메뉴 건너뛰기




Volumn 203, Issue 6, 2013, Pages 929-942

Higher-order unfolding of satellite heterochromatin is a consistent and early event in cell senescence

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE; SATELLITE DNA;

EID: 84891542755     PISSN: 00219525     EISSN: 15408140     Source Type: Journal    
DOI: 10.1083/jcb.201306073     Document Type: Article
Times cited : (191)

References (49)
  • 1
    • 34147182401 scopus 로고    scopus 로고
    • Remodeling of chromatin structure in senescent cells and its potential impact on tumor suppression and aging
    • Adams, P.D. 2007. Remodeling of chromatin structure in senescent cells and its potential impact on tumor suppression and aging. Gene. 397:84-93. http://dx.doi.org/10.1016/j.gene.2007.04.020
    • (2007) Gene , vol.397 , pp. 84-93
    • Adams, P.D.1
  • 2
    • 84864297655 scopus 로고    scopus 로고
    • Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation
    • Chandra, T., K. Kirschner, J.-Y. Thuret, B.D. Pope, T. Ryba, S. Newman, K. Ahmed, S.A. Samarajiwa, R. Salama, T. Carroll, et al. 2012. Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation. Mol. Cell. 47:203-214. http://dx.doi.org/10.1016/j.molcel.2012.06.010
    • (2012) Mol. Cell , vol.47 , pp. 203-214
    • Chandra, T.1    Kirschner, K.2    Thuret, J.-Y.3    Pope, B.D.4    Ryba, T.5    Newman, S.6    Ahmed, K.7    Samarajiwa, S.A.8    Salama, R.9    Carroll, T.10
  • 4
    • 26244436644 scopus 로고    scopus 로고
    • SA beta Gal staining, biomarker or delusion
    • Cristofalo, V.J. 2005. SA beta Gal staining: biomarker or delusion. Exp. Gerontol. 40:836-838. http://dx.doi.org/10.1016/j.exger.2005.08.005
    • (2005) Exp. Gerontol. , vol.40 , pp. 836-838
    • Cristofalo, V.J.1
  • 8
    • 33847412787 scopus 로고    scopus 로고
    • Nucleoplasmic lamins and their interaction partners, LAP2', Rb, and BAF, in transcriptional regulation
    • Dorner, D., J. Gotzmann, and R. Foisner. 2007. Nucleoplasmic lamins and their interaction partners, LAP2?, Rb, and BAF, in transcriptional regulation. FEBS J. 274:1362-1373. http://dx.doi.org/10.1111/j.1742-4658.2007.05695.x
    • (2007) FEBS J , vol.274 , pp. 1362-1373
    • Dorner, D.1    Gotzmann, J.2    Foisner, R.3
  • 9
    • 77249160658 scopus 로고    scopus 로고
    • Involvement of CENP-F in histone methylation
    • Du, J., Y. Li, and X. Zhu. 2010. Involvement of CENP-F in histone methylation. Acta Biochim. Biophys. Sin. (Shanghai). 42:173-176. http://dx.doi.org/10.1093/abbs/gmq001
    • (2010) Acta Biochim. Biophys. Sin. (Shanghai) , vol.42 , pp. 173-176
    • Du, J.1    Li, Y.2    Zhu, X.3
  • 10
    • 77954661906 scopus 로고    scopus 로고
    • DNA hypomethylation in cancer cells
    • Ehrlich, M. 2009. DNA hypomethylation in cancer cells. Epigenomics. 1:239- 259. http://dx.doi.org/10.2217/epi.09.33
    • (2009) Epigenomics , vol.1 , pp. 239-259
    • Ehrlich, M.1
  • 11
    • 42649130058 scopus 로고    scopus 로고
    • ICF, an immunodeficiency syndrome, DNA methyltransferase 3B involvement, chromosome anomalies, and gene dysregulation
    • Ehrlich, M., C. Sanchez, C. Shao, R. Nishiyama, J. Kehrl, R. Kuick, T. Kubota, and S.M. Hanash. 2008. ICF, an immunodeficiency syndrome: DNA methyltransferase 3B involvement, chromosome anomalies, and gene dysregulation. Autoimmunity. 41:253-271. http://dx.doi.org/10.1080/ 08916930802024202
    • (2008) Autoimmunity , vol.41 , pp. 253-271
    • Ehrlich, M.1    Sanchez, C.2    Shao, C.3    Nishiyama, R.4    Kehrl, J.5    Kuick, R.6    Kubota, T.7    Hanash, S.M.8
  • 12
    • 1242329250 scopus 로고    scopus 로고
    • 5-Aza-2'-deoxycitydine induces demethylation and up-regulates transcription of p16INK4A gene in human gastric cancer cell lines
    • Fang, J.Y., L. Yang, H.Y. Zhu, Y.X. Chen, J. Lu, R. Lu, Z.H. Cheng, and S.D. Xiao. 2004. 5-Aza-2'-deoxycitydine induces demethylation and up-regulates transcription of p16INK4A gene in human gastric cancer cell lines. Chin. Med. J. (Engl.). 117:99-103.
    • (2004) Chin. Med. J. (Engl.) , vol.117 , pp. 99-103
    • Fang, J.Y.1    Yang, L.2    Zhu, H.Y.3    Chen, Y.X.4    Lu, J.5    Lu, R.6    Cheng, Z.H.7    Xiao, S.D.8
  • 13
    • 84861673276 scopus 로고    scopus 로고
    • Lamin B1 loss is a senescence-associated biomarker
    • Freund, A., R.-M. Laberge, M. Demaria, and J. Campisi. 2012. Lamin B1 loss is a senescence-associated biomarker. Mol. Biol. Cell. 23:2066-2075. http://dx.doi.org/10.1091/mbc.E11-10-0884
    • (2012) Mol. Biol. Cell , vol.23 , pp. 2066-2075
    • Freund, A.1    Laberge, R.-M.2    Demaria, M.3    Campisi, J.4
  • 14
    • 33845687060 scopus 로고    scopus 로고
    • Loss of linker histone H1 in cellular senescence
    • Funayama, R., M. Saito, H. Tanobe, and F. Ishikawa. 2006. Loss of linker histone H1 in cellular senescence. J. Cell Biol. 175:869-880. http://dx.doi.org/10.1083/jcb.200604005
    • (2006) J. Cell Biol. , vol.175 , pp. 869-880
    • Funayama, R.1    Saito, M.2    Tanobe, H.3    Ishikawa, F.4
  • 15
    • 25144491542 scopus 로고    scopus 로고
    • Role of Rb family in the epigenetic definition of chromatin
    • Gonzalo, S., and M.A. Blasco. 2005. Role of Rb family in the epigenetic definition of chromatin. Cell Cycle. 4:752-755. http://dx.doi.org/10.4161/cc.4.6.1720
    • (2005) Cell Cycle , vol.4 , pp. 752-755
    • Gonzalo, S.1    Blasco, M.A.2
  • 17
    • 0031878686 scopus 로고    scopus 로고
    • CENP-G, a new centromeric protein that is associated with the alpha-1 satellite DNA subfamily
    • He, D., C. Zeng, K. Woods, L. Zhong, D. Turner, R.K. Busch, B.R. Brinkley, and H. Busch. 1998. CENP-G: a new centromeric protein that is associated with the alpha-1 satellite DNA subfamily. Chromosoma. 107:189-197. http://dx.doi.org/10.1007/s004120050296
    • (1998) Chromosoma , vol.107 , pp. 189-197
    • He, D.1    Zeng, C.2    Woods, K.3    Zhong, L.4    Turner, D.5    Busch, R.K.6    Brinkley, B.R.7    Busch, H.8
  • 18
    • 2442511752 scopus 로고    scopus 로고
    • Telomere shortening triggers senescence of human cells through a pathway involving ATM, p53, and p21(CIP1), but not p16(INK4a)
    • Herbig, U., W.A. Jobling, B.P.C. Chen, D.J. Chen, and J.M. Sedivy. 2004. Telomere shortening triggers senescence of human cells through a pathway involving ATM, p53, and p21(CIP1), but not p16(INK4a). Mol. Cell. 14:501-513. http://dx.doi.org/10.1016/S1097-2765(04)00256-4
    • (2004) Mol. Cell , vol.14 , pp. 501-513
    • Herbig, U.1    Jobling, W.A.2    Chen, B.P.C.3    Chen, D.J.4    Sedivy, J.M.5
  • 19
    • 1842789989 scopus 로고    scopus 로고
    • Mechanisms of cellular senescence in human and mouse cells
    • Itahana, K., J. Campisi, and G.P. Dimri. 2004. Mechanisms of cellular senescence in human and mouse cells. Biogerontology. 5:1-10. http://dx.doi.org/10.1023/B:BGEN.0000017682.96395.10
    • (2004) Biogerontology , vol.5 , pp. 1-10
    • Itahana, K.1    Campisi, J.2    Dimri, G.P.3
  • 20
    • 44949283339 scopus 로고
    • A simple, rapid technique for precise mapping of multiple sequences in two colors using a single optical filter set
    • Johnson, C.V., J.A. McNeil, K.C. Carter, and J.B. Lawrence. 1991a. A simple, rapid technique for precise mapping of multiple sequences in two colors using a single optical filter set. Genet. Anal. Tech. Appl. 8:75-76. http:// dx.doi.org/10.1016/1050-3862(91)90052-S
    • (1991) Genet. Anal. Tech. Appl. , vol.8 , pp. 75-76
    • Johnson, C.V.1    McNeil, J.A.2    Carter, K.C.3    Lawrence, J.B.4
  • 21
    • 0026303395 scopus 로고
    • Fluorescent detection of nuclear RNA and DNA, implications for genome organization
    • Johnson, C.V., R.H. Singer, and J.B. Lawrence. 1991b. Fluorescent detection of nuclear RNA and DNA: implications for genome organization. Methods Cell Biol. 35:73-99. http://dx.doi.org/10.1016/S0091-679X(08)60569-5
    • (1991) Methods Cell Biol , vol.35 , pp. 73-99
    • Johnson, C.V.1    Singer, R.H.2    Lawrence, J.B.3
  • 22
    • 77953675074 scopus 로고    scopus 로고
    • Senescent mouse cells fail to overtly regulate the HIRA histone chaperone and do not form robust Senescence Associated Heterochromatin Foci
    • Kennedy, A.L., T. McBryan, G.H. Enders, F.B. Johnson, R. Zhang, and P.D. Adams. 2010. Senescent mouse cells fail to overtly regulate the HIRA histone chaperone and do not form robust Senescence Associated Heterochromatin Foci. Cell Div. 5:16. http://dx.doi.org/10.1186/1747-1028-5-16
    • (2010) Cell Div , vol.5 , pp. 16
    • Kennedy, A.L.1    McBryan, T.2    Enders, G.H.3    Johnson, F.B.4    Zhang, R.5    Adams, P.D.6
  • 23
    • 79851493300 scopus 로고    scopus 로고
    • Senescence-associated heterochromatin foci are dispensable for cellular senescence, occur in a cell type- and insult-dependent manner and follow expression of p16(ink4a)
    • Kosar, M., J. Bartkova, S. Hubackova, Z. Hodny, J. Lukas, and J. Bartek. 2011. Senescence-associated heterochromatin foci are dispensable for cellular senescence, occur in a cell type- and insult-dependent manner and follow expression of p16(ink4a). Cell Cycle. 10:457-468. http://dx.doi.org/10.4161/cc.10.3.14707
    • (2011) Cell Cycle , vol.10 , pp. 457-468
    • Kosar, M.1    Bartkova, J.2    Hubackova, S.3    Hodny, Z.4    Lukas, J.5    Bartek, J.6
  • 25
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead, B., C. Trapnell, M. Pop, and S.L. Salzberg. 2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10:R25. http://dx.doi.org/10.1186/gb-2009-10-3-r25
    • (2009) Genome Biol , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 26
    • 0023867576 scopus 로고
    • Sensitive, high-resolution chromatin and chromosome mapping in situ, presence and orientation of two closely integrated copies of EBV in a lymphoma line
    • Lawrence, J.B., C.A. Villnave, and R.H. Singer. 1988. Sensitive, high-resolution chromatin and chromosome mapping in situ: presence and orientation of two closely integrated copies of EBV in a lymphoma line. Cell. 52:51-61. http://dx.doi.org/10.1016/0092-8674(88)90530-2
    • (1988) Cell , vol.52 , pp. 51-61
    • Lawrence, J.B.1    Villnave, C.A.2    Singer, R.H.3
  • 27
    • 0025170695 scopus 로고
    • Interphase and metaphase resolution of different distances within the human dystrophin gene
    • Lawrence, J.B., R.H. Singer, and J.A. McNeil. 1990. Interphase and metaphase resolution of different distances within the human dystrophin gene. Science. 249:928-932. http://dx.doi.org/10.1126/science.2203143
    • (1990) Science , vol.249 , pp. 928-932
    • Lawrence, J.B.1    Singer, R.H.2    McNeil, J.A.3
  • 28
    • 0024597064 scopus 로고
    • Temporal resolution and sequential expression of muscle-specific genes revealed by in situ hybridization
    • Lawrence, J.B., K. Taneja, and R.H. Singer. 1989. Temporal resolution and sequential expression of muscle-specific genes revealed by in situ hybridization. Dev. Biol. 133:235-246. http://dx.doi.org/10.1016/0012-1606(89)90314-X
    • (1989) Dev. Biol. , vol.133 , pp. 235-246
    • Lawrence, J.B.1    Taneja, K.2    Singer, R.H.3
  • 29
    • 77950650906 scopus 로고    scopus 로고
    • CENP-A reduction induces a p53-dependent cellular senescence response to protect cells from executing defective mitoses
    • Maehara, K., K. Takahashi, and S. Saitoh. 2010. CENP-A reduction induces a p53-dependent cellular senescence response to protect cells from executing defective mitoses. Mol. Cell. Biol. 30:2090-2104. http://dx.doi.org/10.1128/ MCB.01318-09
    • (2010) Mol. Cell. Biol. , vol.30 , pp. 2090-2104
    • Maehara, K.1    Takahashi, K.2    Saitoh, S.3
  • 31
    • 78349288865 scopus 로고    scopus 로고
    • Higher-order genome organization in human disease
    • Misteli, T. 2010. Higher-order genome organization in human disease. Cold Spring Harb. Perspect. Biol. 2:a000794. http://dx.doi.org/10.1101/ cshperspect.a000794
    • (2010) Cold Spring Harb. Perspect. Biol. , vol.2
    • Misteli, T.1
  • 33
    • 33746752125 scopus 로고    scopus 로고
    • A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation
    • Narita, M., M. Narita, V. Krizhanovsky, S. Nunez, A. Chicas, S.A. Hearn, M.P. Myers, and S.W. Lowe. 2006. A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation. Cell. 126:503-514. http://dx.doi.org/10.1016/j.cell.2006.05.052
    • (2006) Cell , vol.126 , pp. 503-514
    • Narita, M.1    Narita, M.2    Krizhanovsky, V.3    Nunez, S.4    Chicas, A.5    Hearn, S.A.6    Myers, M.P.7    Lowe, S.W.8
  • 34
    • 0037667702 scopus 로고    scopus 로고
    • Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular senescence
    • Narita, M., S. Nũnez, E. Heard, M. Narita, A.W. Lin, S.A. Hearn, D.L. Spector, G.J. Hannon, and S.W. Lowe. 2003. Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular senescence. Cell. 113:703-716. http://dx.doi.org/10.1016/S0092-8674(03)00401-X
    • (2003) Cell , vol.113 , pp. 703-716
    • Narita, M.1    Nũnez, S.2    Heard, E.3    Narita, M.4    Lin, A.W.5    Hearn, S.A.6    Spector, D.L.7    Hannon, G.J.8    Lowe, S.W.9
  • 35
    • 70349645266 scopus 로고    scopus 로고
    • Ageing-related chromatin defects through loss of the NURD complex
    • Pegoraro, G., N. Kubben, U. Wickert, H. Gohler, K. Hoffmann, and T. Misteli. 2009. Ageing-related chromatin defects through loss of the NURD complex. Nat. Cell Biol. 11:1261-1267. http://dx.doi.org/10.1038/ncb1971
    • (2009) Nat. Cell Biol. , vol.11 , pp. 1261-1267
    • Pegoraro, G.1    Kubben, N.2    Wickert, U.3    Gohler, H.4    Hoffmann, K.5    Misteli, T.6
  • 36
    • 17644373758 scopus 로고    scopus 로고
    • Reversal of the cellular phenotype in the premature aging disease Hutchinson-Gilford progeria syndrome
    • Scaffidi, P., and T. Misteli. 2005. Reversal of the cellular phenotype in the premature aging disease Hutchinson-Gilford progeria syndrome. Nat. Med. 11:440-445. http://dx.doi.org/10.1038/nm1204
    • (2005) Nat. Med. , vol.11 , pp. 440-445
    • Scaffidi, P.1    Misteli, T.2
  • 37
    • 33646745137 scopus 로고    scopus 로고
    • Lamin A-dependent nuclear defects in human aging
    • Scaffidi, P., and T. Misteli. 2006. Lamin A-dependent nuclear defects in human aging. Science. 312:1059-1063. http://dx.doi.org/10.1126/science.1127168
    • (2006) Science , vol.312 , pp. 1059-1063
    • Scaffidi, P.1    Misteli, T.2
  • 38
    • 78650710470 scopus 로고    scopus 로고
    • Sustained exposure to the DNA demethylating agent, 2'-deoxy-5-azacytidine, leads to apoptotic cell death in chronic myeloid leukemia by promoting differentiation, senescence, and autophagy
    • Schnekenburger, M., C. Grandjenette, J. Ghelfi, T. Karius, B. Foliguet, M. Dicato, and M. Diederich. 2011. Sustained exposure to the DNA demethylating agent, 2'-deoxy-5-azacytidine, leads to apoptotic cell death in chronic myeloid leukemia by promoting differentiation, senescence, and autophagy. Biochem. Pharmacol. 81:364-378. http://dx.doi.org/10.1016/j.bcp.2010.10.013
    • (2011) Biochem. Pharmacol. , vol.81 , pp. 364-378
    • Schnekenburger, M.1    Grandjenette, C.2    Ghelfi, J.3    Karius, T.4    Foliguet, B.5    Dicato, M.6    Diederich, M.7
  • 39
    • 84862799740 scopus 로고    scopus 로고
    • MAnorm, a robust model for quantitative comparison of ChIP-Seq data sets
    • Shao, Z., Y. Zhang, G.C. Yuan, S.H. Orkin, and D.J. Waxman. 2012. MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets. Genome Biol. 13:R16. http://dx.doi.org/10.1186/gb-2012-13-3-r16
    • (2012) Genome Biol , vol.13
    • Shao, Z.1    Zhang, Y.2    Yuan, G.C.3    Orkin, S.H.4    Waxman, D.J.5
  • 42
    • 84891550575 scopus 로고    scopus 로고
    • RepeatMasker Open-3.0. (accessed on July 1, 2013)
    • Smit, A.F.A., R. Hubley, and P. Green. 1996-2010. RepeatMasker Open-3.0. http://www.repeatmasker.org (accessed on July 1, 2013).
    • (1996)
    • Smit, A.F.A.1    Hubley, R.2    Green, P.3
  • 45
    • 33846687101 scopus 로고    scopus 로고
    • Molecular signaling and genetic pathways of senescence, its role in tumorigenesis and aging
    • Zhang, H. 2007. Molecular signaling and genetic pathways of senescence: its role in tumorigenesis and aging. J. Cell. Physiol. 210:567-574. http:// dx.doi.org/10.1002/jcp.20919
    • (2007) J. Cell. Physiol. , vol.210 , pp. 567-574
    • Zhang, H.1
  • 46
    • 10644263286 scopus 로고    scopus 로고
    • Smurf2 up-regulation activates telomeredependent senescence
    • Zhang, H., and S.N. Cohen. 2004. Smurf2 up-regulation activates telomeredependent senescence. Genes Dev. 18:3028-3040. http://dx.doi.org/10.1101/gad.1253004
    • (2004) Genes Dev , vol.18 , pp. 3028-3040
    • Zhang, H.1    Cohen, S.N.2
  • 47
    • 33947236204 scopus 로고    scopus 로고
    • Molecular dissection of formation of senescence-associated heterochromatin foci
    • Zhang, R., W. Chen, and P.D. Adams. 2007. Molecular dissection of formation of senescence-associated heterochromatin foci. Mol. Cell. Biol. 27:2343-2358. http://dx.doi.org/10.1128/MCB.02019-06
    • (2007) Mol. Cell. Biol. , vol.27 , pp. 2343-2358
    • Zhang, R.1    Chen, W.2    Adams, P.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.