-
1
-
-
1542288949
-
Secondary active transport mediated by a prokaryotic homologue of ClC Cl- channels
-
Accardi A, Miller C. 2004. Secondary active transport mediated by a prokaryotic homologue of ClC Cl- channels. Nature 427(6977): 803-807.
-
(2004)
Nature
, vol.427
, Issue.6977
, pp. 803-807
-
-
Accardi, A.1
Miller, C.2
-
2
-
-
14844336304
-
Structural and biochemical evidence for an enzymatic quinone redox cycle in Escherichia coli: Identification of a novel quinol monooxygenase
-
Adams MA, Jia Z. 2005. Structural and biochemical evidence for an enzymatic quinone redox cycle in Escherichia coli: identification of a novel quinol monooxygenase. J Biol Chem. 280(9): 8358-8363.
-
(2005)
J Biol Chem
, vol.280
, Issue.9
, pp. 8358-8363
-
-
Adams, M.A.1
Jia, Z.2
-
3
-
-
84901468529
-
High fitness costs and instability of gene duplications reduce rates of evolution of new genes by duplication-divergence mechanisms
-
Adler M, Anjum M, Berg OG, Andersson DI, Sandegren L. 2014. High fitness costs and instability of gene duplications reduce rates of evolution of new genes by duplication-divergence mechanisms. Mol Biol Evol. 31(6): 1526-1535.
-
(2014)
Mol Biol Evol
, vol.31
, Issue.6
, pp. 1526-1535
-
-
Adler, M.1
Anjum, M.2
Berg, O.G.3
Andersson, D.I.4
Sandegren, L.5
-
4
-
-
77951640946
-
A method and server for predicting damaging missense mutations
-
Adzhubei IA, et al. 2010. A method and server for predicting damaging missense mutations. Nat Methods. 7(4): 248-249.
-
(2010)
Nat Methods
, vol.7
, Issue.4
, pp. 248-249
-
-
Adzhubei, I.A.1
-
5
-
-
33947260230
-
Molecular mechanisms of antibacterial multidrug resistance
-
Alekshun MN, Levy SB. 2007. Molecular mechanisms of antibacterial multidrug resistance. Cell 128(6): 1037-1050.
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1037-1050
-
-
Alekshun, M.N.1
Levy, S.B.2
-
6
-
-
0019570557
-
Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons
-
Anderson P, Roth J. 1981. Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons. Proc Natl Acad Sci U S A. 78(5): 3113-3117.
-
(1981)
Proc Natl Acad Sci U S A.
, vol.78
, Issue.5
, pp. 3113-3117
-
-
Anderson, P.1
Roth, J.2
-
7
-
-
70350195337
-
Gene amplification and adaptive evolution in bacteria
-
Andersson DI, Hughes D. 2009. Gene amplification and adaptive evolution in bacteria. Annu Rev Genet. 43: 167-195.
-
(2009)
Annu Rev Genet
, vol.43
, pp. 167-195
-
-
Andersson, D.I.1
Hughes, D.2
-
8
-
-
37549017103
-
Convergence and parallelism reconsidered: What have we learned about the genetics of adaptation?
-
Arendt J, Reznick D. 2008. Convergence and parallelism reconsidered: what have we learned about the genetics of adaptation? Trends Ecol Evol. 23(1): 26-32.
-
(2008)
Trends Ecol Evol
, vol.23
, Issue.1
, pp. 26-32
-
-
Arendt, J.1
Reznick, D.2
-
9
-
-
0034119459
-
Differential expression of over 60 chromosomal genes in Escherichia coli by constitutive expression of MarA
-
Barbosa TM, Levy SB. 2000. Differential expression of over 60 chromosomal genes in Escherichia coli by constitutive expression of MarA. J Bacteriol. 182(12): 3467-3474.
-
(2000)
J Bacteriol
, vol.182
, Issue.12
, pp. 3467-3474
-
-
Barbosa, T.M.1
Levy, S.B.2
-
10
-
-
0020413535
-
Biosynthesis of vitamin K (menaquinone) in bacteria
-
Bentley R, Meganathan R. 1982. Biosynthesis of vitamin K (menaquinone) in bacteria. Microbiol Rev. 46(3): 241-280.
-
(1982)
Microbiol Rev
, vol.46
, Issue.3
, pp. 241-280
-
-
Bentley, R.1
Meganathan, R.2
-
11
-
-
0029835350
-
TheMutT proteins or "nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes
-
Bessman MJ, Frick DN, O'Handley SF. 1996. TheMutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes. J Biol Chem. 271(41): 25059-25062.
-
(1996)
J Biol Chem
, vol.271
, Issue.41
, pp. 25059-25062
-
-
Bessman, M.J.1
Frick, D.N.2
O'Handley, S.F.3
-
12
-
-
70349751622
-
Structure, function and inhibition of RND efflux pumps in gram-negative bacteria: An update
-
Blair JMA, Piddock LJV. 2009. Structure, function and inhibition of RND efflux pumps in gram-negative bacteria: an update. Curr Opin Microbiol. 12(5): 512-519.
-
(2009)
Curr Opin Microbiol
, vol.12
, Issue.5
, pp. 512-519
-
-
Blair, J.M.A.1
Piddock, L.J.V.2
-
13
-
-
0034068228
-
Role of quinones in toxicology
-
Bolton JL, Trush MA, Penning TM, Dryhurst G, Monks TJ. 2000. Role of quinones in toxicology. Chem Res Toxicol. 13(3): 135-160.
-
(2000)
Chem Res Toxicol
, vol.13
, Issue.3
, pp. 135-160
-
-
Bolton, J.L.1
Trush, M.A.2
Penning, T.M.3
Dryhurst, G.4
Monks, T.J.5
-
14
-
-
77954506029
-
Gap5 - Editing the billion fragment sequence assembly
-
Bonfield JK, Whitwham A. 2010. Gap5 - editing the billion fragment sequence assembly. Bioinformatics 26(14): 1699-1703.
-
(2010)
Bioinformatics
, vol.26
, Issue.14
, pp. 1699-1703
-
-
Bonfield, J.K.1
Whitwham, A.2
-
15
-
-
0015240654
-
The alpha-galactosidase from Escherichia coli K12
-
Burstein C, Kepes A. 1971. The alpha-galactosidase from Escherichia coli K12. Biochim Biophys Acta. 230(1): 52-63.
-
(1971)
Biochim Biophys Acta
, vol.230
, Issue.1
, pp. 52-63
-
-
Burstein, C.1
Kepes, A.2
-
16
-
-
66449112829
-
Efflux-mediated antifungal drug resistance
-
Table of Contents
-
Cannon RD, et al. 2009. Efflux-mediated antifungal drug resistance. Clin Microbiol Rev. 22(2): 291-321; Table of Contents.
-
(2009)
Clin Microbiol Rev
, vol.22
, Issue.2
, pp. 291-321
-
-
Cannon, R.D.1
-
17
-
-
0020625499
-
Transposable elements as mutator genes in evolution
-
Chao L, Vargas C, Spear BB, Cox EC. 1983. Transposable elements as mutator genes in evolution. Nature 303(5918): 633-635.
-
(1983)
Nature
, vol.303
, Issue.5918
, pp. 633-635
-
-
Chao, L.1
Vargas, C.2
Spear, B.B.3
Cox, E.C.4
-
18
-
-
77955846669
-
Causes and evolutionary significance of genetic convergence
-
Christin PA, Weinreich DM, Besnard G. 2010. Causes and evolutionary significance of genetic convergence. Trends Genet. 26(9): 400-405.
-
(2010)
Trends Genet
, vol.26
, Issue.9
, pp. 400-405
-
-
Christin, P.A.1
Weinreich, D.M.2
Besnard, G.3
-
19
-
-
33847795537
-
Regulation of bacterial RecA protein function
-
Cox MM. 2007. Regulation of bacterial RecA protein function. Crit Rev Biochem Mol Biol. 42(1): 41-63.
-
(2007)
Crit Rev Biochem Mol Biol
, vol.42
, Issue.1
, pp. 41-63
-
-
Cox, M.M.1
-
20
-
-
84860663163
-
Evolutionary insight from whole-genome sequencing of experimentally evolved microbes
-
Dettman JR, et al. 2012. Evolutionary insight from whole-genome sequencing of experimentally evolved microbes. Mol Ecol. 21(9): 2058-2077.
-
(2012)
Mol Ecol
, vol.21
, Issue.9
, pp. 2058-2077
-
-
Dettman, J.R.1
-
21
-
-
0021333232
-
The interaction of DNA polymerase III and the product of the Escherichia coli mutator gene, mutD
-
DiFrancesco R, Bhatnagar SK, Brown A, Bessman MJ. 1984. The interaction of DNA polymerase III and the product of the Escherichia coli mutator gene, mutD. J Biol Chem. 259(9): 5567-5573.
-
(1984)
J Biol Chem
, vol.259
, Issue.9
, pp. 5567-5573
-
-
Difrancesco, R.1
Bhatnagar, S.K.2
Brown, A.3
Bessman, M.J.4
-
22
-
-
0033987736
-
Mutation nomenclature extensions and suggestions to describe complex mutations: A discussion
-
den Dunnen JT, Antonarakis SE. 2000. Mutation nomenclature extensions and suggestions to describe complex mutations: a discussion. Hum Mutat. 15(1): 7-12.
-
(2000)
Hum Mutat
, vol.15
, Issue.1
, pp. 7-12
-
-
Den Dunnen, J.T.1
Antonarakis, S.E.2
-
23
-
-
0028170336
-
Crystallization and preliminary X-ray diffraction studies on a soluble Escherichia coli quinone oxidoreductase
-
Edwards KJ, Thorn JM, Daniher JA, Dixon NE, Ollis DL. 1994. Crystallization and preliminary X-ray diffraction studies on a soluble Escherichia coli quinone oxidoreductase. J Mol Biol. 240(5): 501-503.
-
(1994)
J Mol Biol
, vol.240
, Issue.5
, pp. 501-503
-
-
Edwards, K.J.1
Thorn, J.M.2
Daniher, J.A.3
Dixon, N.E.4
Ollis, D.L.5
-
24
-
-
70349452052
-
Structural and functional aspects of the multidrug efflux pump AcrB
-
Eicher T, Brandstätter L, Pos KM. 2009. Structural and functional aspects of the multidrug efflux pump AcrB. Biol Chem. 390(8): 693-699.
-
(2009)
Biol Chem
, vol.390
, Issue.8
, pp. 693-699
-
-
Eicher, T.1
Brandstätter, L.2
Pos, K.M.3
-
25
-
-
0036889033
-
Substrate specificity of the RND-type multidrug efflux pumps AcrB and AcrD of Escherichia coli is determined predominately by two large periplasmic loops
-
Elkins CA, Nikaido H. 2002. Substrate specificity of the RND-type multidrug efflux pumps AcrB and AcrD of Escherichia coli is determined predominately by two large periplasmic loops. J Bacteriol. 184(23): 6490-6498.
-
(2002)
J Bacteriol
, vol.184
, Issue.23
, pp. 6490-6498
-
-
Elkins, C.A.1
Nikaido, H.2
-
26
-
-
67549090009
-
Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12
-
Ferenci T, et al. 2009. Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12. J Bacteriol. 191(12): 4025-4029.
-
(2009)
J Bacteriol
, vol.191
, Issue.12
, pp. 4025-4029
-
-
Ferenci, T.1
-
27
-
-
0028900818
-
Cloning, purification, and properties of a novel NADH pyrophosphatase. Evidence for a nucleotide pyrophosphatase catalytic domain in MutT-like enzymes
-
Frick DN, Bessman MJ. 1995. Cloning, purification, and properties of a novel NADH pyrophosphatase. Evidence for a nucleotide pyrophosphatase catalytic domain in MutT-like enzymes. J Biol Chem. 270(4): 1529-1534.
-
(1995)
J Biol Chem
, vol.270
, Issue.4
, pp. 1529-1534
-
-
Frick, D.N.1
Bessman, M.J.2
-
29
-
-
34250219965
-
Chemotherapy-induced resistance by ATP-binding cassette transporter genes
-
Gillet JP, Efferth T, Remacle J. 2007. Chemotherapy-induced resistance by ATP-binding cassette transporter genes. Biochim Biophys Acta. 1775(2): 237-262.
-
(2007)
Biochim Biophys Acta
, vol.1775
, Issue.2
, pp. 237-262
-
-
Gillet, J.P.1
Efferth, T.2
Remacle, J.3
-
30
-
-
33744938480
-
Molecular basis of formaldehyde detoxification. Characterization of two S-formylglutathione hydrolases from Escherichia coli, FrmB and YeiG
-
Gonzalez CF, et al. 2006. Molecular basis of formaldehyde detoxification. characterization of two S-formylglutathione hydrolases from Escherichia coli, FrmB and YeiG. J Biol Chem. 281(20): 14514-14522.
-
(2006)
J Biol Chem
, vol.281
, Issue.20
, pp. 14514-14522
-
-
Gonzalez, C.F.1
-
31
-
-
0026512376
-
Purification, characterization, and partial sequence of the glutathione-dependent formaldehyde dehydrogenase from Escherichia coli: A class III alcohol dehydrogenase
-
Gutheil WG, Holmquist B, Vallee BL. 1992. Purification, characterization, and partial sequence of the glutathione-dependent formaldehyde dehydrogenase from Escherichia coli: a class III alcohol dehydrogenase. Biochemistry 31(2): 475-481.
-
(1992)
Biochemistry
, vol.31
, Issue.2
, pp. 475-481
-
-
Gutheil, W.G.1
Holmquist, B.2
Vallee, B.L.3
-
32
-
-
0021355324
-
Physical and genetic characterization of the melibiose operon and identification of the gene products in Escherichia coli
-
Hanatani M, et al. 1984. Physical and genetic characterization of the melibiose operon and identification of the gene products in Escherichia coli. J Biol Chem. 259(3): 1807-1812.
-
(1984)
J Biol Chem
, vol.259
, Issue.3
, pp. 1807-1812
-
-
Hanatani, M.1
-
33
-
-
67749132534
-
Directed evolution of ionizing radiation resistance in Escherichia coli
-
Harris DR, et al. 2009. Directed evolution of ionizing radiation resistance in Escherichia coli. J Bacteriol. 191(16): 5240-5252.
-
(2009)
J Bacteriol
, vol.191
, Issue.16
, pp. 5240-5252
-
-
Harris, D.R.1
-
34
-
-
67651098662
-
Mechanisms of change in gene copy number
-
Hastings PJ, Lupski JR, Rosenberg SM, Ira G. 2009. Mechanisms of change in gene copy number. Nat Rev Genet. 10(8): 551-564.
-
(2009)
Nat Rev Genet
, vol.10
, Issue.8
, pp. 551-564
-
-
Hastings, P.J.1
Lupski, J.R.2
Rosenberg, S.M.3
Ira, G.4
-
35
-
-
0030026972
-
NADPH-specific quinone reductase is induced by 2-methylene-4- butyrolactone in Escherichia coli
-
Hayashi M, Ohzeki H, Shimada H, Unemoto T. 1996. NADPH-specific quinone reductase is induced by 2-methylene-4-butyrolactone in Escherichia coli. Biochim Biophys Acta. 1273(2): 165-170.
-
(1996)
Biochim Biophys Acta
, vol.1273
, Issue.2
, pp. 165-170
-
-
Hayashi, M.1
Ohzeki, H.2
Shimada, H.3
Unemoto, T.4
-
36
-
-
34147180389
-
Analysis of genetic systems using experimental evolution and whole-genome sequencing
-
Hegreness M, Kishony R. 2007. Analysis of genetic systems using experimental evolution and whole-genome sequencing. Genome Biol. 8(1): 201.
-
(2007)
Genome Biol
, vol.8
, Issue.1
, pp. 201
-
-
Hegreness, M.1
Kishony, R.2
-
37
-
-
52949141463
-
Accelerated evolution of resistance in multidrug environments
-
Hegreness M, Shoresh N, Damian D, Hartl D, Kishony R. 2008. Accelerated evolution of resistance in multidrug environments. Proc Natl Acad Sci U S A. 105(37): 13977-13981.
-
(2008)
Proc Natl Acad Sci U S A.
, vol.105
, Issue.37
, pp. 13977-13981
-
-
Hegreness, M.1
Shoresh, N.2
Damian, D.3
Hartl, D.4
Kishony, R.5
-
38
-
-
4944228604
-
Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR
-
Herring CD, Blattner FR. 2004. Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J Bacteriol. 186(20): 6714-6720.
-
(2004)
J Bacteriol
, vol.186
, Issue.20
, pp. 6714-6720
-
-
Herring, C.D.1
Blattner, F.R.2
-
39
-
-
3042838743
-
Structure of the periplasmic component of a bacterial drug efflux pump
-
Higgins MK, Bokma E, Koronakis E, Hughes C, Koronakis V. 2004. Structure of the periplasmic component of a bacterial drug efflux pump. Proc Natl Acad Sci U S A. 101(27): 9994-9999.
-
(2004)
Proc Natl Acad Sci U S A.
, vol.101
, Issue.27
, pp. 9994-9999
-
-
Higgins, M.K.1
Bokma, E.2
Koronakis, E.3
Hughes, C.4
Koronakis, V.5
-
40
-
-
49949086040
-
The RNA acetyltransferase driven by ATP hydrolysis synthesizes N4-acetylcytidine of tRNA anticodon
-
Ikeuchi Y, Kitahara K, Suzuki T. 2008. The RNA acetyltransferase driven by ATP hydrolysis synthesizes N4-acetylcytidine of tRNA anticodon. EMBO J. 27(16): 2194-2203.
-
(2008)
EMBO J.
, vol.27
, Issue.16
, pp. 2194-2203
-
-
Ikeuchi, Y.1
Kitahara, K.2
Suzuki, T.3
-
41
-
-
0037126294
-
A biological role for prokaryotic ClC chloride channels
-
Iyer R, Iverson TM, Accardi A, Miller C. 2002. A biological role for prokaryotic ClC chloride channels. Nature 419(6908): 715-718.
-
(2002)
Nature
, vol.419
, Issue.6908
, pp. 715-718
-
-
Iyer, R.1
Iverson, T.M.2
Accardi, A.3
Miller, C.4
-
42
-
-
84896728847
-
History of drug-resistant microbes
-
Mayers DL, Georgiev VS, editors. New York: Humana Press
-
Jacoby GA. 2009. History of drug-resistant microbes. In: Mayers DL, Georgiev VS, editors. Antimicrobial drug resistance, infectious disease. New York: Humana Press. p. 3-7.
-
(2009)
Antimicrobial Drug Resistance, Infectious Disease
, pp. 3-7
-
-
Jacoby, G.A.1
-
43
-
-
0024075832
-
Gene organization in the region containing a new gene involved in chromosome partition in Escherichia coli
-
Kato J, Nishimura Y, Yamada M, Suzuki H, Hirota Y. 1988. Gene organization in the region containing a new gene involved in chromosome partition in Escherichia coli. J Bacteriol. 170(9): 3967-3977.
-
(1988)
J Bacteriol
, vol.170
, Issue.9
, pp. 3967-3977
-
-
Kato, J.1
Nishimura, Y.2
Yamada, M.3
Suzuki, H.4
Hirota, Y.5
-
44
-
-
84865866440
-
Experimental evolution
-
Kawecki TJ, et al. 2012. Experimental evolution. Trends Ecol Evol. 27(10): 547-560.
-
(2012)
Trends Ecol Evol
, vol.27
, Issue.10
, pp. 547-560
-
-
Kawecki, T.J.1
-
45
-
-
78651281217
-
EcoCyc: A comprehensive database of Escherichia coli biology
-
Keseler IM, et al. 2011. EcoCyc: a comprehensive database of Escherichia coli biology. Nucleic Acids Res. 39(Database issue):D583-D590.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.DATABASE ISSUE
-
-
Keseler, I.M.1
-
46
-
-
0036224939
-
Over 1000 genes are involved in the DNA damage response of Escherichia coli
-
Khil PP, Camerini-Otero RD. 2002. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Mol Microbiol. 44(1): 89-105.
-
(2002)
Mol Microbiol
, vol.44
, Issue.1
, pp. 89-105
-
-
Khil, P.P.1
Camerini-Otero, R.D.2
-
47
-
-
84863229597
-
VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
-
Koboldt DC, et al. 2012. VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing. Genome Res. 22(3): 568-576.
-
(2012)
Genome Res
, vol.22
, Issue.3
, pp. 568-576
-
-
Koboldt, D.C.1
-
48
-
-
0021962878
-
Genetic recombination of bacterial plasmid DNA: Effect of RecF pathway mutations on plasmid recombination in Escherichia coli
-
Kolodner R, Fishel RA, Howard M. 1985. Genetic recombination of bacterial plasmid DNA: effect of RecF pathway mutations on plasmid recombination in Escherichia coli. J Bacteriol. 163(3): 1060-1066.
-
(1985)
J Bacteriol
, vol.163
, Issue.3
, pp. 1060-1066
-
-
Kolodner, R.1
Fishel, R.A.2
Howard, M.3
-
49
-
-
33846023053
-
Genome-wide analysis of substrate specificities of the Escherichia coli haloacid dehalogenase-like phosphatase family
-
Kuznetsova E, et al. 2006. Genome-wide analysis of substrate specificities of the Escherichia coli haloacid dehalogenase-like phosphatase family. J Biol Chem. 281(47): 36149-36161.
-
(2006)
J Biol Chem
, vol.281
, Issue.47
, pp. 36149-36161
-
-
Kuznetsova, E.1
-
50
-
-
0029860724
-
High mutation frequencies among Escherichia coli and salmonella pathogens
-
LeClerc JE, Li B, Payne WL, Cebula TA. 1996. High mutation frequencies among Escherichia coli and salmonella pathogens. Science 274(5290): 1208-1211.
-
(1996)
Science
, vol.274
, Issue.5290
, pp. 1208-1211
-
-
Leclerc, J.E.1
Li, B.2
Payne, W.L.3
Cebula, T.A.4
-
51
-
-
0022216068
-
Constraints on the coevolution of bacteria and virulent phage - A model, some experiments, and predictions for natural communities
-
Lenski RE, Levin BR. 1985. Constraints on the coevolution of bacteria and virulent phage - a model, some experiments, and predictions for natural communities. Am Nat. 125(4): 585-602.
-
(1985)
Am Nat
, vol.125
, Issue.4
, pp. 585-602
-
-
Lenski, R.E.1
Levin, B.R.2
-
52
-
-
35548974675
-
Crystal structure of the transcriptional regulator AcrR from Escherichia coli
-
Li M, et al. 2007. Crystal structure of the transcriptional regulator AcrR from Escherichia coli. J Mol Biol. 374(3): 591-603.
-
(2007)
J Mol Biol
, vol.374
, Issue.3
, pp. 591-603
-
-
Li, M.1
-
53
-
-
0027267650
-
The 92-min region of the Escherichia coli chromosome: Location and cloning of the ubiA and alr genes
-
Lilley PE, Stamford NP, Vasudevan SG, Dixon NE. 1993. The 92-min region of the Escherichia coli chromosome: location and cloning of the ubiA and alr genes. Gene 129(1): 9-16.
-
(1993)
Gene
, vol.129
, Issue.1
, pp. 9-16
-
-
Lilley, P.E.1
Stamford, N.P.2
Vasudevan, S.G.3
Dixon, N.E.4
-
54
-
-
0141924871
-
Mutation rate and evolution of fluoroquinolone resistance in Escherichia coli isolates from patients with urinary tract infections
-
Lindgren PK, Karlsson A, Hughes D. 2003. Mutation rate and evolution of fluoroquinolone resistance in Escherichia coli isolates from patients with urinary tract infections. Antimicrob Agents Chemother. 47(10): 3222-3232.
-
(2003)
Antimicrob Agents Chemother
, vol.47
, Issue.10
, pp. 3222-3232
-
-
Lindgren, P.K.1
Karlsson, A.2
Hughes, D.3
-
55
-
-
33845736364
-
CsoR is a novel Mycobacterium tuberculosis coppersensing transcriptional regulator
-
Liu T, et al. 2007. CsoR is a novel Mycobacterium tuberculosis coppersensing transcriptional regulator. Nat Chem Biol. 3(1): 60-68.
-
(2007)
Nat Chem Biol
, vol.3
, Issue.1
, pp. 60-68
-
-
Liu, T.1
-
56
-
-
79959981709
-
Convergence, adaptation, and constraint
-
Losos JB. 2011. Convergence, adaptation, and constraint. Evolution 65(7): 1827-1840.
-
(2011)
Evolution
, vol.65
, Issue.7
, pp. 1827-1840
-
-
Losos, J.B.1
-
57
-
-
2942630097
-
Encoded errors: Mutations and rearrangementsmediated by misalignment at repetitive DNA sequences
-
Lovett ST. 2004. Encoded errors: mutations and rearrangementsmediated by misalignment at repetitive DNA sequences. Mol Microbiol. 52(5): 1243-1253.
-
(2004)
Mol Microbiol
, vol.52
, Issue.5
, pp. 1243-1253
-
-
Lovett, S.T.1
-
58
-
-
0030023489
-
The local repressor AcrR plays a modulating role in the regulation of acrAB genes of Escherichia coli by global stress signals
-
Ma D, Alberti M, Lynch C, Nikaido H, Hearst JE. 1996. The local repressor AcrR plays a modulating role in the regulation of acrAB genes of Escherichia coli by global stress signals. Mol Microbiol. 19(1): 101-112.
-
(1996)
Mol Microbiol
, vol.19
, Issue.1
, pp. 101-112
-
-
Ma, D.1
Alberti, M.2
Lynch, C.3
Nikaido, H.4
Hearst, J.E.5
-
59
-
-
0027508337
-
Molecular cloning and characterization of acrA and acrE genes of Escherichia coli
-
Ma D, et al. 1993.Molecular cloning and characterization of acrA and acrE genes of Escherichia coli. J Bacteriol. 175(19): 6299-6313.
-
(1993)
J Bacteriol
, vol.175
, Issue.19
, pp. 6299-6313
-
-
Ma, D.1
-
60
-
-
0028926676
-
Genes acrA and acrB encode a stress-induced efflux system of Escherichia coli
-
Ma D, et al. 1995. Genes acrA and acrB encode a stress-induced efflux system of Escherichia coli. Mol Microbiol. 16(1): 45-55.
-
(1995)
Mol Microbiol
, vol.16
, Issue.1
, pp. 45-55
-
-
Ma, D.1
-
61
-
-
77952556349
-
The population genetics of antibiotic resistance: Integrating molecular mechanisms and treatment contexts
-
MacLean RC, Hall AR, Perron GG, Buckling A. 2010. The population genetics of antibiotic resistance: integrating molecular mechanisms and treatment contexts. Nat Rev Genet. 11(6): 405-414.
-
(2010)
Nat Rev Genet
, vol.11
, Issue.6
, pp. 405-414
-
-
MacLean, R.C.1
Hall, A.R.2
Perron, G.G.3
Buckling, A.4
-
62
-
-
84874193830
-
Evaluating evolutionary models of stress-induced mutagenesis in bacteria
-
MacLean RC, Torres-Barceló C, Moxon R. 2013. Evaluating evolutionary models of stress-induced mutagenesis in bacteria. Nat Rev Genet. 14(3): 221-227.
-
(2013)
Nat Rev Genet
, vol.14
, Issue.3
, pp. 221-227
-
-
MacLean, R.C.1
Torres-Barceló, C.2
Moxon, R.3
-
63
-
-
0030004341
-
Identification for mar mutants among quinolone-resistant clinical isolates of Escherichia coli
-
Maneewannakul K, Levy SB. 1996. Identification for mar mutants among quinolone-resistant clinical isolates of Escherichia coli. Antimicrob Agents Chemother. 40(7): 1695-1698.
-
(1996)
Antimicrob Agents Chemother
, vol.40
, Issue.7
, pp. 1695-1698
-
-
Maneewannakul, K.1
Levy, S.B.2
-
64
-
-
0030777211
-
Highly variable mutation rates in commensal and pathogenic Escherichia coli
-
Matic I, et al. 1997. Highly variable mutation rates in commensal and pathogenic Escherichia coli. Science 277(5333): 1833-1834.
-
(1997)
Science
, vol.277
, Issue.5333
, pp. 1833-1834
-
-
Matic, I.1
-
65
-
-
30744470374
-
The Nudix hydrolase superfamily
-
McLennan AG. 2006. The Nudix hydrolase superfamily. Cell Mol Life Sci. 63(2): 123-143.
-
(2006)
Cell Mol Life Sci
, vol.63
, Issue.2
, pp. 123-143
-
-
McLennan, A.G.1
-
66
-
-
33644833626
-
Conformational flexibility in the multidrug efflux system protein AcrA
-
Mikolosko J, Bobyk K, Zgurskaya HI, Ghosh P. 2006. Conformational flexibility in the multidrug efflux system protein AcrA. Structure 14(3): 577-587.
-
(2006)
Structure
, vol.14
, Issue.3
, pp. 577-587
-
-
Mikolosko, J.1
Bobyk, K.2
Zgurskaya, H.I.3
Ghosh, P.4
-
67
-
-
0024384952
-
Molecular analysis of the Escherichia coli recO gene
-
Morrison PT, Lovett ST, Gilson LE, Kolodner R. 1989. Molecular analysis of the Escherichia coli recO gene. J Bacteriol. 171(7): 3641-3649.
-
(1989)
J Bacteriol
, vol.171
, Issue.7
, pp. 3641-3649
-
-
Morrison, P.T.1
Lovett, S.T.2
Gilson, L.E.3
Kolodner, R.4
-
68
-
-
34247271405
-
DNA replication initiation: Mechanisms and regulation in bacteria
-
Mott ML, Berger JM. 2007. DNA replication initiation: mechanisms and regulation in bacteria. Nat Rev Microbiol. 5(5): 343-354.
-
(2007)
Nat Rev Microbiol
, vol.5
, Issue.5
, pp. 343-354
-
-
Mott, M.L.1
Berger, J.M.2
-
69
-
-
0024299299
-
Purification and analysis of the structure of alphagalactosidase from Escherichia coli
-
Nagao Y, et al. 1988. Purification and analysis of the structure of alphagalactosidase from Escherichia coli. Biochem Biophys Res Commun. 151(1): 236-241.
-
(1988)
Biochem Biophys Res Commun
, vol.151
, Issue.1
, pp. 236-241
-
-
Nagao, Y.1
-
70
-
-
0015233824
-
The function of menaquinone (vitamin K 2) in Escherichia coli K-12
-
Newton NA, Cox GB, Gibson F. 1971. The function of menaquinone (vitamin K 2) in Escherichia coli K-12. Biochim Biophys Acta. 244(1): 155-166.
-
(1971)
Biochim Biophys Acta
, vol.244
, Issue.1
, pp. 155-166
-
-
Newton, N.A.1
Cox, G.B.2
Gibson, F.3
-
71
-
-
84890127117
-
Lon protease inactivation, or translocation of the lon gene, potentiate bacterial evolution to antibiotic resistance
-
Nicoloff H, Andersson DI. 2013. Lon protease inactivation, or translocation of the lon gene, potentiate bacterial evolution to antibiotic resistance. Mol Microbiol. 90: 1233-1248.
-
(2013)
Mol Microbiol
, vol.90
, pp. 1233-1248
-
-
Nicoloff, H.1
Andersson, D.I.2
-
72
-
-
33947225901
-
Increased genome instability in Escherichia coli lon mutants: Relation to emergence of multipleantibiotic- resistant (Mar) mutants caused by IS elements and large tandem genomic amplifications
-
Nicoloff H, Perreten V, Levy SB. 2007. Increased genome instability in Escherichia coli lon mutants: relation to emergence of multipleantibiotic- resistant (Mar) mutants caused by IS elements and large tandem genomic amplifications. Antimicrob Agents Chemother. 51(4): 1293-1303.
-
(2007)
Antimicrob Agents Chemother
, vol.51
, Issue.4
, pp. 1293-1303
-
-
Nicoloff, H.1
Perreten, V.2
Levy, S.B.3
-
73
-
-
33744998721
-
Role for tandem duplication and lon protease in AcrAB-TolC-dependent multiple antibiotic resistance (Mar) in an Escherichia coli mutant without mutations in marRAB or acrRAB
-
Nicoloff H, Perreten V, McMurry LM, Levy SB. 2006. Role for tandem duplication and lon protease in AcrAB-TolC-dependent multiple antibiotic resistance (Mar) in an Escherichia coli mutant without mutations in marRAB or acrRAB. J Bacteriol. 188(12): 4413-4423.
-
(2006)
J Bacteriol
, vol.188
, Issue.12
, pp. 4413-4423
-
-
Nicoloff, H.1
Perreten, V.2
McMurry, L.M.3
Levy, S.B.4
-
74
-
-
64649096369
-
Mechanisms of RND multidrug efflux pumps
-
Nikaido H, Takatsuka Y. 2009. Mechanisms of RND multidrug efflux pumps. Biochim Biophys Acta. 1794(5): 769-781.
-
(2009)
Biochim Biophys Acta
, vol.1794
, Issue.5
, pp. 769-781
-
-
Nikaido, H.1
Takatsuka, Y.2
-
75
-
-
0034817367
-
Analysis of a complete library of putative drug transporter genes in Escherichia coli
-
Nishino K, Yamaguchi A. 2001. Analysis of a complete library of putative drug transporter genes in Escherichia coli. J Bacteriol. 183(20): 5803-5812.
-
(2001)
J Bacteriol
, vol.183
, Issue.20
, pp. 5803-5812
-
-
Nishino, K.1
Yamaguchi, A.2
-
76
-
-
0034685940
-
High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection
-
Oliver A, Cantón R, Campo P, Baquero F, Blázquez J. 2000. High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection. Science 288(5469): 1251-1254.
-
(2000)
Science
, vol.288
, Issue.5469
, pp. 1251-1254
-
-
Oliver, A.1
Cantón, R.2
Campo, P.3
Baquero, F.4
Blázquez, J.5
-
77
-
-
0033528659
-
Unexpected divergence of enzyme function and sequence: "n-acylamino acid racemase" is o-succinylbenzoate synthase
-
Palmer DR, et al. 1999. Unexpected divergence of enzyme function and sequence: "N-acylamino acid racemase" is o-succinylbenzoate synthase. Biochemistry 38(14): 4252-4258.
-
(1999)
Biochemistry
, vol.38
, Issue.14
, pp. 4252-4258
-
-
Palmer, D.R.1
-
78
-
-
0035823272
-
Humans as the world's greatest evolutionary force
-
Palumbi SR. 2001. Humans as the world's greatest evolutionary force. Science 293(5536): 1786-1790.
-
(2001)
Science
, vol.293
, Issue.5536
, pp. 1786-1790
-
-
Palumbi, S.R.1
-
79
-
-
39749120541
-
Characterization of the Escherichia coli K-12 ydhYVWXUT operon: Regulation by FNR, NarL and NarP
-
Partridge JD, et al. 2008. Characterization of the Escherichia coli K-12 ydhYVWXUT operon: regulation by FNR, NarL and NarP. Microbiology 154(Pt 2): 608-618.
-
(2008)
Microbiology
, vol.154
, Issue.PART 2
, pp. 608-618
-
-
Partridge, J.D.1
-
80
-
-
84876955225
-
When the most potent combination of antibiotics selects for the greatest bacterial load: The smile-frown transition
-
Peña-Miller R, et al. 2013. When the most potent combination of antibiotics selects for the greatest bacterial load: the smile-frown transition. PLoS Biol. 11(4):e1001540.
-
(2013)
PLoS Biol
, vol.11
, Issue.4
-
-
Peña-Miller, R.1
-
81
-
-
78650304100
-
Synonymous but not the same: The causes and consequences of codon bias
-
Plotkin JB, Kudla G. 2011. Synonymous but not the same: the causes and consequences of codon bias. Nat Rev Genet. 12(1): 32-42.
-
(2011)
Nat Rev Genet
, vol.12
, Issue.1
, pp. 32-42
-
-
Plotkin, J.B.1
Kudla, G.2
-
82
-
-
11144227620
-
General enzymatic screens identify three new nucleotidases in Escherichia coli biochemical characterization of SurE, YfbR, and YjjG
-
Proudfoot M, et al. 2004. General enzymatic screens identify three new nucleotidases in Escherichia coli. biochemical characterization of SurE, YfbR, and YjjG. J Biol Chem. 279(52): 54687-54694.
-
(2004)
J Biol Chem
, vol.279
, Issue.52
, pp. 54687-54694
-
-
Proudfoot, M.1
-
83
-
-
0344328817
-
An expanded genomescale model of Escherichia coli K-12 (iJR904 GSM/GPR)
-
Reed JL, Vo TD, Schilling CH, Palsson BO. 2003. An expanded genomescale model of Escherichia coli K-12 (iJR904 GSM/GPR). Genome Biol. 4(9):R54.
-
(2003)
Genome Biol
, vol.4
, Issue.9
-
-
Reed, J.L.1
Vo, T.D.2
Schilling, C.H.3
Palsson, B.O.4
-
84
-
-
0028239439
-
A functional superfamily of sodium/solute symporters
-
Reizer J, Reizer A, Saier MH. 1994. A functional superfamily of sodium/solute symporters. Biochim Biophys Acta. 1197(2): 133-166.
-
(1994)
Biochim Biophys Acta
, vol.1197
, Issue.2
, pp. 133-166
-
-
Reizer, J.1
Reizer, A.2
Saier, M.H.3
-
85
-
-
16844370956
-
Identification of rcnA (yohM), a nickel and cobalt resistance gene in Escherichia coli
-
Rodrigue A, Effantin G, Mandrand-Berthelot MA. 2005. Identification of rcnA (yohM), a nickel and cobalt resistance gene in Escherichia coli. J Bacteriol. 187(8): 2912-2916.
-
(2005)
J Bacteriol
, vol.187
, Issue.8
, pp. 2912-2916
-
-
Rodrigue, A.1
Effantin, G.2
Mandrand-Berthelot, M.A.3
-
86
-
-
7544236965
-
Quinone reductases multitasking in the metabolic world
-
Ross D. 2004. Quinone reductases multitasking in the metabolic world. Drug Metab Rev. 36(3-4): 639-654.
-
(2004)
Drug Metab Rev
, vol.3634
, pp. 639-654
-
-
Ross, D.1
-
87
-
-
0002043965
-
Escherichia coli and Salmonella typhimurium: Cellular and molecular biology
-
2nd ed. Washington (DC): American Society for Microbiology
-
Roth JR, et al. 1996. Escherichia coli and Salmonella typhimurium: cellular and molecular biology, 2nd ed. Chapter rearrangements of the bacterial chromosome: formation and applications. Washington (DC): American Society for Microbiology. p. 2256-2276.
-
(1996)
Chapter Rearrangements of the Bacterial Chromosome: Formation and Applications
, pp. 2256-2276
-
-
Roth, J.R.1
-
88
-
-
64649105182
-
Structures of AcrR and CmeR: Insight into the mechanisms of transcriptional repression and multidrug recognition in the TetR family of regulators
-
Routh MD, Su CC, Zhang Q, Yu EW. 2009. Structures of AcrR and CmeR: insight into the mechanisms of transcriptional repression and multidrug recognition in the TetR family of regulators. Biochim Biophys Acta. 1794(5): 844-851.
-
(2009)
Biochim Biophys Acta
, vol.1794
, Issue.5
, pp. 844-851
-
-
Routh, M.D.1
Su, C.C.2
Zhang, Q.3
Yu, E.W.4
-
89
-
-
36549022665
-
Role of SufI (FtsP) in cell division of Escherichia coli: Evidence for its involvement in stabilizing the assembly of the divisome
-
Samaluru H, SaiSree L, Reddy M. 2007. Role of SufI (FtsP) in cell division of Escherichia coli: evidence for its involvement in stabilizing the assembly of the divisome. J Bacteriol. 189(22): 8044-8052.
-
(2007)
J Bacteriol
, vol.189
, Issue.22
, pp. 8044-8052
-
-
Samaluru, H.1
Saisree, L.2
Reddy, M.3
-
90
-
-
1242339653
-
Phosphotransferase-mediated transport of the osmolyte 2-o-alpha-mannosyl-d-glycerate in Escherichia coli occurs by the product of the mngA (hrsA) gene and is regulated by the mngR (farR) gene product acting as repressor
-
Sampaio MM, et al. 2004. Phosphotransferase-mediated transport of the osmolyte 2-o-alpha-mannosyl-d-glycerate in Escherichia coli occurs by the product of the mngA (hrsA) gene and is regulated by the mngR (farR) gene product acting as repressor. J Biol Chem. 279(7): 5537-5548.
-
(2004)
J Biol Chem
, vol.279
, Issue.7
, pp. 5537-5548
-
-
Sampaio, M.M.1
-
91
-
-
77954029768
-
Transporters as mediators of drug resistance in Plasmodium falciparum
-
Sanchez CP, Dave A, SteinWD, Lanzer M. 2010. Transporters as mediators of drug resistance in Plasmodium falciparum. Int J Parasitol. 40(10): 1109-1118.
-
(2010)
Int J Parasitol
, vol.40
, Issue.10
, pp. 1109-1118
-
-
Sanchez, C.P.1
Dave, A.2
Stein, W.D.3
Lanzer, M.4
-
92
-
-
67651204792
-
Bacterial gene amplification: Implications for the evolution of antibiotic resistance
-
Sandegren L, Andersson DI. 2009. Bacterial gene amplification: implications for the evolution of antibiotic resistance. Nat Rev Microbiol. 7(8): 578-588.
-
(2009)
Nat Rev Microbiol
, vol.7
, Issue.8
, pp. 578-588
-
-
Sandegren, L.1
Andersson, D.I.2
-
94
-
-
0020981110
-
Identification of the epsilon-subunit of Escherichia coli DNA polymerase III holoenzyme as the dnaQ gene product: A fidelity subunit for DNA replication
-
Scheuermann R, Tam S, Burgers PM, Lu C, Echols H. 1983. Identification of the epsilon-subunit of Escherichia coli DNA polymerase III holoenzyme as the dnaQ gene product: a fidelity subunit for DNA replication. Proc Natl Acad Sci U S A. 80(23): 7085-7089.
-
(1983)
Proc Natl Acad Sci U S A.
, vol.80
, Issue.23
, pp. 7085-7089
-
-
Scheuermann, R.1
Tam, S.2
Burgers, P.M.3
Lu, C.4
Echols, H.5
-
95
-
-
0014320516
-
Analysis of melibiose mutants deficient in alpha-galactosidase and thiomethylgalactoside permease II in Escherichia coli K-12
-
Schmitt R. 1968. Analysis of melibiose mutants deficient in alpha-galactosidase and thiomethylgalactoside permease II in Escherichia coli K-12. J Bacteriol. 96(2): 462-471.
-
(1968)
J Bacteriol
, vol.96
, Issue.2
, pp. 462-471
-
-
Schmitt, R.1
-
96
-
-
41749113291
-
An isochromosome confers drug resistance in vivo by amplification of two genes, ERG11 and TAC1
-
Selmecki A, Gerami-Nejad M, Paulson C, Forche A, Berman J. 2008. An isochromosome confers drug resistance in vivo by amplification of two genes, ERG11 and TAC1. Mol Microbiol. 68(3): 624-641.
-
(2008)
Mol Microbiol
, vol.68
, Issue.3
, pp. 624-641
-
-
Selmecki, A.1
Gerami-Nejad, M.2
Paulson, C.3
Forche, A.4
Berman, J.5
-
97
-
-
0029025536
-
Characterization of MarR, the repressor of the multiple antibiotic resistance (mar) operon in Escherichia coli
-
Seoane AS, Levy SB. 1995. Characterization of MarR, the repressor of the multiple antibiotic resistance (mar) operon in Escherichia coli. J Bacteriol. 177(12): 3414-3419.
-
(1995)
J Bacteriol
, vol.177
, Issue.12
, pp. 3414-3419
-
-
Seoane, A.S.1
Levy, S.B.2
-
98
-
-
0035224943
-
A functional update of the Escherichia coli K-12 genome
-
Serres MH, et al. 2001. A functional update of the Escherichia coli K-12 genome. Genome Biol. 2(9)RESEARCH0035.
-
(2001)
Genome Biol
, vol.2
, Issue.9
-
-
Serres, M.H.1
-
99
-
-
84876348105
-
Sounds of silence: Synonymous nucleotides as a key to biological regulation and complexity
-
Shabalina SA, Spiridonov NA, Kashina A. 2013. Sounds of silence: synonymous nucleotides as a key to biological regulation and complexity. Nucleic Acids Res. 41(4): 2073-2094.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.4
, pp. 2073-2094
-
-
Shabalina, S.A.1
Spiridonov, N.A.2
Kashina, A.3
-
100
-
-
0027337876
-
Menaquinone (vitamin K2) biosynthesis: Cloning, nucleotide sequence, and expression of the menC gene from Escherichia coli
-
Sharma V, Meganathan R, Hudspeth ME. 1993. Menaquinone (vitamin K2) biosynthesis: cloning, nucleotide sequence, and expression of the menC gene from Escherichia coli. J Bacteriol. 175(15): 4917-4921.
-
(1993)
J Bacteriol
, vol.175
, Issue.15
, pp. 4917-4921
-
-
Sharma, V.1
Meganathan, R.2
Hudspeth, M.E.3
-
102
-
-
0030620273
-
Evolution of highmutation rates in experimental populations of E coli
-
Sniegowski PD, Gerrish PJ, Lenski RE. 1997. Evolution of highmutation rates in experimental populations of E. coli. Nature 387(6634): 703-705.
-
(1997)
Nature
, vol.387
, Issue.6634
, pp. 703-705
-
-
Sniegowski, P.D.1
Gerrish, P.J.2
Lenski, R.E.3
-
103
-
-
78149359895
-
Adaptation genomics: The next generation
-
Stapley J, et al. 2010. Adaptation genomics: the next generation. Trends Ecol Evol. 25(12): 705-712.
-
(2010)
Trends Ecol Evol
, vol.25
, Issue.12
, pp. 705-712
-
-
Stapley, J.1
-
104
-
-
34547124088
-
Characterization of the multidrug efflux regulator AcrR from Escherichia coli
-
Su CC, Rutherford DJ, Yu EW. 2007. Characterization of the multidrug efflux regulator AcrR from Escherichia coli. Biochem Biophys Res Commun. 361(1): 85-90.
-
(2007)
Biochem Biophys Res Commun
, vol.361
, Issue.1
, pp. 85-90
-
-
Su, C.C.1
Rutherford, D.J.2
Yu, E.W.3
-
105
-
-
0035086501
-
Antibiotic susceptibility profiles of Escherichia coli strains lacking multidrug efflux pump genes
-
Sulavik MC, et al. 2001. Antibiotic susceptibility profiles of Escherichia coli strains lacking multidrug efflux pump genes. Antimicrob Agents Chemother. 45(4): 1126-1136.
-
(2001)
Antimicrob Agents Chemother
, vol.45
, Issue.4
, pp. 1126-1136
-
-
Sulavik, M.C.1
-
106
-
-
66349137043
-
The assembled structure of a complete tripartite bacterial multidrug efflux pump
-
Symmons MF, Bokma E, Koronakis E, Hughes C, Koronakis V. 2009. The assembled structure of a complete tripartite bacterial multidrug efflux pump. Proc Natl Acad Sci U S A. 106(17): 7173-7178.
-
(2009)
Proc Natl Acad Sci U S A.
, vol.106
, Issue.17
, pp. 7173-7178
-
-
Symmons, M.F.1
Bokma, E.2
Koronakis, E.3
Hughes, C.4
Koronakis, V.5
-
107
-
-
0030620272
-
Role of mutator alleles in adaptive evolution
-
Taddei F, et al. 1997. Role of mutator alleles in adaptive evolution. Nature 387(6634): 700-702.
-
(1997)
Nature
, vol.387
, Issue.6634
, pp. 700-702
-
-
Taddei, F.1
-
108
-
-
2542478884
-
Evolutionary significance of stressinduced mutagenesis in bacteria
-
Tenaillon O, Denamur E, Matic I. 2004. Evolutionary significance of stressinduced mutagenesis in bacteria. Trends Microbiol. 12(6): 264-270.
-
(2004)
Trends Microbiol
, vol.12
, Issue.6
, pp. 264-270
-
-
Tenaillon, O.1
Denamur, E.2
Matic, I.3
-
109
-
-
84856258903
-
The molecular diversity of adaptive convergence
-
Tenaillon O, et al. 2012. The molecular diversity of adaptive convergence. Science 335(6067): 457-461.
-
(2012)
Science
, vol.335
, Issue.6067
, pp. 457-461
-
-
Tenaillon, O.1
-
110
-
-
0034609515
-
Evolution of enzymatic activity in the enolase superfamily: Structure of o-succinylbenzoate synthase from Escherichia coli in complex with Mg2+ and o-succinylbenzoate
-
Thompson TB, et al. 2000. Evolution of enzymatic activity in the enolase superfamily: structure of o-succinylbenzoate synthase from Escherichia coli in complex with Mg2+ and o-succinylbenzoate. Biochemistry 39(35): 10662-10676.
-
(2000)
Biochemistry
, vol.39
, Issue.35
, pp. 10662-10676
-
-
Thompson, T.B.1
-
111
-
-
0028977970
-
Crystal structure of Escherichia coli QOR quinone oxidoreductase complexed with NADPH
-
Thorn JM, Barton JD, Dixon NE, Ollis DL, Edwards KJ. 1995. Crystal structure of Escherichia coli QOR quinone oxidoreductase complexed with NADPH. J Mol Biol. 249(4): 785-799.
-
(1995)
J Mol Biol
, vol.249
, Issue.4
, pp. 785-799
-
-
Thorn, J.M.1
Barton, J.D.2
Dixon, N.E.3
Ollis, D.L.4
Edwards, K.J.5
-
112
-
-
34247133148
-
The Escherichia coli protein YjjG is a house-cleaning nucleotidase in vivo
-
Titz B, Häuser R, Engelbrecher A, Uetz P. 2007. The Escherichia coli protein YjjG is a house-cleaning nucleotidase in vivo. FEMS Microbiol Lett. 270(1): 49-57.
-
(2007)
FEMS Microbiol Lett
, vol.270
, Issue.1
, pp. 49-57
-
-
Titz, B.1
Häuser, R.2
Engelbrecher, A.3
Uetz, P.4
-
113
-
-
84555171441
-
Evolutionary paths to antibiotic resistance under dynamically sustained drug selection
-
Toprak E, et al. 2011. Evolutionary paths to antibiotic resistance under dynamically sustained drug selection. Nat Genet. 44(1): 101-105.
-
(2011)
Nat Genet
, vol.44
, Issue.1
, pp. 101-105
-
-
Toprak, E.1
-
114
-
-
79952055329
-
Homoplasy: From detecting pattern to determining process and mechanism of evolution
-
Wake DB, Wake MH, Specht CD. 2011. Homoplasy: from detecting pattern to determining process and mechanism of evolution. Science 331(6020): 1032-1035.
-
(2011)
Science
, vol.331
, Issue.6020
, pp. 1032-1035
-
-
Wake, D.B.1
Wake, M.H.2
Specht, C.D.3
-
115
-
-
0034680167
-
Molecular mechanisms that confer antibacterial drug resistance
-
Walsh C. 2000. Molecular mechanisms that confer antibacterial drug resistance. Nature 406(6797): 775-781.
-
(2000)
Nature
, vol.406
, Issue.6797
, pp. 775-781
-
-
Walsh, C.1
-
117
-
-
0035038579
-
Genetic characterization of highly fluoroquinolone-resistant clinical Escherichia coli strains from China: Role of acrR mutations
-
Wang H, Dzink-Fox JL, Chen M, Levy SB. 2001. Genetic characterization of highly fluoroquinolone-resistant clinical Escherichia coli strains from China: role of acrR mutations. Antimicrob Agents Chemother. 45(5): 1515-1521.
-
(2001)
Antimicrob Agents Chemother
, vol.45
, Issue.5
, pp. 1515-1521
-
-
Wang, H.1
Dzink-Fox, J.L.2
Chen, M.3
Levy, S.B.4
-
118
-
-
0035032566
-
Absence of mutations in marRAB or soxRS in acrB-overexpressing fluoroquinolone-resistant clinical and veterinary isolates of Escherichia coli
-
Webber MA, Piddock LJ. 2001. Absence of mutations in marRAB or soxRS in acrB-overexpressing fluoroquinolone-resistant clinical and veterinary isolates of Escherichia coli. Antimicrob Agents Chemother. 45(5): 1550-1552.
-
(2001)
Antimicrob Agents Chemother
, vol.45
, Issue.5
, pp. 1550-1552
-
-
Webber, M.A.1
Piddock, L.J.2
-
119
-
-
80455129691
-
SNVer: A statistical tool for variant calling in analysis of pooled or individual next-generation sequencing data
-
Wei Z, Wang W, Hu P, Lyon GJ, Hakonarson H. 2011. SNVer: a statistical tool for variant calling in analysis of pooled or individual next-generation sequencing data. Nucleic Acids Res. 39(19):e132.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.19
-
-
Wei, Z.1
Wang, W.2
Hu, P.3
Lyon, G.J.4
Hakonarson, H.5
-
120
-
-
0023652810
-
Cation specificity for sugar substrates of the melibiose carrier in Escherichia coli
-
Wilson DM, Wilson TH. 1987. Cation specificity for sugar substrates of the melibiose carrier in Escherichia coli. Biochim Biophys Acta. 904(2): 191-200.
-
(1987)
Biochim Biophys Acta
, vol.904
, Issue.2
, pp. 191-200
-
-
Wilson, D.M.1
Wilson, T.H.2
-
121
-
-
0035342615
-
Sodium-substrate cotransport in bacteria
-
Wilson TH, Ding PZ. 2001. Sodium-substrate cotransport in bacteria. Biochim Biophys Acta. 1505(1): 121-130.
-
(2001)
Biochim Biophys Acta
, vol.1505
, Issue.1
, pp. 121-130
-
-
Wilson, T.H.1
Ding, P.Z.2
-
122
-
-
0025269097
-
Specificity of Escherichia colimutD and mutL mutator strains
-
Wu TH, Clarke CH, Marinus MG. 1990. Specificity of Escherichia colimutD and mutL mutator strains. Gene 87(1): 1-5.
-
(1990)
Gene
, vol.87
, Issue.1
, pp. 1-5
-
-
Wu, T.H.1
Clarke, C.H.2
Marinus, M.G.3
-
123
-
-
0021173634
-
Nucleotide sequence of the melB gene and characteristics of deduced amino acid sequence of the melibiose carrier in Escherichia coli
-
Yazyu H, et al. 1984. Nucleotide sequence of the melB gene and characteristics of deduced amino acid sequence of the melibiose carrier in Escherichia coli. J Biol Chem. 259(7): 4320-4326.
-
(1984)
J Biol Chem
, vol.259
, Issue.7
, pp. 4320-4326
-
-
Yazyu, H.1
-
124
-
-
70350694443
-
Pindel: A pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
-
Ye K, Schulz MH, Long Q, Apweiler R, Ning Z. 2009. Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads. Bioinformatics 25(21): 2865-2871.
-
(2009)
Bioinformatics
, vol.25
, Issue.21
, pp. 2865-2871
-
-
Ye, K.1
Schulz, M.H.2
Long, Q.3
Apweiler, R.4
Ning, Z.5
-
125
-
-
0033534373
-
AcrA is a highly asymmetric protein capable of spanning the periplasm
-
Zgurskaya HI, Nikaido H. 1999. AcrA is a highly asymmetric protein capable of spanning the periplasm. J Mol Biol. 285(1): 409-420.
-
(1999)
J Mol Biol
, vol.285
, Issue.1
, pp. 409-420
-
-
Zgurskaya, H.I.1
Nikaido, H.2
-
126
-
-
0033940002
-
Cross-linked complex between oligomeric periplasmic lipoprotein AcrA and the inner-membrane-associated multidrug efflux pump AcrB from Escherichia coli
-
Zgurskaya HI, Nikaido H. 2000. Cross-linked complex between oligomeric periplasmic lipoprotein AcrA and the inner-membrane-associated multidrug efflux pump AcrB from Escherichia coli. J Bacteriol. 182(15): 4264-4267.
-
(2000)
J Bacteriol
, vol.182
, Issue.15
, pp. 4264-4267
-
-
Zgurskaya, H.I.1
Nikaido, H.2
|