-
1
-
-
0014500844
-
The mechanism of activation of trypsinogen. The role of the four N-terminal aspartyl residues
-
Abita JP, Delaage M, Lazdunski M,. 1969. The mechanism of activation of trypsinogen. The role of the four N-terminal aspartyl residues. Eur J Biochem 8: 314-324.
-
(1969)
Eur J Biochem
, vol.8
, pp. 314-324
-
-
Abita, J.P.1
Delaage, M.2
Lazdunski, M.3
-
2
-
-
54349095614
-
Recent advances in atherosclerosis-based proteomics: New biomarkers and a future perspective
-
Alvarez-Llamas G, de la Cuesta F, Barderas MEG, Darde V, Padial LR, Vivanco F,. 2008. Recent advances in atherosclerosis-based proteomics: New biomarkers and a future perspective. Expert Rev Proteomics 5: 679-691.
-
(2008)
Expert Rev Proteomics
, vol.5
, pp. 679-691
-
-
Alvarez-Llamas, G.1
De La Cuesta, F.2
Barderas, M.E.G.3
Darde, V.4
Padial, L.R.5
Vivanco, F.6
-
3
-
-
66949116701
-
A human proteome detection and quantitation project
-
Anderson NL, Anderson NG, Pearson TW, Borchers CH, Paulovich AG, Patterson SD, Gillette M, Aebersold R, Carr SA,. 2009. A human proteome detection and quantitation project. Mol Cell Proteomics 8: 883-886.
-
(2009)
Mol Cell Proteomics
, vol.8
, pp. 883-886
-
-
Anderson, N.L.1
Anderson, N.G.2
Pearson, T.W.3
Borchers, C.H.4
Paulovich, A.G.5
Patterson, S.D.6
Gillette, M.7
Aebersold, R.8
Carr, S.A.9
-
4
-
-
64049097456
-
High-yielding enzymatic method for isolation and culture of microvascular endothelial cells from bovine retinal blood vessels
-
Banumathi E, Haribalaganesh R, Babu SSP, Kumar NS, Sangiliyandi G,. 2009. High-yielding enzymatic method for isolation and culture of microvascular endothelial cells from bovine retinal blood vessels. Microvasc Res 77: 377-381.
-
(2009)
Microvasc Res
, vol.77
, pp. 377-381
-
-
Banumathi, E.1
Haribalaganesh, R.2
Babu, S.S.P.3
Kumar, N.S.4
Sangiliyandi, G.5
-
6
-
-
0014689979
-
Role of a buried acid group in the mechanism of action of chymotrypsin
-
Blow DM, Birktoft JJ, Hartley BS,. 1969. Role of a buried acid group in the mechanism of action of chymotrypsin. Nature 221: 337-340.
-
(1969)
Nature
, vol.221
, pp. 337-340
-
-
Blow, D.M.1
Birktoft, J.J.2
Hartley, B.S.3
-
7
-
-
0016796849
-
The refined crystal structure of bovine beta-trypsin at 1.8 a resolution. II. Crystallographic refinement, calcium binding site, benzamidine binding site and active site at PH 7.0
-
Bode W, Schwager P,. 1975. The refined crystal structure of bovine beta-trypsin at 1.8 a resolution. II. Crystallographic refinement, calcium binding site, benzamidine binding site and active site at PH 7.0. J Mol Biol 98: 693-717.
-
(1975)
J Mol Biol
, vol.98
, pp. 693-717
-
-
Bode, W.1
Schwager, P.2
-
8
-
-
0017138322
-
Crystal structure of bovine trypsinogen at 1-8 a resolution. I. Data collection, application of Patterson search techniques and preliminary structural interpretation
-
Bode W, Fehlhammer H, Huber R,. 1976. Crystal structure of bovine trypsinogen at 1-8 a resolution. I. Data collection, application of Patterson search techniques and preliminary structural interpretation. J Mol Biol 106: 325-335.
-
(1976)
J Mol Biol
, vol.106
, pp. 325-335
-
-
Bode, W.1
Fehlhammer, H.2
Huber, R.3
-
9
-
-
79957958069
-
Surfome analysis of a wild-type wine Saccharomyces cerevisiae strain
-
Braconi D, Amato L, Bernardini G, Arena S, Orlandini M, Scaloni A, Santucci A,. 2011. Surfome analysis of a wild-type wine Saccharomyces cerevisiae strain. Food Microbiol 28: 1220-1230.
-
(2011)
Food Microbiol
, vol.28
, pp. 1220-1230
-
-
Braconi, D.1
Amato, L.2
Bernardini, G.3
Arena, S.4
Orlandini, M.5
Scaloni, A.6
Santucci, A.7
-
10
-
-
84855877960
-
Systematic and quantitative comparison of digest efficiency and specificity reveals the impact of trypsin quality on MS-based proteomics
-
Burkhart JM, Schumbrutzki C, Wortelkamp S, Sickmann A, Zahedi RP,. 2012. Systematic and quantitative comparison of digest efficiency and specificity reveals the impact of trypsin quality on MS-based proteomics. J Proteomics 75: 1454-1462.
-
(2012)
J Proteomics
, vol.75
, pp. 1454-1462
-
-
Burkhart, J.M.1
Schumbrutzki, C.2
Wortelkamp, S.3
Sickmann, A.4
Zahedi, R.P.5
-
11
-
-
34547232157
-
Optimization of mass spectrometry-compatible surfactants for shotgun proteomics
-
Chen EI, Cociorva D, Norris JL, Yates JR III., 2007. Optimization of mass spectrometry-compatible surfactants for shotgun proteomics. J Proteome Res 6: 2529-2538.
-
(2007)
J Proteome Res
, vol.6
, pp. 2529-2538
-
-
Chen, E.I.1
Cociorva, D.2
Norris, J.L.3
Yates III, J.R.4
-
12
-
-
0025892696
-
Changes in insulin-receptor structure associated with trypsin-induced activation of the receptor tyrosine kinase
-
Clark S, Eckardt G, Siddle K, Harrison LC,. 1991. Changes in insulin-receptor structure associated with trypsin-induced activation of the receptor tyrosine kinase. Biochem J 276 (Pt 1): 27-33.
-
(1991)
Biochem J
, vol.276
, Issue.PART 1
, pp. 27-33
-
-
Clark, S.1
Eckardt, G.2
Siddle, K.3
Harrison, L.C.4
-
13
-
-
0034661893
-
Utility of accurate mass tags for proteome-wide protein identification
-
Conrads TP, Anderson GA, Veenstra TD, Pasa-Tolic̈ L, Smith RD,. 2000. Utility of accurate mass tags for proteome-wide protein identification. Anal Chem 72: 3349-3354.
-
(2000)
Anal Chem
, vol.72
, pp. 3349-3354
-
-
Conrads, T.P.1
Anderson, G.A.2
Veenstra, T.D.3
Pasa-Tolic̈, L.4
Smith, R.D.5
-
14
-
-
3142702204
-
Tandem: Matching proteins with tandem mass spectra
-
Craig R, Beavis RC,. 2004. Tandem: Matching proteins with tandem mass spectra. Bioinformatics 20: 1466-1467.
-
(2004)
Bioinformatics
, vol.20
, pp. 1466-1467
-
-
Craig, R.1
Beavis, R.C.2
-
15
-
-
0031744875
-
Proteinase-activated receptors: Novel mechanisms of signaling by serine proteases
-
Déry O, Corvera CU, Steinhoff M, Bunnett NW,. 1998. Proteinase-activated receptors: Novel mechanisms of signaling by serine proteases. Am J Physiol 274: C1429-C1452.
-
(1998)
Am J Physiol
, vol.274
-
-
Déry, O.1
Corvera, C.U.2
Steinhoff, M.3
Bunnett, N.W.4
-
16
-
-
0020807419
-
Preparation of stable isotope-incorporated peptide internal standards for field desorption mass spectrometry quantification of peptides in biologic tissue
-
Desiderio DM, Kai M,. 1983. Preparation of stable isotope-incorporated peptide internal standards for field desorption mass spectrometry quantification of peptides in biologic tissue. Biomed Mass Spectrom 10: 471-479.
-
(1983)
Biomed Mass Spectrom
, vol.10
, pp. 471-479
-
-
Desiderio, D.M.1
Kai, M.2
-
17
-
-
67650361071
-
Serine proteases
-
Di Cera E,. 2009. Serine proteases. IUBMB Life 61: 510-515.
-
(2009)
IUBMB Life
, vol.61
, pp. 510-515
-
-
Di Cera, E.1
-
18
-
-
79959701373
-
Surface shaving as a versatile tool to profile global interactions between human serum proteins and the staphylococcus aureus cell surface
-
Dreisbach A, van der Kooi-Pol MM, Otto A, Gronau K, Bonarius HPJ, Westra H, Groen H, Becher D, Hecker M, van Dijl JM,. 2011. Surface shaving as a versatile tool to profile global interactions between human serum proteins and the staphylococcus aureus cell surface. Proteomics 11: 2921-2930.
-
(2011)
Proteomics
, vol.11
, pp. 2921-2930
-
-
Dreisbach, A.1
Van Der Kooi-Pol, M.M.2
Otto, A.3
Gronau, K.4
Bonarius, H.P.J.5
Westra, H.6
Groen, H.7
Becher, D.8
Hecker, M.9
Van Dijl, J.M.10
-
19
-
-
84863352056
-
Comparison of sensitization between beta-lactoglobulin and its hydrolysates
-
Duan C, Huo G, Yang L, Ren D, Chen J,. 2012. Comparison of sensitization between beta-lactoglobulin and its hydrolysates. Asian Pac J Allergy Immunol 30: 32-39.
-
(2012)
Asian Pac J Allergy Immunol
, vol.30
, pp. 32-39
-
-
Duan, C.1
Huo, G.2
Yang, L.3
Ren, D.4
Chen, J.5
-
20
-
-
19944380461
-
Modification of IGE binding to beta-lactoglobulin by fermentation and proteolysis of cow's milk
-
Ehn B, Allmere T, Telemo E, Bengtsson U, Ekstrand B,. 2005. Modification of IGE binding to beta-lactoglobulin by fermentation and proteolysis of cow's milk. J Agric Food Chem 53: 3743-3748.
-
(2005)
J Agric Food Chem
, vol.53
, pp. 3743-3748
-
-
Ehn, B.1
Allmere, T.2
Telemo, E.3
Bengtsson, U.4
Ekstrand, B.5
-
21
-
-
56749154097
-
Unconventional serine proteases: Variations on the catalytic Ser/His/Asp triad configuration
-
Ekici OD, Paetzel M, Dalbey RE,. 2008. Unconventional serine proteases: Variations on the catalytic Ser/His/Asp triad configuration. Protein Sci 17: 2023-2037.
-
(2008)
Protein Sci
, vol.17
, pp. 2023-2037
-
-
Ekici, O.D.1
Paetzel, M.2
Dalbey, R.E.3
-
22
-
-
0017348682
-
Crystal structure of bovine trypsinogen at 1-8 a resolution. II. Crystallographic refinement, refined crystal structure and comparison with bovine trypsin
-
Fehlhammer H, Bode W, Huber R,. 1977. Crystal structure of bovine trypsinogen at 1-8 a resolution. II. Crystallographic refinement, refined crystal structure and comparison with bovine trypsin. J Mol Biol 111: 415-438.
-
(1977)
J Mol Biol
, vol.111
, pp. 415-438
-
-
Fehlhammer, H.1
Bode, W.2
Huber, R.3
-
23
-
-
34548802987
-
Probability-based pattern recognition and statistical framework for randomization: Modeling tandem mass spectrum/peptide sequence false match frequencies
-
Feng J, Naiman DQ, Cooper B,. 2007. Probability-based pattern recognition and statistical framework for randomization: Modeling tandem mass spectrum/peptide sequence false match frequencies. Bioinformatics 23: 2210-2217.
-
(2007)
Bioinformatics
, vol.23
, pp. 2210-2217
-
-
Feng, J.1
Naiman, D.Q.2
Cooper, B.3
-
24
-
-
33646557331
-
Protein cleavage strategies for an improved analysis of the membrane proteome
-
Fischer F, Poetsch A,. 2006. Protein cleavage strategies for an improved analysis of the membrane proteome. Proteome Sci 4: 2.
-
(2006)
Proteome Sci
, vol.4
, pp. 2
-
-
Fischer, F.1
Poetsch, A.2
-
25
-
-
84871997867
-
Digestion and depletion of abundant proteins improves proteomic coverage
-
Fonslow BR, Stein BD, Webb KJ, Xu T, Choi J, Park SK, Yates JR III., 2013. Digestion and depletion of abundant proteins improves proteomic coverage. Nat Methods 10: 54-56.
-
(2013)
Nat Methods
, vol.10
, pp. 54-56
-
-
Fonslow, B.R.1
Stein, B.D.2
Webb, K.J.3
Xu, T.4
Choi, J.5
Park, S.K.6
Yates III, J.R.7
-
26
-
-
0030623527
-
Probing the partly folded states of proteins by limited proteolysis
-
Fontana A, Polverino de Laureto P, De Filippis V, Scaramella E, Zambonin M,. 1997. Probing the partly folded states of proteins by limited proteolysis. Fold Des 2: R17-R26.
-
(1997)
Fold des
, vol.2
-
-
Fontana, A.1
Polverino De Laureto, P.2
De Filippis, V.3
Scaramella, E.4
Zambonin, M.5
-
27
-
-
0014965896
-
Chymotrypsinogen: 2.5-Angstrom crystal structure, comparison with alpha-chymotrypsin, and implications for zymogen activation
-
Freer ST, Kraut J, Robertus JD, Wright HT, Xuong NH,. 1970. Chymotrypsinogen: 2.5-Angstrom crystal structure, comparison with alpha-chymotrypsin, and implications for zymogen activation. Biochemistry 9: 1997-2009.
-
(1970)
Biochemistry
, vol.9
, pp. 1997-2009
-
-
Freer, S.T.1
Kraut, J.2
Robertus, J.D.3
Wright, H.T.4
Xuong, N.H.5
-
28
-
-
43349083804
-
Using bibliospec for creating and searching tandem ms peptide libraries
-
13.7
-
Frewen B, MacCoss MJ,. 2007. Using bibliospec for creating and searching tandem ms peptide libraries. Curr Protoc Bioinformatics Chapter 13: Unit 13.7.
-
(2007)
Curr Protoc Bioinformatics
, vol.13
-
-
Frewen, B.1
Maccoss, M.J.2
-
29
-
-
7044246160
-
Open mass spectrometry search algorithm
-
Geer LY, Markey SP, Kowalak JA, Wagner L, Xu M, Maynard DM, Yang X, Shi W, Bryant SH,. 2004. Open mass spectrometry search algorithm. J Proteome Res 3: 958-964.
-
(2004)
J Proteome Res
, vol.3
, pp. 958-964
-
-
Geer, L.Y.1
Markey, S.P.2
Kowalak, J.A.3
Wagner, L.4
Xu, M.5
Maynard, D.M.6
Yang, X.7
Shi, W.8
Bryant, S.H.9
-
30
-
-
34548400394
-
A la carte proteomics with an emphasis on gel-free techniques
-
Gevaert K, Van Damme P, Ghesquière B, Impens F, Martens L, Helsens K, Vandekerckhove J,. 2007. A la carte proteomics with an emphasis on gel-free techniques. Proteomics 7: 2698-2718.
-
(2007)
Proteomics
, vol.7
, pp. 2698-2718
-
-
Gevaert, K.1
Van Damme, P.2
Ghesquière, B.3
Impens, F.4
Martens, L.5
Helsens, K.6
Vandekerckhove, J.7
-
31
-
-
84868327851
-
Large-scale quantitative assessment of different in-solution protein digestion protocols reveals superior cleavage efficiency of tandem Lys-C/trypsin proteolysis over trypsin digestion
-
Glatter T, Ludwig C, Ahrne E, Aebersold R, Heck AJR, Schmidt A,. 2012. Large-scale quantitative assessment of different in-solution protein digestion protocols reveals superior cleavage efficiency of tandem Lys-C/trypsin proteolysis over trypsin digestion. J Proteome Res 11: 5145-5156.
-
(2012)
J Proteome Res
, vol.11
, pp. 5145-5156
-
-
Glatter, T.1
Ludwig, C.2
Ahrne, E.3
Aebersold, R.4
Heck, A.J.R.5
Schmidt, A.6
-
32
-
-
0002365131
-
The relationship of structure to the effectiveness of denaturing agents for proteins
-
Gordon JA, Jencks WP,. 1963. The relationship of structure to the effectiveness of denaturing agents for proteins. Biochemistry 2: 47-57.
-
(1963)
Biochemistry
, vol.2
, pp. 47-57
-
-
Gordon, J.A.1
Jencks, W.P.2
-
33
-
-
0022652363
-
Retrograde trypsin instillation into the renal pelvis for the dissolution of obstructive blood clots
-
Grabe M, Forsberg B,. 1986. Retrograde trypsin instillation into the renal pelvis for the dissolution of obstructive blood clots. Eur Urol 12: 69-70.
-
(1986)
Eur Urol
, vol.12
, pp. 69-70
-
-
Grabe, M.1
Forsberg, B.2
-
34
-
-
0016292941
-
Urea and guanidine hydrochloride denaturation of ribonuclease, lysozyme, alpha-chymotrypsin, and beta-lactoglobulin
-
Greene RFJ, Pace CN,. 1974. Urea and guanidine hydrochloride denaturation of ribonuclease, lysozyme, alpha-chymotrypsin, and beta-lactoglobulin. J Biol Chem 249: 5388-5393.
-
(1974)
J Biol Chem
, vol.249
, pp. 5388-5393
-
-
Greene, R.F.J.1
Pace, C.N.2
-
35
-
-
0003115709
-
Trypsin
-
Barrett A.J. Rawlings N.D. Woessner J.F. editors. London: Academic Press.
-
Halfon S, Craik CS,. 1998. Trypsin. In:, Barrett AJ, Rawlings ND, Woessner JF, editors. Handbook of proteolytic enzymes. London: Academic Press. pp. 12-21.
-
(1998)
Handbook of Proteolytic Enzymes
, pp. 12-21
-
-
Halfon, S.1
Craik, C.S.2
-
36
-
-
20644433332
-
Does protein structure influence trypsin miscleavage? Using structural properties to predict the behavior of related proteins
-
Hamady M, Cheung THT, Tufo H, Knight R,. 2005. Does protein structure influence trypsin miscleavage? Using structural properties to predict the behavior of related proteins. IEEE Eng Med Biol Mag 24: 58-66.
-
(2005)
IEEE Eng Med Biol Mag
, vol.24
, pp. 58-66
-
-
Hamady, M.1
Cheung, T.H.T.2
Tufo, H.3
Knight, R.4
-
37
-
-
79951534020
-
Proteomics, human proteome project, and chromosomes
-
Hancock W, Omenn G, Legrain P, Paik Y,. 2011. Proteomics, human proteome project, and chromosomes. J Proteome Res 10: 210.
-
(2011)
J Proteome Res
, vol.10
, pp. 210
-
-
Hancock, W.1
Omenn, G.2
Legrain, P.3
Paik, Y.4
-
38
-
-
0036374351
-
Use of matrix clusters and trypsin autolysis fragments as mass calibrants in matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
-
Harris WA, Janecki DJ, Reilly JP,. 2002. Use of matrix clusters and trypsin autolysis fragments as mass calibrants in matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Commun Mass Spectrom 16: 1714-1722.
-
(2002)
Rapid Commun Mass Spectrom
, vol.16
, pp. 1714-1722
-
-
Harris, W.A.1
Janecki, D.J.2
Reilly, J.P.3
-
39
-
-
0036882394
-
Serine protease mechanism and specificity
-
Hedstrom L,. 2002. Serine protease mechanism and specificity. Chem Rev 102: 4501-4524.
-
(2002)
Chem Rev
, vol.102
, pp. 4501-4524
-
-
Hedstrom, L.1
-
40
-
-
0016606038
-
Separation of human epidermal cells from fibroblasts in primary skin culture
-
Hentzer B, Kobayasi T,. 1975. Separation of human epidermal cells from fibroblasts in primary skin culture. Arch Dermatol Forsch 252: 39-46.
-
(1975)
Arch Dermatol Forsch
, vol.252
, pp. 39-46
-
-
Hentzer, B.1
Kobayasi, T.2
-
41
-
-
34548150256
-
Comparison of digestion protocols for microgram quantities of enriched protein samples
-
Hervey WJ IV, Strader MB, Hurst GB,. 2007. Comparison of digestion protocols for microgram quantities of enriched protein samples. J Proteome Res 6: 3054-3061.
-
(2007)
J Proteome Res
, vol.6
, pp. 3054-3061
-
-
Hervey, I.V.W.J.1
Strader, M.B.2
Hurst, G.B.3
-
42
-
-
33750135655
-
The role of trypsin, trypsin inhibitor, and trypsin receptor in the onset and aggravation of pancreatitis
-
Hirota M, Ohmuraya M, Baba H,. 2006. The role of trypsin, trypsin inhibitor, and trypsin receptor in the onset and aggravation of pancreatitis. J Gastroenterol 41: 832-836.
-
(2006)
J Gastroenterol
, vol.41
, pp. 832-836
-
-
Hirota, M.1
Ohmuraya, M.2
Baba, H.3
-
43
-
-
84864987862
-
The use of selected reaction monitoring in quantitative proteomics
-
Holman SW, Sims PFG, Eyers CE,. 2012. The use of selected reaction monitoring in quantitative proteomics. Bioanalysis 4: 1763-1786.
-
(2012)
Bioanalysis
, vol.4
, pp. 1763-1786
-
-
Holman, S.W.1
Sims, P.F.G.2
Eyers, C.E.3
-
44
-
-
0032539578
-
The structural aspects of limited proteolysis of native proteins
-
Hubbard SJ,. 1998. The structural aspects of limited proteolysis of native proteins. Biochim Biophys Acta 1382: 191-206.
-
(1998)
Biochim Biophys Acta
, vol.1382
, pp. 191-206
-
-
Hubbard, S.J.1
-
45
-
-
66449084442
-
Infrastructure for the life sciences: Design and implementation of the UniProt website
-
Jain E, Bairoch A, Duvaud S, Phan I, Redaschi N, Suzek BE, Martin MJ, McGarvey P, Gasteiger E,. 2009. Infrastructure for the life sciences: Design and implementation of the UniProt website. BMC Bioinformatics 10: 136.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 136
-
-
Jain, E.1
Bairoch, A.2
Duvaud, S.3
Phan, I.4
Redaschi, N.5
Suzek, B.E.6
Martin, M.J.7
McGarvey, P.8
Gasteiger, E.9
-
46
-
-
81855167439
-
Digesting new information about the role of trypsin in pancreatitis
-
Ji B, Logsdon CD,. 2011. Digesting new information about the role of trypsin in pancreatitis. Gastroenterology 141: 1972-1975.
-
(2011)
Gastroenterology
, vol.141
, pp. 1972-1975
-
-
Ji, B.1
Logsdon, C.D.2
-
47
-
-
0018790325
-
The susceptibility to tryptic hydrolysis of peptide bonds involving epsilon-n-methyllysine
-
Joys TM, Kim H,. 1979. The susceptibility to tryptic hydrolysis of peptide bonds involving epsilon-n-methyllysine. Biochim Biophys Acta 581: 360-362.
-
(1979)
Biochim Biophys Acta
, vol.581
, pp. 360-362
-
-
Joys, T.M.1
Kim, H.2
-
48
-
-
38649083118
-
Assigning significance to peptides identified by tandem mass spectrometry using decoy databases
-
Käll L, Storey JD, MacCoss MJ, Noble WS,. 2008. Assigning significance to peptides identified by tandem mass spectrometry using decoy databases. J Proteome Res 7: 29-34.
-
(2008)
J Proteome Res
, vol.7
, pp. 29-34
-
-
Käll, L.1
Storey, J.D.2
Maccoss, M.J.3
Noble, W.S.4
-
50
-
-
0015150785
-
The autoactivation of trypsinogen
-
Kay J, Kassell B,. 1971. The autoactivation of trypsinogen. J Biol Chem 246: 6661-6665.
-
(1971)
J Biol Chem
, vol.246
, pp. 6661-6665
-
-
Kay, J.1
Kassell, B.2
-
51
-
-
0004214986
-
-
Berlin - Heidelberg - New York: Springer-Verlag.
-
Keil B,. 1992. Specificity of proteolysis. Berlin-Heidelberg-New York: Springer-Verlag.
-
(1992)
Specificity of Proteolysis
-
-
Keil, B.1
-
52
-
-
84885677869
-
-
Verhanlungen des naturhistorisch-medicischen vereins zu Heidelberg
-
Keuhne W,. 1877. Uber das trypsin (enzym des pankreas). Verhanlungen des naturhistorisch-medicischen vereins zu Heidelberg, Vol. 1. pp. 194-198.
-
(1877)
Uber das Trypsin (Enzym des Pankreas)
, vol.1
, pp. 194-198
-
-
Keuhne, W.1
-
53
-
-
0021869258
-
Comparative effects of trypsin, collagenase and mechanical harvesting on cell membrane lipids studied in monolayer-cultured endothelial cells and a green monkey kidney cell line
-
Kirkpatrick CJ, Melzner I, Göller T,. 1985. Comparative effects of trypsin, collagenase and mechanical harvesting on cell membrane lipids studied in monolayer-cultured endothelial cells and a green monkey kidney cell line. Biochim Biophys Acta 846: 120-126.
-
(1985)
Biochim Biophys Acta
, vol.846
, pp. 120-126
-
-
Kirkpatrick, C.J.1
Melzner, I.2
Göller, T.3
-
54
-
-
33644856320
-
Effects of modified digestion schemes on the identification of proteins from complex mixtures
-
Klammer AA, MacCoss MJ,. 2006. Effects of modified digestion schemes on the identification of proteins from complex mixtures. J Proteome Res 5: 695-700.
-
(2006)
J Proteome Res
, vol.5
, pp. 695-700
-
-
Klammer, A.A.1
Maccoss, M.J.2
-
55
-
-
0004039292
-
-
New York and London: Academic Press.
-
Kraut J,. 1971. The enzymes. New York and London: Academic Press. pp 165-183.
-
(1971)
The Enzymes
, pp. 165-183
-
-
Kraut, J.1
-
56
-
-
11744372696
-
Formation of trypsin from crystalline trypsinogen by means of enterokinase
-
Kunitz M,. 1939. Formation of trypsin from crystalline trypsinogen by means of enterokinase. J Gen Physiol 22: 429-446.
-
(1939)
J Gen Physiol
, vol.22
, pp. 429-446
-
-
Kunitz, M.1
-
57
-
-
54049090766
-
Selected reaction monitoring for quantitative proteomics: A tutorial
-
Lange V, Picotti P, Domon B, Aebersold R,. 2008. Selected reaction monitoring for quantitative proteomics: A tutorial. Mol Syst Biol 4: 222.
-
(2008)
Mol Syst Biol
, vol.4
, pp. 222
-
-
Lange, V.1
Picotti, P.2
Domon, B.3
Aebersold, R.4
-
58
-
-
43049130709
-
Sodium-deoxycholate-assisted tryptic digestion and identification of proteolytically resistant proteins
-
Lin Y, Zhou J, Bi D, Chen P, Wang X, Liang S,. 2008. Sodium-deoxycholate- assisted tryptic digestion and identification of proteolytically resistant proteins. Anal Biochem 377: 259-266.
-
(2008)
Anal Biochem
, vol.377
, pp. 259-266
-
-
Lin, Y.1
Zhou, J.2
Bi, D.3
Chen, P.4
Wang, X.5
Liang, S.6
-
59
-
-
23944526367
-
Pride: The proteomics identifications database
-
Martens L, Hermjakob H, Jones P, Adamski M, Taylor C, States D, Gevaert K, Vandekerckhove J, Apweiler R,. 2005. Pride: The proteomics identifications database. Proteomics 5: 3537-3545.
-
(2005)
Proteomics
, vol.5
, pp. 3537-3545
-
-
Martens, L.1
Hermjakob, H.2
Jones, P.3
Adamski, M.4
Taylor, C.5
States, D.6
Gevaert, K.7
Vandekerckhove, J.8
Apweiler, R.9
-
60
-
-
24144480557
-
DBToolkit: Processing protein databases for peptide-centric proteomics
-
Martens L, Vandekerckhove J, Gevaert K,. 2005. DBToolkit: Processing protein databases for peptide-centric proteomics. Bioinformatics 21: 3584-3585.
-
(2005)
Bioinformatics
, vol.21
, pp. 3584-3585
-
-
Martens, L.1
Vandekerckhove, J.2
Gevaert, K.3
-
61
-
-
77951642860
-
Shotgun proteomics: Concept, key points and data mining
-
Matallana-Surget S, Leroy B, Wattiez R,. 2010. Shotgun proteomics: Concept, key points and data mining. Expert Rev Proteomics 7: 5-7.
-
(2010)
Expert Rev Proteomics
, vol.7
, pp. 5-7
-
-
Matallana-Surget, S.1
Leroy, B.2
Wattiez, R.3
-
62
-
-
38949141744
-
High-performance proteomics as a tool in biomarker discovery
-
(Suppl. 1).
-
Meyer HE, Stühler K,. 2007. High-performance proteomics as a tool in biomarker discovery. Proteomics 7 (Suppl. 1): 18-26.
-
(2007)
Proteomics
, vol.7
, pp. 18-26
-
-
Meyer, H.E.1
Stühler, K.2
-
63
-
-
0028090516
-
Proteolytic enzymes past and present: The second golden era. Recollections, special section in honor of Max Perutz
-
Neurath H,. 1994. Proteolytic enzymes past and present: The second golden era. recollections, special section in honor of Max Perutz. Protein Sci 3: 1734-1739.
-
(1994)
Protein Sci
, vol.3
, pp. 1734-1739
-
-
Neurath, H.1
-
64
-
-
0027933068
-
Molecular cloning of a potential proteinase activated receptor
-
Nystedt S, Emilsson K, Wahlestedt C, Sundelin J,. 1994. Molecular cloning of a potential proteinase activated receptor. Proc Natl Acad Sci USA 91: 9208-9212.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 9208-9212
-
-
Nystedt, S.1
Emilsson, K.2
Wahlestedt, C.3
Sundelin, J.4
-
65
-
-
3042815334
-
Trypsin cleaves exclusively C-terminal to arginine and lysine residues
-
Olsen JV, Ong S, Mann M,. 2004. Trypsin cleaves exclusively C-terminal to arginine and lysine residues. Mol Cell Proteomics 3: 608-614.
-
(2004)
Mol Cell Proteomics
, vol.3
, pp. 608-614
-
-
Olsen, J.V.1
Ong, S.2
Mann, M.3
-
66
-
-
0014010688
-
Implication of an ionizing group in the control of conformation and activity of chymotrypsin
-
Oppenheimer HL, Labouesse B, Hess GP,. 1966. Implication of an ionizing group in the control of conformation and activity of chymotrypsin. J Biol Chem 241: 2720-2730.
-
(1966)
J Biol Chem
, vol.241
, pp. 2720-2730
-
-
Oppenheimer, H.L.1
Labouesse, B.2
Hess, G.P.3
-
67
-
-
0032726294
-
Common protein architecture and binding sites in proteases utilizing a Ser/Lys dyad mechanism
-
Paetzel M, Strynadka NC,. 1999. Common protein architecture and binding sites in proteases utilizing a Ser/Lys dyad mechanism. Protein Sci 8: 2533-2536.
-
(1999)
Protein Sci
, vol.8
, pp. 2533-2536
-
-
Paetzel, M.1
Strynadka, N.C.2
-
68
-
-
57649165535
-
Evolution of peptidase diversity
-
Page MJ, Di Cera E,. 2008. Evolution of peptidase diversity. J Biol Chem 283: 30010-30014.
-
(2008)
J Biol Chem
, vol.283
, pp. 30010-30014
-
-
Page, M.J.1
Di Cera, E.2
-
69
-
-
84863229647
-
The chromosome-centric human proteome project for cataloging proteins encoded in the genome
-
Paik Y, Jeong S, Omenn GS, Uhlen M, Hanash S, Cho SY, Lee H, Na K, Choi E, Yan F, Zhang F, Zhang Y, Snyder M, Cheng Y, Chen R, Marko-Varga G, Deutsch EW, Kim H, Kwon J, Aebersold R, Bairoch A, Taylor AD, Kim KY, Lee E, Hochstrasser D, Legrain P, Hancock WS,. 2012. The chromosome-centric human proteome project for cataloging proteins encoded in the genome. Nat Biotechnol 30: 221-223.
-
(2012)
Nat Biotechnol
, vol.30
, pp. 221-223
-
-
Paik, Y.1
Jeong, S.2
Omenn, G.S.3
Uhlen, M.4
Hanash, S.5
Cho, S.Y.6
Lee, H.7
Na, K.8
Choi, E.9
Yan, F.10
Zhang, F.11
Zhang, Y.12
Snyder, M.13
Cheng, Y.14
Chen, R.15
Marko-Varga, G.16
Deutsch, E.W.17
Kim, H.18
Kwon, J.19
Aebersold, R.20
Bairoch, A.21
Taylor, A.D.22
Kim, K.Y.23
Lee, E.24
Hochstrasser, D.25
Legrain, P.26
Hancock, W.S.27
more..
-
70
-
-
84859622404
-
Standard guidelines for the chromosome-centric human proteome project
-
Paik Y, Omenn GS, Uhlen M, Hanash S, Marko-Varga G, Aebersold R, Bairoch A, Yamamoto T, Legrain P, Lee H, Na K, Jeong S, He F, Binz P, Nishimura T, Keown P, Baker MS, Yoo JS, Garin J, Archakov A, Bergeron J, Salekdeh GH, Hancock WS,. 2012. Standard guidelines for the chromosome-centric human proteome project. J Proteome Res 11: 2005-2013.
-
(2012)
J Proteome Res
, vol.11
, pp. 2005-2013
-
-
Paik, Y.1
Omenn, G.S.2
Uhlen, M.3
Hanash, S.4
Marko-Varga, G.5
Aebersold, R.6
Bairoch, A.7
Yamamoto, T.8
Legrain, P.9
Lee, H.10
Na, K.11
Jeong, S.12
He, F.13
Binz, P.14
Nishimura, T.15
Keown, P.16
Baker, M.S.17
Yoo, J.S.18
Garin, J.19
Archakov, A.20
Bergeron, J.21
Salekdeh, G.H.22
Hancock, W.S.23
more..
-
71
-
-
6344280371
-
Proteomic analyses using an accurate mass and time tag strategy
-
626-633, 636 passim.
-
Pasa-Tolic̈ L, Masselon C, Barry RC, Shen Y, Smith RD,. 2004. Proteomic analyses using an accurate mass and time tag strategy. Biotechniques 37: 621-624, 626-633, 636 passim.
-
(2004)
Biotechniques
, vol.37
, pp. 621-624
-
-
Pasa-Tolic̈, L.1
Masselon, C.2
Barry, R.C.3
Shen, Y.4
Smith, R.D.5
-
72
-
-
0033434080
-
Probability-based protein identification by searching sequence databases using mass spectrometry data
-
Perkins DN, Pappin DJ, Creasy DM, Cottrell JS,. 1999. Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20: 3551-3567.
-
(1999)
Electrophoresis
, vol.20
, pp. 3551-3567
-
-
Perkins, D.N.1
Pappin, D.J.2
Creasy, D.M.3
Cottrell, J.S.4
-
73
-
-
27144523783
-
The catalytic triad of serine peptidases
-
Polgár L,. 2005. The catalytic triad of serine peptidases. Cell Mol Life Sci 62: 2161-2172.
-
(2005)
Cell Mol Life Sci
, vol.62
, pp. 2161-2172
-
-
Polgár, L.1
-
74
-
-
0021099120
-
The resistance to tryptic hydrolysis of peptide bonds adjacent to N epsilon, N-dimethyllysyl residues
-
Poncz L, Dearborn DG,. 1983. The resistance to tryptic hydrolysis of peptide bonds adjacent to N epsilon, N-dimethyllysyl residues. J Biol Chem 258: 1844-1850.
-
(1983)
J Biol Chem
, vol.258
, pp. 1844-1850
-
-
Poncz, L.1
Dearborn, D.G.2
-
75
-
-
69249208535
-
Cell-based proteome analysis: The first stage in the pipeline for biomarker discovery
-
Poschmann G, Sitek B, Sipos B, Hamacher M, Vonend O, Meyer HE, Stühler K,. 2009. Cell-based proteome analysis: The first stage in the pipeline for biomarker discovery. Biochim Biophys Acta 1794: 1309-1316.
-
(2009)
Biochim Biophys Acta
, vol.1794
, pp. 1309-1316
-
-
Poschmann, G.1
Sitek, B.2
Sipos, B.3
Hamacher, M.4
Vonend, O.5
Meyer, H.E.6
Stühler, K.7
-
76
-
-
77957344363
-
A quantitative study of the effects of chaotropic agents, surfactants, and solvents on the digestion efficiency of human plasma proteins by trypsin
-
Proc JL, Kuzyk MA, Hardie DB, Yang J, Smith DS, Jackson AM, Parker CE, Borchers CH,. 2010. A quantitative study of the effects of chaotropic agents, surfactants, and solvents on the digestion efficiency of human plasma proteins by trypsin. J Proteome Res 9: 5422-5437.
-
(2010)
J Proteome Res
, vol.9
, pp. 5422-5437
-
-
Proc, J.L.1
Kuzyk, M.A.2
Hardie, D.B.3
Yang, J.4
Smith, D.S.5
Jackson, A.M.6
Parker, C.E.7
Borchers, C.H.8
-
77
-
-
77956114532
-
Is a gene-centric human proteome project the best way for proteomics to serve biology
-
Rabilloud T, Hochstrasser D, Simpson RJ,. 2010. Is a gene-centric human proteome project the best way for proteomics to serve biology ? Proteomics 10: 3067-3072.
-
(2010)
Proteomics
, vol.10
, pp. 3067-3072
-
-
Rabilloud, T.1
Hochstrasser, D.2
Simpson, R.J.3
-
78
-
-
78549293591
-
Cleavage specificities of the brother and sister proteases Lys-C and Lys-N
-
Raijmakers R, Neerincx P, Mohammed S, Heck AJR,. 2010. Cleavage specificities of the brother and sister proteases Lys-C and Lys-N. Chem Commun (Camb) 46: 8827-8829.
-
(2010)
Chem Commun (Camb)
, vol.46
, pp. 8827-8829
-
-
Raijmakers, R.1
Neerincx, P.2
Mohammed, S.3
Heck, A.J.R.4
-
80
-
-
84859426282
-
MEROPS: The database of proteolytic enzymes, their substrates and inhibitors
-
Rawlings ND, Barrett AJ, Bateman A,. 2012. MEROPS: The database of proteolytic enzymes, their substrates and inhibitors. Nucleic Acids Res 40: D343-D350.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Rawlings, N.D.1
Barrett, A.J.2
Bateman, A.3
-
81
-
-
84866127272
-
Bioinformatic challenges in targeted proteomics
-
Reker D, Malmström L,. 2012. Bioinformatic challenges in targeted proteomics. J Proteome Res 11: 4393-4402.
-
(2012)
J Proteome Res
, vol.11
, pp. 4393-4402
-
-
Reker, D.1
Malmström, L.2
-
82
-
-
0017375309
-
Stabilization of bovine trypsin by reductive methylation
-
Rice RH, Means GE, Brown WD,. 1977. Stabilization of bovine trypsin by reductive methylation. Biochim Biophys Acta 492: 316-321.
-
(1977)
Biochim Biophys Acta
, vol.492
, pp. 316-321
-
-
Rice, R.H.1
Means, G.E.2
Brown, W.D.3
-
83
-
-
38649098134
-
Does trypsin cut before proline
-
Rodriguez J, Gupta N, Smith RD, Pevzner PA,. 2008. Does trypsin cut before proline ? J Proteome Res 7: 300-305.
-
(2008)
J Proteome Res
, vol.7
, pp. 300-305
-
-
Rodriguez, J.1
Gupta, N.2
Smith, R.D.3
Pevzner, P.A.4
-
84
-
-
16644382316
-
Multiple effects of N-alpha-tosyl-L-phenylalanyl chloromethyl ketone (TPCK) on apoptotic pathways in human prostatic carcinoma cell lines
-
Rokhlin OW, Guseva NV, Taghiyev AF, Glover RA, Cohen MB,. 2004. Multiple effects of N-alpha-tosyl-L-phenylalanyl chloromethyl ketone (TPCK) on apoptotic pathways in human prostatic carcinoma cell lines. Cancer Biol Ther 3: 761-768.
-
(2004)
Cancer Biol Ther
, vol.3
, pp. 761-768
-
-
Rokhlin, O.W.1
Guseva, N.V.2
Taghiyev, A.F.3
Glover, R.A.4
Cohen, M.B.5
-
85
-
-
0015901579
-
Structure of the complex formed by bovine trypsin and bovine pancreatic trypsin inhibitor. Crystal structure determination and stereochemistry of the contact region
-
Rühlmann A, Kukla D, Schwager P, Bartels K, Huber R,. 1973. Structure of the complex formed by bovine trypsin and bovine pancreatic trypsin inhibitor. Crystal structure determination and stereochemistry of the contact region. J Mol Biol 77: 417-436.
-
(1973)
J Mol Biol
, vol.77
, pp. 417-436
-
-
Rühlmann, A.1
Kukla, D.2
Schwager, P.3
Bartels, K.4
Huber, R.5
-
86
-
-
18744398125
-
Large-scale database searching using tandem mass spectra: Looking up the answer in the back of the book
-
Sadygov RG, Cociorva D, Yates JR III., 2004. Large-scale database searching using tandem mass spectra: Looking up the answer in the back of the book. Nat Methods 1: 195-202.
-
(2004)
Nat Methods
, vol.1
, pp. 195-202
-
-
Sadygov, R.G.1
Cociorva, D.2
Yates III, J.R.3
-
87
-
-
0014211618
-
On the size of the active site in proteases. I. Papain
-
Schechter I, Berger A,. 1967. On the size of the active site in proteases. I. Papain. Biochem Biophys Res Commun 27: 157-162.
-
(1967)
Biochem Biophys Res Commun
, vol.27
, pp. 157-162
-
-
Schechter, I.1
Berger, A.2
-
88
-
-
23744504888
-
Mapping of phosphorylation sites by a multi-protease approach with specific phosphopeptide enrichment and NanoLC-Ms/Ms analysis
-
Schlosser A, Vanselow JT, Kramer A,. 2005. Mapping of phosphorylation sites by a multi-protease approach with specific phosphopeptide enrichment and NanoLC-Ms/Ms analysis. Anal Chem 77: 5243-5250.
-
(2005)
Anal Chem
, vol.77
, pp. 5243-5250
-
-
Schlosser, A.1
Vanselow, J.T.2
Kramer, A.3
-
89
-
-
57749194896
-
Trypsin is the culprit of multiple organ injury with severe acute pancreatitis
-
Sha H, Ma Q, Jha RK,. 2009. Trypsin is the culprit of multiple organ injury with severe acute pancreatitis. Med Hypotheses 72: 180-182.
-
(2009)
Med Hypotheses
, vol.72
, pp. 180-182
-
-
Sha, H.1
Ma, Q.2
Jha, R.K.3
-
90
-
-
0014965504
-
Three-dimensional structure of tosyl-elastase
-
Shotton DM, Watson HC,. 1970. Three-dimensional structure of tosyl-elastase. Nature 225: 811-816.
-
(1970)
Nature
, vol.225
, pp. 811-816
-
-
Shotton, D.M.1
Watson, H.C.2
-
91
-
-
33846632267
-
Prediction of missed cleavage sites in tryptic peptides aids protein identification in proteomics
-
Siepen JA, Keevil E, Knight D, Hubbard SJ,. 2007. Prediction of missed cleavage sites in tryptic peptides aids protein identification in proteomics. J Proteome Res 6: 399-408.
-
(2007)
J Proteome Res
, vol.6
, pp. 399-408
-
-
Siepen, J.A.1
Keevil, E.2
Knight, D.3
Hubbard, S.J.4
-
92
-
-
66749131489
-
Reversible inactivation of trypsin by anhydrous formic acid
-
Smillie LB, Neurath H,. 1959. Reversible inactivation of trypsin by anhydrous formic acid. J Biol Chem 234: 355-359.
-
(1959)
J Biol Chem
, vol.234
, pp. 355-359
-
-
Smillie, L.B.1
Neurath, H.2
-
93
-
-
0036253914
-
An accurate mass tag strategy for quantitative and high-throughput proteome measurements
-
Smith RD, Anderson GA, Lipton MS, Pasa-Tolic L, Shen Y, Conrads TP, Veenstra TD, Udseth HR,. 2002. An accurate mass tag strategy for quantitative and high-throughput proteome measurements. Proteomics 2: 513-523.
-
(2002)
Proteomics
, vol.2
, pp. 513-523
-
-
Smith, R.D.1
Anderson, G.A.2
Lipton, M.S.3
Pasa-Tolic, L.4
Shen, Y.5
Conrads, T.P.6
Veenstra, T.D.7
Udseth, H.R.8
-
94
-
-
61449210913
-
A protocol for isolation and culture of mesenchymal stem cells from mouse bone marrow
-
Soleimani M, Nadri S,. 2009. A protocol for isolation and culture of mesenchymal stem cells from mouse bone marrow. Nat Protoc 4: 102-106.
-
(2009)
Nat Protoc
, vol.4
, pp. 102-106
-
-
Soleimani, M.1
Nadri, S.2
-
95
-
-
0023161184
-
The three-dimensional structure of Asn102 mutant of trypsin: Role of Asp102 in serine protease catalysis
-
Sprang S, Standing T, Fletterick RJ, Stroud RM, Finer-Moore J, Xuong NH, Hamlin R, Rutter WJ, Craik CS,. 1987. The three-dimensional structure of Asn102 mutant of trypsin: Role of Asp102 in serine protease catalysis. Science 237: 905-909.
-
(1987)
Science
, vol.237
, pp. 905-909
-
-
Sprang, S.1
Standing, T.2
Fletterick, R.J.3
Stroud, R.M.4
Finer-Moore, J.5
Xuong, N.H.6
Hamlin, R.7
Rutter, W.J.8
Craik, C.S.9
-
96
-
-
4444271864
-
Global differential non-gel proteomics by quantitative and stable labeling of tryptic peptides with oxygen-18
-
Staes A, Demol H, Van Damme J, Martens L, Vandekerckhove J, Gevaert K,. 2004. Global differential non-gel proteomics by quantitative and stable labeling of tryptic peptides with oxygen-18. J Proteome Res 3: 786-791.
-
(2004)
J Proteome Res
, vol.3
, pp. 786-791
-
-
Staes, A.1
Demol, H.2
Van Damme, J.3
Martens, L.4
Vandekerckhove, J.5
Gevaert, K.6
-
97
-
-
0033971235
-
Agonists of proteinase-activated receptor 2 induce inflammation by a neurogenic mechanism
-
Steinhoff M, Vergnolle N, Young SH, Tognetto M, Amadesi S, Ennes HS, Trevisani M, Hollenberg MD, Wallace JL, Caughey GH, Mitchell SE, Williams LM, Geppetti P, Mayer EA, Bunnett NW,. 2000. Agonists of proteinase-activated receptor 2 induce inflammation by a neurogenic mechanism. Nat Med 6: 151-158.
-
(2000)
Nat Med
, vol.6
, pp. 151-158
-
-
Steinhoff, M.1
Vergnolle, N.2
Young, S.H.3
Tognetto, M.4
Amadesi, S.5
Ennes, H.S.6
Trevisani, M.7
Hollenberg, M.D.8
Wallace, J.L.9
Caughey, G.H.10
Mitchell, S.E.11
Williams, L.M.12
Geppetti, P.13
Mayer, E.A.14
Bunnett, N.W.15
-
98
-
-
77949786295
-
Value of using multiple proteases for large-scale mass spectrometry-based proteomics
-
Swaney DL, Wenger CD, Coon JJ,. 2010. Value of using multiple proteases for large-scale mass spectrometry-based proteomics. J Proteome Res 9: 1323-1329.
-
(2010)
J Proteome Res
, vol.9
, pp. 1323-1329
-
-
Swaney, D.L.1
Wenger, C.D.2
Coon, J.J.3
-
99
-
-
1442324456
-
Influence of basic residue content on fragment ion peak intensities in low-energy collision-induced dissociation spectra of peptides
-
Tabb DL, Huang Y, Wysocki VH, Yates JR III., 2004. Influence of basic residue content on fragment ion peak intensities in low-energy collision-induced dissociation spectra of peptides. Anal Chem 76: 1243-1248.
-
(2004)
Anal Chem
, vol.76
, pp. 1243-1248
-
-
Tabb, D.L.1
Huang, Y.2
Wysocki, V.H.3
Yates III, J.R.4
-
100
-
-
0034060128
-
Analysis of missed cleavage sites, tryptophan oxidation and N-terminal pyroglutamylation after in-gel tryptic digestion
-
Thiede B, Lamer S, Mattow J, Siejak F, Dimmler C, Rudel T, Jungblut PR,. 2000. Analysis of missed cleavage sites, tryptophan oxidation and N-terminal pyroglutamylation after in-gel tryptic digestion. Rapid Commun Mass Spectrom 14: 496-502.
-
(2000)
Rapid Commun Mass Spectrom
, vol.14
, pp. 496-502
-
-
Thiede, B.1
Lamer, S.2
Mattow, J.3
Siejak, F.4
Dimmler, C.5
Rudel, T.6
Jungblut, P.R.7
-
101
-
-
42049098165
-
Shedding & shaving: Disclosure of proteomic expressions on a bacterial face
-
Tjalsma H, Lambooy L, Hermans PW, Swinkels DW,. 2008. Shedding & shaving: Disclosure of proteomic expressions on a bacterial face. Proteomics 8: 1415-1428.
-
(2008)
Proteomics
, vol.8
, pp. 1415-1428
-
-
Tjalsma, H.1
Lambooy, L.2
Hermans, P.W.3
Swinkels, D.W.4
-
102
-
-
0014211078
-
Chymotrypsin c. 3. Sequence of amino acids around an essential histidine residue
-
Tobita T, Folk JE,. 1967. Chymotrypsin c. 3. Sequence of amino acids around an essential histidine residue. Biochim Biophys Acta 147: 15-25.
-
(1967)
Biochim Biophys Acta
, vol.147
, pp. 15-25
-
-
Tobita, T.1
Folk, J.E.2
-
103
-
-
0036084260
-
Comparison of protein fragments identified by limited proteolysis and by computational cutting of proteins
-
Tsai C, Polverino de Laureto P, Fontana A, Nussinov R,. 2002. Comparison of protein fragments identified by limited proteolysis and by computational cutting of proteins. Protein Sci 11: 1753-1770.
-
(2002)
Protein Sci
, vol.11
, pp. 1753-1770
-
-
Tsai, C.1
Polverino De Laureto, P.2
Fontana, A.3
Nussinov, R.4
-
104
-
-
78651319979
-
Ongoing and future developments at the universal protein resource
-
Uniprot Consortium.
-
Uniprot Consortium. 2011. Ongoing and future developments at the universal protein resource. Nucleic Acids Res 39: D214-D219.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
-
106
-
-
84864557511
-
Cell surface shaving of Candida albicans biofilms, hyphae, and yeast form cells
-
Vialás V, Perumal P, Gutierrez D, Ximénez-Embún P, Nombela C, Gil C, Chaffin WL,. 2012. Cell surface shaving of Candida albicans biofilms, hyphae, and yeast form cells. Proteomics 12: 2331-2339.
-
(2012)
Proteomics
, vol.12
, pp. 2331-2339
-
-
Vialás, V.1
Perumal, P.2
Gutierrez, D.3
Ximénez-Embún, P.4
Nombela, C.5
Gil, C.6
Chaffin, W.L.7
-
107
-
-
70349091863
-
A guide to the proteomics identifications database proteomics data repository
-
Vizcaíno JA, Côté R, Reisinger F, Foster JM, Mueller M, Rameseder J, Hermjakob H, Martens L,. 2009. A guide to the proteomics identifications database proteomics data repository. Proteomics 9: 4276-4283.
-
(2009)
Proteomics
, vol.9
, pp. 4276-4283
-
-
Vizcaíno, J.A.1
Côté, R.2
Reisinger, F.3
Foster, J.M.4
Mueller, M.5
Rameseder, J.6
Hermjakob, H.7
Martens, L.8
-
109
-
-
0037341910
-
The effect of hydrolyzed cow's milk formula for allergy prevention in the first year of life: The German Infant Nutritional Intervention Study, a randomized double-blind trial
-
von Berg A, Koletzko S, Grübl A, Filipiak-Pittroff B, Wichmann H, Bauer CP, Reinhardt D, Berdel D,. 2003. The effect of hydrolyzed cow's milk formula for allergy prevention in the first year of life: The German Infant Nutritional Intervention Study, a randomized double-blind trial. J Allergy Clin Immunol 111: 533-540.
-
(2003)
J Allergy Clin Immunol
, vol.111
, pp. 533-540
-
-
Von Berg, A.1
Koletzko, S.2
Grübl, A.3
Filipiak-Pittroff, B.4
Wichmann, H.5
Bauer, C.P.6
Reinhardt, D.7
Berdel, D.8
-
110
-
-
0034668196
-
Kinetics of beta-casein hydrolysis by wild-type and engineered trypsin
-
Vorob'ev MM, Dalgalarrondo M, Chobert J, Haertlé T,. 2000. Kinetics of beta-casein hydrolysis by wild-type and engineered trypsin. Biopolymers 54: 355-364.
-
(2000)
Biopolymers
, vol.54
, pp. 355-364
-
-
Vorob'Ev, M.M.1
Dalgalarrondo, M.2
Chobert, J.3
Haertlé, T.4
-
111
-
-
0026035523
-
Molecular cloning of a functional thrombin receptor reveals a novel proteolytic mechanism of receptor activation
-
Vu TK, Hung DT, Wheaton VI, Coughlin SR,. 1991. Molecular cloning of a functional thrombin receptor reveals a novel proteolytic mechanism of receptor activation. Cell 64: 1057-1068.
-
(1991)
Cell
, vol.64
, pp. 1057-1068
-
-
Vu, T.K.1
Hung, D.T.2
Wheaton, V.I.3
Coughlin, S.R.4
-
112
-
-
0000119209
-
Trypsinogen and chymotrypsinogen as homologous proteins
-
Walsh KA, Neurath H,. 1964. Trypsinogen and chymotrypsinogen as homologous proteins. Proc Natl Acad Sci USA 52: 884-889.
-
(1964)
Proc Natl Acad Sci USA
, vol.52
, pp. 884-889
-
-
Walsh, K.A.1
Neurath, H.2
-
113
-
-
0001141858
-
On the disordered activation domain in trypsinogen: Chemical labelling and low-temperature crystallography
-
Walter J, Steigemann W, Singh T, Bartunik H, Bode W, Huber R,. 1982. On the disordered activation domain in trypsinogen: Chemical labelling and low-temperature crystallography. Acta Cryst B38: 1462-1472.
-
(1982)
Acta Cryst
, vol.B38
, pp. 1462-1472
-
-
Walter, J.1
Steigemann, W.2
Singh, T.3
Bartunik, H.4
Bode, W.5
Huber, R.6
-
114
-
-
77955876447
-
Mass spectrometry-based proteomics in cell biology
-
Walther TC, Mann M,. 2010. Mass spectrometry-based proteomics in cell biology. J Cell Biol 190: 491-500.
-
(2010)
J Cell Biol
, vol.190
, pp. 491-500
-
-
Walther, T.C.1
Mann, M.2
-
115
-
-
0035106351
-
Large-scale analysis of the yeast proteome by multidimensional protein identification technology
-
Washburn MP, Wolters D, Yates JR III., 2001. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat Biotechnol 19: 242-247.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 242-247
-
-
Washburn, M.P.1
Wolters, D.2
Yates III, J.R.3
-
116
-
-
0014028911
-
The enzymic activity of trypsin autolysis products
-
Weil L, Timasheff SN,. 1966. The enzymic activity of trypsin autolysis products. Arch Biochem Biophys 116: 252-254.
-
(1966)
Arch Biochem Biophys
, vol.116
, pp. 252-254
-
-
Weil, L.1
Timasheff, S.N.2
-
117
-
-
33847736584
-
Human pancreatic digestive enzymes
-
Whitcomb DC, Lowe ME,. 2007. Human pancreatic digestive enzymes. Dig Dis Sci 52: 1-17.
-
(2007)
Dig Dis Sci
, vol.52
, pp. 1-17
-
-
Whitcomb, D.C.1
Lowe, M.E.2
-
118
-
-
67349266694
-
Universal sample preparation method for proteome analysis
-
Wiśniewski JR, Zougman A, Nagaraj N, Mann M,. 2009. Universal sample preparation method for proteome analysis. Nat Methods 6: 359-362.
-
(2009)
Nat Methods
, vol.6
, pp. 359-362
-
-
Wiśniewski, J.R.1
Zougman, A.2
Nagaraj, N.3
Mann, M.4
-
119
-
-
0017591757
-
Secondary and conformational specificities of trypsin and chymotrypsin
-
Wright HT,. 1977. Secondary and conformational specificities of trypsin and chymotrypsin. Eur J Biochem 73: 567-578.
-
(1977)
Eur J Biochem
, vol.73
, pp. 567-578
-
-
Wright, H.T.1
-
120
-
-
33144462895
-
Improving sensitivity in shotgun proteomics using a peptide-centric database with reduced complexity: Protease cleavage and SCX elution rules from data mining of MS/MS spectra
-
Yen C, Russell S, Mendoza AM, Meyer-Arendt K, Sun S, Cios KJ, Ahn NG, Resing KA,. 2006. Improving sensitivity in shotgun proteomics using a peptide-centric database with reduced complexity: Protease cleavage and SCX elution rules from data mining of MS/MS spectra. Anal Chem 78: 1071-1084.
-
(2006)
Anal Chem
, vol.78
, pp. 1071-1084
-
-
Yen, C.1
Russell, S.2
Mendoza, A.M.3
Meyer-Arendt, K.4
Sun, S.5
Cios, K.J.6
Ahn, N.G.7
Resing, K.A.8
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