-
1
-
-
0019996193
-
On the formation of spontaneous deletions: The importance of short sequence homologies in the generation of large deletions
-
Albertini, A.M., Hofer, M., Calos, M.P., and Miller, J.H. (1982) On the formation of spontaneous deletions: the importance of short sequence homologies in the generation of large deletions. Cell 29: 319-328.
-
(1982)
Cell
, vol.29
, pp. 319-328
-
-
Albertini, A.M.1
Hofer, M.2
Calos, M.P.3
Miller, J.H.4
-
2
-
-
0020300666
-
Analysis of spontaneous deletions and gene amplification in the lac region of Escherichia coli
-
Albertini, A.M., Hofer, M., Calos, M.P., Tlsty, T.D., and Miller, J.H. (1983) Analysis of spontaneous deletions and gene amplification in the lac region of Escherichia coli. Cold Spring Harb Symp Quant Biol 47: 841-850.
-
(1983)
Cold Spring Harb Symp Quant Biol
, vol.47
, pp. 841-850
-
-
Albertini, A.M.1
Hofer, M.2
Calos, M.P.3
Tlsty, T.D.4
Miller, J.H.5
-
3
-
-
0018236853
-
Tandem genetic duplications in Salmonella typhimurium: Amplification of the histidine operon
-
Anderson, R.P., and Roth, J.R. (1978) Tandem genetic duplications in Salmonella typhimurium: amplification of the histidine operon. J Mol Biol 126: 53-71.
-
(1978)
J Mol Biol
, vol.126
, pp. 53-71
-
-
Anderson, R.P.1
Roth, J.R.2
-
4
-
-
0345686682
-
Extensive repetitive DNA facilitates prokaryotic genome plasticity
-
Aras, R.A., Kang, J., Tschumi, A.I., Harasaki, Y., and Blaser, M.J. (2003a) Extensive repetitive DNA facilitates prokaryotic genome plasticity. Proc Natl Acad Sci USA 100: 13579-13584.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 13579-13584
-
-
Aras, R.A.1
Kang, J.2
Tschumi, A.I.3
Harasaki, Y.4
Blaser, M.J.5
-
5
-
-
0242526249
-
Plasticity of repetitive DNA sequences within a bacterial (type IV) secretion system component
-
Aras, R.A., Fischer, W., Perez-Perez, G.I., Crosatti, M., Ando, T., Haas, R., and Blaser, M.J. (2003b) Plasticity of repetitive DNA sequences within a bacterial (type IV) secretion system component. J Exp Med 198: 1349-1360.
-
(2003)
J Exp Med
, vol.198
, pp. 1349-1360
-
-
Aras, R.A.1
Fischer, W.2
Perez-Perez, G.I.3
Crosatti, M.4
Ando, T.5
Haas, R.6
Blaser, M.J.7
-
6
-
-
0042943204
-
Natural variation in populations of persistently colonizing bacteria affect human host cell phenotype
-
Aras, R.A., Lee, Y., Kim, S.K., Israel, D., Peek, R.M., Jr, and Blaser, M.J. (2003c) Natural variation in populations of persistently colonizing bacteria affect human host cell phenotype. J Infect Dis 188: 486-496.
-
(2003)
J Infect Dis
, vol.188
, pp. 486-496
-
-
Aras, R.A.1
Lee, Y.2
Kim, S.K.3
Israel, D.4
Peek Jr., R.M.5
Blaser, M.J.6
-
7
-
-
0035140846
-
DNA circle formation in Neisseria gonorrhoeae: A possible intermediate in diverse genomic recombination processes
-
Barten, R., and Meyer, T.F. (2001) DNA circle formation in Neisseria gonorrhoeae: a possible intermediate in diverse genomic recombination processes. Mol Gen Genet 264: 691-701.
-
(2001)
Mol Gen Genet
, vol.264
, pp. 691-701
-
-
Barten, R.1
Meyer, T.F.2
-
8
-
-
0035107767
-
The simple sequence contingency loci of Haemophilus influenzae and Neisseria meningitidis
-
Bayliss, C.D., Field, D., and Moxon, E.R. (2001) The simple sequence contingency loci of Haemophilus influenzae and Neisseria meningitidis. J Clin Invest 107: 657-662.
-
(2001)
J Clin Invest
, vol.107
, pp. 657-662
-
-
Bayliss, C.D.1
Field, D.2
Moxon, E.R.3
-
9
-
-
0031838719
-
Short-sequence DNA repeats in prokaryotic genomes
-
van Belkum, A., Scherer, S., van Alphen, L., and Verbrugh, H. (1998) Short-sequence DNA repeats in prokaryotic genomes. Microbiol Mol Biol Rev 62: 275-293.
-
(1998)
Microbiol Mol Biol Rev
, vol.62
, pp. 275-293
-
-
Van Belkum, A.1
Scherer, S.2
Van Alphen, L.3
Verbrugh, H.4
-
10
-
-
0033389541
-
Occurrence and structure-function relationship of pentameric short sequence repeats in microbial genomes
-
van Belkum, A., van Leeuwen, W., Scherer, S., and Verbrugh, H. (1999) Occurrence and structure-function relationship of pentameric short sequence repeats in microbial genomes. Res Microbiol 150: 617-626.
-
(1999)
Res Microbiol
, vol.150
, pp. 617-626
-
-
Van Belkum, A.1
Van Leeuwen, W.2
Scherer, S.3
Verbrugh, H.4
-
11
-
-
0028089097
-
recA-independent and recA-dependent intramolecular plasmid recombination. Differential homology requirement and distance effect
-
Bi, X., and Liu, L.F. (1994) recA-independent and recA-dependent intramolecular plasmid recombination. Differential homology requirement and distance effect. J Mol Biol 235: 414-423.
-
(1994)
J Mol Biol
, vol.235
, pp. 414-423
-
-
Bi, X.1
Liu, L.F.2
-
12
-
-
0028925264
-
Specific stimulation of recA-independent plasmid recombination by a DNA sequence at a distance
-
Bi, X., Lyu, Y.L., and Liu, L.F. (1995) Specific stimulation of recA-independent plasmid recombination by a DNA sequence at a distance. J Mol Biol 247: 890-902.
-
(1995)
J Mol Biol
, vol.247
, pp. 890-902
-
-
Bi, X.1
Lyu, Y.L.2
Liu, L.F.3
-
13
-
-
0001158989
-
DNA inverted repeats and human disease
-
Bissler, J.J. (1998) DNA inverted repeats and human disease. Front Biosci 3: d408-418.
-
(1998)
Front Biosci
, vol.3
-
-
Bissler, J.J.1
-
14
-
-
0035107219
-
Replication mutations differentially enhance RecA-dependent and RecA-independent recombination between tandem repeats in Bacillus subtilis
-
Bruand, C., Bidnenko, V., and Ehrlich, S.D. (2001) Replication mutations differentially enhance RecA-dependent and RecA-independent recombination between tandem repeats in Bacillus subtilis. Mol Microbiol 39: 1248-1258.
-
(2001)
Mol Microbiol
, vol.39
, pp. 1248-1258
-
-
Bruand, C.1
Bidnenko, V.2
Ehrlich, S.D.3
-
15
-
-
0035902443
-
Instability of repetitive DNA sequences: The role of replication in multiple mechanisms
-
Bzymek, M., and Lovett, S.T. (2001a) Instability of repetitive DNA sequences: the role of replication in multiple mechanisms. Proc Natl Acad Sci USA 98: 8319-8325.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8319-8325
-
-
Bzymek, M.1
Lovett, S.T.2
-
16
-
-
0034967389
-
Evidence for two mechanisms of palindrome-stimulated deletion in Escherichia coli: Single-strand annealing and replication slipped mispairing
-
Bzymek, M., and Lovett, S.T. (2001b) Evidence for two mechanisms of palindrome-stimulated deletion in Escherichia coli: Single-strand annealing and replication slipped mispairing. Genetics 158: 527-540.
-
(2001)
Genetics
, vol.158
, pp. 527-540
-
-
Bzymek, M.1
Lovett, S.T.2
-
17
-
-
0032925369
-
Slipped misalignment mechanisms of deletion formation: In vivo susceptibility to nucleases
-
Bzymek, M., Saveson, C.J., Feschenko, V.V., and Lovett, S.T. (1999) Slipped misalignment mechanisms of deletion formation: in vivo susceptibility to nucleases. J Bacteriol 181: 477-482.
-
(1999)
J Bacteriol
, vol.181
, pp. 477-482
-
-
Bzymek, M.1
Saveson, C.J.2
Feschenko, V.V.3
Lovett, S.T.4
-
18
-
-
0033600752
-
Replication slippage of different DNA polymerases is inversely related to their strand displacement efficiency
-
Canceill, D., Viguera, E., and Ehrlich, S.D. (1999) Replication slippage of different DNA polymerases is inversely related to their strand displacement efficiency. J Biol Chem 274: 27481-27490.
-
(1999)
J Biol Chem
, vol.274
, pp. 27481-27490
-
-
Canceill, D.1
Viguera, E.2
Ehrlich, S.D.3
-
19
-
-
0021111727
-
IS1-mediated tandem duplication of plasmid pBR322. Dependence on recA and on DNA polymerase I
-
Chandler, M., and Galas, D.J. (1983) IS1-mediated tandem duplication of plasmid pBR322. Dependence on recA and on DNA polymerase I. J Mol Biol 165: 183-190.
-
(1983)
J Mol Biol
, vol.165
, pp. 183-190
-
-
Chandler, M.1
Galas, D.J.2
-
20
-
-
0028307745
-
Frequency of deletion formation decreases exponentially with distance between short direct repeats
-
Chedin, F., Dervyn, E., Dervyn, R., Ehrlich, S.D., and Noirot, P. (1994) Frequency of deletion formation decreases exponentially with distance between short direct repeats. Mol Microbiol 12: 561-569.
-
(1994)
Mol Microbiol
, vol.12
, pp. 561-569
-
-
Chedin, F.1
Dervyn, E.2
Dervyn, R.3
Ehrlich, S.D.4
Noirot, P.5
-
21
-
-
0034595010
-
The importance of repairing stalled replication forks
-
Cox, M.M., Goodman, M.F., Kreuzer, K.N., Sherratt, D.J., Sandler, S.J., and Marians, K.J. (2000) The importance of repairing stalled replication forks. Nature 404: 37-41.
-
(2000)
Nature
, vol.404
, pp. 37-41
-
-
Cox, M.M.1
Goodman, M.F.2
Kreuzer, K.N.3
Sherratt, D.J.4
Sandler, S.J.5
Marians, K.J.6
-
22
-
-
0025339237
-
A set of lacZ mutations in Escherichia coli that allow rapid detection of specific frameshift mutations
-
Cupples, C.G., Cabrera, M., Cruz, C., and Miller, J.H. (1990) A set of lacZ mutations in Escherichia coli that allow rapid detection of specific frameshift mutations. Genetics 125: 275-280.
-
(1990)
Genetics
, vol.125
, pp. 275-280
-
-
Cupples, C.G.1
Cabrera, M.2
Cruz, C.3
Miller, J.H.4
-
23
-
-
0025812665
-
Molecular mechanisms of deletion formation in Escherichia coli plasmids. I. Deletion formation mediated by long direct repeats
-
Dianov, G.L., Kuzminov, A.V., Mazin, A.V., and Salganik, R.I. (1991) Molecular mechanisms of deletion formation in Escherichia coli plasmids. I. Deletion formation mediated by long direct repeats. Mol Gen Genet 228: 153-159.
-
(1991)
Mol Gen Genet
, vol.228
, pp. 153-159
-
-
Dianov, G.L.1
Kuzminov, A.V.2
Mazin, A.V.3
Salganik, R.I.4
-
24
-
-
0019723857
-
Recombination between short DNA homologies causes tandem duplication
-
Edlund, T., and Normark, S. (1981) Recombination between short DNA homologies causes tandem duplication. Nature 292: 269-271.
-
(1981)
Nature
, vol.292
, pp. 269-271
-
-
Edlund, T.1
Normark, S.2
-
25
-
-
0018242793
-
Genetic studies of the lac repressor. VII. On the molecular nature of spontaneous hotspots in the lacl gene of Escherichia coli
-
Farabaugh, P.J., Schmeissner, U., Hofer, M., and Miller, J.H. (1978) Genetic studies of the lac repressor. VII. On the molecular nature of spontaneous hotspots in the lacl gene of Escherichia coli. J Mol Biol 126: 847-857.
-
(1978)
J Mol Biol
, vol.126
, pp. 847-857
-
-
Farabaugh, P.J.1
Schmeissner, U.2
Hofer, M.3
Miller, J.H.4
-
26
-
-
0032570754
-
Slipped misalignment mechanisms of deletion formation: Analysis of deletion endpoints
-
Feschenko, V.V., and Lovett, S.T. (1998) Slipped misalignment mechanisms of deletion formation: analysis of deletion endpoints. J Mol Biol 276: 559-569.
-
(1998)
J Mol Biol
, vol.276
, pp. 559-569
-
-
Feschenko, V.V.1
Lovett, S.T.2
-
27
-
-
0037417799
-
Stabilization of perfect and imperfect tandem repeats by single-strand DNA exonucleases
-
Feschenko, V.V., Rajman, L.A., and Lovett, S.T. (2003) Stabilization of perfect and imperfect tandem repeats by single-strand DNA exonucleases. Proc Natl Acad Sci USA 100: 1134-1139.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 1134-1139
-
-
Feschenko, V.V.1
Rajman, L.A.2
Lovett, S.T.3
-
28
-
-
0016292997
-
Mutational specificity of a conditional Escherichia coli mutator mutD5
-
Fowler, R.G., Degnen, G.E., and Cox, E.C. (1974) Mutational specificity of a conditional Escherichia coli mutator mutD5. Mol Gen Genet 133: 179-191.
-
(1974)
Mol Gen Genet
, vol.133
, pp. 179-191
-
-
Fowler, R.G.1
Degnen, G.E.2
Cox, E.C.3
-
29
-
-
0022483073
-
Characterization of mutational specificity within the lacl gene for a mutD5 mutator strain of Escherichia coli defective in 3′-5′ exonuclease (proofreading) activity
-
Fowler, R.G., Schaaper, R.M., and Glickman, B.W. (1986) Characterization of mutational specificity within the lacl gene for a mutD5 mutator strain of Escherichia coli defective in 3′-5′ exonuclease (proofreading) activity. J Bacteriol 167: 130-137.
-
(1986)
J Bacteriol
, vol.167
, pp. 130-137
-
-
Fowler, R.G.1
Schaaper, R.M.2
Glickman, B.W.3
-
30
-
-
0001701221
-
Illegitimate recombination
-
Hershey, A.D. (ed.). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Franklin, N. (1971) Illegitimate recombination. In The Bacteriophage Lambda. Hershey, A.D. (ed.). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, pp. 175-194.
-
(1971)
The Bacteriophage Lambda
, pp. 175-194
-
-
Franklin, N.1
-
31
-
-
0034049514
-
The consequences of growth of a mutator strain of Escherichia coli as measured by loss of function among multiple gene targets and loss of fitness
-
Funchain, P., Yeung, A., Stewart, J.L., Lin, R., Slupska, M.M., and Miller, J.H. (2000) The consequences of growth of a mutator strain of Escherichia coli as measured by loss of function among multiple gene targets and loss of fitness. Genetics 154: 959-970.
-
(2000)
Genetics
, vol.154
, pp. 959-970
-
-
Funchain, P.1
Yeung, A.2
Stewart, J.L.3
Lin, R.4
Slupska, M.M.5
Miller, J.H.6
-
32
-
-
0022499585
-
Effect of a recA mutation on cholera toxin gene amplification and deletion events
-
Goldberg, I., and Mekalanos, J.J. (1986) Effect of a recA mutation on cholera toxin gene amplification and deletion events. J Bacteriol 165: 723-731.
-
(1986)
J Bacteriol
, vol.165
, pp. 723-731
-
-
Goldberg, I.1
Mekalanos, J.J.2
-
33
-
-
0034703711
-
Adaptive amplification: An inducible chromosomal instability mechanism
-
Hastings, P.J., Bull, H.J., Klump, J.R., and Rosenberg, S.M. (2000) Adaptive amplification: an inducible chromosomal instability mechanism. Cell 103: 723-731.
-
(2000)
Cell
, vol.103
, pp. 723-731
-
-
Hastings, P.J.1
Bull, H.J.2
Klump, J.R.3
Rosenberg, S.M.4
-
34
-
-
0037133168
-
Amplification-mutagenesis: Evidence that 'directed' adaptive mutation and general hypermutability result from growth with a selected gene amplification
-
Hendrickson, H., Slechta, E.S., Bergthorsson, U., Andersson, D.I., and Roth, J.R. (2002) Amplification-mutagenesis: evidence that 'directed' adaptive mutation and general hypermutability result from growth with a selected gene amplification. Proc Natl Acad Sci USA 99: 2164-2169.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 2164-2169
-
-
Hendrickson, H.1
Slechta, E.S.2
Bergthorsson, U.3
Andersson, D.I.4
Roth, J.R.5
-
35
-
-
0029746160
-
DNA repeats identify novel virulence genes in Haemophilus influenzae
-
Hood, D.W., Deadman, M.E., Jennings, M.P., Bisercic, M., Fleischmann, R.D., Venter, J.C., and Moxon, E.R. (1996) DNA repeats identify novel virulence genes in Haemophilus influenzae. Proc Natl Acad Sci USA 93: 11121-11125.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 11121-11125
-
-
Hood, D.W.1
Deadman, M.E.2
Jennings, M.P.3
Bisercic, M.4
Fleischmann, R.D.5
Venter, J.C.6
Moxon, E.R.7
-
36
-
-
0021229671
-
Transition of deletion mutants of the composite resistance plasmid NR1 in Escherichia coli and Salmonella typhimurium
-
Huffman, G.A., and Rownd, R.H. (1984) Transition of deletion mutants of the composite resistance plasmid NR1 in Escherichia coli and Salmonella typhimurium. J Bacteriol 159: 488-498.
-
(1984)
J Bacteriol
, vol.159
, pp. 488-498
-
-
Huffman, G.A.1
Rownd, R.H.2
-
37
-
-
0026021682
-
Phase variation of gonococcal pili by frameshift mutation in pilC, a novel gene for pilus assembly
-
Jonsson, A.B., Nyberg, G., and Normark, S. (1991) Phase variation of gonococcal pili by frameshift mutation in pilC, a novel gene for pilus assembly. EMBO J 10: 477-488.
-
(1991)
EMBO J
, vol.10
, pp. 477-488
-
-
Jonsson, A.B.1
Nyberg, G.2
Normark, S.3
-
38
-
-
0025109103
-
Misalignment-mediated DNA synthesis errors
-
Kunkel, T.A. (1990) Misalignment-mediated DNA synthesis errors. Biochemistry 29: 8003-8011.
-
(1990)
Biochemistry
, vol.29
, pp. 8003-8011
-
-
Kunkel, T.A.1
-
39
-
-
0023790391
-
Mutagenesis by transient misalignment
-
Kunkel, T.A., and Soni, A. (1988) Mutagenesis by transient misalignment. J Biol Chem 263: 14784-14789.
-
(1988)
J Biol Chem
, vol.263
, pp. 14784-14789
-
-
Kunkel, T.A.1
Soni, A.2
-
40
-
-
0021112633
-
Site-specific pausing of deoxyribonucleic acid synthesis catalyzed by four forms of Escherichia coli DNA polymerase III
-
LaDuca, R.J., Fay, P.J., Chuang, C., McHenry, C.S., and Bambara, R.A. (1983) Site-specific pausing of deoxyribonucleic acid synthesis catalyzed by four forms of Escherichia coli DNA polymerase III. Biochemistry 22: 5177-5188.
-
(1983)
Biochemistry
, vol.22
, pp. 5177-5188
-
-
Laduca, R.J.1
Fay, P.J.2
Chuang, C.3
McHenry, C.S.4
Bambara, R.A.5
-
41
-
-
0028674914
-
Long DNA palindromes, cruciform structures, genetic instability and secondary structure repair
-
Leach, D.R. (1994) Long DNA palindromes, cruciform structures, genetic instability and secondary structure repair. Bioassays 16: 893-900.
-
(1994)
Bioassays
, vol.16
, pp. 893-900
-
-
Leach, D.R.1
-
42
-
-
0029949084
-
Stabilization of diverged tandem repeats by mismatch repair: Evidence for deletion formation via a misaligned replication intermediate
-
Lovett, S.T., and Feschenko, V.V. (1996) Stabilization of diverged tandem repeats by mismatch repair: evidence for deletion formation via a misaligned replication intermediate. Proc Natl Acad Sci USA 93: 7120-7124.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 7120-7124
-
-
Lovett, S.T.1
Feschenko, V.V.2
-
43
-
-
0027420692
-
A sister-strand exchange mechanism for recA-independent deletion of repeated DNA sequences in Escherichia coli
-
Lovett, S.T., Drapkin, P.T., Sutera, V.A., Jr, and Gluckman-Peskind, T.J. (1993) A sister-strand exchange mechanism for recA-independent deletion of repeated DNA sequences in Escherichia coli. Genetics 135: 631-642.
-
(1993)
Genetics
, vol.135
, pp. 631-642
-
-
Lovett, S.T.1
Drapkin, P.T.2
Sutera Jr., V.A.3
Gluckman-Peskind, T.J.4
-
44
-
-
0028088757
-
Recombination between repeats in Escherichia coli by a recA- Independent, proximity-sensitive mechanism
-
Lovett, S.T., Gluckman, T.J., Simon, P.J., Sutera, V.A., Jr, and Drapkin, P.T. (1994) Recombination between repeats in Escherichia coli by a recA- independent, proximity-sensitive mechanism. Mol Gen Genet 245: 294-300.
-
(1994)
Mol Gen Genet
, vol.245
, pp. 294-300
-
-
Lovett, S.T.1
Gluckman, T.J.2
Simon, P.J.3
Sutera Jr., V.A.4
Drapkin, P.T.5
-
45
-
-
0025897153
-
Phase variation of the opacity outer membrane protein controls invasion by Neisseria gonorrhoeae into human epithelial cells
-
Makino, S., van Putten, J.P., and Meyer, T.F. (1991) Phase variation of the opacity outer membrane protein controls invasion by Neisseria gonorrhoeae into human epithelial cells. EMBO J 10: 1307-1315.
-
(1991)
EMBO J
, vol.10
, pp. 1307-1315
-
-
Makino, S.1
Van Putten, J.P.2
Meyer, T.F.3
-
46
-
-
0018305886
-
Repetition of tetracycline resistance determinant genes on R plasmid pRSD1 in Escherichia coli
-
Mattes, R., Burkardt, H.J., and Schmitt, R. (1979) Repetition of tetracycline resistance determinant genes on R plasmid pRSD1 in Escherichia coli. Mol Gen Genet 168: 173-184.
-
(1979)
Mol Gen Genet
, vol.168
, pp. 173-184
-
-
Mattes, R.1
Burkardt, H.J.2
Schmitt, R.3
-
47
-
-
0025816222
-
Mechanisms of deletion formation in Escherichia coli plasmids. II. Deletions mediated by short direct repeats
-
Mazin, A.V., Kuzminov, A.V., Dianov, G.L., and Salganik, R.I. (1991) Mechanisms of deletion formation in Escherichia coli plasmids. II. Deletions mediated by short direct repeats. Mol Gen Genet 228: 209-214.
-
(1991)
Mol Gen Genet
, vol.228
, pp. 209-214
-
-
Mazin, A.V.1
Kuzminov, A.V.2
Dianov, G.L.3
Salganik, R.I.4
-
48
-
-
0021033756
-
Duplication and amplification of toxin genes in Vibrio cholerae
-
Mekalanos, J.J. (1983) Duplication and amplification of toxin genes in Vibrio cholerae. Cell 35: 253-263.
-
(1983)
Cell
, vol.35
, pp. 253-263
-
-
Mekalanos, J.J.1
-
49
-
-
0026318458
-
Mutational specificity of the dnaE173 mutator associated with a defect in the catalytic subunit of DNA polymerase III of Escherichia coli
-
Mo, J.Y., Maki, H., and Sekiguchi, M. (1991) Mutational specificity of the dnaE173 mutator associated with a defect in the catalytic subunit of DNA polymerase III of Escherichia coli. J Mol Biol 222: 925-936.
-
(1991)
J Mol Biol
, vol.222
, pp. 925-936
-
-
Mo, J.Y.1
Maki, H.2
Sekiguchi, M.3
-
50
-
-
0001386998
-
Expansion of DNA repeats in Escherichia coli: Effects of recombination and replication functions
-
Morag, A.S., Saveson, C.J., and Lovett, S.T. (1999) Expansion of DNA repeats in Escherichia coli: effects of recombination and replication functions. J Mol Biol 289: 21-27.
-
(1999)
J Mol Biol
, vol.289
, pp. 21-27
-
-
Morag, A.S.1
Saveson, C.J.2
Lovett, S.T.3
-
51
-
-
0019411348
-
Mutations that detoxify an aberrant T4 membrane protein
-
Nelson, M.A., Singer, B.S., Gold, L., and Pribnow, D. (1981) Mutations that detoxify an aberrant T4 membrane protein. J Mol Biol 149: 377-403.
-
(1981)
J Mol Biol
, vol.149
, pp. 377-403
-
-
Nelson, M.A.1
Singer, B.S.2
Gold, L.3
Pribnow, D.4
-
52
-
-
0025998864
-
An in vitro approach to identifying specificity determinants of mutagenesis mediated by DNA misalignments
-
Papanicolaou, C., and Ripley, L.S. (1991) An in vitro approach to identifying specificity determinants of mutagenesis mediated by DNA misalignments. J Mol Biol 221: 805-821.
-
(1991)
J Mol Biol
, vol.221
, pp. 805-821
-
-
Papanicolaou, C.1
Ripley, L.S.2
-
53
-
-
0026536644
-
Repair of DNA heteroduplexes containing small heterologous sequences in Escherichia coli
-
Parker, B.O., and Marinus, M.G. (1992) Repair of DNA heteroduplexes containing small heterologous sequences in Escherichia coli. Proc Natl Acad Sci USA 89: 1730-1734.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 1730-1734
-
-
Parker, B.O.1
Marinus, M.G.2
-
54
-
-
0025862207
-
The effect of the length of direct repeats and the presence of palindromes on deletion between directly repeated DNA sequences in bacteriophage T7
-
Pierce, J.C., Kong, D., and Masker, W. (1991) The effect of the length of direct repeats and the presence of palindromes on deletion between directly repeated DNA sequences in bacteriophage T7. Nucleic Acids Res 19: 3901-3905.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 3901-3905
-
-
Pierce, J.C.1
Kong, D.2
Masker, W.3
-
55
-
-
0031803630
-
Replication strand preference for deletions associated with DNA palindromes
-
Pinder, D.J., Blake, C.E., Lindsey, J.C., and Leach, D.R. (1998) Replication strand preference for deletions associated with DNA palindromes. Mol Microbiol 28: 719-727.
-
(1998)
Mol Microbiol
, vol.28
, pp. 719-727
-
-
Pinder, D.J.1
Blake, C.E.2
Lindsey, J.C.3
Leach, D.R.4
-
56
-
-
0034919223
-
Tandem repeat deletion in the alpha C protein of group B streptococcus is recA independent
-
Puopolo, K.M., Hollingshead, S.K., Carey, V.J., and Madoff, L.C. (2001) Tandem repeat deletion in the alpha C protein of group B streptococcus is recA independent. Infect Immun 69: 5037-5045.
-
(2001)
Infect Immun
, vol.69
, pp. 5037-5045
-
-
Puopolo, K.M.1
Hollingshead, S.K.2
Carey, V.J.3
Madoff, L.C.4
-
57
-
-
0019996140
-
Model for the participation of quasipalindromic DNA sequences in frameshift mutation
-
Ripley, L.S. (1982) Model for the participation of quasipalindromic DNA sequences in frameshift mutation. Proc Natl Acad Sci USA 79: 4128-4132.
-
(1982)
Proc Natl Acad Sci USA
, vol.79
, pp. 4128-4132
-
-
Ripley, L.S.1
-
58
-
-
0025630591
-
Frameshift mutation: Determinants of specificity
-
Ripley, L.S. (1990) Frameshift mutation: determinants of specificity. Annu Rev Genet 24: 189-213.
-
(1990)
Annu Rev Genet
, vol.24
, pp. 189-213
-
-
Ripley, L.S.1
-
59
-
-
0020528363
-
Mutator versus antimutator activity of a T4 DNA polymerase mutant distinguishes two different frameshifting mechanisms
-
Ripley, L.S., Glickman, B.W., and Shoemaker, N.B. (1983) Mutator versus antimutator activity of a T4 DNA polymerase mutant distinguishes two different frameshifting mechanisms. Mol Gen Genet 189: 113-117.
-
(1983)
Mol Gen Genet
, vol.189
, pp. 113-117
-
-
Ripley, L.S.1
Glickman, B.W.2
Shoemaker, N.B.3
-
60
-
-
0028837093
-
Discrete amplifiable regions (amplicons) in the symbiotic plasmid of Rhizobium etli CFN42
-
Romero, D., Martinez-Salazar, J., Girard, L., Brom, S., Davilla, G., Palacios, R., et al. (1995) Discrete amplifiable regions (amplicons) in the symbiotic plasmid of Rhizobium etli CFN42. J Bacteriol 177: 973-980.
-
(1995)
J Bacteriol
, vol.177
, pp. 973-980
-
-
Romero, D.1
Martinez-Salazar, J.2
Girard, L.3
Brom, S.4
Davilla, G.5
Palacios, R.6
-
61
-
-
0029161151
-
Differential DNA secondary structure-mediated deletion mutation in the leading and lagging strands
-
Rosche, W.A., Trinh, T.Q., and Sinden, R.R. (1995) Differential DNA secondary structure-mediated deletion mutation in the leading and lagging strands. J Bacteriol 177: 4385-4391.
-
(1995)
J Bacteriol
, vol.177
, pp. 4385-4391
-
-
Rosche, W.A.1
Trinh, T.Q.2
Sinden, R.R.3
-
62
-
-
0031556020
-
Leading strand specific spontaneous mutation corrects a quasipalindrome by an intermolecular strand switch mechanism
-
Rosche, W.A., Trinh, T.Q., and Sinden, R.R. (1997) Leading strand specific spontaneous mutation corrects a quasipalindrome by an intermolecular strand switch mechanism. J Mol Biol 269: 176-187.
-
(1997)
J Mol Biol
, vol.269
, pp. 176-187
-
-
Rosche, W.A.1
Trinh, T.Q.2
Sinden, R.R.3
-
63
-
-
0032484153
-
Primer-template misalignments during leading strand DNA synthesis account for the most frequent spontaneous mutations in a quasipalindromic region in Escherichla coli
-
Rosche, W.A., Ripley, L.S., and Sinden, R.R. (1998) Primer-template misalignments during leading strand DNA synthesis account for the most frequent spontaneous mutations in a quasipalindromic region in Escherichla coli. J Mol Biol 284: 633-646.
-
(1998)
J Mol Biol
, vol.284
, pp. 633-646
-
-
Rosche, W.A.1
Ripley, L.S.2
Sinden, R.R.3
-
64
-
-
0031931361
-
Simple sequence repeats in the Helicobacter pylori genome
-
Saunders, N.J., Reden, J.F., Hood, D.W., and Moxon, E.R. (1998) Simple sequence repeats in the Helicobacter pylori genome. Mol Microbiol 27: 1091-1098.
-
(1998)
Mol Microbiol
, vol.27
, pp. 1091-1098
-
-
Saunders, N.J.1
Reden, J.F.2
Hood, D.W.3
Moxon, E.R.4
-
65
-
-
0000361948
-
Repeat-associated phase variable genes in the complete genome sequence of Neisseria meningitidis strain MC58
-
Saunders, N.J., Jeffries, A.C., Peden, J.F., Hood, D.W., Tettelin, H., Rappuoli, R., and Moxon, E.R. (2000) Repeat-associated phase variable genes in the complete genome sequence of Neisseria meningitidis strain MC58. Mol Microbiol 37: 207-215.
-
(2000)
Mol Microbiol
, vol.37
, pp. 207-215
-
-
Saunders, N.J.1
Jeffries, A.C.2
Peden, J.F.3
Hood, D.W.4
Tettelin, H.5
Rappuoli, R.6
Moxon, E.R.7
-
66
-
-
0030902447
-
Enhanced deletion formation by aberrant DNA replication in Escherichia coli
-
Saveson, C.J., and Lovett, S.T. (1997) Enhanced deletion formation by aberrant DNA replication in Escherichia coli. Genetics 146: 457-470.
-
(1997)
Genetics
, vol.146
, pp. 457-470
-
-
Saveson, C.J.1
Lovett, S.T.2
-
67
-
-
0346265834
-
Mechanisms of mutagenesis in the Escherichia coli mutator mutD5: Role of DNA mismatch repair
-
Schaaper, R.M. (1988) Mechanisms of mutagenesis in the Escherichia coli mutator mutD5: role of DNA mismatch repair. Proc Natl Acad Sci USA 85: 8126-3130.
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 8126-13130
-
-
Schaaper, R.M.1
-
68
-
-
0023410420
-
Spectra of spontaneous mutations in Escherichia coli strains defective in mismatch correction: The nature of in vivo DNA replication errors
-
Schaaper, R.M., and Dunn, R.L. (1987) Spectra of spontaneous mutations in Escherichia coli strains defective in mismatch correction: the nature of in vivo DNA replication errors. Proc Natl Acad Sci USA 84: 6220-6224.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 6220-6224
-
-
Schaaper, R.M.1
Dunn, R.L.2
-
69
-
-
0022446219
-
Mechanisms of spontaneous mutagenesis: An analysis of the spectrum of spontaneous mutation in the Escherichia coli lacl gene
-
Schaaper, R.M., Danforth, B.N., and Glickman, B.W. (1986) Mechanisms of spontaneous mutagenesis: an analysis of the spectrum of spontaneous mutation in the Escherichia coli lacl gene. J Mol Biol 189: 273-284.
-
(1986)
J Mol Biol
, vol.189
, pp. 273-284
-
-
Schaaper, R.M.1
Danforth, B.N.2
Glickman, B.W.3
-
70
-
-
0026352538
-
On the deletion of inverted repeated DNA in Escherichia coli: Effects of length, thermal stability, and cruciform formation in vivo
-
Sinden, R.R., Zheng, G.X., Brankamp, R.G., and Allen, K.N. (1991) On the deletion of inverted repeated DNA in Escherichia coli: effects of length, thermal stability, and cruciform formation in vivo. Genetics 129: 991-1005.
-
(1991)
Genetics
, vol.129
, pp. 991-1005
-
-
Sinden, R.R.1
Zheng, G.X.2
Brankamp, R.G.3
Allen, K.N.4
-
71
-
-
0021153579
-
Gene amplification in the lac region of E. coli
-
Tlsty, T.D., Albertini, A.M., and Miller, J.H. (1984) Gene amplification in the lac region of E. coli. Cell 37: 217-224.
-
(1984)
Cell
, vol.37
, pp. 217-224
-
-
Tlsty, T.D.1
Albertini, A.M.2
Miller, J.H.3
-
72
-
-
0026419949
-
Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli
-
Trinh, T.Q., and Sinden, R.R. (1991) Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli. Nature 352: 544-547.
-
(1991)
Nature
, vol.352
, pp. 544-547
-
-
Trinh, T.Q.1
Sinden, R.R.2
-
73
-
-
0035872937
-
Replication slippage involves DNA polymerase pausing and dissociation
-
Viguera, E., Canceill, D., and Ehrlich, S.D. (2001) Replication slippage involves DNA polymerase pausing and dissociation. EMBO J 20: 2587-2595.
-
(2001)
EMBO J
, vol.20
, pp. 2587-2595
-
-
Viguera, E.1
Canceill, D.2
Ehrlich, S.D.3
-
74
-
-
0034703487
-
A novel mutational hotspot in a natural quasipalindrome in Escherichia coli
-
Viswanathan, M., Lacirignola, J.J., Hurley, R.L., and Lovett, S.T. (2000) A novel mutational hotspot in a natural quasipalindrome in Escherichia coli. J Mol Biol 302: 553-564.
-
(2000)
J Mol Biol
, vol.302
, pp. 553-564
-
-
Viswanathan, M.1
Lacirignola, J.J.2
Hurley, R.L.3
Lovett, S.T.4
-
75
-
-
0031973808
-
Genetic instability of the Streptomyces chromosome
-
Volff, J.N., and Altenbuchner, J. (1998) Genetic instability of the Streptomyces chromosome. Mol Microbiol 27: 239-246.
-
(1998)
Mol Microbiol
, vol.27
, pp. 239-246
-
-
Volff, J.N.1
Altenbuchner, J.2
-
76
-
-
0024504891
-
Palindromy and the location of deletion endpoints in Escherichia coli
-
Weston-Hafer, K., and Berg, D.E. (1989) Palindromy and the location of deletion endpoints in Escherichia coli. Genetics 121: 651-658.
-
(1989)
Genetics
, vol.121
, pp. 651-658
-
-
Weston-Hafer, K.1
Berg, D.E.2
-
77
-
-
0024042457
-
Illegitimate recombination in an Escherichia coli plasmid: Modulation by DNA damage and a new bacterial gene
-
Yi, T.M., Stearns, D., and Demple, B. (1988) Illegitimate recombination in an Escherichia coli plasmid: modulation by DNA damage and a new bacterial gene. J Bacteriol 170: 2898-2903.
-
(1988)
J Bacteriol
, vol.170
, pp. 2898-2903
-
-
Yi, T.M.1
Stearns, D.2
Demple, B.3
-
78
-
-
0035853297
-
Directionality of DNA replication fork movement strongly affects the generation of spontaneous mutations in Escherichia coli
-
Yoshiyama, K., Higuchi, K., Matsumura, H., and Maki, H. (2001) Directionality of DNA replication fork movement strongly affects the generation of spontaneous mutations in Escherichia coli. J Mol Biol 307: 1195-1206.
-
(2001)
J Mol Biol
, vol.307
, pp. 1195-1206
-
-
Yoshiyama, K.1
Higuchi, K.2
Matsumura, H.3
Maki, H.4
|