Deciphering the RNA Polymerase II CTD Code in Fission Yeast

Molecular Cell

Volumn 43, Issue 2, 2011, Pages 311-318

  Schwer, Beate ^a   Shuman, Stewart ^b  

^a WEILL CORNELL MEDICAL COLLEGE   (United States)

^b MEMORIAL SLOAN KETTERING CANCER CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; PROLINE; RNA POLYMERASE II; SERINE; TYROSINE;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ARTICLE; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; GENETIC TRANSCRIPTION; NONHUMAN; PROTEIN FUNCTION; PROTEIN PHOSPHORYLATION; SCHIZOSACCHAROMYCES POMBE; SEX DIFFERENTIATION; STRUCTURE ACTIVITY RELATION; VEGETATIVE GROWTH;

AMINO ACID SEQUENCE; BINDING SITES; MOLECULAR SEQUENCE DATA; PHOSPHORYLATION; PROTEIN STRUCTURE, TERTIARY; RNA POLYMERASE II; SCHIZOSACCHAROMYCES; SERINE;

SCHIZOSACCHAROMYCETACEAE;

EID: 79960455840     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2011.05.024     Document Type: Article

References (22)

1. Buratowski S. Progression through the RNA polymerase II CTD cycle. Mol. Cell 2009, 36:541-546.
2. Coudreuse D., van Bakel H., Dewez M., Soutourina J., Parnell T., Vandenhaute J., Cairns B., Werner M., Hermand D. A gene-specific requirement of RNA polymerase II CTD phosphorylation for sexual differentiation in S. pombe. Curr. Biol. 2010, 20:1053-1064.
3. Egloff S., Murphy S. Cracking the RNA polymerase II CTD code. Trends Genet. 2008, 24:280-288.
4. Fabrega C., Shen V., Shuman S., Lima C.D. Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II. Mol. Cell 2003, 11:1549-1561.
5. Hausmann S., Koiwa H., Krishnamurthy S., Hampsey M., Shuman S. Different strategies for carboxyl-terminal domain (CTD) recognition by serine 5-specific CTD phosphatases. J. Biol. Chem. 2005, 280:37681-37688.
6. Ho C.K., Shuman S. Distinct roles for CTD Ser-2 and Ser-5 phosphorylation in the recruitment and allosteric activation of mammalian mRNA capping enzyme. Mol. Cell 1999, 3:405-411.
7. Liu P., Kenney J.M., Stiller J.W., Greenleaf A.L. Genetic organization, length conservation, and evolution of RNA polymerase II carboxyl-terminal domain. Mol. Biol. Evol. 2010, 27:2628-2641.
8. Pei Y., Hausmann S., Ho C.K., Schwer B., Shuman S. The length, phosphorylation state, and primary structure of the RNA polymerase II carboxyl-terminal domain dictate interactions with mRNA capping enzymes. J. Biol. Chem. 2001, 276:28075-28082.
9. Pei Y., Schwer B., Hausmann S., Shuman S. Characterization of Schizosaccharomyces pombe RNA triphosphatase. Nucleic Acids Res. 2001, 29:387-396.
10. Pei Y., Schwer B., Saiz J., Fisher R.P., Shuman S. RNA triphosphatase is essential in Schizosaccharomyces pombe and Candida albicans. BMC Microbiol. 2001, 1:29.
11. Phatnani H.P., Greenleaf A.L. Phosphorylation and functions of the RNA polymerase II CTD. Genes Dev. 2006, 20:2922-2936.
12. Sakurai H., Ishihama A. Level of the RNA polymerase II in the fission yeast stays constant but phosphorylation of its carboxyl terminal domain varies depending on the phase and rate of cell growth. Genes Cells 2002, 7:273-284.
13. Sawaya R., Shuman S. Mutational analysis of the guanylyltransferase component of Mammalian mRNA capping enzyme. Biochemistry 2003, 42:8240-8249.
14. Schneider S., Pei Y., Shuman S., Schwer B. Separable functions of the fission yeast Spt5 carboxyl-terminal domain (CTD) in capping enzyme binding and transcription elongation overlap with those of the RNA polymerase II CTD. Mol. Cell. Biol. 2010, 30:2353-2364.
15. Shuman S., Liu Y., Schwer B. Covalent catalysis in nucleotidyl transfer reactions: essential motifs in Saccharomyces cerevisiae RNA capping enzyme are conserved in Schizosaccharomyces pombe and viral capping enzymes and among polynucleotide ligases. Proc. Natl. Acad. Sci. USA 1994, 91:12046-12050.
16. Stiller J.W., McConaughy B.L., Hall B.D. Evolutionary complementation for polymerase II CTD function. Yeast 2000, 16:57-64.
17. Verdecia M.A., Bowman M.E., Lu K.P., Hunter T., Noel J.P. Structural basis for phosphoserine-proline recognition by group IV WW domains. Nat. Struct. Biol. 2000, 7:639-643.
18. Werner-Allen J.W., Lee C.J., Liu P., Nicely N.I., Wang S., Greenleaf A.L., Zhou P. cis-Proline-mediated Ser(P)5 dephosphorylation by the RNA polymerase II C-terminal domain phosphatase Ssu72. J. Biol. Chem. 2011, 286:5717-5726.
19. West M.L., Corden J.L. Construction and analysis of yeast RNA polymerase II CTD deletion and substitution mutations. Genetics 1995, 140:1223-1233.
20. Xiang K., Nagaike T., Xiang S., Kilic T., Beh M.M., Manley J.L., Tong L. Crystal structure of the human symplekin-Ssu72-CTD phosphopeptide complex. Nature 2010, 467:729-733.
21. Yamamoto M. Regulation of meiosis in fission yeast. Cell Struct. Funct. 1996, 21:431-436.
22. Zhang Y., Kim Y., Genoud N., Gao J., Kelly J.W., Pfaff S.L., Gill G.N., Dixon J.E., Noel J.P. Determinants for dephosphorylation of the RNA polymerase II C-terminal domain by Scp1. Mol. Cell 2006, 24:759-770.