-
1
-
-
80053315762
-
Coordinating growth and maturation - insights from Drosophila
-
Tennessen JM, Thummel CS, (2011) Coordinating growth and maturation- insights from Drosophila. Curr Biol 21: R750-757.
-
(2011)
Curr Biol
, vol.21
-
-
Tennessen, J.M.1
Thummel, C.S.2
-
2
-
-
70449106028
-
Modifications of RNA polymerase II are pivotal in regulating gene expression states
-
Brookes E, Pombo A, (2009) Modifications of RNA polymerase II are pivotal in regulating gene expression states. EMBO Rep 10: 1213-1219.
-
(2009)
EMBO Rep
, vol.10
, pp. 1213-1219
-
-
Brookes, E.1
Pombo, A.2
-
3
-
-
33751090746
-
Phosphorylation and functions of the RNA polymerase II CTD
-
Phatnani HP, Greenleaf AL, (2006) Phosphorylation and functions of the RNA polymerase II CTD. Genes Dev 20: 2922-2936.
-
(2006)
Genes Dev
, vol.20
, pp. 2922-2936
-
-
Phatnani, H.P.1
Greenleaf, A.L.2
-
4
-
-
84867160564
-
The RNA polymerase II CTD coordinates transcription and RNA processing
-
Hsin JP, Manley JL, (2012) The RNA polymerase II CTD coordinates transcription and RNA processing. Genes Dev 26: 2119-2137.
-
(2012)
Genes Dev
, vol.26
, pp. 2119-2137
-
-
Hsin, J.P.1
Manley, J.L.2
-
5
-
-
84856273602
-
A universal RNA polymerase II CTD cycle is orchestrated by complex interplays between kinase, phosphatase, and isomerase enzymes along genes
-
Bataille AR, Jeronimo C, Jacques PE, Laramee L, Fortin ME, et al. (2012) A universal RNA polymerase II CTD cycle is orchestrated by complex interplays between kinase, phosphatase, and isomerase enzymes along genes. Mol Cell 45: 158-170.
-
(2012)
Mol Cell
, vol.45
, pp. 158-170
-
-
Bataille, A.R.1
Jeronimo, C.2
Jacques, P.E.3
Laramee, L.4
Fortin, M.E.5
-
6
-
-
77957766550
-
Uniform transitions of the general RNA polymerase II transcription complex
-
Mayer A, Lidschreiber M, Siebert M, Leike K, Soding J, et al. (2010) Uniform transitions of the general RNA polymerase II transcription complex. Nat Struct Mol Biol 17: 1272-1278.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 1272-1278
-
-
Mayer, A.1
Lidschreiber, M.2
Siebert, M.3
Leike, K.4
Soding, J.5
-
7
-
-
0032548846
-
Growth-related changes in phosphorylation of yeast RNA polymerase II
-
Patturajan M, Schulte RJ, Sefton BM, Berezney R, Vincent M, et al. (1998) Growth-related changes in phosphorylation of yeast RNA polymerase II. J Biol Chem 273: 4689-4694.
-
(1998)
J Biol Chem
, vol.273
, pp. 4689-4694
-
-
Patturajan, M.1
Schulte, R.J.2
Sefton, B.M.3
Berezney, R.4
Vincent, M.5
-
8
-
-
0037721238
-
Budding yeast CTDK-I is required for DNA damage-induced transcription
-
Ostapenko D, Solomon MJ, (2003) Budding yeast CTDK-I is required for DNA damage-induced transcription. Eukaryot Cell 2: 274-283.
-
(2003)
Eukaryot Cell
, vol.2
, pp. 274-283
-
-
Ostapenko, D.1
Solomon, M.J.2
-
9
-
-
84855264172
-
The fission yeast stress-responsive MAPK pathway promotes meiosis via the phosphorylation of Pol II CTD in response to environmental and feedback cues
-
Sukegawa Y, Yamashita A, Yamamoto M, (2011) The fission yeast stress-responsive MAPK pathway promotes meiosis via the phosphorylation of Pol II CTD in response to environmental and feedback cues. PLoS Genet 7: e1002387.
-
(2011)
PLoS Genet
, vol.7
-
-
Sukegawa, Y.1
Yamashita, A.2
Yamamoto, M.3
-
10
-
-
0030790516
-
Transcriptionally repressed germ cells lack a subpopulation of phosphorylated RNA polymerase II in early embryos of Caenorhabditis elegans and Drosophila melanogaster
-
Seydoux G, Dunn MA, (1997) Transcriptionally repressed germ cells lack a subpopulation of phosphorylated RNA polymerase II in early embryos of Caenorhabditis elegans and Drosophila melanogaster. Development 124: 2191-2201.
-
(1997)
Development
, vol.124
, pp. 2191-2201
-
-
Seydoux, G.1
Dunn, M.A.2
-
11
-
-
12844250536
-
Small CTD phosphatases function in silencing neuronal gene expression
-
Yeo M, Lee SK, Lee B, Ruiz EC, Pfaff SL, et al. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science 307: 596-600.
-
(2005)
Science
, vol.307
, pp. 596-600
-
-
Yeo, M.1
Lee, S.K.2
Lee, B.3
Ruiz, E.C.4
Pfaff, S.L.5
-
12
-
-
80054756087
-
The Cyclin K/Cdk12 complex maintains genomic stability via regulation of expression of DNA damage response genes
-
Blazek D, Kohoutek J, Bartholomeeusen K, Johansen E, Hulinkova P, et al. (2011) The Cyclin K/Cdk12 complex maintains genomic stability via regulation of expression of DNA damage response genes. Genes Dev 25: 2158-2172.
-
(2011)
Genes Dev
, vol.25
, pp. 2158-2172
-
-
Blazek, D.1
Kohoutek, J.2
Bartholomeeusen, K.3
Johansen, E.4
Hulinkova, P.5
-
13
-
-
84862493306
-
Updating the RNA polymerase CTD code: adding gene-specific layers
-
Egloff S, Dienstbier M, Murphy S, (2012) Updating the RNA polymerase CTD code: adding gene-specific layers. Trends Genet 28: 333-341.
-
(2012)
Trends Genet
, vol.28
, pp. 333-341
-
-
Egloff, S.1
Dienstbier, M.2
Murphy, S.3
-
14
-
-
0037174844
-
Protein phosphatase-1 dephosphorylates the C-terminal domain of RNA polymerase-II
-
Washington K, Ammosova T, Beullens M, Jerebtsova M, Kumar A, et al. (2002) Protein phosphatase-1 dephosphorylates the C-terminal domain of RNA polymerase-II. J Biol Chem 277: 40442-40448.
-
(2002)
J Biol Chem
, vol.277
, pp. 40442-40448
-
-
Washington, K.1
Ammosova, T.2
Beullens, M.3
Jerebtsova, M.4
Kumar, A.5
-
15
-
-
0032754875
-
Regulated phosphorylation of the RNA polymerase II C-terminal domain (CTD)
-
Bensaude O, Bonnet F, Casse C, Dubois MF, Nguyen VT, et al. (1999) Regulated phosphorylation of the RNA polymerase II C-terminal domain (CTD). Biochem Cell Biol 77: 249-255.
-
(1999)
Biochem Cell Biol
, vol.77
, pp. 249-255
-
-
Bensaude, O.1
Bonnet, F.2
Casse, C.3
Dubois, M.F.4
Nguyen, V.T.5
-
16
-
-
2342533807
-
Ssu72 Is an RNA polymerase II CTD phosphatase
-
Krishnamurthy S, He X, Reyes-Reyes M, Moore C, Hampsey M, (2004) Ssu72 Is an RNA polymerase II CTD phosphatase. Mol Cell 14: 387-394.
-
(2004)
Mol Cell
, vol.14
, pp. 387-394
-
-
Krishnamurthy, S.1
He, X.2
Reyes-Reyes, M.3
Moore, C.4
Hampsey, M.5
-
17
-
-
0037223607
-
Trithorax interacts with type 1 serine/threonine protein phosphatase in Drosophila
-
Rudenko A, Bennett D, Alphey L, (2003) Trithorax interacts with type 1 serine/threonine protein phosphatase in Drosophila. EMBO Rep 4: 59-63.
-
(2003)
EMBO Rep
, vol.4
, pp. 59-63
-
-
Rudenko, A.1
Bennett, D.2
Alphey, L.3
-
18
-
-
4544337343
-
PP1beta9C interacts with Trithorax in Drosophila wing development
-
Rudenko A, Bennett D, Alphey L, (2004) PP1beta9C interacts with Trithorax in Drosophila wing development. Dev Dyn 231: 336-341.
-
(2004)
Dev Dyn
, vol.231
, pp. 336-341
-
-
Rudenko, A.1
Bennett, D.2
Alphey, L.3
-
19
-
-
34548556044
-
Essential, overlapping and redundant roles of the Drosophila protein phosphatase 1 alpha and 1 beta genes
-
Kirchner J, Gross S, Bennett D, Alphey L, (2007) Essential, overlapping and redundant roles of the Drosophila protein phosphatase 1 alpha and 1 beta genes. Genetics 176: 273-281.
-
(2007)
Genetics
, vol.176
, pp. 273-281
-
-
Kirchner, J.1
Gross, S.2
Bennett, D.3
Alphey, L.4
-
20
-
-
77955279255
-
The extended PP1 toolkit: designed to create specificity
-
Bollen M, Peti W, Ragusa MJ, Beullens M, (2010) The extended PP1 toolkit: designed to create specificity. Trends Biochem Sci 35: 450-458.
-
(2010)
Trends Biochem Sci
, vol.35
, pp. 450-458
-
-
Bollen, M.1
Peti, W.2
Ragusa, M.J.3
Beullens, M.4
-
21
-
-
0026671202
-
The isolation of novel inhibitory polypeptides of protein phosphatase 1 from bovine thymus nuclei
-
Beullens M, Van Eynde A, Stalmans W, Bollen M, (1992) The isolation of novel inhibitory polypeptides of protein phosphatase 1 from bovine thymus nuclei. J Biol Chem 267: 16538-16544.
-
(1992)
J Biol Chem
, vol.267
, pp. 16538-16544
-
-
Beullens, M.1
Van Eynde, A.2
Stalmans, W.3
Bollen, M.4
-
22
-
-
0032512720
-
Isolation and characterization of PNUTS, a putative protein phosphatase 1 nuclear targeting subunit
-
Allen PB, Kwon YG, Nairn AC, Greengard P, (1998) Isolation and characterization of PNUTS, a putative protein phosphatase 1 nuclear targeting subunit. J Biol Chem 273: 4089-4095.
-
(1998)
J Biol Chem
, vol.273
, pp. 4089-4095
-
-
Allen, P.B.1
Kwon, Y.G.2
Nairn, A.C.3
Greengard, P.4
-
23
-
-
0031583952
-
Purification and characterisation of p99, a nuclear modulator of protein phosphatase 1 activity
-
Kreivi JP, Trinkle-Mulcahy L, Lyon CE, Morrice NA, Cohen P, et al. (1997) Purification and characterisation of p99, a nuclear modulator of protein phosphatase 1 activity. FEBS Lett 420: 57-62.
-
(1997)
FEBS Lett
, vol.420
, pp. 57-62
-
-
Kreivi, J.P.1
Trinkle-Mulcahy, L.2
Lyon, C.E.3
Morrice, N.A.4
Cohen, P.5
-
24
-
-
25844468586
-
PNUTS enhances in vitro chromosome decondensation in a PP1-dependent manner
-
Landsverk HB, Kirkhus M, Bollen M, Kuntziger T, Collas P, (2005) PNUTS enhances in vitro chromosome decondensation in a PP1-dependent manner. Biochem J 390: 709-717.
-
(2005)
Biochem J
, vol.390
, pp. 709-717
-
-
Landsverk, H.B.1
Kirkhus, M.2
Bollen, M.3
Kuntziger, T.4
Collas, P.5
-
25
-
-
77955301844
-
Identification and characterization of a novel human PP1 phosphatase complex
-
Lee JH, You J, Dobrota E, Skalnik DG, (2010) Identification and characterization of a novel human PP1 phosphatase complex. J Biol Chem 285: 24466-24476.
-
(2010)
J Biol Chem
, vol.285
, pp. 24466-24476
-
-
Lee, J.H.1
You, J.2
Dobrota, E.3
Skalnik, D.G.4
-
26
-
-
77950425803
-
PNUTS knockdown potentiates the apoptotic effect of Roscovitine in breast and colon cancer cells
-
De Leon G, Cavino M, D'Angelo M, Krucher NA, (2010) PNUTS knockdown potentiates the apoptotic effect of Roscovitine in breast and colon cancer cells. Int J Oncol 36: 1269-1275.
-
(2010)
Int J Oncol
, vol.36
, pp. 1269-1275
-
-
De Leon, G.1
Cavino, M.2
D'Angelo, M.3
Krucher, N.A.4
-
27
-
-
46749089975
-
Reduced expression of PNUTS leads to activation of Rb-phosphatase and caspase-mediated apoptosis
-
De Leon G, Sherry TC, Krucher NA, (2008) Reduced expression of PNUTS leads to activation of Rb-phosphatase and caspase-mediated apoptosis. Cancer Biol Ther 7: 833-841.
-
(2008)
Cancer Biol Ther
, vol.7
, pp. 833-841
-
-
De Leon, G.1
Sherry, T.C.2
Krucher, N.A.3
-
28
-
-
46749090395
-
Downregulation of the phosphatase nuclear targeting subunit (PNUTS) triggers pRB dephosphorylation and apoptosis in pRB positive tumor cell lines
-
Grana X, (2008) Downregulation of the phosphatase nuclear targeting subunit (PNUTS) triggers pRB dephosphorylation and apoptosis in pRB positive tumor cell lines. Cancer Biol Ther 7: 842-844.
-
(2008)
Cancer Biol Ther
, vol.7
, pp. 842-844
-
-
Grana, X.1
-
29
-
-
33747339919
-
Dephosphorylation of Rb (Thr-821) in response to cell stress
-
Krucher NA, Rubin E, Tedesco VC, Roberts MH, Sherry TC, et al. (2006) Dephosphorylation of Rb (Thr-821) in response to cell stress. Exp Cell Res 312: 2757-2763.
-
(2006)
Exp Cell Res
, vol.312
, pp. 2757-2763
-
-
Krucher, N.A.1
Rubin, E.2
Tedesco, V.C.3
Roberts, M.H.4
Sherry, T.C.5
-
30
-
-
0036389746
-
PNUTS (phosphatase nuclear targeting subunit) inhibits retinoblastoma-directed PP1 activity
-
Udho E, Tedesco VC, Zygmunt A, Krucher NA, (2002) PNUTS (phosphatase nuclear targeting subunit) inhibits retinoblastoma-directed PP1 activity. Biochem Biophys Res Commun 297: 463-467.
-
(2002)
Biochem Biophys Res Commun
, vol.297
, pp. 463-467
-
-
Udho, E.1
Tedesco, V.C.2
Zygmunt, A.3
Krucher, N.A.4
-
31
-
-
34249050483
-
Protein phosphatase 1 nuclear targeting subunit is a hypoxia inducible gene: its role in post-translational modification of p53 and MDM2
-
Lee SJ, Lim CJ, Min JK, Lee JK, Kim YM, et al. (2007) Protein phosphatase 1 nuclear targeting subunit is a hypoxia inducible gene: its role in post-translational modification of p53 and MDM2. Cell Death Differ 14: 1106-1116.
-
(2007)
Cell Death Differ
, vol.14
, pp. 1106-1116
-
-
Lee, S.J.1
Lim, C.J.2
Min, J.K.3
Lee, J.K.4
Kim, Y.M.5
-
32
-
-
78049342712
-
The protein phosphatase 1 regulator PNUTS is a new component of the DNA damage response
-
Landsverk HB, Mora-Bermudez F, Landsverk OJ, Hasvold G, Naderi S, et al. (2010) The protein phosphatase 1 regulator PNUTS is a new component of the DNA damage response. EMBO Rep 11: 868-875.
-
(2010)
EMBO Rep
, vol.11
, pp. 868-875
-
-
Landsverk, H.B.1
Mora-Bermudez, F.2
Landsverk, O.J.3
Hasvold, G.4
Naderi, S.5
-
33
-
-
84874700585
-
MicroRNA-34a regulates cardiac ageing and function
-
Boon RA, Iekushi K, Lechner S, Seeger T, Fischer A, et al. (2013) MicroRNA-34a regulates cardiac ageing and function. Nature 495: 107-110.
-
(2013)
Nature
, vol.495
, pp. 107-110
-
-
Boon, R.A.1
Iekushi, K.2
Lechner, S.3
Seeger, T.4
Fischer, A.5
-
34
-
-
65949110134
-
Langerhans cell protein 1 (LCP1) binds to PNUTS in the nucleus: implications for this complex in transcriptional regulation
-
Lee SJ, Lee JK, Maeng YS, Kim YM, Kwon YG, (2009) Langerhans cell protein 1 (LCP1) binds to PNUTS in the nucleus: implications for this complex in transcriptional regulation. Exp Mol Med 41: 189-200.
-
(2009)
Exp Mol Med
, vol.41
, pp. 189-200
-
-
Lee, S.J.1
Lee, J.K.2
Maeng, Y.S.3
Kim, Y.M.4
Kwon, Y.G.5
-
35
-
-
79951959703
-
TOX4 and its binding partners recognize DNA adducts generated by platinum anticancer drugs
-
Bounaix Morand du Puch C, Barbier E, Kraut A, Coute Y, Fuchs J, et al. (2011) TOX4 and its binding partners recognize DNA adducts generated by platinum anticancer drugs. Arch Biochem Biophys 507: 296-303.
-
(2011)
Arch Biochem Biophys
, vol.507
, pp. 296-303
-
-
Bounaix Morand du Puch, C.1
Barbier, E.2
Kraut, A.3
Coute, Y.4
Fuchs, J.5
-
36
-
-
37849008702
-
Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes
-
Lee JH, Skalnik DG, (2008) Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes. Mol Cell Biol 28: 609-618.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 609-618
-
-
Lee, J.H.1
Skalnik, D.G.2
-
37
-
-
78651325219
-
Mass spectrometry and biochemical analysis of RNA polymerase II: targeting by protein phosphatase-1
-
Jerebtsova M, Klotchenko SA, Artamonova TO, Ammosova T, Washington K, et al. (2011) Mass spectrometry and biochemical analysis of RNA polymerase II: targeting by protein phosphatase-1. Mol Cell Biochem 347: 79-87.
-
(2011)
Mol Cell Biochem
, vol.347
, pp. 79-87
-
-
Jerebtsova, M.1
Klotchenko, S.A.2
Artamonova, T.O.3
Ammosova, T.4
Washington, K.5
-
38
-
-
0036010598
-
Regulator-driven functional diversification of protein phosphatase-1 in eukaryotic evolution
-
Ceulemans H, Stalmans W, Bollen M, (2002) Regulator-driven functional diversification of protein phosphatase-1 in eukaryotic evolution. Bioessays 24: 371-381.
-
(2002)
Bioessays
, vol.24
, pp. 371-381
-
-
Ceulemans, H.1
Stalmans, W.2
Bollen, M.3
-
39
-
-
0345192349
-
A genetic method for generating Drosophila eyes composed exclusively of mitotic clones of a single genotype
-
Stowers RS, Schwarz TL, (1999) A genetic method for generating Drosophila eyes composed exclusively of mitotic clones of a single genotype. Genetics 152: 1631-1639.
-
(1999)
Genetics
, vol.152
, pp. 1631-1639
-
-
Stowers, R.S.1
Schwarz, T.L.2
-
40
-
-
0031716573
-
Use of FLP/FRT system to study Drosophila development
-
Theodosiou NA, Xu T, (1998) Use of FLP/FRT system to study Drosophila development. Methods 14: 355-365.
-
(1998)
Methods
, vol.14
, pp. 355-365
-
-
Theodosiou, N.A.1
Xu, T.2
-
41
-
-
0037515628
-
PNUTS, a protein phosphatase 1 (PP1) nuclear targeting subunit. Characterization of its PP1- and RNA-binding domains and regulation by phosphorylation
-
Kim YM, Watanabe T, Allen PB, Kim YM, Lee SJ, et al. (2003) PNUTS, a protein phosphatase 1 (PP1) nuclear targeting subunit. Characterization of its PP1- and RNA-binding domains and regulation by phosphorylation. J Biol Chem 278: 13819-13828.
-
(2003)
J Biol Chem
, vol.278
, pp. 13819-13828
-
-
Kim, Y.M.1
Watanabe, T.2
Allen, P.B.3
Kim, Y.M.4
Lee, S.J.5
-
42
-
-
33750458355
-
Towards a comprehensive analysis of the protein phosphatase 1 interactome in Drosophila
-
Bennett D, Lyulcheva E, Alphey L, Hawcroft G, (2006) Towards a comprehensive analysis of the protein phosphatase 1 interactome in Drosophila. J Mol Biol 364: 196-212.
-
(2006)
J Mol Biol
, vol.364
, pp. 196-212
-
-
Bennett, D.1
Lyulcheva, E.2
Alphey, L.3
Hawcroft, G.4
-
43
-
-
0024990709
-
Protein phosphatase 1 activity in Drosophila mutants with abnormalities in mitosis and chromosome condensation
-
Dombradi V, Axton JM, Barker HM, Cohen PT, (1990) Protein phosphatase 1 activity in Drosophila mutants with abnormalities in mitosis and chromosome condensation. FEBS Lett 275: 39-43.
-
(1990)
FEBS Lett
, vol.275
, pp. 39-43
-
-
Dombradi, V.1
Axton, J.M.2
Barker, H.M.3
Cohen, P.T.4
-
44
-
-
0027272417
-
Mutations in the protein phosphatase 1 gene at 87B can differentially affect suppression of position-effect variegation and mitosis in Drosophila melanogaster
-
Baksa K, Morawietz H, Dombrádi V, Axton M, Taubert H, et al. (1993) Mutations in the protein phosphatase 1 gene at 87B can differentially affect suppression of position-effect variegation and mitosis in Drosophila melanogaster. Genetics 135: 117-125.
-
(1993)
Genetics
, vol.135
, pp. 117-125
-
-
Baksa, K.1
Morawietz, H.2
Dombrádi, V.3
Axton, M.4
Taubert, H.5
-
45
-
-
0040016432
-
The chaperone-like properties of mammalian inhibitor-2 are conserved in a Drosophila homologue
-
Bennett D, Szoor B, Alphey L, (1999) The chaperone-like properties of mammalian inhibitor-2 are conserved in a Drosophila homologue. Biochemistry 38: 16276-16282.
-
(1999)
Biochemistry
, vol.38
, pp. 16276-16282
-
-
Bennett, D.1
Szoor, B.2
Alphey, L.3
-
46
-
-
0035853032
-
Protein phosphatase 1 regulation by inhibitors and targeting subunits
-
Watanabe T, Huang HB, Horiuchi A, da Cruze Silva EF, Hsieh-Wilson L, et al. (2001) Protein phosphatase 1 regulation by inhibitors and targeting subunits. Proc Natl Acad Sci U S A 98: 3080-3085.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 3080-3085
-
-
Watanabe, T.1
Huang, H.B.2
Horiuchi, A.3
da Cruze Silva, E.F.4
Hsieh-Wilson, L.5
-
47
-
-
36749089980
-
Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells
-
Stock JK, Giadrossi S, Casanova M, Brookes E, Vidal M, et al. (2007) Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells. Nat Cell Biol 9: 1428-1435.
-
(2007)
Nat Cell Biol
, vol.9
, pp. 1428-1435
-
-
Stock, J.K.1
Giadrossi, S.2
Casanova, M.3
Brookes, E.4
Vidal, M.5
-
48
-
-
37249015899
-
Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7
-
Chapman RD, Heidemann M, Albert TK, Mailhammer R, Flatley A, et al. (2007) Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7. Science 318: 1780-1782.
-
(2007)
Science
, vol.318
, pp. 1780-1782
-
-
Chapman, R.D.1
Heidemann, M.2
Albert, T.K.3
Mailhammer, R.4
Flatley, A.5
-
49
-
-
84862206497
-
Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation
-
Hintermair C, Heidemann M, Koch F, Descostes N, Gut M, et al. (2012) Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation. Embo J 31: 2784-2797.
-
(2012)
Embo J
, vol.31
, pp. 2784-2797
-
-
Hintermair, C.1
Heidemann, M.2
Koch, F.3
Descostes, N.4
Gut, M.5
-
50
-
-
78649303325
-
Splicing-dependent RNA polymerase pausing in yeast
-
Alexander RD, Innocente SA, Barrass JD, Beggs JD, (2010) Splicing-dependent RNA polymerase pausing in yeast. Mol Cell 40: 582-593.
-
(2010)
Mol Cell
, vol.40
, pp. 582-593
-
-
Alexander, R.D.1
Innocente, S.A.2
Barrass, J.D.3
Beggs, J.D.4
-
51
-
-
30044441988
-
The human SWI/SNF subunit Brm is a regulator of alternative splicing
-
Batsche E, Yaniv M, Muchardt C, (2006) The human SWI/SNF subunit Brm is a regulator of alternative splicing. Nat Struct Mol Biol 13: 22-29.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 22-29
-
-
Batsche, E.1
Yaniv, M.2
Muchardt, C.3
-
52
-
-
79960442655
-
Structural insights to how mammalian capping enzyme reads the CTD code
-
Ghosh A, Shuman S, Lima CD, (2011) Structural insights to how mammalian capping enzyme reads the CTD code. Mol Cell 43: 299-310.
-
(2011)
Mol Cell
, vol.43
, pp. 299-310
-
-
Ghosh, A.1
Shuman, S.2
Lima, C.D.3
-
53
-
-
0033105827
-
Distinct roles for CTD Ser-2 and Ser-5 phosphorylation in the recruitment and allosteric activation of mammalian mRNA capping enzyme
-
Ho CK, Shuman S, (1999) Distinct roles for CTD Ser-2 and Ser-5 phosphorylation in the recruitment and allosteric activation of mammalian mRNA capping enzyme. Mol Cell 3: 405-411.
-
(1999)
Mol Cell
, vol.3
, pp. 405-411
-
-
Ho, C.K.1
Shuman, S.2
-
54
-
-
79960455840
-
Deciphering the RNA polymerase II CTD code in fission yeast
-
Schwer B, Shuman S, (2011) Deciphering the RNA polymerase II CTD code in fission yeast. Mol Cell 43: 311-318.
-
(2011)
Mol Cell
, vol.43
, pp. 311-318
-
-
Schwer, B.1
Shuman, S.2
-
55
-
-
79251486355
-
Cell competition
-
Baker NE, (2011) Cell competition. Curr Biol 21: R11-15.
-
(2011)
Curr Biol
, vol.21
-
-
Baker, N.E.1
-
56
-
-
84863309216
-
Fcp1-dependent dephosphorylation is required for M-phase-promoting factor inactivation at mitosis exit
-
Visconti R, Palazzo L, Della Monica R, Grieco D, (2012) Fcp1-dependent dephosphorylation is required for M-phase-promoting factor inactivation at mitosis exit. Nat Commun 3: 894.
-
(2012)
Nat Commun
, vol.3
, pp. 894
-
-
Visconti, R.1
Palazzo, L.2
Della Monica, R.3
Grieco, D.4
-
57
-
-
0035893314
-
Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain
-
Cho EJ, Kobor MS, Kim M, Greenblatt J, Buratowski S, (2001) Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain. Genes Dev 15: 3319-3329.
-
(2001)
Genes Dev
, vol.15
, pp. 3319-3329
-
-
Cho, E.J.1
Kobor, M.S.2
Kim, M.3
Greenblatt, J.4
Buratowski, S.5
-
58
-
-
84866176227
-
Fcp1 Dephosphorylation of the RNA Polymerase II C-Terminal Domain Is Required for Efficient Transcription of Heat Shock Genes
-
Fuda NJ, Buckley MS, Wei W, Core LJ, Waters CT, et al. (2012) Fcp1 Dephosphorylation of the RNA Polymerase II C-Terminal Domain Is Required for Efficient Transcription of Heat Shock Genes. Mol Cell Biol 32: 3428-3437.
-
(2012)
Mol Cell Biol
, vol.32
, pp. 3428-3437
-
-
Fuda, N.J.1
Buckley, M.S.2
Wei, W.3
Core, L.J.4
Waters, C.T.5
-
59
-
-
0033165865
-
An unusual eukaryotic protein phosphatase required for transcription by RNA polymerase II and CTD dephosphorylation in S. cerevisiae
-
Kobor MS, Archambault J, Lester W, Holstege FC, Gileadi O, et al. (1999) An unusual eukaryotic protein phosphatase required for transcription by RNA polymerase II and CTD dephosphorylation in S. cerevisiae. Mol Cell 4: 55-62.
-
(1999)
Mol Cell
, vol.4
, pp. 55-62
-
-
Kobor, M.S.1
Archambault, J.2
Lester, W.3
Holstege, F.C.4
Gileadi, O.5
-
60
-
-
0038168110
-
A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5
-
Yeo M, Lin PS, Dahmus ME, Gill GN, (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem 278: 26078-26085.
-
(2003)
J Biol Chem
, vol.278
, pp. 26078-26085
-
-
Yeo, M.1
Lin, P.S.2
Dahmus, M.E.3
Gill, G.N.4
-
61
-
-
33846611494
-
Role for the Ssu72 C-terminal domain phosphatase in RNA polymerase II transcription elongation
-
Reyes-Reyes M, Hampsey M, (2007) Role for the Ssu72 C-terminal domain phosphatase in RNA polymerase II transcription elongation. Mol Cell Biol 27: 926-936.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 926-936
-
-
Reyes-Reyes, M.1
Hampsey, M.2
-
62
-
-
70149118362
-
Phosphorylation of the RNA polymerase II C-terminal domain by TFIIH kinase is not essential for transcription of Saccharomyces cerevisiae genome
-
Hong SW, Hong SM, Yoo JW, Lee YC, Kim S, et al. (2009) Phosphorylation of the RNA polymerase II C-terminal domain by TFIIH kinase is not essential for transcription of Saccharomyces cerevisiae genome. Proc Natl Acad Sci U S A 106: 14276-14280.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 14276-14280
-
-
Hong, S.W.1
Hong, S.M.2
Yoo, J.W.3
Lee, Y.C.4
Kim, S.5
-
63
-
-
34347241749
-
Chemical inhibition of the TFIIH-associated kinase Cdk7/Kin28 does not impair global mRNA synthesis
-
Kanin EI, Kipp RT, Kung C, Slattery M, Viale A, et al. (2007) Chemical inhibition of the TFIIH-associated kinase Cdk7/Kin28 does not impair global mRNA synthesis. Proc Natl Acad Sci U S A 104: 5812-5817.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 5812-5817
-
-
Kanin, E.I.1
Kipp, R.T.2
Kung, C.3
Slattery, M.4
Viale, A.5
-
64
-
-
84868145609
-
Punctuation and syntax of the RNA polymerase II CTD code in fission yeast
-
Schwer B, Sanchez AM, Shuman S, (2012) Punctuation and syntax of the RNA polymerase II CTD code in fission yeast. Proc Natl Acad Sci U S A 109: 18024-18029.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 18024-18029
-
-
Schwer, B.1
Sanchez, A.M.2
Shuman, S.3
-
65
-
-
3342912254
-
Cloning and expression of mars, a novel member of the guanylate kinase associated protein family in Drosophila
-
Bennett D, Alphey L, (2004) Cloning and expression of mars, a novel member of the guanylate kinase associated protein family in Drosophila. Gene Expr Patterns 4: 529-535.
-
(2004)
Gene Expr Patterns
, vol.4
, pp. 529-535
-
-
Bennett, D.1
Alphey, L.2
-
66
-
-
0033562350
-
Development and validation of real-time quantitative reverse transcriptase-polymerase chain reaction for monitoring gene expression in cardiac myocytes in vitro
-
Winer J, Jung CK, Shackel I, Williams PM, (1999) Development and validation of real-time quantitative reverse transcriptase-polymerase chain reaction for monitoring gene expression in cardiac myocytes in vitro. Anal Biochem 270: 41-49.
-
(1999)
Anal Biochem
, vol.270
, pp. 41-49
-
-
Winer, J.1
Jung, C.K.2
Shackel, I.3
Williams, P.M.4
-
67
-
-
0034708480
-
The genome sequence of Drosophila melanogaster
-
Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, et al. (2000) The genome sequence of Drosophila melanogaster. Science 287: 2185-2195.
-
(2000)
Science
, vol.287
, pp. 2185-2195
-
-
Adams, M.D.1
Celniker, S.E.2
Holt, R.A.3
Evans, C.A.4
Gocayne, J.D.5
-
68
-
-
0012340085
-
Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence
-
Celniker SE, Wheeler DA, Kronmiller B, Carlson JW, Halpern A, et al. (2002) Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence. Genome Biol 3: RESEARCH0079.
-
(2002)
Genome Biol
, vol.3
-
-
Celniker, S.E.1
Wheeler, D.A.2
Kronmiller, B.3
Carlson, J.W.4
Halpern, A.5
-
69
-
-
65449136284
-
TopHat: discovering splice junctions with RNA-Seq
-
Trapnell C, Pachter L, Salzberg SL, (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
70
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25: 2078-2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
-
71
-
-
77952123055
-
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-
Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, et al. (2010) Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol 28: 511-515.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 511-515
-
-
Trapnell, C.1
Williams, B.A.2
Pertea, G.3
Mortazavi, A.4
Kwan, G.5
-
72
-
-
79953043801
-
The developmental transcriptome of Drosophila melanogaster
-
Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, et al. (2011) The developmental transcriptome of Drosophila melanogaster. Nature 471: 473-479.
-
(2011)
Nature
, vol.471
, pp. 473-479
-
-
Graveley, B.R.1
Brooks, A.N.2
Carlson, J.W.3
Duff, M.O.4
Landolin, J.M.5
-
73
-
-
13144281720
-
The C-terminal SET domains of ALL-1 and TRITHORAX interact with the INI1 and SNR1 proteins, components of the SWI/SNF complex
-
Rozenblatt-Rosen O, Rozovskaia T, Burakov D, Sedkov Y, Tillib S, et al. (1998) The C-terminal SET domains of ALL-1 and TRITHORAX interact with the INI1 and SNR1 proteins, components of the SWI/SNF complex. Proc Natl Acad Sci U S A 95: 4152-4157.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 4152-4157
-
-
Rozenblatt-Rosen, O.1
Rozovskaia, T.2
Burakov, D.3
Sedkov, Y.4
Tillib, S.5
-
74
-
-
33845399682
-
The Drosophila histone acetyltransferase Gcn5 and transcriptional adaptor Ada2a are involved in nucleosomal histone H4 acetylation
-
Ciurciu A, Komonyi O, Pankotai T, Boros IM, (2006) The Drosophila histone acetyltransferase Gcn5 and transcriptional adaptor Ada2a are involved in nucleosomal histone H4 acetylation. Mol Cell Biol 26: 9413-9423.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 9413-9423
-
-
Ciurciu, A.1
Komonyi, O.2
Pankotai, T.3
Boros, I.M.4
-
75
-
-
0024707288
-
Drosophila ninaA gene encodes an eye-specific cyclophilin (cyclosporine A binding protein)
-
Schneuwly S, Shortridge RD, Larrivee DC, Ono T, Ozaki M, et al. (1989) Drosophila ninaA gene encodes an eye-specific cyclophilin (cyclosporine A binding protein). Proc Natl Acad Sci U S A 86: 5390-5394.
-
(1989)
Proc Natl Acad Sci U S A
, vol.86
, pp. 5390-5394
-
-
Schneuwly, S.1
Shortridge, R.D.2
Larrivee, D.C.3
Ono, T.4
Ozaki, M.5
-
76
-
-
0024959573
-
The ninaA gene required for visual transduction in Drosophila encodes a homologue of cyclosporin A-binding protein
-
Shieh BH, Stamnes MA, Seavello S, Harris GL, Zuker CS, (1989) The ninaA gene required for visual transduction in Drosophila encodes a homologue of cyclosporin A-binding protein. Nature 338: 67-70.
-
(1989)
Nature
, vol.338
, pp. 67-70
-
-
Shieh, B.H.1
Stamnes, M.A.2
Seavello, S.3
Harris, G.L.4
Zuker, C.S.5
-
77
-
-
0023984847
-
Optimal alignments in linear space
-
Myers EW, Miller W, (1988) Optimal alignments in linear space. Comput Appl Biosci 4: 11-17.
-
(1988)
Comput Appl Biosci
, vol.4
, pp. 11-17
-
-
Myers, E.W.1
Miller, W.2
|