-
2
-
-
78049264771
-
The 26S proteasome: Assembly and function of a destructive machine
-
N. Gallastegui, and M. Groll The 26S proteasome: assembly and function of a destructive machine Trends Biochem Sci 35 2010 634 642
-
(2010)
Trends Biochem Sci
, vol.35
, pp. 634-642
-
-
Gallastegui, N.1
Groll, M.2
-
3
-
-
71749085013
-
Clp chaperone-proteases: Structure and function
-
W. Kress, Z. Maglica, and E. Weber-Ban Clp chaperone-proteases: structure and function Res Microbiol 160 2009 618 628
-
(2009)
Res Microbiol
, vol.160
, pp. 618-628
-
-
Kress, W.1
Maglica, Z.2
Weber-Ban, E.3
-
4
-
-
0032055408
-
A human homologue of Escherichia coli ClpP caseinolytic protease: Recombinant expression, intracellular processing and subcellular localization
-
T.J. Corydon, P. Bross, H.U. Holst, S. Neve, K. Kristiansen, and N. Gregersen A human homologue of Escherichia coli ClpP caseinolytic protease: recombinant expression, intracellular processing and subcellular localization Biochem J 331 1998 309 316
-
(1998)
Biochem J
, vol.331
, pp. 309-316
-
-
Corydon, T.J.1
Bross, P.2
Holst, H.U.3
Neve, S.4
Kristiansen, K.5
Gregersen, N.6
-
5
-
-
0023752052
-
The two-component, ATP-dependent Clp protease of Escherichia coli
-
Y. Katayama, S. Gottesman, J. Pumphrey, S. Rudikoff, W.P. Clark, and M.R. Maurizi The two-component, ATP-dependent Clp protease of Escherichia coli J Biol Chem 263 1988 15226 15236
-
(1988)
J Biol Chem
, vol.263
, pp. 15226-15236
-
-
Katayama, Y.1
Gottesman, S.2
Pumphrey, J.3
Rudikoff, S.4
Clark, W.P.5
Maurizi, M.R.6
-
6
-
-
84855195754
-
ClpXP, an ATP-powered unfolding and protein-degradation machine
-
T.A. Baker, and R.T. Sauer ClpXP, an ATP-powered unfolding and protein-degradation machine Biochim Biophys Acta 1823 2012 15 28
-
(2012)
Biochim Biophys Acta
, vol.1823
, pp. 15-28
-
-
Baker, T.A.1
Sauer, R.T.2
-
7
-
-
84864387458
-
ClpP: A structurally dynamic protease regulated by AAA + proteins
-
J.A. Alexopoulos, A. Guarnéa, and J. Ortega ClpP: a structurally dynamic protease regulated by AAA + proteins J Struct Biol 179 2012 202 210
-
(2012)
J Struct Biol
, vol.179
, pp. 202-210
-
-
Alexopoulos, J.A.1
Guarnéa, A.2
Ortega, J.3
-
9
-
-
31344467469
-
The asymmetry in the mature amino-terminus of ClpP facilitates a local symmetry match in ClpAP and ClpXP complexes
-
M.C. Bewley, V. Graziano, K. Griffin, and J.M. Flanagan The asymmetry in the mature amino-terminus of ClpP facilitates a local symmetry match in ClpAP and ClpXP complexes J Struct Biol 153 2006 113 128
-
(2006)
J Struct Biol
, vol.153
, pp. 113-128
-
-
Bewley, M.C.1
Graziano, V.2
Griffin, K.3
Flanagan, J.M.4
-
10
-
-
18144426344
-
The ClpP double ring tetradecameric protease exhibits plastic ring-ring interactions, and the N termini of its subunits form flexible loops that are essential for ClpXP and ClpAP complex formation
-
A. Gribun, M.S. Kimber, R. Ching, R. Sprangers, K.M. Fiebig, and W.A. Houry The ClpP double ring tetradecameric protease exhibits plastic ring-ring interactions, and the N termini of its subunits form flexible loops that are essential for ClpXP and ClpAP complex formation J Biol Chem 280 2005 16185 16196
-
(2005)
J Biol Chem
, vol.280
, pp. 16185-16196
-
-
Gribun, A.1
Kimber, M.S.2
Ching, R.3
Sprangers, R.4
Fiebig, K.M.5
Houry, W.A.6
-
12
-
-
33749247217
-
Crystal structure at 1.9 Å of E. Coli ClpP with a peptide covalently bound at the active site
-
A. Szyk, and M.R. Maurizi Crystal structure at 1.9 Å of E. coli ClpP with a peptide covalently bound at the active site J Struct Biol 156 2006 165 174
-
(2006)
J Struct Biol
, vol.156
, pp. 165-174
-
-
Szyk, A.1
Maurizi, M.R.2
-
13
-
-
0030691115
-
The structure of ClpP at 2.3 Å resolution suggests a model for ATP-dependent proteolysis
-
J. Wang, J.A. Hartling, and J.M. Flanagan The structure of ClpP at 2.3 Å resolution suggests a model for ATP-dependent proteolysis Cell 91 1997 447 456
-
(1997)
Cell
, vol.91
, pp. 447-456
-
-
Wang, J.1
Hartling, J.A.2
Flanagan, J.M.3
-
14
-
-
77956947687
-
Acyldepsipeptide antibiotics induce the formation of a structured axial channel in CIpP: A model for the CIpX/CIpA-bound state of CIpP
-
D.H.S. Li, Y.S. Chung, M. Gloyd, E. Joseph, R. Ghirlando, and G.D. Wright Acyldepsipeptide antibiotics induce the formation of a structured axial channel in CIpP: a model for the CIpX/CIpA-bound state of CIpP Chem Biol 17 2010 959 969
-
(2010)
Chem Biol
, vol.17
, pp. 959-969
-
-
Li, D.H.S.1
Chung, Y.S.2
Gloyd, M.3
Joseph, E.4
Ghirlando, R.5
Wright, G.D.6
-
15
-
-
77950519954
-
Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism
-
B.-G. Lee, E.Y. Park, K.-E. Lee, H. Jeon, K.H. Sung, and H. Paulsen Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism Nat Struct Mol Biol 17 2010 471 478
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 471-478
-
-
Lee, B.-G.1
Park, E.Y.2
Lee, K.-E.3
Jeon, H.4
Sung, K.H.5
Paulsen, H.6
-
16
-
-
0032469437
-
Crystal structure determination of Escherichia coli ClpP starting from an EM-derived mask
-
J. Wang, J.A. Hartling, and J.M. Flanagan Crystal structure determination of Escherichia coli ClpP starting from an EM-derived mask J Struct Biol 124 1998 151 163
-
(1998)
J Struct Biol
, vol.124
, pp. 151-163
-
-
Wang, J.1
Hartling, J.A.2
Flanagan, J.M.3
-
17
-
-
0028365133
-
Processive degradation of proteins by the ATP-dependent Clp protease from Escherichia coli
-
M.W. Thompson, S.K. Singh, and M.R. Maurizi Processive degradation of proteins by the ATP-dependent Clp protease from Escherichia coli J Biol Chem 269 1994 18209 18215
-
(1994)
J Biol Chem
, vol.269
, pp. 18209-18215
-
-
Thompson, M.W.1
Singh, S.K.2
Maurizi, M.R.3
-
18
-
-
55249118150
-
ClpP hydrolyzes a protein substrate processively in the absence of the ClpA ATPase: Mechanistic studies of ATP-independent proteolysis
-
L.D. Jennings, D.S. Lun, M. Medard, and S. Licht ClpP hydrolyzes a protein substrate processively in the absence of the ClpA ATPase: mechanistic studies of ATP-independent proteolysis Biochemistry 47 2008 11536 11546
-
(2008)
Biochemistry
, vol.47
, pp. 11536-11546
-
-
Jennings, L.D.1
Lun, D.S.2
Medard, M.3
Licht, S.4
-
19
-
-
27144502022
-
Control of peptide product sizes by the energy-dependent protease ClpAP
-
K.-H. Choi, and S. Licht Control of peptide product sizes by the energy-dependent protease ClpAP Biochemistry 44 2005 13921 13931
-
(2005)
Biochemistry
, vol.44
, pp. 13921-13931
-
-
Choi, K.-H.1
Licht, S.2
-
20
-
-
70349445398
-
Studying chaperone-proteases using a real-time approach based on FRET
-
K. Kolygo, N. Ranjan, W. Kress, F. Striebel, K. Hollenstein, and K. Neelsen Studying chaperone-proteases using a real-time approach based on FRET J Struct Biol 168 2009 267 277
-
(2009)
J Struct Biol
, vol.168
, pp. 267-277
-
-
Kolygo, K.1
Ranjan, N.2
Kress, W.3
Striebel, F.4
Hollenstein, K.5
Neelsen, K.6
-
21
-
-
44149116183
-
The structural basis for the activation and peptide recognition of bacterial ClpP
-
D.Y. Kim, and K.K. Kim The structural basis for the activation and peptide recognition of bacterial ClpP J Mol Biol 379 2008 760 771
-
(2008)
J Mol Biol
, vol.379
, pp. 760-771
-
-
Kim, D.Y.1
Kim, K.K.2
-
22
-
-
77952592280
-
Local and global mobility in the ClpA AAA plus chaperone detected by cryo-electron microscopy: Functional connotations
-
G. Effantin, T. Ishikawa, G.M. De Donatis, M.R. Maurizi, and A.C. Steven Local and global mobility in the ClpA AAA plus chaperone detected by cryo-electron microscopy: functional connotations Structure 18 2010 553 562
-
(2010)
Structure
, vol.18
, pp. 553-562
-
-
Effantin, G.1
Ishikawa, T.2
De Donatis, G.M.3
Maurizi, M.R.4
Steven, A.C.5
-
23
-
-
0028305742
-
Activity and specificity of Escherichia coli ClpAP protease in cleaving model peptide substrates
-
M.W. Thompson, and M.R. Maurizi Activity and specificity of Escherichia coli ClpAP protease in cleaving model peptide substrates J Biol Chem 269 1994 18201 18208
-
(1994)
J Biol Chem
, vol.269
, pp. 18201-18208
-
-
Thompson, M.W.1
Maurizi, M.R.2
-
24
-
-
0033638255
-
Dynamics of substrate denaturation and translocation by the ClpXP degradation machine
-
Y.-I. Kim, R.E. Burton, B.M. Burton, R.T. Sauer, and T.A. Baker Dynamics of substrate denaturation and translocation by the ClpXP degradation machine Mol Cell 5 2000 639 648
-
(2000)
Mol Cell
, vol.5
, pp. 639-648
-
-
Kim, Y.-I.1
Burton, R.E.2
Burton, B.M.3
Sauer, R.T.4
Baker, T.A.5
-
25
-
-
28044440088
-
Quantitative NMR spectroscopy of supramolecular complexes: Dynamic side pores in ClpP are important for product release
-
R. Sprangers, A. Gribun, P.M. Hwang, W.A. Houry, and L.E. Kay Quantitative NMR spectroscopy of supramolecular complexes: dynamic side pores in ClpP are important for product release Proc Natl Acad Sci 102 2005 16678 16683
-
(2005)
Proc Natl Acad Sci
, vol.102
, pp. 16678-16683
-
-
Sprangers, R.1
Gribun, A.2
Hwang, P.M.3
Houry, W.A.4
Kay, L.E.5
-
26
-
-
80054808221
-
Structural switching of Staphylococcus aureus Clp protease: A key to understanding protease dynamics
-
J. Zhang, F. Ye, L. Lan, H. Jiang, C. Luo, and C.-G. Yang Structural switching of Staphylococcus aureus Clp protease: a key to understanding protease dynamics J Biol Chem 286 2011 37590 37601
-
(2011)
J Biol Chem
, vol.286
, pp. 37590-37601
-
-
Zhang, J.1
Ye, F.2
Lan, L.3
Jiang, H.4
Luo, C.5
Yang, C.-G.6
-
28
-
-
71749110235
-
The antibiotic ADEP reprogrammes ClpP, switching it from a regulated to an uncontrolled protease
-
J. Kirstein, A. Hoffmann, H. Lilie, R. Schmidt, H. Rubsamen-Waigmann, and H. Brotz-Oesterhelt The antibiotic ADEP reprogrammes ClpP, switching it from a regulated to an uncontrolled protease EMBO Mol Med 1 2009 37 49
-
(2009)
EMBO Mol Med
, vol.1
, pp. 37-49
-
-
Kirstein, J.1
Hoffmann, A.2
Lilie, H.3
Schmidt, R.4
Rubsamen-Waigmann, H.5
Brotz-Oesterhelt, H.6
-
29
-
-
80054829705
-
Antibiotic acyldepsipeptides activate ClpP peptidase to degrade the cell division protein FtsZ
-
P. Sass, M. Josten, K. Famulla, G. Schiffer, H.-G. Sahl, and L. Hamoen Antibiotic acyldepsipeptides activate ClpP peptidase to degrade the cell division protein FtsZ Proc Natl Acad Sci 108 2011 17174 17479
-
(2011)
Proc Natl Acad Sci
, vol.108
, pp. 17174-17479
-
-
Sass, P.1
Josten, M.2
Famulla, K.3
Schiffer, G.4
Sahl, H.-G.5
Hamoen, L.6
-
30
-
-
84880754677
-
The ClpP peptidase of Wolbachia endobacteria is a novel target for drug development against filarial infections
-
A. Schiefer, J. Vollmer, C. Lämmer, S. Specht, C. Lentz, H. Ruebsamen-Schaeff, H. Brötz-Oesterhelt, A. Hoerauf, and K. Pfarr The ClpP peptidase of Wolbachia endobacteria is a novel target for drug development against filarial infections J Antimicrob Chemother 68 2013 1780 1800
-
(2013)
J Antimicrob Chemother
, vol.68
, pp. 1780-1800
-
-
Schiefer, A.1
Vollmer, J.2
Lämmer, C.3
Specht, S.4
Lentz, C.5
Ruebsamen-Schaeff, H.6
Brötz-Oesterhelt, H.7
Hoerauf, A.8
Pfarr, K.9
-
31
-
-
27144460621
-
Dysregulation of bacterial proteolytic machinery by a new class of antibiotics
-
H. Brotz-Oesterhelt, D. Beyer, H.-P. Kroll, R. Endermann, C. Ladel, and W. Schroeder Dysregulation of bacterial proteolytic machinery by a new class of antibiotics Nat Med 11 2005 1082 1087
-
(2005)
Nat Med
, vol.11
, pp. 1082-1087
-
-
Brotz-Oesterhelt, H.1
Beyer, D.2
Kroll, H.-P.3
Endermann, R.4
Ladel, C.5
Schroeder, W.6
-
32
-
-
58349103347
-
Turned on for degradation: ATPase-independent degradation by ClpP
-
M.C. Bewley, V. Graziano, K. Griffin, and J.M. Flanagan Turned on for degradation: ATPase-independent degradation by ClpP J Struct Biol 165 2009 118 125
-
(2009)
J Struct Biol
, vol.165
, pp. 118-125
-
-
Bewley, M.C.1
Graziano, V.2
Griffin, K.3
Flanagan, J.M.4
-
33
-
-
84856731634
-
Conformational dynamics of a membrane transport protein probed by H/D exchange and covalent labeling: The glycerol facilitator
-
Y. Pan, H. Piyadasa, J.D. O'Neil, and L. Konermann Conformational dynamics of a membrane transport protein probed by H/D exchange and covalent labeling: the glycerol facilitator J Mol Biol 416 2012 400 413
-
(2012)
J Mol Biol
, vol.416
, pp. 400-413
-
-
Pan, Y.1
Piyadasa, H.2
O'Neil, J.D.3
Konermann, L.4
-
34
-
-
0031912073
-
Determinants of protein hydrogen exchange studied in equine cytochrome c
-
J.S. Milne, L. Mayne, H. Roder, A.J. Wand, and S.W. Englander Determinants of protein hydrogen exchange studied in equine cytochrome c Protein Sci 7 1998 739 745
-
(1998)
Protein Sci
, vol.7
, pp. 739-745
-
-
Milne, J.S.1
Mayne, L.2
Roder, H.3
Wand, A.J.4
Englander, S.W.5
-
35
-
-
79958789586
-
Site-directed methyl group labeling as an NMR probe of structure and dynamics in supramolecular protein systems: Applications to the proteasome and to the CIpP protease
-
T.L. Religa, A.M. Ruschak, R. Rosenzweig, and L.E. Kay Site-directed methyl group labeling as an NMR probe of structure and dynamics in supramolecular protein systems: applications to the proteasome and to the CIpP protease J Am Chem Soc 133 2011 9063 9068
-
(2011)
J Am Chem Soc
, vol.133
, pp. 9063-9068
-
-
Religa, T.L.1
Ruschak, A.M.2
Rosenzweig, R.3
Kay, L.E.4
-
36
-
-
84863207545
-
Hydrogen exchange mass spectrometry: Are we out of the quicksand?
-
R.E. Iacob, and J.R. Engen Hydrogen exchange mass spectrometry: are we out of the quicksand? J Am Soc Mass Spectrom 23 2012 1003 1010
-
(2012)
J Am Soc Mass Spectrom
, vol.23
, pp. 1003-1010
-
-
Iacob, R.E.1
Engen, J.R.2
-
37
-
-
84858277365
-
Probing protein interactions with hydrogen/deuterium exchange and mass spectrometry - A review
-
A.J. Percy, M. Rey, K.M. Burns, and D.C. Schriemer Probing protein interactions with hydrogen/deuterium exchange and mass spectrometry - a review Anal Chim Acta 721 2012 7 21
-
(2012)
Anal Chim Acta
, vol.721
, pp. 7-21
-
-
Percy, A.J.1
Rey, M.2
Burns, K.M.3
Schriemer, D.C.4
-
38
-
-
33750320427
-
Hydrogen exchange and mass spectrometry: A historical perspective
-
S.W. Englander Hydrogen exchange and mass spectrometry: a historical perspective J Am Soc Mass Spectrom 17 2006 1481 1489
-
(2006)
J Am Soc Mass Spectrom
, vol.17
, pp. 1481-1489
-
-
Englander, S.W.1
-
39
-
-
79951887389
-
Hydrogen exchange mass spectrometry for studying protein structure and dynamics
-
L. Konermann, J. Pan, and Y. Liu Hydrogen exchange mass spectrometry for studying protein structure and dynamics Chem Soc Rev 40 2011 1224 1234
-
(2011)
Chem Soc Rev
, vol.40
, pp. 1224-1234
-
-
Konermann, L.1
Pan, J.2
Liu, Y.3
-
40
-
-
76749099328
-
Conformation and dynamics of biopharmaceuticals: Transition of mass spectrometry-based tools from academe to industry
-
I.A. Kaltashov, C.E. Bobst, R.R. Abzalimov, S.A. Berkowitz, and D. Houde Conformation and dynamics of biopharmaceuticals: transition of mass spectrometry-based tools from academe to industry J Am Soc Mass Spectrom 21 2010 323 337
-
(2010)
J Am Soc Mass Spectrom
, vol.21
, pp. 323-337
-
-
Kaltashov, I.A.1
Bobst, C.E.2
Abzalimov, R.R.3
Berkowitz, S.A.4
Houde, D.5
-
41
-
-
84862908883
-
Quantitative assessment of protein structural models by comparison of H/D exchange MS data with exchange behavior accurately predicted by DXCOREX
-
T. Liu, D. Pantazatos, S. Li, Y. Hamuro, V.J. Hilser, and V.L. Woods Quantitative assessment of protein structural models by comparison of H/D exchange MS data with exchange behavior accurately predicted by DXCOREX J Am Soc Mass Spectrom 23 2012 43 56
-
(2012)
J Am Soc Mass Spectrom
, vol.23
, pp. 43-56
-
-
Liu, T.1
Pantazatos, D.2
Li, S.3
Hamuro, Y.4
Hilser, V.J.5
Woods, V.L.6
-
42
-
-
84870553665
-
Exploring the conformational dynamics of the bovine ADP/ATP carrier in mitochondria
-
M. Rey, E. Forest, and L. Pelosi Exploring the conformational dynamics of the bovine ADP/ATP carrier in mitochondria Biochemistry 51 2012 9727 9735
-
(2012)
Biochemistry
, vol.51
, pp. 9727-9735
-
-
Rey, M.1
Forest, E.2
Pelosi, L.3
-
43
-
-
80053581731
-
Mapping unstructured regions and synergistic folding in intrinsically disordered proteins with amide H/D exchange mass spectrometry
-
T.R. Keppel, B.A. Howard, and D.D. Weis Mapping unstructured regions and synergistic folding in intrinsically disordered proteins with amide H/D exchange mass spectrometry Biochemistry 50 2011 8722 8732
-
(2011)
Biochemistry
, vol.50
, pp. 8722-8732
-
-
Keppel, T.R.1
Howard, B.A.2
Weis, D.D.3
-
44
-
-
84867501635
-
Hydrogen/deuterium exchange mass spectrometry reveals specific changes in the local flexibility of plasminogen activator inhibitor 1 upon binding to the somatomedin B domain of vitronectin
-
M.B. Trelle, D. Hirschberg, A. Jansson, M. Ploug, P. Roepstorff, and P.A. Andreasen Hydrogen/deuterium exchange mass spectrometry reveals specific changes in the local flexibility of plasminogen activator inhibitor 1 upon binding to the somatomedin B domain of vitronectin Biochemistry 51 2012 8256 8266
-
(2012)
Biochemistry
, vol.51
, pp. 8256-8266
-
-
Trelle, M.B.1
Hirschberg, D.2
Jansson, A.3
Ploug, M.4
Roepstorff, P.5
Andreasen, P.A.6
-
45
-
-
84862564042
-
Protein dynamics viewed by hydrogen exchange
-
J.J. Skinner, W.K. Lim, S. Bédard, B.E. Black, and S.W. Englander Protein dynamics viewed by hydrogen exchange Protein Sci 21 2012 996 1005
-
(2012)
Protein Sci
, vol.21
, pp. 996-1005
-
-
Skinner, J.J.1
Lim, W.K.2
Bédard, S.3
Black, B.E.4
Englander, S.W.5
-
46
-
-
0038293125
-
Quantification of protein-ligand interactions by mass spectrometry, titration, and H/D exchange: PLIMSTEX
-
M.M. Zhu, D.L. Rempel, Z. Du, and M.L. Gross Quantification of protein-ligand interactions by mass spectrometry, titration, and H/D exchange: PLIMSTEX J Am Chem Soc 125 2003 5252 5253
-
(2003)
J Am Chem Soc
, vol.125
, pp. 5252-5253
-
-
Zhu, M.M.1
Rempel, D.L.2
Du, Z.3
Gross, M.L.4
-
47
-
-
0037019523
-
A general mass spectrometry-based assay for the quantitation of protein-ligand binding interactions in solution
-
K.D. Powell, S. Ghaemmaghami, M.Z. Wang, L. Ma, T.G. Oas, and M.C. Fitzgerald A general mass spectrometry-based assay for the quantitation of protein-ligand binding interactions in solution J Am Chem Soc 124 2002 10256 10257
-
(2002)
J Am Chem Soc
, vol.124
, pp. 10256-10257
-
-
Powell, K.D.1
Ghaemmaghami, S.2
Wang, M.Z.3
Ma, L.4
Oas, T.G.5
Fitzgerald, M.C.6
-
48
-
-
0029643523
-
Protein folding intermediates: Native state hydrogen exchange
-
Y. Bai, T.R. Sosnick, L. Mayne, and S.W. Englander Protein folding intermediates: native state hydrogen exchange Science 269 1995 192 197
-
(1995)
Science
, vol.269
, pp. 192-197
-
-
Bai, Y.1
Sosnick, T.R.2
Mayne, L.3
Englander, S.W.4
-
49
-
-
0003932766
-
-
W. H. Freeman & Co New York, NY
-
T.E. Creighton Proteins 1993 W. H. Freeman & Co New York, NY
-
(1993)
Proteins
-
-
Creighton, T.E.1
-
50
-
-
69849083391
-
Hydrogen/deuterium exchange mass spectrometry with top-down electron capture dissociation for characterizing structural transitions of a 17 kDa protein
-
J. Pan, J. Han, C.H. Borchers, and L. Konermann Hydrogen/deuterium exchange mass spectrometry with top-down electron capture dissociation for characterizing structural transitions of a 17 kDa protein J Am Chem Soc 131 2009 12801 12808
-
(2009)
J Am Chem Soc
, vol.131
, pp. 12801-12808
-
-
Pan, J.1
Han, J.2
Borchers, C.H.3
Konermann, L.4
-
51
-
-
79955790484
-
Mapping the protein-protein interface between a toxin and its cognate antitoxin from the bacterial pathogen Streptococcus pyogenes
-
J.B. Sperry, C.L. Smith, M.G. Caparon, T. Ellenberger, and M.L. Gross Mapping the protein-protein interface between a toxin and its cognate antitoxin from the bacterial pathogen Streptococcus pyogenes Biochemistry 50 2011 4038 4045
-
(2011)
Biochemistry
, vol.50
, pp. 4038-4045
-
-
Sperry, J.B.1
Smith, C.L.2
Caparon, M.G.3
Ellenberger, T.4
Gross, M.L.5
-
52
-
-
77955453358
-
Discovery and characterization of the laulimalide-microtubule binding mode by mass shift perturbation mapping
-
M.J. Bennett, K. Barakat, J.T. Huzil, J. Tuszynski, and D.C. Schriemer Discovery and characterization of the laulimalide-microtubule binding mode by mass shift perturbation mapping Chem Biol 17 2010 725 734
-
(2010)
Chem Biol
, vol.17
, pp. 725-734
-
-
Bennett, M.J.1
Barakat, K.2
Huzil, J.T.3
Tuszynski, J.4
Schriemer, D.C.5
-
53
-
-
79951907062
-
Differential hydrogen/deuterium exchange mass spectrometry analysis of protein-ligand interactions
-
M.J. Chalmers, S.A. Busby, B.D. Pascal, G.M. West, and P.R. Griffin Differential hydrogen/deuterium exchange mass spectrometry analysis of protein-ligand interactions Expert Rev Proteomics 8 2011 43 59
-
(2011)
Expert Rev Proteomics
, vol.8
, pp. 43-59
-
-
Chalmers, M.J.1
Busby, S.A.2
Pascal, B.D.3
West, G.M.4
Griffin, P.R.5
-
54
-
-
0346220393
-
The role of dynamics in allosteric regulation
-
D. Kern, and E.R.P. Zuiderweg The role of dynamics in allosteric regulation Curr Opin Struct Biol 13 2003 748 757
-
(2003)
Curr Opin Struct Biol
, vol.13
, pp. 748-757
-
-
Kern, D.1
Zuiderweg, E.R.P.2
-
55
-
-
84861371612
-
Structural and energetic basis of allostery
-
D.C. Rees, [Annual Reviews, Palo Alto]
-
V.J. Hilser, J.O. Wrabl, and H.N. Motlagh Structural and energetic basis of allostery D.C. Rees, Annu Rev Biophys 41 2012 585 609 [Annual Reviews, Palo Alto]
-
(2012)
Annu Rev Biophys
, vol.41
, pp. 585-609
-
-
Hilser, V.J.1
Wrabl, J.O.2
Motlagh, H.N.3
-
56
-
-
80055000210
-
More than a bystander
-
P. Ball More than a bystander Nature 478 2011 467 468
-
(2011)
Nature
, vol.478
, pp. 467-468
-
-
Ball, P.1
-
57
-
-
52949091532
-
Hierarchical folding mechanism of apomyoglobin revealed by ultra-fast H/D exchange coupled with 2D NMR
-
T. Uzawa, C. Nishimura, S. Akiyama, K. Ishimori, S. Takahashi, and H.J. Dyson Hierarchical folding mechanism of apomyoglobin revealed by ultra-fast H/D exchange coupled with 2D NMR Proc Natl Acad Sci USA 105 2008 13859 13864
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 13859-13864
-
-
Uzawa, T.1
Nishimura, C.2
Akiyama, S.3
Ishimori, K.4
Takahashi, S.5
Dyson, H.J.6
-
58
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
J. Kyte, and R. Doolittle A simple method for displaying the hydropathic character of a protein J Mol Biol 157 1982 105 132
-
(1982)
J Mol Biol
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.2
-
59
-
-
77953694169
-
Control of substrate gating and translocation into ClpP by channel residues and ClpX binding
-
M.E. Lee, T.A. Baker, and R.T. Sauer Control of substrate gating and translocation into ClpP by channel residues and ClpX binding J Mol Biol 399 2010 707 718
-
(2010)
J Mol Biol
, vol.399
, pp. 707-718
-
-
Lee, M.E.1
Baker, T.A.2
Sauer, R.T.3
-
60
-
-
43149117084
-
Inhibition of protein aggregation: Supramolecular assemblies of arginine hold the key
-
U. Das, G. Hariprasad, A.S. Ethayathulla, P. Manral, T.K. Das, and S. Pasha Inhibition of protein aggregation: supramolecular assemblies of arginine hold the key PLoS One 2 2007 e1176
-
(2007)
PLoS One
, vol.2
, pp. 1176
-
-
Das, U.1
Hariprasad, G.2
Ethayathulla, A.S.3
Manral, P.4
Das, T.K.5
Pasha, S.6
-
61
-
-
23944523304
-
IL-1β epitope mapping using site-directed mutagenesis and hydrogen-deuterium exchange mass spectrometry analysis
-
J. Lu, D.R. Witcher, M.A. White, X. Wang, L. Huang, and R. Rathnachalam IL-1β epitope mapping using site-directed mutagenesis and hydrogen-deuterium exchange mass spectrometry analysis Biochemistry 44 2005 11106 11114
-
(2005)
Biochemistry
, vol.44
, pp. 11106-11114
-
-
Lu, J.1
Witcher, D.R.2
White, M.A.3
Wang, X.4
Huang, L.5
Rathnachalam, R.6
-
62
-
-
34250850205
-
Distinct static and dynamic interactions control ATPase-peptidase communication in a AAA plus protease
-
A. Martin, T.A. Baker, and R.T. Sauer Distinct static and dynamic interactions control ATPase-peptidase communication in a AAA plus protease Mol Cell 27 2007 41 52
-
(2007)
Mol Cell
, vol.27
, pp. 41-52
-
-
Martin, A.1
Baker, T.A.2
Sauer, R.T.3
-
63
-
-
80051581347
-
Hemoglobin allostery: Variations on the theme
-
A. Bellelli, and M. Brunori Hemoglobin allostery: variations on the theme Biochim Biophys Acta 1807 2011 1262 1272
-
(2011)
Biochim Biophys Acta
, vol.1807
, pp. 1262-1272
-
-
Bellelli, A.1
Brunori, M.2
-
64
-
-
78651189765
-
On the nature of allosteric transitions - A plausible model
-
J. Monod, J. Wyman, and J.P. Changeux On the nature of allosteric transitions - a plausible model J Mol Biol 12 1965 88 118
-
(1965)
J Mol Biol
, vol.12
, pp. 88-118
-
-
Monod, J.1
Wyman, J.2
Changeux, J.P.3
-
65
-
-
84876935158
-
Allosteric mechanisms can be distinguished using structural mass spectrometry
-
A. Dyachenko, R. Gruber, L. Shimon, A. Horovitz, and M. Sharon Allosteric mechanisms can be distinguished using structural mass spectrometry Proc Natl Acad Sci USA 110 2013 7235 7239
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 7235-7239
-
-
Dyachenko, A.1
Gruber, R.2
Shimon, L.3
Horovitz, A.4
Sharon, M.5
-
66
-
-
0028674499
-
Endopeptidase CLP: ATP-dependent Clp protease from Escherichia coli
-
M.R. Maurizi, M.W. Thompson, S.K. Singh, and S.H. Kim Endopeptidase CLP: ATP-dependent Clp protease from Escherichia coli Methods Enzymol 244 1994 314 331
-
(1994)
Methods Enzymol
, vol.244
, pp. 314-331
-
-
Maurizi, M.R.1
Thompson, M.W.2
Singh, S.K.3
Kim, S.H.4
-
67
-
-
80053133921
-
Activators of cylindrical proteases as antimicrobials: Identification and development of small molecule activators of ClpP protease
-
E. Leung, A. Datti, M. Cossette, J. Goodreid, S.E. McCaw, and M. Mah Activators of cylindrical proteases as antimicrobials: identification and development of small molecule activators of ClpP protease Chem Biol 18 2011 1167 1178
-
(2011)
Chem Biol
, vol.18
, pp. 1167-1178
-
-
Leung, E.1
Datti, A.2
Cossette, M.3
Goodreid, J.4
McCaw, S.E.5
Mah, M.6
-
68
-
-
51549121010
-
High-speed and high-resolution UPLC separation at zero degree Celsius
-
T.E. Wales, K.E. Fadgen, G.C. Gerhardt, and J.R. Engen High-speed and high-resolution UPLC separation at zero degree Celsius Anal Chem 80 2008 6815 6820
-
(2008)
Anal Chem
, vol.80
, pp. 6815-6820
-
-
Wales, T.E.1
Fadgen, K.E.2
Gerhardt, G.C.3
Engen, J.R.4
-
69
-
-
33751337111
-
Semi-automated data processing of hydrogen exchange mass spectra using HX-Express
-
D.D. Weis, J.R. Engen, and I.J. Kass Semi-automated data processing of hydrogen exchange mass spectra using HX-Express J Am Soc Mass Spectrom 17 2006 1700 1703
-
(2006)
J Am Soc Mass Spectrom
, vol.17
, pp. 1700-1703
-
-
Weis, D.D.1
Engen, J.R.2
Kass, I.J.3
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