-
1
-
-
31344467469
-
The asymmetry in the mature amino-terminus of ClpP facilitates a local symmetry match in ClpAP and ClpXP complexes
-
DOI 10.1016/j.jsb.2005.09.011, PII S1047847705001917
-
M.C. Bewley, V. Graziano, K. Griffin, and J.M. Flanagan The asymmetry in the mature amino-terminus of ClpP facilitates a local symmetry match in ClpAP and ClpXP complexes J. Struct. Biol. 153 2006 113 128 (Pubitemid 43139692)
-
(2006)
Journal of Structural Biology
, vol.153
, Issue.2
, pp. 113-128
-
-
Bewley, M.C.1
Graziano, V.2
Griffin, K.3
Flanagan, J.M.4
-
3
-
-
3242669872
-
Improved statistical methods for hit selection in high-throughput screening
-
C. Brideau, B. Gunter, B. Pikounis, and A. Liaw Improved statistical methods for hit selection in high-throughput screening J. Biomol. Screen. 8 2003 634 647
-
(2003)
J. Biomol. Screen.
, vol.8
, pp. 634-647
-
-
Brideau, C.1
Gunter, B.2
Pikounis, B.3
Liaw, A.4
-
4
-
-
27144460621
-
Dysregulation of bacterial proteolytic machinery by a new class of antibiotics
-
DOI 10.1038/nm1306, PII N1306
-
H. Brötz-Oesterhelt, D. Beyer, H.-P. Kroll, R. Endermann, C. Ladel, W. Schroeder, B. Hinzen, S. Raddatz, H. Paulsen, and K. Henninger Dysregulation of bacterial proteolytic machinery by a new class of antibiotics Nat. Med. 11 2005 1082 1087 (Pubitemid 41486830)
-
(2005)
Nature Medicine
, vol.11
, Issue.10
, pp. 1082-1087
-
-
Brotz-Oesterhelt, H.1
Beyer, D.2
Kroll, H.-P.3
Endermann, R.4
Ladel, C.5
Schroeder, W.6
Hinzen, B.7
Raddatz, S.8
Paulsen, H.9
Henninger, K.10
Bandow, J.E.11
Sahl, H.-G.12
Labischinski, H.13
-
5
-
-
0019881980
-
Secondary structure of bovine alpha s1- and beta-casein in solution
-
L.K. Creamer, T. Richardson, and D.A.D. Parry Secondary structure of bovine alpha s1- and beta-casein in solution Arch. Biochem. Biophys. 211 1981 689 696
-
(1981)
Arch. Biochem. Biophys.
, vol.211
, pp. 689-696
-
-
Creamer, L.K.1
Richardson, T.2
Parry, D.A.D.3
-
6
-
-
35748934247
-
Genetic manipulation of Neisseria gonorrhoeae
-
Unit 4A 2
-
J.P. Dillard Genetic manipulation of Neisseria gonorrhoeae Curr. Protoc. Microbiol. Chapter 4 2006 Unit 4A 2
-
(2006)
Curr. Protoc. Microbiol.
, vol.4
-
-
Dillard, J.P.1
-
7
-
-
0030726160
-
Regulatory subunits of energy-dependent proteases
-
S. Gottesman, M.R. Maurizi, and S. Wickner Regulatory subunits of energy-dependent proteases Cell 91 1997 435 438 (Pubitemid 27508231)
-
(1997)
Cell
, vol.91
, Issue.4
, pp. 435-438
-
-
Gottesman, S.1
Maurizi, M.R.2
Wickner, S.3
-
8
-
-
33746604766
-
Medicinal chemistry optimization of acyldepsipeptides of the enopeptin class antibiotics
-
DOI 10.1002/cmdc.200600055
-
B. Hinzen, S. Raddatz, H. Paulsen, T. Lampe, A. Schumacher, D. Häbich, V. Hellwig, J. Benet-Buchholz, R. Endermann, H. Labischinski, and H. Brötz-Oesterhelt Medicinal chemistry optimization of acyldepsipeptides of the enopeptin class antibiotics ChemMedChem 1 2006 689 693 (Pubitemid 44154354)
-
(2006)
ChemMedChem
, vol.1
, Issue.7
, pp. 689-693
-
-
Hinzen, B.1
Raddatz, S.2
Paulsen, H.3
Lampe, T.4
Schumacher, A.5
Habich, D.6
Hellwig, V.7
Benet-Buchholz, J.8
Endermann, R.9
Labischinski, H.10
Brotz-Oesterhelt, H.11
-
9
-
-
55249118150
-
ClpP hydrolyzes a protein substrate processively in the absence of the ClpA ATPase: Mechanistic studies of ATP-independent proteolysis
-
L.D. Jennings, D.S. Lun, M. Médard, and S. Licht ClpP hydrolyzes a protein substrate processively in the absence of the ClpA ATPase: mechanistic studies of ATP-independent proteolysis Biochemistry 47 2008 11536 11546
-
(2008)
Biochemistry
, vol.47
, pp. 11536-11546
-
-
Jennings, L.D.1
Lun, D.S.2
Médard, M.3
Licht, S.4
-
10
-
-
0023752052
-
The two-component, ATP-dependent Clp protease of Escherichia coli. Purification, cloning, and mutational analysis of the ATP-binding component
-
Y. Katayama, S. Gottesman, J. Pumphrey, S. Rudikoff, W.P. Clark, and M.R. Maurizi The two-component, ATP-dependent Clp protease of Escherichia coli. Purification, cloning, and mutational analysis of the ATP-binding component J. Biol. Chem. 263 1988 15226 15236
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 15226-15236
-
-
Katayama, Y.1
Gottesman, S.2
Pumphrey, J.3
Rudikoff, S.4
Clark, W.P.5
Maurizi, M.R.6
-
12
-
-
71749110235
-
The antibiotic ADEP reprogrammes ClpP, switching it from a regulated to an uncontrolled protease
-
J. Kirstein, A. Hoffmann, H. Lilie, R. Schmidt, H. Rübsamen- Waigmann, H. Brötz-Oesterhelt, A. Mogk, and A. Turgay The antibiotic ADEP reprogrammes ClpP, switching it from a regulated to an uncontrolled protease EMBO Mol. Med. 1 2009 37 49
-
(2009)
EMBO Mol. Med.
, vol.1
, pp. 37-49
-
-
Kirstein, J.1
Hoffmann, A.2
Lilie, H.3
Schmidt, R.4
Rübsamen-Waigmann, H.5
Brötz-Oesterhelt, H.6
Mogk, A.7
Turgay, A.8
-
13
-
-
0034774250
-
Polycations increase the permeability of Mycobacterium vaccae cell envelopes to hydrophobic compounds
-
M. Korycka-Machala, A. Ziółkowski, A. Rumijowska-Galewicz, K. Lisowska, and L. Sedlaczek Polycations increase the permeability of Mycobacterium vaccae cell envelopes to hydrophobic compounds Microbiology 147 2001 2769 2781 (Pubitemid 32976318)
-
(2001)
Microbiology
, vol.147
, Issue.10
, pp. 2769-2781
-
-
Korycka-Machala, M.1
Ziolskowski, A.2
Rumijowska-Galewicz, A.3
Lisowska, K.4
Sedlaczek, L.5
-
14
-
-
66449110287
-
DOCK 6: Combining techniques to model RNA-small molecule complexes
-
P.T. Lang, S.R. Brozell, S. Mukherjee, E.F. Pettersen, E.C. Meng, V. Thomas, R.C. Rizzo, D.A. Case, T.L. James, and I.D. Kuntz DOCK 6: combining techniques to model RNA-small molecule complexes RNA 15 2009 1219 1230
-
(2009)
RNA
, vol.15
, pp. 1219-1230
-
-
Lang, P.T.1
Brozell, S.R.2
Mukherjee, S.3
Pettersen, E.F.4
Meng, E.C.5
Thomas, V.6
Rizzo, R.C.7
Case, D.A.8
James, T.L.9
Kuntz, I.D.10
-
15
-
-
77950519954
-
Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism
-
B.G. Lee, E.Y. Park, K.E. Lee, H. Jeon, K.H. Sung, H. Paulsen, H. Rübsamen-Schaeff, H. Brötz-Oesterhelt, and H.K. Song Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism Nat. Struct. Mol. Biol. 17 2010 471 478
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 471-478
-
-
Lee, B.G.1
Park, E.Y.2
Lee, K.E.3
Jeon, H.4
Sung, K.H.5
Paulsen, H.6
Rübsamen-Schaeff, H.7
Brötz-Oesterhelt, H.8
Song, H.K.9
-
16
-
-
77956947687
-
Acyldepsipeptide antibiotics induce the formation of a structured axial channel in ClpP: A model for the ClpX/ClpA-bound state of ClpP
-
D.H. Li, Y.S. Chung, M. Gloyd, E. Joseph, R. Ghirlando, G.D. Wright, Y.Q. Cheng, M.R. Maurizi, A. Guarné, and J. Ortega Acyldepsipeptide antibiotics induce the formation of a structured axial channel in ClpP: A model for the ClpX/ClpA-bound state of ClpP Chem. Biol. 17 2010 959 969
-
(2010)
Chem. Biol.
, vol.17
, pp. 959-969
-
-
Li, D.H.1
Chung, Y.S.2
Gloyd, M.3
Joseph, E.4
Ghirlando, R.5
Wright, G.D.6
Cheng, Y.Q.7
Maurizi, M.R.8
Guarné, A.9
Ortega, J.10
-
17
-
-
0035289779
-
Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings
-
DOI 10.1016/S0169-409X(00)00129-0, PII S0169409X00001290
-
C.A. Lipinski, F. Lombardo, B.W. Dominy, and P.J. Feeney Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings Adv. Drug Deliv. Rev. 46 2001 3 26 (Pubitemid 33653411)
-
(2000)
Advanced Drug Delivery Reviews
, vol.46
, Issue.1-3
, pp. 3-26
-
-
Lipinski, C.A.1
Lombardo, F.2
Dominy, B.W.3
Feeney, P.J.4
-
18
-
-
0033980002
-
Neisseria meningitidis expressing transferrin binding proteins of Actinobacillus pleuropneumoniae can utilize porcine transferrin for growth
-
DOI 10.1128/IAI.68.2.550-557.2000
-
D.J. Litt, H.M. Palmer, and S.P. Borriello Neisseria meningitidis expressing transferrin binding proteins of Actinobacillus pleuropneumoniae can utilize porcine transferrin for growth Infect. Immun. 68 2000 550 557 (Pubitemid 30056506)
-
(2000)
Infection and Immunity
, vol.68
, Issue.2
, pp. 550-557
-
-
Litt, D.J.1
Palmer, H.M.2
Borriello, S.P.3
-
19
-
-
0035107305
-
Characterization of the N-terminal repeat domain of Escherichia coli ClpA - A class I Clp/HSP100 ATPase
-
DOI 10.1110/ps.41401
-
J.H. Lo, T.A. Baker, and R.T. Sauer Characterization of the N-terminal repeat domain of Escherichia coli ClpA-A class I Clp/HSP100 ATPase Protein Sci. 10 2001 551 559 (Pubitemid 32221143)
-
(2001)
Protein Science
, vol.10
, Issue.3
, pp. 551-559
-
-
Lo, J.H.1
Baker, T.A.2
Sauer, R.T.3
-
20
-
-
1242283848
-
Protein Binding and Disruption by Clp/Hsp100 Chaperones
-
DOI 10.1016/S0969-2126(04)00027-9
-
M.R. Maurizi, and D. Xia Protein binding and disruption by Clp/Hsp100 chaperones Structure 12 2004 175 183 (Pubitemid 38224541)
-
(2004)
Structure
, vol.12
, Issue.2
, pp. 175-183
-
-
Maurizi, M.R.1
Xia, D.2
-
22
-
-
0031614914
-
Independent ligand-induced folding of the RNA-binding domain and two functionally distinct antitermination regions in the phage λ N protein
-
J. Mogridge, P. Legault, J. Li, M.D. Van Oene, L.E. Kay, and J. Greenblatt Independent ligand-induced folding of the RNA-binding domain and two functionally distinct antitermination regions in the phage lambda N protein Mol. Cell 1 1998 265 275 (Pubitemid 128378667)
-
(1998)
Molecular Cell
, vol.1
, Issue.2
, pp. 265-275
-
-
Mogridge, J.1
Legault, P.2
Li, J.3
Van Oene, M.D.4
Kay, L.E.5
Greenblatt, J.6
-
23
-
-
0028139998
-
Antibacterial synergism of polymyxin B nonapeptide and hydrophobic antibiotics in experimental gram-negative infections in mice
-
I. Ofek, S. Cohen, R. Rahmani, K. Kabha, D. Tamarkin, Y. Herzig, and E. Rubinstein Antibacterial synergism of polymyxin B nonapeptide and hydrophobic antibiotics in experimental gram-negative infections in mice Antimicrob. Agents Chemother. 38 1994 374 377 (Pubitemid 24054268)
-
(1994)
Antimicrobial Agents and Chemotherapy
, vol.38
, Issue.2
, pp. 374-377
-
-
Ofek, I.1
Cohen, S.2
Rahmani, R.3
Kabha, K.4
Tamarkin, D.5
Herzig, Y.6
Rubinstein, E.7
-
24
-
-
0035896542
-
Regulation of the cystic fibrosis transmembrane conductance regulator Cl- channel by its R domain
-
L.S. Ostedgaard, O. Baldursson, and M.J. Welsh Regulation of the cystic fibrosis transmembrane conductance regulator Cl- channel by its R domain J. Biol. Chem. 276 2001 7689 7692
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 7689-7692
-
-
Ostedgaard, L.S.1
Baldursson, O.2
Welsh, M.J.3
-
25
-
-
69249241878
-
Utilization of synthetic peptides to evaluate the importance of substrate interaction at the proteolytic site of Escherichia coli Lon protease
-
J. Patterson-Ward, J. Tedesco, J. Hudak, J. Fishovitz, J. Becker, H. Frase, K. McNamara, and I. Lee Utilization of synthetic peptides to evaluate the importance of substrate interaction at the proteolytic site of Escherichia coli Lon protease Biochim. Biophys. Acta 1794 2009 1355 1363
-
(2009)
Biochim. Biophys. Acta
, vol.1794
, pp. 1355-1363
-
-
Patterson-Ward, J.1
Tedesco, J.2
Hudak, J.3
Fishovitz, J.4
Becker, J.5
Frase, H.6
McNamara, K.7
Lee, I.8
-
26
-
-
0037080244
-
Rapid grid-based construction of the molecular surface and the use of induced surface charge to calculate reaction field energies: Applications to the molecular systems and geometric objects
-
DOI 10.1002/jcc.1161
-
W. Rocchia, S. Sridharan, A. Nicholls, E. Alexov, A. Chiabrera, and B. Honig Rapid grid-based construction of the molecular surface and the use of induced surface charge to calculate reaction field energies: applications to the molecular systems and geometric objects J. Comput. Chem. 23 2002 128 137 (Pubitemid 34063137)
-
(2002)
Journal of Computational Chemistry
, vol.23
, Issue.1
, pp. 128-137
-
-
Rocchia, W.1
Sridharan, S.2
Nicholls, A.3
Alexov, E.4
Chiabrera, A.5
Honig, B.6
-
27
-
-
70349249705
-
Structural disorder in amyloid fibrils: Its implication in dynamic interactions of proteins
-
P. Tompa Structural disorder in amyloid fibrils: its implication in dynamic interactions of proteins FEBS J. 276 2009 5406 5415
-
(2009)
FEBS J.
, vol.276
, pp. 5406-5415
-
-
Tompa, P.1
-
28
-
-
0036840627
-
Modulation of the hydrophobic domain of polymyxin B nonapeptide: Effect on outer-membrane permeabilization and lipopolysaccharide neutralization
-
DOI 10.1124/mol.62.5.1036
-
H. Tsubery, I. Ofek, S. Cohen, M. Eisenstein, and M. Fridkin Modulation of the hydrophobic domain of polymyxin B nonapeptide: effect on outer-membrane permeabilization and lipopolysaccharide neutralization Mol. Pharmacol. 62 2002 1036 1042 (Pubitemid 35222493)
-
(2002)
Molecular Pharmacology
, vol.62
, Issue.5
, pp. 1036-1042
-
-
Tsubery, H.1
Ofek, I.2
Cohen, S.3
Eisenstein, M.4
Fridkin, M.5
-
29
-
-
0023023318
-
Susceptibility testing of slowly growing mycobacteria by a microdilution MIC method with 7H9 broth
-
R.J. Wallace Jr., D.R. Nash, L.C. Steele, and V. Steingrube Susceptibility testing of slowly growing mycobacteria by a microdilution MIC method with 7H9 broth J. Clin. Microbiol. 24 1986 976 981 (Pubitemid 17193352)
-
(1986)
Journal of Clinical Microbiology
, vol.24
, Issue.6
, pp. 976-981
-
-
Wallace Jr., R.J.1
Nash, D.R.2
Steele, L.C.3
Steingrube, V.4
-
30
-
-
1242289869
-
The N-terminal zinc binding domain of ClpX is a dimerization domain that modulates the chaperone function
-
U.A. Wojtyra, G. Thibault, A. Tuite, and W.A. Houry The N-terminal zinc binding domain of ClpX is a dimerization domain that modulates the chaperone function J. Biol. Chem. 278 2003 48981 48990
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 48981-48990
-
-
Wojtyra, U.A.1
Thibault, G.2
Tuite, A.3
Houry, W.A.4
-
31
-
-
0033003760
-
A simple statistical parameter for use in evaluation and validation of high throughput screening assays
-
DOI 10.1177/108705719900400206
-
J.-H. Zhang, T.D.Y. Chung, and K.R. Oldenburg A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays J. Biomol. Screen. 4 1999 67 73 (Pubitemid 29278954)
-
(1999)
Journal of Biomolecular Screening
, vol.4
, Issue.2
, pp. 67-73
-
-
Zhang, J.-H.1
Chung, T.D.Y.2
Oldenburg, K.R.3
-
32
-
-
20044382800
-
Navigating the chaperone network: An integrative map of physical and genetic interactions mediated by the hsp90 chaperone
-
DOI 10.1016/j.cell.2004.12.024
-
R. Zhao, M. Davey, Y.C. Hsu, P. Kaplanek, A. Tong, A.B. Parsons, N. Krogan, G. Cagney, D. Mai, and J. Greenblatt Navigating the chaperone network: an integrative map of physical and genetic interactions mediated by the hsp90 chaperone Cell 120 2005 715 727 (Pubitemid 40343082)
-
(2005)
Cell
, vol.120
, Issue.5
, pp. 715-727
-
-
Zhao, R.1
Davey, M.2
Hsu, Y.-C.3
Kaplanek, P.4
Tong, A.5
Parsons, A.B.6
Krogan, N.7
Cagney, G.8
Mai, D.9
Greenblatt, J.10
Boone, C.11
Emili, A.12
Houry, W.A.13
-
33
-
-
39049143941
-
Molecular chaperone Hsp90 stabilizes Pih1/Nop17 to maintain R2TP complex activity that regulates snoRNA accumulation
-
DOI 10.1083/jcb.200709061
-
R. Zhao, Y. Kakihara, A. Gribun, J. Huen, G. Yang, M. Khanna, M. Costanzo, R.L. Brost, C. Boone, and T.R. Hughes Molecular chaperone Hsp90 stabilizes Pih1/Nop17 to maintain R2TP complex activity that regulates snoRNA accumulation J. Cell Biol. 180 2008 563 578 (Pubitemid 351240704)
-
(2008)
Journal of Cell Biology
, vol.180
, Issue.3
, pp. 563-578
-
-
Zhao, R.1
Kakihara, Y.2
Gribun, A.3
Huen, J.4
Yang, G.5
Khanna, M.6
Costanzo, M.7
Brost, R.L.8
Boone, C.9
Hughes, T.R.10
Yip, C.M.11
Houry, W.A.12
|