-
1
-
-
84857226999
-
KNApSAcK family databases: integrated metabolite-plant species databases for multifaceted plant research
-
Afendi F.M., Okada T., Yamazaki M., Hirai-Morita A., Nakamura Y., Nakamura K., Ikeda S., Takahashi H., Altaf-Ul-Amin M., Darusman L.K., et al. KNApSAcK family databases: integrated metabolite-plant species databases for multifaceted plant research. Plant Cell Physiol 2012, 53:e1.
-
(2012)
Plant Cell Physiol
, vol.53
-
-
Afendi, F.M.1
Okada, T.2
Yamazaki, M.3
Hirai-Morita, A.4
Nakamura, Y.5
Nakamura, K.6
Ikeda, S.7
Takahashi, H.8
Altaf-Ul-Amin, M.9
Darusman, L.K.10
-
2
-
-
70350214653
-
Functional genomics for plant natural product biosynthesis
-
Yonekura-Sakakibara K., Saito K. Functional genomics for plant natural product biosynthesis. Nat Prod Rep 2009, 26:1466-1487.
-
(2009)
Nat Prod Rep
, vol.26
, pp. 1466-1487
-
-
Yonekura-Sakakibara, K.1
Saito, K.2
-
3
-
-
77951880802
-
Metabolomics for functional genomics, systems biology, and biotechnology
-
Saito K., Matsuda F. Metabolomics for functional genomics, systems biology, and biotechnology. Annu Rev Plant Biol 2010, 61:463-489.
-
(2010)
Annu Rev Plant Biol
, vol.61
, pp. 463-489
-
-
Saito, K.1
Matsuda, F.2
-
4
-
-
78650173423
-
Computational mass spectrometry for metabolomics: identification of metabolites and small molecules
-
Neumann S., Böcker S. Computational mass spectrometry for metabolomics: identification of metabolites and small molecules. Anal Bioanal Chem 2010, 398:2779-2788.
-
(2010)
Anal Bioanal Chem
, vol.398
, pp. 2779-2788
-
-
Neumann, S.1
Böcker, S.2
-
5
-
-
77954439868
-
MassBank: a public repository for sharing mass spectral data for life sciences
-
Horai H., Arita M., Kanaya S., Nihei Y., Ikeda T., Suwa K., Ojima Y., Tanaka K., Tanaka S., Aoshima K., et al. MassBank: a public repository for sharing mass spectral data for life sciences. J Mass Spectrom 2010, 45:703-714.
-
(2010)
J Mass Spectrom
, vol.45
, pp. 703-714
-
-
Horai, H.1
Arita, M.2
Kanaya, S.3
Nihei, Y.4
Ikeda, T.5
Suwa, K.6
Ojima, Y.7
Tanaka, K.8
Tanaka, S.9
Aoshima, K.10
-
6
-
-
84865247010
-
RIKEN tandem mass spectral database (ReSpect) for phytochemicals: a plant-specific MS/MS-based data resource and database
-
Sawada Y., Nakabayashi R., Yamada Y., Suzuki M., Sato M., Sakata A., Akiyama K., Sakurai T., Matsuda F., Aoki T., et al. RIKEN tandem mass spectral database (ReSpect) for phytochemicals: a plant-specific MS/MS-based data resource and database. Phytochemistry 2012, 82:38-45.
-
(2012)
Phytochemistry
, vol.82
, pp. 38-45
-
-
Sawada, Y.1
Nakabayashi, R.2
Yamada, Y.3
Suzuki, M.4
Sato, M.5
Sakata, A.6
Akiyama, K.7
Sakurai, T.8
Matsuda, F.9
Aoki, T.10
-
7
-
-
84856209481
-
PMDB: Plant Metabolome Database-a metabolomic approach
-
Udayakumar M., Prem Chandar D., Arun N., Mathangi J., Hemavathi K., Seenivasagam R. PMDB: Plant Metabolome Database-a metabolomic approach. Med Chem Res 2012, 21:47-52.
-
(2012)
Med Chem Res
, vol.21
, pp. 47-52
-
-
Udayakumar, M.1
Prem Chandar, D.2
Arun, N.3
Mathangi, J.4
Hemavathi, K.5
Seenivasagam, R.6
-
8
-
-
77952302069
-
In silico fragmentation for computer assisted identification of metabolite mass spectra
-
Wolf S., Schmidt S., Muller-Hannemann M., Neumann S. In silico fragmentation for computer assisted identification of metabolite mass spectra. BMC Bioinformatics 2010, 11:148.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 148
-
-
Wolf, S.1
Schmidt, S.2
Muller-Hannemann, M.3
Neumann, S.4
-
9
-
-
77749330381
-
Statistical indices for simultaneous large-scale metabolite detections for a single NMR spectrum
-
Chikayama E., Sekiyama Y., Okamoto M., Nakanishi Y., Tsuboi Y., Akiyama K., Saito K., Shinozaki K., Kikuchi J. Statistical indices for simultaneous large-scale metabolite detections for a single NMR spectrum. Anal Chem 2010, 82:1653-1658.
-
(2010)
Anal Chem
, vol.82
, pp. 1653-1658
-
-
Chikayama, E.1
Sekiyama, Y.2
Okamoto, M.3
Nakanishi, Y.4
Tsuboi, Y.5
Akiyama, K.6
Saito, K.7
Shinozaki, K.8
Kikuchi, J.9
-
10
-
-
80054061389
-
Elemental formula annotation of polar and lipophilic metabolites using 13C, 15N and 34S isotope labelling, in combination with high-resolution mass spectrometry
-
Giavalisco P., Li Y., Matthes A., Eckhardt A., Hubberten H.-M., Hesse H., Segu S., Hummel J., Köhl K., Willmitzer L. Elemental formula annotation of polar and lipophilic metabolites using 13C, 15N and 34S isotope labelling, in combination with high-resolution mass spectrometry. Plant J 2011, 68:364-376.
-
(2011)
Plant J
, vol.68
, pp. 364-376
-
-
Giavalisco, P.1
Li, Y.2
Matthes, A.3
Eckhardt, A.4
Hubberten, H.-M.5
Hesse, H.6
Segu, S.7
Hummel, J.8
Köhl, K.9
Willmitzer, L.10
-
11
-
-
84873359659
-
Combination of liquid chromatography-Fourier transform-ion cyclotron resonance-mass spectrometry with 13C-labeling for chemical assignment of S-containing metabolites in onion bulbs
-
Nakabayashi R., Sawada Y., Yamada Y., Suzuki M., Hirai M.Y., Sakurai T., Saito K. Combination of liquid chromatography-Fourier transform-ion cyclotron resonance-mass spectrometry with 13C-labeling for chemical assignment of S-containing metabolites in onion bulbs. Anal Chem 2013, 85:1310-1315.
-
(2013)
Anal Chem
, vol.85
, pp. 1310-1315
-
-
Nakabayashi, R.1
Sawada, Y.2
Yamada, Y.3
Suzuki, M.4
Hirai, M.Y.5
Sakurai, T.6
Saito, K.7
-
12
-
-
58449134032
-
Widely targeted metabolomics based on large-scale MS/MS data for elucidating metabolite accumulation patterns in plants
-
Sawada Y., Akiyama K., Sakata A., Kuwahara A., Otsuki H., Sakurai T., Saito K., Hirai M.Y. Widely targeted metabolomics based on large-scale MS/MS data for elucidating metabolite accumulation patterns in plants. Plant Cell Physiol 2009, 50:37-47.
-
(2009)
Plant Cell Physiol
, vol.50
, pp. 37-47
-
-
Sawada, Y.1
Akiyama, K.2
Sakata, A.3
Kuwahara, A.4
Otsuki, H.5
Sakurai, T.6
Saito, K.7
Hirai, M.Y.8
-
13
-
-
40749148526
-
Physiological roles of the β-substituted alanine synthase gene family in Arabidopsis
-
Watanabe M., Kusano M., Oikawa A., Fukushima A., Noji M., Saito K. Physiological roles of the β-substituted alanine synthase gene family in Arabidopsis. Plant Physiol 2008, 146:310-320.
-
(2008)
Plant Physiol
, vol.146
, pp. 310-320
-
-
Watanabe, M.1
Kusano, M.2
Oikawa, A.3
Fukushima, A.4
Noji, M.5
Saito, K.6
-
14
-
-
77951602363
-
Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis
-
Redestig H., Kusano M., Fukushima A., Matsuda F., Saito K., Arita M. Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis. BMC Bioinformatics 2010, 11:214.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 214
-
-
Redestig, H.1
Kusano, M.2
Fukushima, A.3
Matsuda, F.4
Saito, K.5
Arita, M.6
-
15
-
-
79951899297
-
Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment
-
Kusano M., Redestig H., Hirai T., Oikawa A., Matsuda F., Fukushima A., Arita M., Watanabe S., Yano M., Hiwasa-Tanase K., et al. Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment. PLoS One 2011, 6:e16989.
-
(2011)
PLoS One
, vol.6
-
-
Kusano, M.1
Redestig, H.2
Hirai, T.3
Oikawa, A.4
Matsuda, F.5
Fukushima, A.6
Arita, M.7
Watanabe, S.8
Yano, M.9
Hiwasa-Tanase, K.10
-
16
-
-
84859151472
-
Metabolite analyses of single cells
-
Oikawa A., Saito K. Metabolite analyses of single cells. Plant J 2012, 70:30-38.
-
(2012)
Plant J
, vol.70
, pp. 30-38
-
-
Oikawa, A.1
Saito, K.2
-
17
-
-
80455173508
-
Toward the storage metabolome: profiling the barley vacuole
-
Tohge T., Ramos M.S., Nunes-Nesi A., Mutwil M., Giavalisco P., Steinhauser D., Schellenberg M., Willmitzer L., Persson S., Martinoia E., et al. Toward the storage metabolome: profiling the barley vacuole. Plant Physiol 2011, 157:1469-1482.
-
(2011)
Plant Physiol
, vol.157
, pp. 1469-1482
-
-
Tohge, T.1
Ramos, M.S.2
Nunes-Nesi, A.3
Mutwil, M.4
Giavalisco, P.5
Steinhauser, D.6
Schellenberg, M.7
Willmitzer, L.8
Persson, S.9
Martinoia, E.10
-
18
-
-
80053584823
-
Metabolomics of a single vacuole reveals metabolic dynamism in an alga Chara australis
-
Oikawa A., Matsuda F., Kikuyama M., Mimura T., Saito K. Metabolomics of a single vacuole reveals metabolic dynamism in an alga Chara australis. Plant Physiol 2011, 157:544-551.
-
(2011)
Plant Physiol
, vol.157
, pp. 544-551
-
-
Oikawa, A.1
Matsuda, F.2
Kikuyama, M.3
Mimura, T.4
Saito, K.5
-
19
-
-
84863115738
-
Mass spectrometric imaging as a high-spatial resolution tool for functional genomics: tissue-specific gene expression of TT7 inferred from heterogeneous distribution of metabolites in Arabidopsis flowers
-
Korte A.R., Song Z., Nikolau B.J., Lee Y.J. Mass spectrometric imaging as a high-spatial resolution tool for functional genomics: tissue-specific gene expression of TT7 inferred from heterogeneous distribution of metabolites in Arabidopsis flowers. Anal Method 2012, 4:474-481.
-
(2012)
Anal Method
, vol.4
, pp. 474-481
-
-
Korte, A.R.1
Song, Z.2
Nikolau, B.J.3
Lee, Y.J.4
-
20
-
-
4444309760
-
Potential of metabolomics as a functional genomics tool
-
Bino R.J., Hall R.D., Fiehn O., Kopka J., Saito K., Draper J., Nikolau B.J., Mendes P., Roessner-Tunali U., Beale M.H., et al. Potential of metabolomics as a functional genomics tool. Trends Plant Sci 2004, 9:418-425.
-
(2004)
Trends Plant Sci
, vol.9
, pp. 418-425
-
-
Bino, R.J.1
Hall, R.D.2
Fiehn, O.3
Kopka, J.4
Saito, K.5
Draper, J.6
Nikolau, B.J.7
Mendes, P.8
Roessner-Tunali, U.9
Beale, M.H.10
-
21
-
-
75949126260
-
AtMetExpress development: a phytochemical atlas of Arabidopsis development
-
Matsuda F., Hirai M.Y., Sasaki E., Akiyama K., Yonekura-Sakakibara K., Provart N.J., Sakurai T., Shimada Y., Saito K. AtMetExpress development: a phytochemical atlas of Arabidopsis development. Plant Physiol 2010, 152:566-578.
-
(2010)
Plant Physiol
, vol.152
, pp. 566-578
-
-
Matsuda, F.1
Hirai, M.Y.2
Sasaki, E.3
Akiyama, K.4
Yonekura-Sakakibara, K.5
Provart, N.J.6
Sakurai, T.7
Shimada, Y.8
Saito, K.9
-
22
-
-
84862214842
-
Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics-database and tools update
-
Bais P., Moon-Quanbeck S.M., Nikolau B.J., Dickerson J.A. Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics-database and tools update. Nucleic Acids Res 2012, 40:D1216-D1220.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Bais, P.1
Moon-Quanbeck, S.M.2
Nikolau, B.J.3
Dickerson, J.A.4
-
23
-
-
84874984318
-
Metabolomics as a hypothesis-generating functional genomics tool for the annotation of Arabidopsis thaliana genes of "unknown function"
-
Quanbeck S.M.M., Brachova L., Campbell A.A., Guan X., Perera A., He K., Rhee S.Y., Bais P., Dickerson J., Dixon P., et al. Metabolomics as a hypothesis-generating functional genomics tool for the annotation of Arabidopsis thaliana genes of "unknown function". Front Plant Sci 2012, 3:15.
-
(2012)
Front Plant Sci
, vol.3
, pp. 15
-
-
Quanbeck, S.M.M.1
Brachova, L.2
Campbell, A.A.3
Guan, X.4
Perera, A.5
He, K.6
Rhee, S.Y.7
Bais, P.8
Dickerson, J.9
Dixon, P.10
-
24
-
-
58849117570
-
MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites
-
Matsuda F., Yonekura-Sakakibara K., Niida R., Kuromori T., Shinozaki K., Saito K. MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites. Plant J 2009, 57:555-577.
-
(2009)
Plant J
, vol.57
, pp. 555-577
-
-
Matsuda, F.1
Yonekura-Sakakibara, K.2
Niida, R.3
Kuromori, T.4
Shinozaki, K.5
Saito, K.6
-
25
-
-
84861331816
-
Mass spectra-based framework for automated structural elucidation of metabolome data to explore phytochemical diversity
-
Matsuda F., Nakabayashi R., Sawada Y., Suzuki M., Hirai M.Y., Kanaya S., Saito K. Mass spectra-based framework for automated structural elucidation of metabolome data to explore phytochemical diversity. Front Plant Sci 2011, 2:40.
-
(2011)
Front Plant Sci
, vol.2
, pp. 40
-
-
Matsuda, F.1
Nakabayashi, R.2
Sawada, Y.3
Suzuki, M.4
Hirai, M.Y.5
Kanaya, S.6
Saito, K.7
-
26
-
-
47749083127
-
The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access
-
Goda H., Sasaki E., Akiyama K., Maruyama-Nakashita A., Nakabayashi K., Li W., Ogawa M., Yamauchi Y., Preston J., et al. The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access. Plant J 2008, 55:526-542.
-
(2008)
Plant J
, vol.55
, pp. 526-542
-
-
Goda, H.1
Sasaki, E.2
Akiyama, K.3
Maruyama-Nakashita, A.4
Nakabayashi, K.5
Li, W.6
Ogawa, M.7
Yamauchi, Y.8
Preston, J.9
-
27
-
-
84874251578
-
PRIMe update: innovative content for plant metabolomics and integration of gene expression and metabolite accumulation
-
Sakurai T., Yamada Y., Sawada Y., Matsuda F., Akiyama K., Shinozaki K., Hirai M.Y., Saito K. PRIMe update: innovative content for plant metabolomics and integration of gene expression and metabolite accumulation. Plant Cell Physiol 2013, 54:e5.
-
(2013)
Plant Cell Physiol
, vol.54
-
-
Sakurai, T.1
Yamada, Y.2
Sawada, Y.3
Matsuda, F.4
Akiyama, K.5
Shinozaki, K.6
Hirai, M.Y.7
Saito, K.8
-
28
-
-
84886601440
-
The flavonoid biosynthetic pathway in Arabidopsis: structural and genetic diversity
-
Saito K., Yonekura-Sakakibara K., Nakabayashi R., Higashi Y., Yamazaki M., Tohge T., Fernie A.R. The flavonoid biosynthetic pathway in Arabidopsis: structural and genetic diversity. Plant Physiol Biochem 2013, 10.1016/j.plaphy.2013.02.001.
-
(2013)
Plant Physiol Biochem
-
-
Saito, K.1
Yonekura-Sakakibara, K.2
Nakabayashi, R.3
Higashi, Y.4
Yamazaki, M.5
Tohge, T.6
Fernie, A.R.7
-
29
-
-
57749089675
-
Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis
-
Yonekura-Sakakibara K., Tohge T., Matsuda F., Nakabayashi R., Takayama H., Niida R., Watanabe-Takahashi A., Inoue E., Saito K. Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis. Plant Cell 2008, 20:2160-2176.
-
(2008)
Plant Cell
, vol.20
, pp. 2160-2176
-
-
Yonekura-Sakakibara, K.1
Tohge, T.2
Matsuda, F.3
Nakabayashi, R.4
Takayama, H.5
Niida, R.6
Watanabe-Takahashi, A.7
Inoue, E.8
Saito, K.9
-
30
-
-
84355166610
-
Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana
-
Yonekura-Sakakibara K., Fukushima A., Nakabayashi R., Hanada K., Matsuda F., Sugawara S., Inoue E., Kuromori T., Ito T., et al. Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana. Plant J 2012, 69:154-167.
-
(2012)
Plant J
, vol.69
, pp. 154-167
-
-
Yonekura-Sakakibara, K.1
Fukushima, A.2
Nakabayashi, R.3
Hanada, K.4
Matsuda, F.5
Sugawara, S.6
Inoue, E.7
Kuromori, T.8
Ito, T.9
-
31
-
-
84875068820
-
Acyl-glucose-dependent glucosyltransferase catalyzes the final step of anthocyanin formation in Arabidopsis
-
Miyahara T., Sakiyama R., Ozeki Y., Sasaki N. Acyl-glucose-dependent glucosyltransferase catalyzes the final step of anthocyanin formation in Arabidopsis. J Plant Physiol 2013, 10.1016/j.jplph.2012.12.001.
-
(2013)
J Plant Physiol
-
-
Miyahara, T.1
Sakiyama, R.2
Ozeki, Y.3
Sasaki, N.4
-
32
-
-
77952194205
-
Metabolic profiling and cytological analysis of proanthocyanidins in immature seeds of Arabidopsis thaliana flavonoid accumulation mutants
-
Kitamura S., Matsuda F., Tohge T., Yonekura-Sakakibara K., Yamazaki M., Saito K., Narumi I. Metabolic profiling and cytological analysis of proanthocyanidins in immature seeds of Arabidopsis thaliana flavonoid accumulation mutants. Plant J 2010, 62:549-559.
-
(2010)
Plant J
, vol.62
, pp. 549-559
-
-
Kitamura, S.1
Matsuda, F.2
Tohge, T.3
Yonekura-Sakakibara, K.4
Yamazaki, M.5
Saito, K.6
Narumi, I.7
-
33
-
-
78149380797
-
Analysis of production of flavonol glycosides-dependent flavonol glycoside accumulation in Arabidopsis thaliana plants reveals MYB11-MYB12- and MYB111-independent flavonol glycoside accumulation
-
Stracke R., Jahns O., Keck M., Tohge T., Niehaus K., Fernie A.R., Weisshaar B. Analysis of production of flavonol glycosides-dependent flavonol glycoside accumulation in Arabidopsis thaliana plants reveals MYB11-MYB12- and MYB111-independent flavonol glycoside accumulation. New Phytol 2010, 188:985-1000.
-
(2010)
New Phytol
, vol.188
, pp. 985-1000
-
-
Stracke, R.1
Jahns, O.2
Keck, M.3
Tohge, T.4
Niehaus, K.5
Fernie, A.R.6
Weisshaar, B.7
-
34
-
-
77957341467
-
MYB transcription factors in Arabidopsis
-
Dubos C., Stracke R., Grotewold E., Weisshaar B., Martin C., Lepiniec L. MYB transcription factors in Arabidopsis. Trends Plant Sci 2010, 15:573-581.
-
(2010)
Trends Plant Sci
, vol.15
, pp. 573-581
-
-
Dubos, C.1
Stracke, R.2
Grotewold, E.3
Weisshaar, B.4
Martin, C.5
Lepiniec, L.6
-
36
-
-
79952304238
-
From amino acid to glucosinolate biosynthesis: protein sequence changes in the evolution of methylthioalkylmalate synthase in Arabidopsis
-
de Kraker J.-W., Gershenzon J. From amino acid to glucosinolate biosynthesis: protein sequence changes in the evolution of methylthioalkylmalate synthase in Arabidopsis. Plant Cell 2011, 23:38-53.
-
(2011)
Plant Cell
, vol.23
, pp. 38-53
-
-
de Kraker, J.-W.1
Gershenzon, J.2
-
37
-
-
70349899130
-
Arabidopsis bile acid:sodium symporter family protein 5 is involved in methionine-derived glucosinolate biosynthesis
-
Sawada Y., Toyooka K., Kuwahara A., Sakata A., Nagano M., Saito K., Hirai M.Y. Arabidopsis bile acid:sodium symporter family protein 5 is involved in methionine-derived glucosinolate biosynthesis. Plant Cell Physiol 2009, 50:1579-1586.
-
(2009)
Plant Cell Physiol
, vol.50
, pp. 1579-1586
-
-
Sawada, Y.1
Toyooka, K.2
Kuwahara, A.3
Sakata, A.4
Nagano, M.5
Saito, K.6
Hirai, M.Y.7
-
38
-
-
34547526914
-
Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis
-
Hirai M.Y., Sugiyama K., Sawada Y., Tohge T., Obayashi T., Suzuki A., Araki R., Sakurai N., Suzuki H., Aoki K., et al. Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis. Proc Natl Acad Sci U S A 2007, 104:6478-6483.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 6478-6483
-
-
Hirai, M.Y.1
Sugiyama, K.2
Sawada, Y.3
Tohge, T.4
Obayashi, T.5
Suzuki, A.6
Araki, R.7
Sakurai, N.8
Suzuki, H.9
Aoki, K.10
-
39
-
-
33845765675
-
Arabidopsis SLIM1 is a central transcriptional regulator of plant sulfur response and metabolism
-
Maruyama-Nakashita A., Nakamura Y., Tohge T., Saito K., Takahashi H. Arabidopsis SLIM1 is a central transcriptional regulator of plant sulfur response and metabolism. Plant Cell 2006, 18:3235-3251.
-
(2006)
Plant Cell
, vol.18
, pp. 3235-3251
-
-
Maruyama-Nakashita, A.1
Nakamura, Y.2
Tohge, T.3
Saito, K.4
Takahashi, H.5
-
40
-
-
66449134839
-
Disruption of adenosine-5-phosphosulfate kinase in Arabidopsis reduces levels of sulfated secondary metabolites
-
Mugford S.G., Yoshimoto N., Reichelt M., Wirtz M., Hill L., Mugford S.T., Nakazato Y., Noji M., Takahashi H., et al. Disruption of adenosine-5-phosphosulfate kinase in Arabidopsis reduces levels of sulfated secondary metabolites. Plant Cell 2009, 21:910-927.
-
(2009)
Plant Cell
, vol.21
, pp. 910-927
-
-
Mugford, S.G.1
Yoshimoto, N.2
Reichelt, M.3
Wirtz, M.4
Hill, L.5
Mugford, S.T.6
Nakazato, Y.7
Noji, M.8
Takahashi, H.9
-
41
-
-
79960850408
-
Cytosolic γ-glutamyl peptidases process glutathione conjugates in the biosynthesis of glucosinolates and camalexin in Arabidopsis
-
Geu-Flores F., Møldrup M.E., Böttcher C., Olsen C.E., Scheel D., Halkier B.A. Cytosolic γ-glutamyl peptidases process glutathione conjugates in the biosynthesis of glucosinolates and camalexin in Arabidopsis. Plant Cell 2011, 23:2456-2469.
-
(2011)
Plant Cell
, vol.23
, pp. 2456-2469
-
-
Geu-Flores, F.1
Møldrup, M.E.2
Böttcher, C.3
Olsen, C.E.4
Scheel, D.5
Halkier, B.A.6
-
42
-
-
80052338881
-
Combining genome-wide association mapping and transcriptional networks to identify novel genes controlling glucosinolates in Arabidopsis thaliana
-
Chan E.K.F., Rowe H.C., Corwin J.A., Joseph B., Kliebenstein D.J. Combining genome-wide association mapping and transcriptional networks to identify novel genes controlling glucosinolates in Arabidopsis thaliana. PLoS Biol 2011, 9:e1001125.
-
(2011)
PLoS Biol
, vol.9
-
-
Chan, E.K.F.1
Rowe, H.C.2
Corwin, J.A.3
Joseph, B.4
Kliebenstein, D.J.5
-
43
-
-
84865206069
-
NRT/PTR transporters are essential for translocation of glucosinolate defence compounds to seeds
-
Nour-Eldin H.H., Andersen T.G., Burow M., Madsen S.R., Jorgensen M.E., Olsen C.E., Dreyer I., Hedrich R., Geiger D., Halkier B.A. NRT/PTR transporters are essential for translocation of glucosinolate defence compounds to seeds. Nature 2012, 488:531-534.
-
(2012)
Nature
, vol.488
, pp. 531-534
-
-
Nour-Eldin, H.H.1
Andersen, T.G.2
Burow, M.3
Madsen, S.R.4
Jorgensen, M.E.5
Olsen, C.E.6
Dreyer, I.7
Hedrich, R.8
Geiger, D.9
Halkier, B.A.10
-
44
-
-
79551712199
-
Metabolomic approaches toward understanding nitrogen metabolism in plants
-
Kusano M., Fukushima A., Redestig H., Saito K. Metabolomic approaches toward understanding nitrogen metabolism in plants. J Exp Bot 2011, 62:1439-1453.
-
(2011)
J Exp Bot
, vol.62
, pp. 1439-1453
-
-
Kusano, M.1
Fukushima, A.2
Redestig, H.3
Saito, K.4
-
45
-
-
79960574427
-
Metabolomic analysis of Arabidopsis reveals hemiterpenoid glycosides as products of a nitrate ion-regulated, carbon flux overflow
-
Ward J.L., Baker J.M., Llewellyn A.M., Hawkins N.D., Beale M.H. Metabolomic analysis of Arabidopsis reveals hemiterpenoid glycosides as products of a nitrate ion-regulated, carbon flux overflow. Proc Natl Acad Sci U S A 2011, 108:10762-10767.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 10762-10767
-
-
Ward, J.L.1
Baker, J.M.2
Llewellyn, A.M.3
Hawkins, N.D.4
Beale, M.H.5
-
46
-
-
84874606424
-
A new class of plant lipid is essential for protection against phosphorus depletion
-
Okazaki Y., Otsuki H., Narisawa T., Kobayashi M., Sawai S., Kamide Y., Kusano M., Aoki T., Hirai M.Y., Saito K. A new class of plant lipid is essential for protection against phosphorus depletion. Nat Commun 2013, 4:1510.
-
(2013)
Nat Commun
, vol.4
, pp. 1510
-
-
Okazaki, Y.1
Otsuki, H.2
Narisawa, T.3
Kobayashi, M.4
Sawai, S.5
Kamide, Y.6
Kusano, M.7
Aoki, T.8
Hirai, M.Y.9
Saito, K.10
-
47
-
-
66449114329
-
A chloroplastic UDP-glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis
-
Okazaki Y., Shimojima M., Sawada Y., Toyooka K., Narisawa T., Mochida K., Tanaka H., Matsuda F., Hirai A., Hirai M.Y., et al. A chloroplastic UDP-glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis. Plant Cell 2009, 21:892-909.
-
(2009)
Plant Cell
, vol.21
, pp. 892-909
-
-
Okazaki, Y.1
Shimojima, M.2
Sawada, Y.3
Toyooka, K.4
Narisawa, T.5
Mochida, K.6
Tanaka, H.7
Matsuda, F.8
Hirai, A.9
Hirai, M.Y.10
-
48
-
-
68249162469
-
Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A
-
Maruyama K., Takeda M., Kidokoro S., Yamada K., Sakuma Y., Urano K., Fujita M., Yoshiwara K., Matsukura S., et al. Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A. Plant Physiol 2009, 150:1972-1980.
-
(2009)
Plant Physiol
, vol.150
, pp. 1972-1980
-
-
Maruyama, K.1
Takeda, M.2
Kidokoro, S.3
Yamada, K.4
Sakuma, Y.5
Urano, K.6
Fujita, M.7
Yoshiwara, K.8
Matsukura, S.9
-
49
-
-
79960214215
-
Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of Arabidopsis to UV-B light
-
Kusano M., Tohge T., Fukushima A., Kobayashi M., Hayashi N., Otsuki H., Kondou Y., Goto H., Kawashima M., et al. Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of Arabidopsis to UV-B light. Plant J 2011, 67:354-369.
-
(2011)
Plant J
, vol.67
, pp. 354-369
-
-
Kusano, M.1
Tohge, T.2
Fukushima, A.3
Kobayashi, M.4
Hayashi, N.5
Otsuki, H.6
Kondou, Y.7
Goto, H.8
Kawashima, M.9
-
50
-
-
59149100506
-
System-wide molecular evidence for phenotypic buffering in Arabidopsis
-
Fu J., Keurentjes J.J., Bouwmeester H., America T., Verstappen F.W., Ward J.L., Beale M.H., de Vos R.C., Dijkstra M., Scheltema R.A., et al. System-wide molecular evidence for phenotypic buffering in Arabidopsis. Nat Genet 2009, 41:166-167.
-
(2009)
Nat Genet
, vol.41
, pp. 166-167
-
-
Fu, J.1
Keurentjes, J.J.2
Bouwmeester, H.3
America, T.4
Verstappen, F.W.5
Ward, J.L.6
Beale, M.H.7
de Vos, R.C.8
Dijkstra, M.9
Scheltema, R.A.10
-
51
-
-
84863669380
-
Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis
-
Routaboul J.M., Dubos C., Beck G., Marquis C., Bidzinski P., Loudet O., Lepiniec L. Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis. J Exp Bot 2012, 63:3749-3764.
-
(2012)
J Exp Bot
, vol.63
, pp. 3749-3764
-
-
Routaboul, J.M.1
Dubos, C.2
Beck, G.3
Marquis, C.4
Bidzinski, P.5
Loudet, O.6
Lepiniec, L.7
-
52
-
-
84864594234
-
Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids
-
Meyer R.C., Witucka-Wall H., Becher M., Blacha A., Boudichevskaia A., Dörmann P., Fiehn O., Friedel S., von Korff M., Lisec J., et al. Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. Plant J 2012, 71:669-683.
-
(2012)
Plant J
, vol.71
, pp. 669-683
-
-
Meyer, R.C.1
Witucka-Wall, H.2
Becher, M.3
Blacha, A.4
Boudichevskaia, A.5
Dörmann, P.6
Fiehn, O.7
Friedel, S.8
von Korff, M.9
Lisec, J.10
-
53
-
-
77957766623
-
Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions
-
Sulpice R., Trenkamp S., Steinfath M., Usadel B., Gibon Y., Witucka-Wall H., Pyl E.-T., Tschoep H., Steinhauser M.C., Guenther M., et al. Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions. Plant Cell 2010, 22:2872-2893.
-
(2010)
Plant Cell
, vol.22
, pp. 2872-2893
-
-
Sulpice, R.1
Trenkamp, S.2
Steinfath, M.3
Usadel, B.4
Gibon, Y.5
Witucka-Wall, H.6
Pyl, E.-T.7
Tschoep, H.8
Steinhauser, M.C.9
Guenther, M.10
-
54
-
-
84871699802
-
Genetic analysis of metabolome-phenotype interactions: from model to crop species
-
Carreno-Quintero N., Bouwmeester H.J., Keurentjes J.J.B. Genetic analysis of metabolome-phenotype interactions: from model to crop species. Trends Genet 2013, 29:41-50.
-
(2013)
Trends Genet
, vol.29
, pp. 41-50
-
-
Carreno-Quintero, N.1
Bouwmeester, H.J.2
Keurentjes, J.J.B.3
-
55
-
-
76549103233
-
Metabolomic screening applied to rice FOX Arabidopsis lines leads to the identification of a gene-changing nitrogen metabolism
-
Albinsky D., Kusano M., Higuchi M., Hayashi N., Kobayashi M., Fukushima A., Mori M., Ichikawa T., Matsui K., et al. Metabolomic screening applied to rice FOX Arabidopsis lines leads to the identification of a gene-changing nitrogen metabolism. Mol Plant 2010, 3:125-142.
-
(2010)
Mol Plant
, vol.3
, pp. 125-142
-
-
Albinsky, D.1
Kusano, M.2
Higuchi, M.3
Hayashi, N.4
Kobayashi, M.5
Fukushima, A.6
Mori, M.7
Ichikawa, T.8
Matsui, K.9
-
56
-
-
79955467281
-
Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice
-
Kusano M., Tabuchi M., Fukushima A., Funayama K., Diaz C., Kobayashi M., Hayashi N., Tsuchiya Y.N., Takahashi H., et al. Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice. Plant J 2011, 66:456-466.
-
(2011)
Plant J
, vol.66
, pp. 456-466
-
-
Kusano, M.1
Tabuchi, M.2
Fukushima, A.3
Funayama, K.4
Diaz, C.5
Kobayashi, M.6
Hayashi, N.7
Tsuchiya, Y.N.8
Takahashi, H.9
-
57
-
-
84861337100
-
Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis
-
Matsuda F., Okazaki Y., Oikawa A., Kusano M., Nakabayashi R., Kikuchi J., Yonemaru J.-I., Ebana K., Yano M., et al. Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis. Plant J 2012, 70:624-636.
-
(2012)
Plant J
, vol.70
, pp. 624-636
-
-
Matsuda, F.1
Okazaki, Y.2
Oikawa, A.3
Kusano, M.4
Nakabayashi, R.5
Kikuchi, J.6
Yonemaru, J.-I.7
Ebana, K.8
Yano, M.9
-
58
-
-
80054984956
-
Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics
-
Redestig H., Kusano M., Ebana K., Kobayashi M., Oikawa A., Okazaki Y., Matsuda F., Arita M., Fujita N., et al. Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics. BMC Syst Biol 2011, 5:176.
-
(2011)
BMC Syst Biol
, vol.5
, pp. 176
-
-
Redestig, H.1
Kusano, M.2
Ebana, K.3
Kobayashi, M.4
Oikawa, A.5
Okazaki, Y.6
Matsuda, F.7
Arita, M.8
Fujita, N.9
-
59
-
-
84867193154
-
A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties
-
Calingacion M.N., Boualaphanh C., Daygon V.D., Anacleto R., Sackville Hamilton R., Biais B., Deborde C., Maucourt M., Moing A., Mumm R., et al. A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties. Metabolomics 2012, 8:771-783.
-
(2012)
Metabolomics
, vol.8
, pp. 771-783
-
-
Calingacion, M.N.1
Boualaphanh, C.2
Daygon, V.D.3
Anacleto, R.4
Sackville Hamilton, R.5
Biais, B.6
Deborde, C.7
Maucourt, M.8
Moing, A.9
Mumm, R.10
-
60
-
-
84859145489
-
Drought responses of leaf tissues from wheat cultivars of differing drought tolerance at the metabolite level
-
Bowne J.B., Erwin T.A., Juttner J., Schnurbusch T., Langridge P., Bacic A., Roessner U. Drought responses of leaf tissues from wheat cultivars of differing drought tolerance at the metabolite level. Mol Plant 2012, 5:418-429.
-
(2012)
Mol Plant
, vol.5
, pp. 418-429
-
-
Bowne, J.B.1
Erwin, T.A.2
Juttner, J.3
Schnurbusch, T.4
Langridge, P.5
Bacic, A.6
Roessner, U.7
-
61
-
-
84865713444
-
The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize
-
Amiour N., Imbaud S., Clément G., Agier N., Zivy M., Valot B., Balliau T., Armengaud P., Quilleré I., Cañas R., et al. The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize. J Exp Bot 2012, 63:5017-5033.
-
(2012)
J Exp Bot
, vol.63
, pp. 5017-5033
-
-
Amiour, N.1
Imbaud, S.2
Clément, G.3
Agier, N.4
Zivy, M.5
Valot, B.6
Balliau, T.7
Armengaud, P.8
Quilleré, I.9
Cañas, R.10
-
62
-
-
79959207993
-
Transcriptomic, proteomic and metabolomic analysis of UV-B signaling in maize
-
Casati P., Campi M., Morrow D., Fernandes J., Walbot V. Transcriptomic, proteomic and metabolomic analysis of UV-B signaling in maize. BMC Genomics 2011, 12:321.
-
(2011)
BMC Genomics
, vol.12
, pp. 321
-
-
Casati, P.1
Campi, M.2
Morrow, D.3
Fernandes, J.4
Walbot, V.5
-
63
-
-
84948967266
-
Metabolomics of a model fruit: tomato
-
Blackwell
-
de Vos R.C.H., Hall R.D., Moing A. Metabolomics of a model fruit: tomato. Annual Plant Reviews, Biology of Plant Metabolomics 2011, vol. 43:109-155. Blackwell.
-
(2011)
Annual Plant Reviews, Biology of Plant Metabolomics
, vol.43
, pp. 109-155
-
-
de Vos, R.C.H.1
Hall, R.D.2
Moing, A.3
-
64
-
-
67649795059
-
Monoterpenes in the glandular trichomes of tomato are synthesized from a neryl diphosphate precursor rather than geranyl diphosphate
-
Schilmiller A.L., Schauvinhold I., Larson M., Xu R., Charbonneau A.L., Schmidt A., Wilkerson C., Last R.L., Pichersky E. Monoterpenes in the glandular trichomes of tomato are synthesized from a neryl diphosphate precursor rather than geranyl diphosphate. Proc Natl Acad Sci U S A 2009, 106:10865-10870.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 10865-10870
-
-
Schilmiller, A.L.1
Schauvinhold, I.2
Larson, M.3
Xu, R.4
Charbonneau, A.L.5
Schmidt, A.6
Wilkerson, C.7
Last, R.L.8
Pichersky, E.9
-
65
-
-
84867047345
-
Identification of a BAHD acetyltransferase that produces protective acyl sugars in tomato trichomes
-
Schilmiller A.L., Charbonneau A.L., Last R.L. Identification of a BAHD acetyltransferase that produces protective acyl sugars in tomato trichomes. Proc Natl Acad Sci U S A 2012, 109:16377-16382.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 16377-16382
-
-
Schilmiller, A.L.1
Charbonneau, A.L.2
Last, R.L.3
-
66
-
-
84863085006
-
The Sg-1 glycosyltransferase locus regulates structural diversity of triterpenoid saponins of soybean
-
Sayama T., Ono E., Takagi K., Takada Y., Horikawa M., Nakamoto Y., Hirose A., Sasama H., Ohashi M., Hasegawa H., et al. The Sg-1 glycosyltransferase locus regulates structural diversity of triterpenoid saponins of soybean. Plant Cell 2012, 24:2123-2138.
-
(2012)
Plant Cell
, vol.24
, pp. 2123-2138
-
-
Sayama, T.1
Ono, E.2
Takagi, K.3
Takada, Y.4
Horikawa, M.5
Nakamoto, Y.6
Hirose, A.7
Sasama, H.8
Ohashi, M.9
Hasegawa, H.10
-
67
-
-
77953200019
-
Genomic and coexpression analyses predict multiple genes involved in triterpene saponin biosynthesis in Medicago truncatula
-
Naoumkina M.A., Modolo L.V., Huhman D.V., Urbanczyk-Wochniak E., Tang Y., Sumner L.W., Dixon R.A. Genomic and coexpression analyses predict multiple genes involved in triterpene saponin biosynthesis in Medicago truncatula. Plant Cell 2010, 22:850-866.
-
(2010)
Plant Cell
, vol.22
, pp. 850-866
-
-
Naoumkina, M.A.1
Modolo, L.V.2
Huhman, D.V.3
Urbanczyk-Wochniak, E.4
Tang, Y.5
Sumner, L.W.6
Dixon, R.A.7
-
68
-
-
79957688418
-
MATE2 mediates vacuolar sequestration of flavonoid glycosides and glycoside malonates in Medicago truncatula
-
Zhao J., Huhman D., Shadle G., He X.-Z., Sumner L.W., Tang Y., Dixon R.A. MATE2 mediates vacuolar sequestration of flavonoid glycosides and glycoside malonates in Medicago truncatula. Plant Cell 2011, 23:1536-1555.
-
(2011)
Plant Cell
, vol.23
, pp. 1536-1555
-
-
Zhao, J.1
Huhman, D.2
Shadle, G.3
He, X.-Z.4
Sumner, L.W.5
Tang, Y.6
Dixon, R.A.7
-
69
-
-
84870792724
-
UDP-glycosyltransferases from the UGT73C subfamily in Barbarea vulgaris catalyze sapogenin 3-O-glucosylation in saponin-mediated insect resistance
-
Augustin J.M., Drok S., Shinoda T., Sanmiya K., Nielsen J.K., Khakimov B., Olsen C.E., Hansen E.H., Kuzina V., Ekstrøm C.T., et al. UDP-glycosyltransferases from the UGT73C subfamily in Barbarea vulgaris catalyze sapogenin 3-O-glucosylation in saponin-mediated insect resistance. Plant Physiol 2012, 160:1881-1895.
-
(2012)
Plant Physiol
, vol.160
, pp. 1881-1895
-
-
Augustin, J.M.1
Drok, S.2
Shinoda, T.3
Sanmiya, K.4
Nielsen, J.K.5
Khakimov, B.6
Olsen, C.E.7
Hansen, E.H.8
Kuzina, V.9
Ekstrøm, C.T.10
-
71
-
-
79955772476
-
A stereoselective hydroxylation step of alkaloid biosynthesis by a unique cytochrome P450 in Catharanthus roseus
-
Giddings L.A., Liscombe D.K., Hamilton J.P., Childs K.L., DellaPenna D., Buell C.R., O'Connor S.E. A stereoselective hydroxylation step of alkaloid biosynthesis by a unique cytochrome P450 in Catharanthus roseus. J Biol Chem 2011, 286:16751-16757.
-
(2011)
J Biol Chem
, vol.286
, pp. 16751-16757
-
-
Giddings, L.A.1
Liscombe, D.K.2
Hamilton, J.P.3
Childs, K.L.4
DellaPenna, D.5
Buell, C.R.6
O'Connor, S.E.7
-
72
-
-
84870570366
-
An alternative route to cyclic terpenes by reductive cyclization in iridoid biosynthesis
-
Geu-Flores F., Sherden N.H., Courdavault V., Burlat V., Glenn W.S., Wu C., Nims E., Cui Y., O'Connor S.E. An alternative route to cyclic terpenes by reductive cyclization in iridoid biosynthesis. Nature 2012, 492:138-142.
-
(2012)
Nature
, vol.492
, pp. 138-142
-
-
Geu-Flores, F.1
Sherden, N.H.2
Courdavault, V.3
Burlat, V.4
Glenn, W.S.5
Wu, C.6
Nims, E.7
Cui, Y.8
O'Connor, S.E.9
-
73
-
-
85043424304
-
Medicinal plants: a public resource for metabolomics and hypothesis development
-
Wurtele E., Chappell J., Jones A., Celiz M., Ransom N., Hur M., Rizshsky L., Crispin M., Dixon P., Liu J., et al. Medicinal plants: a public resource for metabolomics and hypothesis development. Metabolites 2012, 2:1031-1059.
-
(2012)
Metabolites
, vol.2
, pp. 1031-1059
-
-
Wurtele, E.1
Chappell, J.2
Jones, A.3
Celiz, M.4
Ransom, N.5
Hur, M.6
Rizshsky, L.7
Crispin, M.8
Dixon, P.9
Liu, J.10
-
74
-
-
84855180697
-
Triterpene functional genomics in licorice for identification of CYP72A154 involved in the biosynthesis of glycyrrhizin
-
Seki H., Sawai S., Ohyama K., Mizutani M., Ohnishi T., Sudo H., Fukushima E.O., Akashi T., Aoki T., Saito K., et al. Triterpene functional genomics in licorice for identification of CYP72A154 involved in the biosynthesis of glycyrrhizin. Plant Cell 2011, 23:4112-4123.
-
(2011)
Plant Cell
, vol.23
, pp. 4112-4123
-
-
Seki, H.1
Sawai, S.2
Ohyama, K.3
Mizutani, M.4
Ohnishi, T.5
Sudo, H.6
Fukushima, E.O.7
Akashi, T.8
Aoki, T.9
Saito, K.10
-
75
-
-
84860188187
-
Lysine decarboxylase catalyzes the first step of quinolizidine alkaloid biosynthesis and coevolved with alkaloid production in Leguminosae
-
Bunsupa S., Katayama K., Ikeura E., Oikawa A., Toyooka K., Saito K., Yamazaki M. Lysine decarboxylase catalyzes the first step of quinolizidine alkaloid biosynthesis and coevolved with alkaloid production in Leguminosae. Plant Cell 2012, 24:1202-1216.
-
(2012)
Plant Cell
, vol.24
, pp. 1202-1216
-
-
Bunsupa, S.1
Katayama, K.2
Ikeura, E.3
Oikawa, A.4
Toyooka, K.5
Saito, K.6
Yamazaki, M.7
-
76
-
-
84878904340
-
Suppression of camptothecin biosynthetic genes results in metabolic modification of secondary products in hairy roots of Ophiorrhiza pumila
-
Asano T., Kobayashi K., Kashihara E., Sudo H., Sasaki R., Iijima Y., Aoki K., Shibata D., Saito K., Yamazaki M. Suppression of camptothecin biosynthetic genes results in metabolic modification of secondary products in hairy roots of Ophiorrhiza pumila. Phytochemistry 2012, 10.1016/j.phytochem.2012.04.019.
-
(2012)
Phytochemistry
-
-
Asano, T.1
Kobayashi, K.2
Kashihara, E.3
Sudo, H.4
Sasaki, R.5
Iijima, Y.6
Aoki, K.7
Shibata, D.8
Saito, K.9
Yamazaki, M.10
-
77
-
-
84877936829
-
Coupling deep transcriptome analysis with untargeted metabolic profiling in Ophiorrhiza pumila to further the understanding of the biosynthesis of the anti-cancer alkaloid camptothecin and anthraquinones
-
Yamazaki M., Mochida K., Asano T., Nakabayashi R., Chiba M., Udomson N., Yamazaki Y., Goodenowe D.B., Sankawa U., Yoshida T., et al. Coupling deep transcriptome analysis with untargeted metabolic profiling in Ophiorrhiza pumila to further the understanding of the biosynthesis of the anti-cancer alkaloid camptothecin and anthraquinones. Plant Cell Physiol 2013, 10.1093/pcp/pct040.
-
(2013)
Plant Cell Physiol
-
-
Yamazaki, M.1
Mochida, K.2
Asano, T.3
Nakabayashi, R.4
Chiba, M.5
Udomson, N.6
Yamazaki, Y.7
Goodenowe, D.B.8
Sankawa, U.9
Yoshida, T.10
-
78
-
-
84864526044
-
Identification of olivetolic acid cyclase from Cannabis sativa reveals a unique catalytic route to plant polyketides
-
Gagne S.J., Stout J.M., Liu E., Boubakir Z., Clark S.M., Page J.E. Identification of olivetolic acid cyclase from Cannabis sativa reveals a unique catalytic route to plant polyketides. Proc Natl Acad Sci U S A 2012, 109:12811-12816.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 12811-12816
-
-
Gagne, S.J.1
Stout, J.M.2
Liu, E.3
Boubakir, Z.4
Clark, S.M.5
Page, J.E.6
-
79
-
-
84864419262
-
The hexanoyl-CoA precursor for cannabinoid biosynthesis is formed by an acyl-activating enzyme in Cannabis sativa trichomes
-
Stout J.M., Boubakir Z., Ambrose S.J., Purves R.W., Page J.E. The hexanoyl-CoA precursor for cannabinoid biosynthesis is formed by an acyl-activating enzyme in Cannabis sativa trichomes. Plant J 2012, 71:353-365.
-
(2012)
Plant J
, vol.71
, pp. 353-365
-
-
Stout, J.M.1
Boubakir, Z.2
Ambrose, S.J.3
Purves, R.W.4
Page, J.E.5
-
80
-
-
69949174213
-
CYP719B1 is salutaridine synthase, the C-C phenol-coupling enzyme of morphine biosynthesis in opium poppy
-
Gesell A., Rolf M., Ziegler J., Diaz Chavez M.L., Huang F.C., Kutchan T.M. CYP719B1 is salutaridine synthase, the C-C phenol-coupling enzyme of morphine biosynthesis in opium poppy. J Biol Chem 2009, 284:24432-24442.
-
(2009)
J Biol Chem
, vol.284
, pp. 24432-24442
-
-
Gesell, A.1
Rolf, M.2
Ziegler, J.3
Diaz Chavez, M.L.4
Huang, F.C.5
Kutchan, T.M.6
-
81
-
-
77949847651
-
Dioxygenases catalyze the O-demethylation steps of morphine biosynthesis in opium poppy
-
Hagel J.M., Facchini P.J. Dioxygenases catalyze the O-demethylation steps of morphine biosynthesis in opium poppy. Nat Chem Biol 2010, 6:273-275.
-
(2010)
Nat Chem Biol
, vol.6
, pp. 273-275
-
-
Hagel, J.M.1
Facchini, P.J.2
-
82
-
-
84862983375
-
A Papaver somniferum 10-gene cluster for synthesis of the anticancer alkaloid noscapine
-
Winzer T., Gazda V., He Z., Kaminski F., Kern M., Larson T.R., Li Y., Meade F., Teodor R., Vaistij F.E., et al. A Papaver somniferum 10-gene cluster for synthesis of the anticancer alkaloid noscapine. Science 2012, 336:1704-1708.
-
(2012)
Science
, vol.336
, pp. 1704-1708
-
-
Winzer, T.1
Gazda, V.2
He, Z.3
Kaminski, F.4
Kern, M.5
Larson, T.R.6
Li, Y.7
Meade, F.8
Teodor, R.9
Vaistij, F.E.10
-
83
-
-
70549112091
-
Integrated omics approaches in plant systems biology
-
Fukushima A., Kusano M., Redestig H., Arita M., Saito K. Integrated omics approaches in plant systems biology. Curr Opin Chem Biol 2009, 13:532-538.
-
(2009)
Curr Opin Chem Biol
, vol.13
, pp. 532-538
-
-
Fukushima, A.1
Kusano, M.2
Redestig, H.3
Arita, M.4
Saito, K.5
-
84
-
-
80053154348
-
Formation of plant metabolic gene clusters within dynamic chromosomal regions
-
Field B., Fiston-Lavier A.-S., Kemen A., Geisler K., Quesneville H., Osbourn A.E. Formation of plant metabolic gene clusters within dynamic chromosomal regions. Proc Natl Acad Sci U S A 2011, 108:16116-16121.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 16116-16121
-
-
Field, B.1
Fiston-Lavier, A.-S.2
Kemen, A.3
Geisler, K.4
Quesneville, H.5
Osbourn, A.E.6
-
85
-
-
44349191391
-
Mutations in topoisomerase I as a self-resistance mechanism coevolved with the production of the anticancer alkaloid camptothecin in plants
-
Sirikantaramas S., Yamazaki M., Saito K. Mutations in topoisomerase I as a self-resistance mechanism coevolved with the production of the anticancer alkaloid camptothecin in plants. Proc Natl Acad Sci U S A 2008, 105:6782-6786.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 6782-6786
-
-
Sirikantaramas, S.1
Yamazaki, M.2
Saito, K.3
-
86
-
-
80054695360
-
The draft genome and transcriptome of Cannabis sativa
-
van Bakel H., Stout J., Cote A., Tallon C., Sharpe A., Hughes T., Page J. The draft genome and transcriptome of Cannabis sativa. Genome Biol 2011, 12:R102.
-
(2011)
Genome Biol
, vol.12
-
-
van Bakel, H.1
Stout, J.2
Cote, A.3
Tallon, C.4
Sharpe, A.5
Hughes, T.6
Page, J.7
|