gene expression and lipid homeostasis
-
Hayhurst G.P., Lee Y.H., Lambert G., Ward J.M., Gonzalez F.J. Hepatocyte nuclear factor 4alpha (nuclear receptor 2A1) is essential for maintenance of hepatic gene expression and lipid homeostasis. Mol. Cell. Biol. 2001, 21:1393-1403.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 1393-1403
-
-
Hayhurst, G.P.1
Lee, Y.H.2
Lambert, G.3
Ward, J.M.4
Gonzalez, F.J.5
-
17
-
-
77950262538
-
Nucleosome dynamics define transcriptional enhancers
-
He H.H., Meyer C.A., Shin H., Bailey S.T., Wei G., Wang Q., Zhang Y., Xu K., Ni M., Lupien M., et al. Nucleosome dynamics define transcriptional enhancers. Nat. Genet. 2010, 42:343-347.
-
(2010)
Nat. Genet.
, vol.42
, pp. 343-347
-
-
He, H.H.1
Meyer, C.A.2
Shin, H.3
Bailey, S.T.4
Wei, G.5
Wang, Q.6
Zhang, Y.7
Xu, K.8
Ni, M.9
Lupien, M.10
-
18
-
-
79955405757
-
Hippo pathway inhibits Wnt signaling to restrain cardiomyocyte proliferation and heart size
-
Heallen T., Zhang M., Wang J., Bonilla-Claudio M., Klysik E., Johnson R.L., Martin J.F. Hippo pathway inhibits Wnt signaling to restrain cardiomyocyte proliferation and heart size. Science 2011, 332:458-461.
-
(2011)
Science
, vol.332
, pp. 458-461
-
-
Heallen, T.1
Zhang, M.2
Wang, J.3
Bonilla-Claudio, M.4
Klysik, E.5
Johnson, R.L.6
Martin, J.F.7
-
19
-
-
77955149398
-
Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver
-
Hoffman B.G., Robertson G., Zavaglia B., Beach M., Cullum R., Lee S., Soukhatcheva G., Li L., Wederell E.D., Thiessen N., et al. Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver. Genome Res. 2010, 20:1037-1051.
-
(2010)
Genome Res.
, vol.20
, pp. 1037-1051
-
-
Hoffman, B.G.1
Robertson, G.2
Zavaglia, B.3
Beach, M.4
Cullum, R.5
Lee, S.6
Soukhatcheva, G.7
Li, L.8
Wederell, E.D.9
Thiessen, N.10
-
20
-
-
0042847434
-
AMP-activated protein kinase regulates HNF4alpha transcriptional activity by inhibiting dimer formation and decreasing protein stability
-
Hong Y.H., Varanasi U.S., Yang W., Leff T. AMP-activated protein kinase regulates HNF4alpha transcriptional activity by inhibiting dimer formation and decreasing protein stability. J.Biol. Chem. 2003, 278:27495-27501.
-
(2003)
J.Biol. Chem.
, vol.278
, pp. 27495-27501
-
-
Hong, Y.H.1
Varanasi, U.S.2
Yang, W.3
Leff, T.4
-
21
-
-
79960637387
-
Induction of functional hepatocyte-like cells from mouse fibroblasts bydefined factors
-
Huang P., He Z., Ji S., Sun H., Xiang D., Liu C., Hu Y., Wang X., Hui L. Induction of functional hepatocyte-like cells from mouse fibroblasts bydefined factors. Nature 2011, 475:386-389.
-
(2011)
Nature
, vol.475
, pp. 386-389
-
-
Huang, P.1
He, Z.2
Ji, S.3
Sun, H.4
Xiang, D.5
Liu, C.6
Hu, Y.7
Wang, X.8
Hui, L.9
-
22
-
-
84896142695
-
Direct reprogramming of human fibroblasts to functional and expandable hepatocytes
-
Huang P., Zhang L., Gao Y., He Z., Yao D., Wu Z., Cen J., Chen X., Liu C., Hu Y., et al. Direct reprogramming of human fibroblasts to functional and expandable hepatocytes. Cell Stem Cell 2014, 14:370-384.
-
(2014)
Cell Stem Cell
, vol.14
, pp. 370-384
-
-
Huang, P.1
Zhang, L.2
Gao, Y.3
He, Z.4
Yao, D.5
Wu, Z.6
Cen, J.7
Chen, X.8
Liu, C.9
Hu, Y.10
-
23
-
-
33747370376
-
Plasticity and expanding complexity of the hepatic transcription factor network during liver development
-
Kyrmizi I., Hatzis P., Katrakili N., Tronche F., Gonzalez F.J., Talianidis I. Plasticity and expanding complexity of the hepatic transcription factor network during liver development. Genes Dev. 2006, 20:2293-2305.
-
(2006)
Genes Dev.
, vol.20
, pp. 2293-2305
-
-
Kyrmizi, I.1
Hatzis, P.2
Katrakili, N.3
Tronche, F.4
Gonzalez, F.J.5
Talianidis, I.6
-
24
-
-
0032110463
-
Smad2 and Smad3 positively and negatively regulate TGF beta-dependent transcription through the forkhead DNA-binding protein FAST2
-
Labbé E., Silvestri C., Hoodless P.A., Wrana J.L., Attisano L. Smad2 and Smad3 positively and negatively regulate TGF beta-dependent transcription through the forkhead DNA-binding protein FAST2. Mol. Cell 1998, 2:109-120.
-
(1998)
Mol. Cell
, vol.2
, pp. 109-120
-
-
Labbé, E.1
Silvestri, C.2
Hoodless, P.A.3
Wrana, J.L.4
Attisano, L.5
-
25
-
-
20544473735
-
The initiation of liver development is dependent on Foxa transcription factors
-
Lee C.S., Friedman J.R., Fulmer J.T., Kaestner K.H. The initiation of liver development is dependent on Foxa transcription factors. Nature 2005, 435:944-947.
-
(2005)
Nature
, vol.435
, pp. 944-947
-
-
Lee, C.S.1
Friedman, J.R.2
Fulmer, J.T.3
Kaestner, K.H.4
-
26
-
-
84862909192
-
Foxa1 and Foxa2 are essential for sexual dimorphism in liver cancer
-
Li Z., Tuteja G., Schug J., Kaestner K.H. Foxa1 and Foxa2 are essential for sexual dimorphism in liver cancer. Cell 2012, 148:72-83.
-
(2012)
Cell
, vol.148
, pp. 72-83
-
-
Li, Z.1
Tuteja, G.2
Schug, J.3
Kaestner, K.H.4
-
27
-
-
40849085514
-
FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription
-
Lupien M., Eeckhoute J., Meyer C.A., Wang Q., Zhang Y., Li W., Carroll J.S., Liu X.S., Brown M. FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription. Cell 2008, 132:958-970.
-
(2008)
Cell
, vol.132
, pp. 958-970
-
-
Lupien, M.1
Eeckhoute, J.2
Meyer, C.A.3
Wang, Q.4
Zhang, Y.5
Li, W.6
Carroll, J.S.7
Liu, X.S.8
Brown, M.9
-
28
-
-
60449093350
-
Sall4 regulates cell fate decision in fetal hepatic stem/progenitor cells
-
Oikawa T., Kamiya A., Kakinuma S., Zeniya M., Nishinakamura R., Tajiri H., Nakauchi H. Sall4 regulates cell fate decision in fetal hepatic stem/progenitor cells. Gastroenterology 2009, 136:1000-1011.
-
(2009)
Gastroenterology
, vol.136
, pp. 1000-1011
-
-
Oikawa, T.1
Kamiya, A.2
Kakinuma, S.3
Zeniya, M.4
Nishinakamura, R.5
Tajiri, H.6
Nakauchi, H.7
-
29
-
-
79952901680
-
Enhancer function: new insights into the regulation of tissue-specific gene expression
-
Ong C.T., Corces V.G. Enhancer function: new insights into the regulation of tissue-specific gene expression. Nat. Rev. Genet. 2011, 12:283-293.
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 283-293
-
-
Ong, C.T.1
Corces, V.G.2
-
30
-
-
0038757830
-
Hepatocyte nuclear factor 4alpha controls the development of a hepatic epithelium and liver morphogenesis
-
Parviz F., Matullo C., Garrison W.D., Savatski L., Adamson J.W., Ning G., Kaestner K.H., Rossi J.M., Zaret K.S., Duncan S.A. Hepatocyte nuclear factor 4alpha controls the development of a hepatic epithelium and liver morphogenesis. Nat. Genet. 2003, 34:292-296.
-
(2003)
Nat. Genet.
, vol.34
, pp. 292-296
-
-
Parviz, F.1
Matullo, C.2
Garrison, W.D.3
Savatski, L.4
Adamson, J.W.5
Ning, G.6
Kaestner, K.H.7
Rossi, J.M.8
Zaret, K.S.9
Duncan, S.A.10
-
31
-
-
79951516056
-
A unique chromatin signature uncovers early developmental enhancers in humans
-
Rada-Iglesias A., Bajpai R., Swigut T., Brugmann S.A., Flynn R.A., Wysocka J. A unique chromatin signature uncovers early developmental enhancers in humans. Nature 2011, 470:279-283.
-
(2011)
Nature
, vol.470
, pp. 279-283
-
-
Rada-Iglesias, A.1
Bajpai, R.2
Swigut, T.3
Brugmann, S.A.4
Flynn, R.A.5
Wysocka, J.6
-
32
-
-
84886770300
-
The road to regenerative liver therapies: the triumphs, trials and tribulations
-
Raju R., Chau D., Verfaillie C.M., Hu W.S. The road to regenerative liver therapies: the triumphs, trials and tribulations. Biotechnol. Adv. 2013, 31:1085-1093.
-
(2013)
Biotechnol. Adv.
, vol.31
, pp. 1085-1093
-
-
Raju, R.1
Chau, D.2
Verfaillie, C.M.3
Hu, W.S.4
-
33
-
-
34547633677
-
Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing
-
Robertson G., Hirst M., Bainbridge M., Bilenky M., Zhao Y., Zeng T., Euskirchen G., Bernier B., Varhol R., Delaney A., et al. Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing. Nat. Methods 2007, 4:651-657.
-
(2007)
Nat. Methods
, vol.4
, pp. 651-657
-
-
Robertson, G.1
Hirst, M.2
Bainbridge, M.3
Bilenky, M.4
Zhao, Y.5
Zeng, T.6
Euskirchen, G.7
Bernier, B.8
Varhol, R.9
Delaney, A.10
-
34
-
-
79952298459
-
Yap1 acts downstream of α-catenin to control epidermal proliferation
-
Schlegelmilch K., Mohseni M., Kirak O., Pruszak J., Rodriguez J.R., Zhou D., Kreger B.T., Vasioukhin V., Avruch J., Brummelkamp T.R., Camargo F.D. Yap1 acts downstream of α-catenin to control epidermal proliferation. Cell 2011, 144:782-795.
-
(2011)
Cell
, vol.144
, pp. 782-795
-
-
Schlegelmilch, K.1
Mohseni, M.2
Kirak, O.3
Pruszak, J.4
Rodriguez, J.R.5
Zhou, D.6
Kreger, B.T.7
Vasioukhin, V.8
Avruch, J.9
Brummelkamp, T.R.10
Camargo, F.D.11
-
35
-
-
79960649307
-
Direct conversion of mouse fibroblasts to hepatocyte-like cells by defined factors
-
Sekiya S., Suzuki A. Direct conversion of mouse fibroblasts to hepatocyte-like cells by defined factors. Nature 2011, 475:390-393.
-
(2011)
Nature
, vol.475
, pp. 390-393
-
-
Sekiya, S.1
Suzuki, A.2
-
36
-
-
64349088929
-
Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA
-
Sekiya T., Muthurajan U.M., Luger K., Tulin A.V., Zaret K.S. Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA. Genes Dev. 2009, 23:804-809.
-
(2009)
Genes Dev.
, vol.23
, pp. 804-809
-
-
Sekiya, T.1
Muthurajan, U.M.2
Luger, K.3
Tulin, A.V.4
Zaret, K.S.5
-
37
-
-
84863175286
-
Yes-associated protein is involved in proliferation and differentiation during postnatal liver development
-
Septer S., Edwards G., Gunewardena S., Wolfe A., Li H., Daniel J., Apte U. Yes-associated protein is involved in proliferation and differentiation during postnatal liver development. Am. J. Physiol. Gastrointest. Liver Physiol. 2012, 302:G493-G503.
-
(2012)
Am. J. Physiol. Gastrointest. Liver Physiol.
, vol.302
, pp. G493-G503
-
-
Septer, S.1
Edwards, G.2
Gunewardena, S.3
Wolfe, A.4
Li, H.5
Daniel, J.6
Apte, U.7
-
38
-
-
84864462544
-
A map of the cis-regulatory sequences in the mouse genome
-
Shen Y., Yue F., McCleary D.F., Ye Z., Edsall L., Kuan S., Wagner U., Dixon J., Lee L., Lobanenkov V.V., Ren B. A map of the cis-regulatory sequences in the mouse genome. Nature 2012, 488:116-120.
-
(2012)
Nature
, vol.488
, pp. 116-120
-
-
Shen, Y.1
Yue, F.2
McCleary, D.F.3
Ye, Z.4
Edsall, L.5
Kuan, S.6
Wagner, U.7
Dixon, J.8
Lee, L.9
Lobanenkov, V.V.10
Ren, B.11
-
39
-
-
70349871718
-
CEAS: cis-regulatory element annotation system
-
Shin H., Liu T., Manrai A.K., Liu X.S. CEAS: cis-regulatory element annotation system. Bioinformatics 2009, 25:2605-2606.
-
(2009)
Bioinformatics
, vol.25
, pp. 2605-2606
-
-
Shin, H.1
Liu, T.2
Manrai, A.K.3
Liu, X.S.4
-
40
-
-
84903542476
-
Direct reprogramming of human fibroblasts to hepatocyte-like cells by synthetic modified mRNAs
-
Simeonov K.P., Uppal H. Direct reprogramming of human fibroblasts to hepatocyte-like cells by synthetic modified mRNAs. PLoS ONE 2014, 9:e100134.
-
(2014)
PLoS ONE
, vol.9
, pp. e100134
-
-
Simeonov, K.P.1
Uppal, H.2
-
41
-
-
84864914697
-
Snail regulates MyoD binding-site occupancy to direct enhancer switching and differentiation-specific transcription in myogenesis
-
Soleimani V.D., Yin H., Jahani-Asl A., Ming H., Kockx C.E., van Ijcken W.F., Grosveld F., Rudnicki M.A. Snail regulates MyoD binding-site occupancy to direct enhancer switching and differentiation-specific transcription in myogenesis. Mol. Cell 2012, 47:457-468.
-
(2012)
Mol. Cell
, vol.47
, pp. 457-468
-
-
Soleimani, V.D.1
Yin, H.2
Jahani-Asl, A.3
Ming, H.4
Kockx, C.E.5
van Ijcken, W.F.6
Grosveld, F.7
Rudnicki, M.A.8
-
42
-
-
84891848152
-
Spheroid culture for enhanced differentiation of human embryonic stem cells to hepatocyte-like cells
-
Subramanian K., Owens D.J., Raju R., Firpo M., O'Brien T.D., Verfaillie C.M., Hu W.S. Spheroid culture for enhanced differentiation of human embryonic stem cells to hepatocyte-like cells. Stem Cells Dev. 2014, 23:124-131.
-
(2014)
Stem Cells Dev.
, vol.23
, pp. 124-131
-
-
Subramanian, K.1
Owens, D.J.2
Raju, R.3
Firpo, M.4
O'Brien, T.D.5
Verfaillie, C.M.6
Hu, W.S.7
-
43
-
-
0038325629
-
Isolation of hepatoblasts based on the expression of Dlk/Pref-1
-
Tanimizu N., Nishikawa M., Saito H., Tsujimura T., Miyajima A. Isolation of hepatoblasts based on the expression of Dlk/Pref-1. J.Cell Sci. 2003, 116:1775-1786.
-
(2003)
J.Cell Sci.
, vol.116
, pp. 1775-1786
-
-
Tanimizu, N.1
Nishikawa, M.2
Saito, H.3
Tsujimura, T.4
Miyajima, A.5
-
44
-
-
84878350949
-
Identification and analysis of murine pancreatic islet enhancers
-
Tennant B.R., Robertson A.G., Kramer M., Li L., Zhang X., Beach M., Thiessen N., Chiu R., Mungall K., Whiting C.J., et al. Identification and analysis of murine pancreatic islet enhancers. Diabetologia 2013, 56:542-552.
-
(2013)
Diabetologia
, vol.56
, pp. 542-552
-
-
Tennant, B.R.1
Robertson, A.G.2
Kramer, M.3
Li, L.4
Zhang, X.5
Beach, M.6
Thiessen, N.7
Chiu, R.8
Mungall, K.9
Whiting, C.J.10
-
45
-
-
0034747205
-
Expression of HNF4alpha isoforms in mouse liver development is regulated by sequential promoter usage and constitutive 3' end splicing
-
Torres-Padilla M.E., Fougère-Deschatrette C., Weiss M.C. Expression of HNF4alpha isoforms in mouse liver development is regulated by sequential promoter usage and constitutive 3' end splicing. Mech. Dev. 2001, 109:183-193.
-
(2001)
Mech. Dev.
, vol.109
, pp. 183-193
-
-
Torres-Padilla, M.E.1
Fougère-Deschatrette, C.2
Weiss, M.C.3
-
46
-
-
49249110970
-
Global analysis of invivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing
-
Wederell E.D., Bilenky M., Cullum R., Thiessen N., Dagpinar M., Delaney A., Varhol R., Zhao Y., Zeng T., Bernier B., et al. Global analysis of invivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing. Nucleic Acids Res. 2008, 36:4549-4564.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 4549-4564
-
-
Wederell, E.D.1
Bilenky, M.2
Cullum, R.3
Thiessen, N.4
Dagpinar, M.5
Delaney, A.6
Varhol, R.7
Zhao, Y.8
Zeng, T.9
Bernier, B.10
-
47
-
-
84879104968
-
Genome-wide microRNA and messenger RNA profiling in rodent liver development implicates mir302b and mir20a in repressing transforming growth factor-beta signaling
-
Wei W., Hou J., Alder O., Ye X., Lee S., Cullum R., Chu A., Zhao Y., Warner S.M., Knight D.A., et al. Genome-wide microRNA and messenger RNA profiling in rodent liver development implicates mir302b and mir20a in repressing transforming growth factor-beta signaling. Hepatology 2013, 57:2491-2501.
-
(2013)
Hepatology
, vol.57
, pp. 2491-2501
-
-
Wei, W.1
Hou, J.2
Alder, O.3
Ye, X.4
Lee, S.5
Cullum, R.6
Chu, A.7
Zhao, Y.8
Warner, S.M.9
Knight, D.A.10
-
48
-
-
84902081616
-
Hippo pathway activity influences liver cell fate
-
Yimlamai D., Christodoulou C., Galli G.G., Yanger K., Pepe-Mooney B., Gurung B., Shrestha K., Cahan P., Stanger B.Z., Camargo F.D. Hippo pathway activity influences liver cell fate. Cell 2014, 157:1324-1338.
-
(2014)
Cell
, vol.157
, pp. 1324-1338
-
-
Yimlamai, D.1
Christodoulou, C.2
Galli, G.G.3
Yanger, K.4
Pepe-Mooney, B.5
Gurung, B.6
Shrestha, K.7
Cahan, P.8
Stanger, B.Z.9
Camargo, F.D.10
-
49
-
-
84878887042
-
Oncofetal gene SALL4 in aggressive hepatocellular carcinoma
-
Yong K.J., Gao C., Lim J.S., Yan B., Yang H., Dimitrov T., Kawasaki A., Ong C.W., Wong K.F., Lee S., et al. Oncofetal gene SALL4 in aggressive hepatocellular carcinoma. N.Engl. J. Med. 2013, 368:2266-2276.
-
(2013)
N.Engl. J. Med.
, vol.368
, pp. 2266-2276
-
-
Yong, K.J.1
Gao, C.2
Lim, J.S.3
Yan, B.4
Yang, H.5
Dimitrov, T.6
Kawasaki, A.7
Ong, C.W.8
Wong, K.F.9
Lee, S.10
-
50
-
-
84874257648
-
The Hippo pathway: regulators and regulations
-
Yu F.X., Guan K.L. The Hippo pathway: regulators and regulations. Genes Dev. 2013, 27:355-371.
-
(2013)
Genes Dev.
, vol.27
, pp. 355-371
-
-
Yu, F.X.1
Guan, K.L.2
-
51
-
-
80455144479
-
Pioneer transcription factors: establishing competence for gene expression
-
Zaret K.S., Carroll J.S. Pioneer transcription factors: establishing competence for gene expression. Genes Dev. 2011, 25:2227-2241.
-
(2011)
Genes Dev.
, vol.25
, pp. 2227-2241
-
-
Zaret, K.S.1
Carroll, J.S.2
-
52
-
-
33745253109
-
Identification and validation of oncogenes in liver cancer using an integrative oncogenomic approach
-
Zender L., Spector M.S., Xue W., Flemming P., Cordon-Cardo C., Silke J., Fan S.T., Luk J.M., Wigler M., Hannon G.J., et al. Identification and validation of oncogenes in liver cancer using an integrative oncogenomic approach. Cell 2006, 125:1253-1267.
-
(2006)
Cell
, vol.125
, pp. 1253-1267
-
-
Zender, L.1
Spector, M.S.2
Xue, W.3
Flemming, P.4
Cordon-Cardo, C.5
Silke, J.6
Fan, S.T.7
Luk, J.M.8
Wigler, M.9
Hannon, G.J.10
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