-
1
-
-
84874948475
-
A threshold mechanism mediates p53 cell fate decision between growth arrest and apoptosis
-
M. Kracikova A threshold mechanism mediates p53 cell fate decision between growth arrest and apoptosis Cell Death Differ. 20 2013 576 588
-
(2013)
Cell Death Differ.
, vol.20
, pp. 576-588
-
-
Kracikova, M.1
-
2
-
-
71049189091
-
Modelling physiological and pharmacological control on cell proliferation to optimise cancer treatments
-
J. Clairambault Modelling physiological and pharmacological control on cell proliferation to optimise cancer treatments Math. Model. Nat. Phenom. 4 2009 12 67
-
(2009)
Math. Model. Nat. Phenom.
, vol.4
, pp. 12-67
-
-
Clairambault, J.1
-
3
-
-
84890120172
-
Physiologically structured cell population dynamic models with applications to combined drug delivery optimisation in oncology
-
M. Bachar, J. Batzel, M. Chaplain, Springer New York (submitted for publication, preprint available from)
-
J. Clairambault, and O. Fercoq Physiologically structured cell population dynamic models with applications to combined drug delivery optimisation in oncology M. Bachar, J. Batzel, M. Chaplain, Mathematical modelling of cancer growth and treatment 2013 Springer New York (submitted for publication, preprint available from http://hal.archives-ouvertes.fr/hal-00750633)
-
(2013)
Mathematical Modelling of Cancer Growth and Treatment
-
-
Clairambault, J.1
Fercoq, O.2
-
4
-
-
50149097809
-
A complex barcode underlies the heterogeneous response of p53 to stress
-
F. Murray-Zmijewski, E.A. Slee, and X. Lu A complex barcode underlies the heterogeneous response of p53 to stress Nat. Rev. Mol. Cell Biol. 9 2008 702 712
-
(2008)
Nat. Rev. Mol. Cell Biol.
, vol.9
, pp. 702-712
-
-
Murray-Zmijewski, F.1
Slee, E.A.2
Lu, X.3
-
6
-
-
84867211410
-
A spatial physiological model for p53 intracellular dynamics
-
L. Dimitrio, J. Clairambault, and R. Natalini A spatial physiological model for p53 intracellular dynamics J. Theor. Biol. 316 2013 9 24
-
(2013)
J. Theor. Biol.
, vol.316
, pp. 9-24
-
-
Dimitrio, L.1
Clairambault, J.2
Natalini, R.3
-
8
-
-
25144469291
-
The Mre11/Rad50/Nbs1 complex and its role as a DNA double-strand break sensor for ATM
-
T.T. Paull, and J.H. Lee The Mre11/Rad50/Nbs1 complex and its role as a DNA double-strand break sensor for ATM Cell Cycle 4 6 2005 737 740 (Pubitemid 41353819)
-
(2005)
Cell Cycle
, vol.4
, Issue.6
, pp. 737-740
-
-
Paull, T.T.1
Lee, J.-H.2
-
9
-
-
72449164580
-
Circadian timing in cancer treatments
-
F. Lévi, A. Okyar, S. Dulong, P.F. Innominato, and J. Clairambault Circadian timing in cancer treatments Annu. Rev. Pharmacol. Toxicol. 50 2010 377 421
-
(2010)
Annu. Rev. Pharmacol. Toxicol.
, vol.50
, pp. 377-421
-
-
Lévi, F.1
Okyar, A.2
Dulong, S.3
Innominato, P.F.4
Clairambault, J.5
-
10
-
-
80053440288
-
A combined experimental and mathematical approach for molecular-based optimization of irinotecan circadian delivery
-
10.1371/journal.pcbi.1002143
-
A. Ballesta, S. Dulong, C. Abbara, B. Cohen, A. Okyar, J. Clairambault, and F. Lévi A combined experimental and mathematical approach for molecular-based optimization of irinotecan circadian delivery PLoS Comput. Biol. 7 9 2011 e1002143 10.1371/journal.pcbi.1002143
-
(2011)
PLoS Comput. Biol.
, vol.7
, Issue.9
, pp. 1002143
-
-
Ballesta, A.1
Dulong, S.2
Abbara, C.3
Cohen, B.4
Okyar, A.5
Clairambault, J.6
Lévi, F.7
-
11
-
-
85016443784
-
A systems biomedicine approach for chronotherapeutics optimization: Focus on the anticancer drug irinotecan
-
A. d'Onofrio, P. Cerrai, A. Gandolfi, Springer New York
-
A. Ballesta, J. Clairambault, S. Dulong, and F. Lévi A systems biomedicine approach for chronotherapeutics optimization: focus on the anticancer drug irinotecan A. d'Onofrio, P. Cerrai, A. Gandolfi, New Challenges for Cancer Systems Biomedicine, Part V, SIMAI Lecture Notes 2012 Springer New York 301 327
-
(2012)
New Challenges for Cancer Systems Biomedicine, Part V, SIMAI Lecture Notes
, pp. 301-327
-
-
Ballesta, A.1
Clairambault, J.2
Dulong, S.3
Lévi, F.4
-
12
-
-
84874678164
-
Designing proliferating cell population models with functional targets for control by anti-cancer drugs
-
F. Billy, and J. Clairambault Designing proliferating cell population models with functional targets for control by anti-cancer drugs DCDS-B 18 2013 865 889
-
(2013)
DCDS-B
, vol.18
, pp. 865-889
-
-
Billy, F.1
Clairambault, J.2
-
13
-
-
84868633053
-
Treatment-induced damage to the tumor microenvironment promotes prostate cancer therapy resistance through WNT16B
-
Y. Sun Treatment-induced damage to the tumor microenvironment promotes prostate cancer therapy resistance through WNT16B Nat. Med. 18 2012 1359 1368
-
(2012)
Nat. Med.
, vol.18
, pp. 1359-1368
-
-
Sun, Y.1
-
14
-
-
42949171936
-
Recurrent initiation: A mechanism for triggering p53 pulses in response to dna damage
-
DOI 10.1016/j.molcel.2008.03.016, PII S1097276508002402
-
E. Batchelor Recurrent initiation: a mechanism for triggering p53 pulses in response to DNA damage Mol. Cell 30 2008 277 289 (Pubitemid 351615316)
-
(2008)
Molecular Cell
, vol.30
, Issue.3
, pp. 277-289
-
-
Batchelor, E.1
Mock, C.S.2
Bhan, I.3
Loewer, A.4
Lahav, G.5
-
15
-
-
33748150967
-
Wip phosphatase modulates atm-dependent signaling pathways
-
DOI 10.1016/j.molcel.2006.07.010, PII S1097276506004904
-
S. Shreeram Wip1 phosphatase modulates ATM-dependent signaling pathways Mol. Cell 23 2006 757 764 (Pubitemid 44308587)
-
(2006)
Molecular Cell
, vol.23
, Issue.5
, pp. 757-764
-
-
Shreeram, S.1
Demidov, O.N.2
Hee, W.K.3
Yamaguchi, H.4
Onishi, N.5
Kek, C.6
Timofeev, O.N.7
Dudgeon, C.8
Fornace, A.J.9
Anderson, C.W.10
Minami, Y.11
Appella, E.12
Bulavin, D.V.13
-
16
-
-
33845893896
-
Regulation of ATM/p53-dependent suppression of myc-induced lymphomas by Wip1 phosphatase
-
DOI 10.1084/jem.20061563
-
S. Shreeram Regulation of ATM/p53-dependent suppression of myc-induced lymphomas by Wip1 phosphatase J. Exp. Med. 203 2006 2793 2799 (Pubitemid 46026157)
-
(2006)
Journal of Experimental Medicine
, vol.203
, Issue.13
, pp. 2793-2799
-
-
Shreeram, S.1
Weng, K.H.2
Demidov, O.N.3
Kek, C.4
Yamaguchi, H.5
Fornace Jr., A.J.6
Anderson, C.W.7
Appella, E.8
Bulavin, D.V.9
-
17
-
-
0842332406
-
Dynamics of the p53-Mdm2 feedback loop in individual cells
-
DOI 10.1038/ng1293
-
G. Lahav Dynamics of the p53-Mdm2 feedback loop in individual cells Nat. Genet. 36 2004 147 150 (Pubitemid 38174372)
-
(2004)
Nature Genetics
, vol.36
, Issue.2
, pp. 147-150
-
-
Lahav, G.1
Rosenfeld, N.2
Sigal, A.3
Geva-Zatorsky, N.4
Levine, A.J.5
Elowitz, M.B.6
Alon, U.7
-
18
-
-
33745451921
-
Oscillations and variability in the p53 system
-
N. Geva-Zatorsky Oscillations and variability in the p53 system Mol. Syst. Biol. 2 2006 1 13
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 1-13
-
-
Geva-Zatorsky, N.1
-
19
-
-
0034633702
-
Generation of oscillation by the p53-Mdm2 feedback loop: A theoretical and experimental study
-
R. Lev Bar-Or Generation of oscillation by the p53-Mdm2 feedback loop: a theoretical and experimental study Proc. Natl. Acad. Sci. U. S. A. 97 2000 11250 11255
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 11250-11255
-
-
Lev Bar-Or, R.1
-
20
-
-
65949083750
-
Cytoplasmic functions of the tumour suppressor p53
-
D.R. Green, and G. Kroemer Cytoplasmic functions of the tumour suppressor p53 Nature 458 2009 1127 1130
-
(2009)
Nature
, vol.458
, pp. 1127-1130
-
-
Green, D.R.1
Kroemer, G.2
-
21
-
-
52449114574
-
Ataxia-telangiectasia: From a rare disorder to a paradigm for cell signalling and cancer
-
M.F. Lavin Ataxia-telangiectasia: from a rare disorder to a paradigm for cell signalling and cancer Nature 9 2008 759 769
-
(2008)
Nature
, vol.9
, pp. 759-769
-
-
Lavin, M.F.1
-
23
-
-
0030925222
-
Wip1, a novel human protein phosphatase that is induced in response to ionizing radiation in a p53-dependent manner
-
DOI 10.1073/pnas.94.12.6048
-
M. Fiscella Wip1, a novel human protein phosphatase that is induced in response to ionizing radiation in a p53-dependent manner Proc. Natl. Acad. Sci. U. S. A. 94 1997 6048 6053 (Pubitemid 27270633)
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, Issue.12
, pp. 6048-6053
-
-
Fiscella, M.1
Zhang, H.2
Fan, S.3
Sakaguchi, K.4
Shen, S.5
Mercer, W.E.6
Vande Woude, G.F.7
O'Connor, P.M.8
Appella, E.9
-
24
-
-
0037472924
-
DNA damage activates ATM through intermolecular autophosphorylation and dimer dissociation
-
DOI 10.1038/nature01368
-
J.Ch. Bakkenist, and M.B. Kastan DNA damage activates ATM through intermolecular autophosphorylation and dimer dissociation Nature 421 2003 499 506 (Pubitemid 36168436)
-
(2003)
Nature
, vol.421
, Issue.6922
, pp. 499-506
-
-
Bakkenist, C.J.1
Kastan, M.B.2
-
25
-
-
9244251125
-
Cell-cycle checkpoints and cancer
-
DOI 10.1038/nature03097
-
M.B. Kastan, and J. Bartek Cell-cycle checkpoints and cancer Nature 432 2004 316 323 (Pubitemid 39551659)
-
(2004)
Nature
, vol.432
, Issue.7015
, pp. 316-323
-
-
Kastan, M.B.1
Bartek, J.2
-
26
-
-
23844520213
-
ATM activation in normal human tissues and testicular cancer
-
J. Bartkova ATM activation in normal human tissues and testicular cancer Cell Cycle 4 2005 838 845 (Pubitemid 41353838)
-
(2005)
Cell Cycle
, vol.4
, Issue.6
, pp. 838-845
-
-
Bartkova, J.1
Bakkenist, C.J.2
Rajpert-De Meyts, E.3
Skakkebaek, N.E.4
Sehested, M.5
Lukas, J.6
Kastan, M.B.7
Bartek, J.8
-
27
-
-
2942687831
-
Phosphorylation of SMC1 is a critical downstream event in the ATM-NBS1-BRCA1 pathway
-
DOI 10.1101/gad.1200304
-
R. Kitagawa, J.Ch. Bakkenist, P.J. McKinnon, and M.B. Kastan Phosphorylation of SMC1 is a critical downstream event in the ATM-NBS1-BRCA1 pathway Genes Dev. 18 2004 1423 1438 (Pubitemid 38780629)
-
(2004)
Genes and Development
, vol.18
, Issue.12
, pp. 1423-1438
-
-
Kitagawa, R.1
Bakkenist, C.J.2
McKinnon, P.J.3
Kastan, M.B.4
-
28
-
-
15844394846
-
Conserved modes of recruitment of ATM, ATR and DNA-PKcs to sites of DNA damage
-
J. Falck, J. Coates, and S.P. Jackson Conserved modes of recruitment of ATM, ATR and DNA-PKcs to sites of DNA damage Nature 434 2005 605 6011
-
(2005)
Nature
, vol.434
, pp. 605-6011
-
-
Falck, J.1
Coates, J.2
Jackson, S.P.3
-
29
-
-
33747614605
-
Involvement of novel autophosphorylation sites in ATM activation
-
DOI 10.1038/sj.emboj.7601231, PII 7601231
-
S.V. Kozlov Involvement of novel autophosphorylation sites in ATM activation EMBO J. 25 2006 3504 3514 (Pubitemid 44264861)
-
(2006)
EMBO Journal
, vol.25
, Issue.15
, pp. 3504-3514
-
-
Kozlov, S.V.1
Graham, M.E.2
Peng, C.3
Chen, P.4
Robinson, P.J.5
Lavin, M.F.6
-
30
-
-
79953183356
-
Autophosphorylation and ATM Activation: Additional sites add to the complexity
-
S.V. Kozlov Autophosphorylation and ATM Activation: additional sites add to the complexity J. Biol. Chem. 286 2011 9107 9119
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 9107-9119
-
-
Kozlov, S.V.1
-
31
-
-
37549028411
-
DNA damage-induced acetylation of lysine 3016 of ATM activates ATM kinase activity
-
Y. Sun DNA damage-induced acetylation of lysine 3016 of ATM activates ATM kinase activity Mol. Cell. Biol. 27 2007 8502 8509
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 8502-8509
-
-
Sun, Y.1
-
32
-
-
34447551681
-
Roles of ATM and NBS1 in chromatin structure modulation and DNA double-strand break repair
-
DOI 10.1038/ncb1599, PII NCB1599
-
E. Berkovich, R.J. Monnat Jr., and M.B. Kastan Roles of ATM and NBS1 in chromatin structure modulation and DNA double-strand break repair Nat. Cell Biol. 9 2007 683 690 (Pubitemid 47214731)
-
(2007)
Nature Cell Biology
, vol.9
, Issue.6
, pp. 683-690
-
-
Berkovich, E.1
Monnat Jr., R.J.2
Kastan, M.B.3
-
33
-
-
1042301303
-
Requirement of protein phosphatase 5 in DNA-damage-induced ATM activation
-
DOI 10.1101/gad.1176004
-
A. Ali Requirement of protein phosphatase 5 in DNA-damage-induced ATM activation Genes Dev. 18 2004 249 254 (Pubitemid 38199250)
-
(2004)
Genes and Development
, vol.18
, Issue.3
, pp. 249-254
-
-
Ali, A.1
Zhang, J.2
Bao, S.3
Liu, I.4
Otterness, D.5
Dean, N.M.6
Abraham, R.T.7
Wang, X.-F.8
-
34
-
-
10044225999
-
Autophosphorylation of ataxia-telangiectasia mutated is regulated by protein phosphatase 2A
-
DOI 10.1038/sj.emboj.7600455
-
A.A. Goodarzi Autophosphorylation of ataxia-telangiectasia mutated is regulated by protein phosphatase 2A EMBO J. 23 2004 4451 4461 (Pubitemid 39601970)
-
(2004)
EMBO Journal
, vol.23
, Issue.22
, pp. 4451-4461
-
-
Goodarzi, A.A.1
Jonnalagadda, J.C.2
Douglas, P.3
Young, D.4
Ye, R.5
Moorhead, G.B.G.6
Lees-Miller, S.P.7
Khanna, K.K.8
-
36
-
-
0024731820
-
The quasi-steady-state assumption: A case study in perturbation
-
L.A. Segel, and M. Slemrod The quasi-steady-state assumption: a case study in perturbation SIAM Rev. 31 3 1989 446 477
-
(1989)
SIAM Rev.
, vol.31
, Issue.3
, pp. 446-477
-
-
Segel, L.A.1
Slemrod, M.2
-
37
-
-
0030905284
-
Mdm2 promotes the rapid degradation of p53
-
DOI 10.1038/387296a0
-
Y. Haupt, R. Maya, A. Kazaz, and M. Oren Mdm2 promotes the rapid degradation of p53 Nature 387 1997 296 299 (Pubitemid 27220766)
-
(1997)
Nature
, vol.387
, Issue.6630
, pp. 296-299
-
-
Haupt, Y.1
Maya, R.2
Kazaz, A.3
Oren, M.4
-
38
-
-
74249089749
-
Stress-mediated nuclear stabilization of p53 is regulated by ubiquitination and importin-α3 binding
-
N.D. Marchenko Stress-mediated nuclear stabilization of p53 is regulated by ubiquitination and importin-α3 binding Cell Death Differ. 17 2010 255 267
-
(2010)
Cell Death Differ.
, vol.17
, pp. 255-267
-
-
Marchenko, N.D.1
-
39
-
-
4143154293
-
Cooperative binding of tetrameric p53 to DNA
-
DOI 10.1016/j.jmb.2004.06.071, PII S0022283604007764
-
R.L. Weinberg, D.B. Veprintsev, and A.R. Fersht Cooperative binding of tetrameric p53 to DNA J. Mol. Biol. 341 2004 1145 1159 (Pubitemid 39092307)
-
(2004)
Journal of Molecular Biology
, vol.341
, Issue.5
, pp. 1145-1159
-
-
Weinberg, R.L.1
Veprintsev, D.B.2
Fersht, A.R.3
-
41
-
-
84890117110
-
P53-Mdm2 loop controlled by a balance of its feedback strength and effective dampening using ATM and delayed feedback
-
J. Wagner p53-Mdm2 loop controlled by a balance of its feedback strength and effective dampening using ATM and delayed feedback Proc. Natl. Acad. Sci. U. S. A. 102 2005 109 118
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 109-118
-
-
Wagner, J.1
-
42
-
-
25444513462
-
Steady states and oscillations in the p53/Mdm2 network
-
A. Ciliberto, B. Novak, and J.J. Tyson Steady states and oscillations in the p53/Mdm2 network Cell Cycle 4 2005 488 493 (Pubitemid 41359739)
-
(2005)
Cell Cycle
, vol.4
, Issue.3
, pp. 488-493
-
-
Ciliberto, A.1
Novak, B.2
Tyson, J.J.3
-
43
-
-
33846594408
-
Exploring mechanisms of the DNA-damage response: P53 pulses and their possible relevance to apoptosis
-
T. Zhang, P. Brazhnik, and J.J. Tyson Exploring mechanisms of the DNA-damage response: p53 pulses and their possible relevance to apoptosis Cell Cycle 6 2007 85 94 (Pubitemid 46178023)
-
(2007)
Cell Cycle
, vol.6
, Issue.1
, pp. 85-94
-
-
Zhang, T.1
Brazhnik, P.2
Tyson, J.J.3
-
45
-
-
84878648282
-
Mechanisms that enhance sustainability of p53 pulses
-
10.1371/journal.pone.0065242
-
J.K. Kim, and T.L. Jackson Mechanisms that enhance sustainability of p53 pulses PLoS 8 6 2013 e65242 10.1371/journal.pone.0065242
-
(2013)
PLoS
, vol.8
, Issue.6
, pp. 65242
-
-
Kim, J.K.1
Jackson, T.L.2
-
46
-
-
50149107827
-
Oscillations and bistability in the stochastic model of p53 regulation
-
K. Puszyński, B. Hat, and T. Lipniacki Oscillations and bistability in the stochastic model of p53 regulation J. Theor. Biol. 254 2008 452 465
-
(2008)
J. Theor. Biol.
, vol.254
, pp. 452-465
-
-
Puszyński, K.1
Hat, B.2
Lipniacki, T.3
-
47
-
-
78650723177
-
Spatio-temporal modelling of the Hes1 and p53-Mdm2 intracellular signalling pathways
-
M. Sturrock, A.J. Terry, D.P. Xirodimas, A.M. Thompson, and M.A.J. Chaplain Spatio-temporal modelling of the Hes1 and p53-Mdm2 intracellular signalling pathways J. Theor. Biol. 273 2011 15 31
-
(2011)
J. Theor. Biol.
, vol.273
, pp. 15-31
-
-
Sturrock, M.1
Terry, A.J.2
Xirodimas, D.P.3
Thompson, A.M.4
Chaplain, M.A.J.5
-
48
-
-
84861756648
-
Influence of the nuclear membrane, active transport, and cell shape on the Hes1 and p53Mdm2 pathways: Insights from spatio-temporal modelling
-
M. Sturrock, A.J. Terry, D.P. Xirodimas, A.M. Thompson, and M.A.J. Chaplain Influence of the nuclear membrane, active transport, and cell shape on the Hes1 and p53Mdm2 pathways: insights from spatio-temporal modelling Bull. Math. Biol. 74 2012 1531 1579
-
(2012)
Bull. Math. Biol.
, vol.74
, pp. 1531-1579
-
-
Sturrock, M.1
Terry, A.J.2
Xirodimas, D.P.3
Thompson, A.M.4
Chaplain, M.A.J.5
-
49
-
-
84879188035
-
Spatial stochastic modelling of the Hes1 gene regulatory network: Intrinsic noise can explain heterogeneity in embryonic stem cell differentiation
-
(9 pages)
-
M. Sturrock, A. Hellander, A. Matzavoinos, and M.A.J. Chaplain Spatial stochastic modelling of the Hes1 gene regulatory network: intrinsic noise can explain heterogeneity in embryonic stem cell differentiation J. R. Soc. Interface. 10 2013 20120988 (9 pages)
-
(2013)
J. R. Soc. Interface.
, vol.10
, pp. 20120988
-
-
Sturrock, M.1
Hellander, A.2
Matzavoinos, A.3
Chaplain, M.A.J.4
-
53
-
-
0035448927
-
Ataxia telangiectasia mutated-dependent apoptosis after genotoxic stress in the developing nervous system is determined by cellular differentiation status
-
Y. Lee, M.J. Chong, and P.J. McKinnon Ataxia telangiectasia mutated-dependent apoptosis after genotoxic stress in the developing nervous system is determined by cellular differentiation status J. Neurosci. 21 2001 6687 6693 (Pubitemid 32781113)
-
(2001)
Journal of Neuroscience
, vol.21
, Issue.17
, pp. 6687-6693
-
-
Lee, Y.1
Chong, M.J.2
McKinnon, P.J.3
-
54
-
-
3142534591
-
Initiating cellular stress responses
-
DOI 10.1016/j.cell.2004.06.023, PII S0092867404006166
-
J.Ch. Bakkenist, and M.B. Kastan Initiating cellular stress responses Cell 118 2004 9 17 (Pubitemid 38902810)
-
(2004)
Cell
, vol.118
, Issue.1
, pp. 9-17
-
-
Bakkenist, C.J.1
Kastan, M.B.2
-
55
-
-
17644409069
-
ATM activation by DNA double-strand breaks through the Mre11-Rad50-Nbs1 complex
-
DOI 10.1126/science.1108297
-
J.H. Lee, and T.T. Paull ATM activation by DNA double-strand breaks through the Mre11-Rad50-Nbs1 complex Science 308 2005 551 554 (Pubitemid 40570585)
-
(2005)
Science
, vol.308
, Issue.5721
, pp. 551-554
-
-
Lee, J.-H.1
Paull, T.T.2
|