-
1
-
-
0042768158
-
Genome-wide insertional mutagenesis of Arabidopsis thaliana
-
Alonso, J.M., et al. (2003). Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science. 301, 653-657.
-
(2003)
Science
, vol.301
, pp. 653-657
-
-
Alonso, J.M.1
-
2
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y., and Hochberg, Y. (1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. Roy. Stat. Soc. B. 57, 289-300.
-
(1995)
J. Roy. Stat. Soc. B.
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
3
-
-
34547661514
-
Arabidopsis JAGGED LATERAL ORGANS is expressed in boundaries and coordinates KNOX and PIN activity
-
Borghi, L., Bureau, M., and Simon, R. (2007). Arabidopsis JAGGED LATERAL ORGANS is expressed in boundaries and coordinates KNOX and PIN activity. Plant Cell. 19, 1795-1808.
-
(2007)
Plant Cell
, vol.19
, pp. 1795-1808
-
-
Borghi, L.1
Bureau, M.2
Simon, R.3
-
4
-
-
33646849051
-
Ramosa2 encodes a LATERAL ORGAN BOUNDARY domain protein that determines the fate of stem cells in branch meristems of maize
-
Bortiri, E., Chuck, G., Vollbrecht, E., Rocheford, T., Martienssen, R., and Hake, S. (2006). ramosa2 encodes a LATERAL ORGAN BOUNDARY domain protein that determines the fate of stem cells in branch meristems of maize. Plant Cell. 18, 574-585.
-
(2006)
Plant Cell
, vol.18
, pp. 574-585
-
-
Bortiri, E.1
Chuck, G.2
Vollbrecht, E.3
Rocheford, T.4
Martienssen, R.5
Hake, S.6
-
5
-
-
17844361960
-
ASYMMETRIC LEAVES2-LIKE1 gene, a member of the AS2/LOB family, controls proximal-distal patterning in Arabidopsis petals
-
Chalfun-Junior, A., Franken, J., Mes, J.J., Marsch-Martinez, N., Pereira, A., and Angenent, G.C. (2005). ASYMMETRIC LEAVES2-LIKE1 gene, a member of the AS2/LOB family, controls proximal-distal patterning in Arabidopsis petals. Plant Mol. Biol. 57, 559-575.
-
(2005)
Plant Mol. Biol.
, vol.57
, pp. 559-575
-
-
Chalfun-Junior, A.1
Franken, J.2
Mes, J.J.3
Marsch-Martinez, N.4
Pereira, A.5
Angenent, G.C.6
-
6
-
-
0032447801
-
Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
-
Clough, S.J., and Bent, A.F. (1998). Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16, 735-743.
-
(1998)
Plant J
, vol.16
, pp. 735-743
-
-
Clough, S.J.1
Bent, A.F.2
-
7
-
-
6344245668
-
A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsi
-
Cook, D., Fowler, S., Fiehn, O., and Thomashow, M.F. (2004). A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis. Proc. Natl Acad. Sci. U S A. 101, 15243-15248.
-
(2004)
Proc. Natl Acad. Sci. U S A.
, vol.101
, pp. 15243-15248
-
-
Cook, D.1
Fowler, S.2
Fiehn, O.3
Thomashow, M.F.4
-
8
-
-
0035983344
-
C: N ratio increases in the phloem sap during floral transition of the long-day plants Sinapis alba and Arabidopsis thaliana
-
Corbesier, L., Bernier, G., and Perilleux, C. (2002). C:N ratio increases in the phloem sap during floral transition of the long-day plants Sinapis alba and Arabidopsis thaliana. Plant Cell Physiol. 43, 684-688.
-
(2002)
Plant Cell Physiol
, vol.43
, pp. 684-688
-
-
Corbesier, L.1
Bernier, G.2
Perilleux, C.3
-
9
-
-
0032076005
-
Arabidopsis gls mutants and distinct Fd-GOGAT genes: Implications for photorespiration and primary nitrogen assimilation
-
Coschigano, K.T., Melo-Oliveira, R., Lim, J., and Coruzzi, G.M. (1998). Arabidopsis gls mutants and distinct Fd-GOGAT genes: implications for photorespiration and primary nitrogen assimilation. Plant Cell. 10, 741-752.
-
(1998)
Plant Cell
, vol.10
, pp. 741-752
-
-
Coschigano, K.T.1
Melo-Oliveira, R.2
Lim, J.3
Coruzzi, G.M.4
-
10
-
-
32644481938
-
Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis
-
Czechowski, T., Stitt, M., Altmann, T., Udvardi, M.K., and Scheible, W.R. (2005). Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol. 139, 5-17.
-
(2005)
Plant Physiol
, vol.139
, pp. 5-17
-
-
Czechowski, T.1
Stitt, M.2
Altmann, T.3
Udvardi, M.K.4
Scheible, W.R.5
-
11
-
-
0001773839
-
Senescence and programmed cell death
-
Buchanan B., GruissemW., and Jones R., eds (Rockville, MD: American Society of Plant Physiologists)
-
Dangl, J.L., Dietrich, R.A., and Thomas, H. (2000). Senescence and programmed cell death. In Biochemistry and Molecular Biology of Plants, Buchanan B., GruissemW., and Jones R., eds (Rockville, MD: American Society of Plant Physiologists), pp. 1044-1100.
-
(2000)
Biochemistry and Molecular Biology of Plants
, pp. 1044-1100
-
-
Dangl, J.L.1
Dietrich, R.A.2
Thomas, H.3
-
12
-
-
47249092600
-
Nitrogen recycling and remobilization are differentially controlled by leaf senescence and development stage in Arabidopsis under low nitrogen nutrition
-
Diaz, C., et al. (2008). Nitrogen recycling and remobilization are differentially controlled by leaf senescence and development stage in Arabidopsis under low nitrogen nutrition. Plant Physiol. 147, 1437-1449.
-
(2008)
Plant Physiol
, vol.147
, pp. 1437-1449
-
-
Diaz, C.1
-
13
-
-
26944475209
-
Characterization of markers to determine the extent and variability of leaf senescence in Arabidopsis: A metabolic profiling approach
-
Diaz, C., Purdy, S., Christ, A., Morot-Gaudry, J.F., Wingler, A., and Masclaux-Daubresse, C. (2005). Characterization of markers to determine the extent and variability of leaf senescence in Arabidopsis: a metabolic profiling approach. Plant Physiol. 138, 898-908.
-
(2005)
Plant Physiol
, vol.138
, pp. 898-908
-
-
Diaz, C.1
Purdy, S.2
Christ, A.3
Morot-Gaudry, J.F.4
Wingler, A.5
Masclaux-Daubresse, C.6
-
14
-
-
34249794579
-
The indeterminate gametophyte1 gene of maize encodes a LOB domain protein required for embryo Sac and leaf development
-
Evans, M.M. (2007). The indeterminate gametophyte1 gene of maize encodes a LOB domain protein required for embryo Sac and leaf development. Plant Cell. 19, 46-62.
-
(2007)
Plant Cell
, vol.19
, pp. 46-62
-
-
Evans, M.M.1
-
15
-
-
58149330201
-
Metabolomics-assisted breeding: A viable option for crop improvement?
-
Fernie, A.R., and Schauer, N. (2009).Metabolomics-assisted breeding: a viable option for crop improvement? Trends Genet. 25, 39-48.
-
(2009)
Trends Genet
, vol.25
, pp. 39-48
-
-
Fernie, A.R.1
Schauer, N.2
-
16
-
-
4444277707
-
Innovation: Metabolite profiling: From diagnostics to systems biology
-
Fernie, A.R., Trethewey, R.N., Krotzky, A.J., and Willmitzer, L. (2004). Innovation: metabolite profiling: from diagnostics to systems biology. Nat. Rev. Mol. Cell Biol. 5, 763-769.
-
(2004)
Nat. Rev. Mol. Cell Biol.
, vol.5
, pp. 763-769
-
-
Fernie, A.R.1
Trethewey, R.N.2
Krotzky, A.J.3
Willmitzer, L.4
-
17
-
-
0033757963
-
Metabolite profiling for plant functional genomics
-
Fiehn, O., Kopka, J., Dormann, P., Altmann, T., Trethewey, R.N., and Willmitzer, L. (2000). Metabolite profiling for plant functional genomics. Nat. Biotechnol. 18, 1157-1161.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 1157-1161
-
-
Fiehn, O.1
Kopka, J.2
Dormann, P.3
Altmann, T.4
Trethewey, R.N.5
Willmitzer, L.6
-
18
-
-
66349124175
-
Impact of clock-associated Arabidopsis pseudo-response regulators in metabolic coordination
-
Fukushima, A., et al. (2009). Impact of clock-associated Arabidopsis pseudo-response regulators in metabolic coordination. Proc. Natl Acad. Sci. U S A. 106, 7251-7256.
-
(2009)
Proc. Natl Acad. Sci. U S A.
, vol.106
, pp. 7251-7256
-
-
Fukushima, A.1
-
19
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman, R.C., et al. (2004). Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 5, R80.
-
(2004)
Genome Biol
, vol.5
-
-
Gentleman, R.C.1
-
20
-
-
1842462559
-
Transcriptome of Arabidopsis leaf senescence
-
Guo, Y., Cai, Z., and Gan, S. (2004). Transcriptome of Arabidopsis leaf senescence. Plant Cell Environ. 27, 521-549.
-
(2004)
Plant Cell Environ
, vol.27
, pp. 521-549
-
-
Guo, Y.1
Cai, Z.2
Gan, S.3
-
21
-
-
42449106989
-
Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1
-
Gutierrez, R.A., et al. (2008). Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1. Proc. Natl Acad. Sci. U S A. 105, 4939-4944.
-
(2008)
Proc. Natl Acad. Sci. U S A.
, vol.105
, pp. 4939-4944
-
-
Gutierrez, R.A.1
-
22
-
-
34147133691
-
Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis
-
Gutierrez, R.A., Lejay, L.V., Dean, A., Chiaromonte, F., Shasha, D.E., and Coruzzi, G.M. (2007). Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis. Genome Biol. 8, R7.
-
(2007)
Genome Biol
, vol.8
-
-
Gutierrez, R.A.1
Lejay, L.V.2
Dean, A.3
Chiaromonte, F.4
Shasha, D.E.5
Coruzzi, G.M.6
-
23
-
-
33645070537
-
Plant metabolomics: From holistic hope, to hype, to hot topic
-
Hall, R.D. (2006). Plant metabolomics: from holistic hope, to hype, to hot topic. New Phytol. 169, 453-468.
-
(2006)
New Phytol
, vol.169
, pp. 453-468
-
-
Hall, R.D.1
-
24
-
-
0030087796
-
Leaf senescence in Brassica napus: Expression of genes encoding pathogenesis-related proteins
-
Hanfrey, C., Fife, M., and Buchanan-Wollaston, V. (1996). Leaf senescence in Brassica napus: expression of genes encoding pathogenesis-related proteins. Plant Mol. Biol. 30, 597-609.
-
(1996)
Plant Mol. Biol.
, vol.30
, pp. 597-609
-
-
Hanfrey, C.1
Fife, M.2
Buchanan-Wollaston, V.3
-
25
-
-
33845523291
-
The FOX hunting system: An alternative gain-of-function gene hunting technique
-
Ichikawa, T., et al. (2006). The FOX hunting system: an alternative gain-of-function gene hunting technique. Plant J. 48, 974-985.
-
(2006)
Plant J
, vol.48
, pp. 974-985
-
-
Ichikawa, T.1
-
26
-
-
27744565583
-
Crown rootless1, which is essential for crown root formation in rice, is a target of an AUXIN RESPONSE FACTOR in auxin signaling
-
Inukai, Y., et al. (2005). Crown rootless1, which is essential for crown root formation in rice, is a target of an AUXIN RESPONSE FACTOR in auxin signaling. Plant Cell. 17, 1387-1396.
-
(2005)
Plant Cell
, vol.17
, pp. 1387-1396
-
-
Inukai, Y.1
-
27
-
-
0142121516
-
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
-
Irizarry, R.A., et al. (2003). Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics. 4, 249-264.
-
(2003)
Biostatistics
, vol.4
, pp. 249-264
-
-
Irizarry, R.A.1
-
28
-
-
0036016847
-
The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper
-
Iwakawa, H., et al. (2002). The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper. Plant Cell Physiol. 43, 467-478.
-
(2002)
Plant Cell Physiol
, vol.43
, pp. 467-478
-
-
Iwakawa, H.1
-
29
-
-
34447092534
-
Expression of the ASYMMETRIC LEAVES2 gene in the adaxial domain of Arabidopsis leaves represses cell proliferation in this domain and is critical for the development of properly expanded leaves
-
Iwakawa, H., et al. (2007). Expression of the ASYMMETRIC LEAVES2 gene in the adaxial domain of Arabidopsis leaves represses cell proliferation in this domain and is critical for the development of properly expanded leaves. Plant J. 51, 173-184.
-
(2007)
Plant J
, vol.51
, pp. 173-184
-
-
Iwakawa, H.1
-
30
-
-
33947493669
-
Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool
-
Joshi, V., Laubengayer, K.M., Schauer, N., Fernie, A.R., and Jander, G. (2006). Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool. Plant Cell. 18, 3564-3575.
-
(2006)
Plant Cell
, vol.18
, pp. 3564-3575
-
-
Joshi, V.1
Laubengayer, K.M.2
Schauer, N.3
Fernie, A.R.4
Jander, G.5
-
31
-
-
0001128082
-
A role for glutamine synthetase in the remobilization of leaf nitrogen during natural senescence in rice leaves
-
Kamachi, K., Yamaya, T., Mae, T., and Ojima, K. (1991). A role for glutamine synthetase in the remobilization of leaf nitrogen during natural senescence in rice leaves. Plant Physiol. 96, 411-417.
-
(1991)
Plant Physiol
, vol.96
, pp. 411-417
-
-
Kamachi, K.1
Yamaya, T.2
Mae, T.3
Ojima, K.4
-
32
-
-
16644398573
-
Exploring the temperature-stress metabolome of Arabidopsis
-
Kaplan, F., et al. (2004). Exploring the temperature-stress metabolome of Arabidopsis. Plant Physiol. 136, 4159-4168.
-
(2004)
Plant Physiol
, vol.136
, pp. 4159-4168
-
-
Kaplan, F.1
-
33
-
-
0033521167
-
Activation tagging of the floral inducer FT
-
Kardailsky, I., et al. (1999). Activation tagging of the floral inducer FT. Science. 286, 1962-1965.
-
(1999)
Science
, vol.286
, pp. 1962-1965
-
-
Kardailsky, I.1
-
34
-
-
11144322224
-
The DNA-binding protease, CND41, and the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase in senescent leaves of tobacco
-
Kato, Y., et al. (2004). The DNA-binding protease, CND41, and the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase in senescent leaves of tobacco. Planta. 220, 97-104.
-
(2004)
Planta
, vol.220
, pp. 97-104
-
-
Kato, Y.1
-
35
-
-
0033638823
-
Gamma aminobutyric acid (GABA) and plant responses to stress
-
Kinnersley, A.M., and Turano, F.J. (2000). Gamma aminobutyric acid (GABA) and plant responses to stress. CRC Crit. Rev. Plant Sci. 19, 479-509.
-
(2000)
CRC Crit. Rev. Plant Sci.
, vol.19
, pp. 479-509
-
-
Kinnersley, A.M.1
Turano, F.J.2
-
36
-
-
0033520985
-
A pair of related genes with antagonistic roles in mediating flowering signals
-
Kobayashi, Y., Kaya, H., Goto, K., Iwabuchi, M., and Araki, T. (1999). A pair of related genes with antagonistic roles in mediating flowering signals. Science. 286, 1960-1962.
-
(1999)
Science
, vol.286
, pp. 1960-1962
-
-
Kobayashi, Y.1
Kaya, H.2
Goto, K.3
Iwabuchi, M.4
Araki, T.5
-
37
-
-
61349141170
-
Systematic approaches to using the FOX hunting system to identify useful rice genes
-
Kondou, Y., et al. (2009). Systematic approaches to using the FOX hunting system to identify useful rice genes. Plant J. 57, 883-894.
-
(2009)
Plant J
, vol.57
, pp. 883-894
-
-
Kondou, Y.1
-
38
-
-
33747086178
-
A novel nuclear-localized CCCH-type zinc finger protein, OsDOS, is involved in delaying leaf senescence in rice
-
Kong, Z., Li, M., Yang, W., Xu, W., and Xue, Y. (2006). A novel nuclear-localized CCCH-type zinc finger protein, OsDOS, is involved in delaying leaf senescence in rice. Plant Physiol. 141, 1376-1388.
-
(2006)
Plant Physiol
, vol.141
, pp. 1376-1388
-
-
Kong, Z.1
Li, M.2
Yang, W.3
Xu, W.4
Xue, Y.5
-
39
-
-
45949109669
-
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
-
Kumar, S., Nei, M., Dudley, J., and Tamura, K. (2008). MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform. 9, 299-306.
-
(2008)
Brief Bioinform
, vol.9
, pp. 299-306
-
-
Kumar, S.1
Nei, M.2
Dudley, J.3
Tamura, K.4
-
40
-
-
37849016716
-
Unbiased characterization of genotypedependent metabolic regulations by metabolomic approach in Arabidopsis thaliana
-
Kusano, M., et al. (2007). Unbiased characterization of genotypedependent metabolic regulations by metabolomic approach in Arabidopsis thaliana. BMC Syst. Biol. 1, 53.
-
(2007)
BMC Syst. Biol.
, vol.1
, pp. 53
-
-
Kusano, M.1
-
41
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin, M.A., et al. (2007). Clustal W and Clustal X version 2.0. Bioinformatics. 23, 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
-
42
-
-
33846675296
-
Asparagine in plants
-
Lea, P.J., Sodek, L., Parry, M.A.J., Shewry, P.R., and Halford, N.G. (2007). Asparagine in plants. Ann. Appl. Biol. 150, 1-26.
-
(2007)
Ann. Appl. Biol.
, vol.150
, pp. 1-26
-
-
Lea, P.J.1
Sodek, L.2
Parry, M.A.J.3
Shewry, P.R.4
Halford, N.G.5
-
43
-
-
22044453231
-
ARL1, a LOB-domain protein required for adventitious root formation in rice
-
Liu, H., et al. (2005). ARL1, a LOB-domain protein required for adventitious root formation in rice. Plant J. 43, 47-56.
-
(2005)
Plant J
, vol.43
, pp. 47-56
-
-
Liu, H.1
-
44
-
-
24344508130
-
A microarray analysis of the rice transcriptome and its comparison to Arabidopsis
-
Ma, L., et al. (2005). A microarray analysis of the rice transcriptome and its comparison to Arabidopsis. Genome Res. 15, 1274-1283.
-
(2005)
Genome Res
, vol.15
, pp. 1274-1283
-
-
Ma, L.1
-
45
-
-
0000121454
-
Photosynthesis and ribulose 1,5-bisphosphate carboxylase in rice leaves: Changes in photosynthesis and enzymes involved in carbon assimilation from leaf development through senescence
-
Makino, A., Mae, T., and Ohira, K. (1983). Photosynthesis and ribulose 1,5-bisphosphate carboxylase in rice leaves: changes in photosynthesis and enzymes involved in carbon assimilation from leaf development through senescence. Plant Physiol. 73, 1002-1007.
-
(1983)
Plant Physiol
, vol.73
, pp. 1002-1007
-
-
Makino, A.1
Mae, T.2
Ohira, K.3
-
46
-
-
33646832773
-
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco
-
Masclaux-Daubresse, C., et al. (2006). Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco. Plant Physiol. 140, 444-456.
-
(2006)
Plant Physiol
, vol.140
, pp. 444-456
-
-
Masclaux-Daubresse, C.1
-
47
-
-
66149180806
-
Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and molecular comparisons between AS2 and other family members
-
Matsumura, Y., Iwakawa, H., Machida, Y., and Machida, C. (2009). Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and molecular comparisons between AS2 and other family members. Plant J. 58, 525-537.
-
(2009)
Plant J
, vol.58
, pp. 525-537
-
-
Matsumura, Y.1
Iwakawa, H.2
MacHida, Y.3
MacHida, C.4
-
48
-
-
0036010144
-
The role of glutamine synthetase and glutamate dehydrogenase in nitrogen assimilation and possibilities for improvement in the nitrogen utilization of crops
-
Miflin, B.J., and Habash, D.Z. (2002). The role of glutamine synthetase and glutamate dehydrogenase in nitrogen assimilation and possibilities for improvement in the nitrogen utilization of crops. J. Exp. Bot. 53, 979-987.
-
(2002)
J. Exp. Bot.
, vol.53
, pp. 979-987
-
-
Miflin, B.J.1
Habash, D.Z.2
-
49
-
-
35348934989
-
A genome-wide gain-of function analysis of rice genes using the FOX-hunting system
-
Nakamura, H., et al. (2007). A genome-wide gain-of function analysis of rice genes using the FOX-hunting system. Plant Mol. Biol. 65, 357-371.
-
(2007)
Plant Mol. Biol.
, vol.65
, pp. 357-371
-
-
Nakamura, H.1
-
50
-
-
0037228329
-
Selection of hygromycin-resistant Arabidopsis seedlings
-
Nakazawa, M., and Matsui, M. (2003). Selection of hygromycin-resistant Arabidopsis seedlings. Biotechniques. 34, 28-30.
-
(2003)
Biotechniques
, vol.34
, pp. 28-30
-
-
Nakazawa, M.1
Matsui, M.2
-
51
-
-
0038806431
-
Activation tagging, a novel tool to dissect the functions of a gene family
-
Nakazawa, M., et al. (2003). Activation tagging, a novel tool to dissect the functions of a gene family. Plant J. 34, 741-750.
-
(2003)
Plant J
, vol.34
, pp. 741-750
-
-
Nakazawa, M.1
-
52
-
-
0036068990
-
How does photorespiration modulate leaf amino acid contents? A dual approach through modelling and metabolite analysis
-
Novitskaya, L., Trevanion, S., Driscoll, S., Foyer, C., and Noctor, G. (2002). How does photorespiration modulate leaf amino acid contents? A dual approach through modelling and metabolite analysis. Plant Cell Environ. 25, 821-835.
-
(2002)
Plant Cell Environ
, vol.25
, pp. 821-835
-
-
Novitskaya, L.1
Trevanion, S.2
Driscoll, S.3
Foyer, C.4
Noctor, G.5
-
53
-
-
58149334031
-
Rice metabolomics
-
Oikawa, A., Matsuda, F., Kusano, M., Okazaki, Y., and Saito, K. (2008). Rice metabolomics. Rice. 1, 63-71.
-
(2008)
Rice
, vol.1
, pp. 63-71
-
-
Oikawa, A.1
Matsuda, F.2
Kusano, M.3
Okazaki, Y.4
Saito, K.5
-
54
-
-
34249789596
-
ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis
-
Okushima, Y., Fukaki, H., Onoda, M., Theologis, A., and Tasaka, M. (2007). ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis. Plant Cell. 19, 118-130.
-
(2007)
Plant Cell
, vol.19
, pp. 118-130
-
-
Okushima, Y.1
Fukaki, H.2
Onoda, M.3
Theologis, A.4
Tasaka, M.5
-
55
-
-
31544446625
-
The two senescence-related markers, GS1 (cytosolic glutamine synthetase) and GDH (glutamate dehydrogenase), involved in nitrogen mobilization, are differentially regulated during pathogen attack and by stress hormones and reactive oxygen species in Nicotiana tabacum L
-
Pageau, K., Reisdorf-Cren, M., Morot-Gaudry, J.F., and Masclaux-Daubresse, C. (2006). The two senescence-related markers, GS1 (cytosolic glutamine synthetase) and GDH (glutamate dehydrogenase), involved in nitrogen mobilization, are differentially regulated during pathogen attack and by stress hormones and reactive oxygen species in Nicotiana tabacum L. leaves. J. Exp. Bot. 57, 547-557.
-
(2006)
Leaves. J. Exp. Bot.
, vol.57
, pp. 547-557
-
-
Pageau, K.1
Reisdorf-Cren, M.2
Morot-Gaudry, J.F.3
Masclaux-Daubresse, C.4
-
56
-
-
34250644118
-
The senescence-induced staygreen protein regulates chlorophyll degradation
-
Park, S.Y., et al. (2007). The senescence-induced staygreen protein regulates chlorophyll degradation. Plant Cell. 19, 1649-1664.
-
(2007)
Plant Cell
, vol.19
, pp. 1649-1664
-
-
Park, S.Y.1
-
57
-
-
0033137039
-
Diverse range of gene activity during Arabidopsis thaliana leaf senescence includes pathogen-independent induction of defense-related genes
-
Quirino, B.F., Normanly, J., and Amasino, R.M. (1999). Diverse range of gene activity during Arabidopsis thaliana leaf senescence includes pathogen-independent induction of defense-related genes. Plant Mol. Biol. 40, 267-278.
-
(1999)
Plant Mol. Biol.
, vol.40
, pp. 267-278
-
-
Quirino, B.F.1
Normanly, J.2
Amasino, R.M.3
-
58
-
-
0035164274
-
Overlapping expression of cytosolic glutamine synthetase and phenylalanine ammonia-lyase in immature leaf blades of rice
-
Sakurai, N., Katayama, Y., and Yamaya, T. (2001). Overlapping expression of cytosolic glutamine synthetase and phenylalanine ammonia-lyase in immature leaf blades of rice. Physiol. Plant. 113, 400-408.
-
(2001)
Physiol. Plant.
, vol.113
, pp. 400-408
-
-
Sakurai, N.1
Katayama, Y.2
Yamaya, T.3
-
59
-
-
5144227035
-
Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection
-
Sato, S., Soga, T., Nishioka, T., and Tomita, M. (2004). Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection. Plant J. 40, 151-163.
-
(2004)
Plant J
, vol.40
, pp. 151-163
-
-
Sato, S.1
Soga, T.2
Nishioka, T.3
Tomita, M.4
-
60
-
-
0000947453
-
Metabolic profiling of plants: A new diagnostic technique
-
Baker D., Feynes J.G., and Moberg W.K., eds (Washington, DC: American Chemical Society)
-
Sauter, H., Lauer, M., and Fritsh, H. (1991). Metabolic profiling of plants: a new diagnostic technique. In American Chemical Society Symposium Series, Baker D., Feynes J.G., and Moberg W.K., eds (Washington, DC: American Chemical Society), pp. 288-299.
-
(1991)
American Chemical Society Symposium Series
, pp. 288-299
-
-
Sauter, H.1
Lauer, M.2
Fritsh, H.3
-
61
-
-
48249152281
-
Mode of inheritance of primary metabolic traits in tomato
-
Schauer, N., et al. (2008). Mode of inheritance of primary metabolic traits in tomato. Plant Cell. 20, 509-523.
-
(2008)
Plant Cell
, vol.20
, pp. 509-523
-
-
Schauer, N.1
-
62
-
-
16544392329
-
Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen
-
Scheible, W.R., et al. (2004). Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiol. 136, 2483-2499.
-
(2004)
Plant Physiol
, vol.136
, pp. 2483-2499
-
-
Scheible, W.R.1
-
63
-
-
0034985159
-
The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana regulates formation of a symmetric lamina, establishment of venation and repression of meristemrelated homeobox genes in leaves
-
Semiarti, E., Ueno, Y., Tsukaya, H., Iwakawa, H., Machida, C., and Machida, Y. (2001). The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana regulates formation of a symmetric lamina, establishment of venation and repression of meristemrelated homeobox genes in leaves. Development. 128, 1771-1783.
-
(2001)
Development
, vol.128
, pp. 1771-1783
-
-
Semiarti, E.1
Ueno, Y.2
Tsukaya, H.3
Iwakawa, H.4
MacHida, C.5
MacHida, Y.6
-
64
-
-
0035983659
-
The lateral organ boundaries gene defines a novel, plant-specific gene family
-
Shuai, B., Reynaga-Pena, C.G., and Springer, P.S. (2002). The lateral organ boundaries gene defines a novel, plant-specific gene family. Plant Physiol. 129, 747-761.
-
(2002)
Plant Physiol
, vol.129
, pp. 747-761
-
-
Shuai, B.1
Reynaga-Pena, C.G.2
Springer, P.S.3
-
65
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Smyth, G.K. (2004). Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3, Article3.
-
(2004)
Stat. Appl. Genet. Mol. Biol.
, vol.3
-
-
Smyth, G.K.1
-
66
-
-
34248374337
-
The maize (Zea mays L.) RTCS gene encodes a LOB domain protein that is a key regulator of embryonic seminal and post-embryonic shoot-borne root initiation
-
Taramino, G., et al. (2007). The maize (Zea mays L.) RTCS gene encodes a LOB domain protein that is a key regulator of embryonic seminal and post-embryonic shoot-borne root initiation. Plant J. 50, 649-659.
-
(2007)
Plant J
, vol.50
, pp. 649-659
-
-
Taramino, G.1
-
67
-
-
23044510825
-
Biomarker metabolites capturing the metabolite variance present in a rice plant developmental period
-
Tarpley, L., Duran, A.L., Kebrom, T.H., and Sumner, L.W. (2005). Biomarker metabolites capturing the metabolite variance present in a rice plant developmental period. BMC Plant Biol. 5, 8.
-
(2005)
BMC Plant Biol
, vol.5
, pp. 8
-
-
Tarpley, L.1
Duran, A.L.2
Kebrom, T.H.3
Sumner, L.W.4
-
68
-
-
33644878525
-
The flowering integrator FT regulates SEPALLATA3 and FRUITFULL accumulation in Arabidopsis leaves
-
Teper-Bamnolker, P., and Samach, A. (2005). The flowering integrator FT regulates SEPALLATA3 and FRUITFULL accumulation in Arabidopsis leaves. Plant Cell. 17, 2661-2675.
-
(2005)
Plant Cell
, vol.17
, pp. 2661-2675
-
-
Teper-Bamnolker, P.1
Samach, A.2
-
69
-
-
0032127540
-
Lipid metabolism during plant senescence
-
Thompson, J.E., Froese, C.D., Madey, E., Smith, M.D., and Hong, Y. (1998). Lipid metabolism during plant senescence. Prog. Lipid Res. 37, 119-141.
-
(1998)
Prog. Lipid Res.
, vol.37
, pp. 119-141
-
-
Thompson, J.E.1
Froese, C.D.2
Madey, E.3
Smith, M.D.4
Hong, Y.5
-
70
-
-
17044369876
-
Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants overexpressing an MYB transcription factor
-
Tohge, T., et al. (2005). Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants overexpressing an MYB transcription factor. Plant J. 42, 218-235.
-
(2005)
Plant J
, vol.42
, pp. 218-235
-
-
Tohge, T.1
-
71
-
-
33748319354
-
Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice
-
Toki, S., et al. (2006). Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice. Plant J. 47, 969-976.
-
(2006)
Plant J
, vol.47
, pp. 969-976
-
-
Toki, S.1
-
72
-
-
49249105137
-
The Arabidopsis sweetie mutant is affected in carbohydrate metabolism and defective in the control of growth, development and senescence
-
Veyres, N., et al. (2008). The Arabidopsis sweetie mutant is affected in carbohydrate metabolism and defective in the control of growth, development and senescence. Plant J. 55, 665-686.
-
(2008)
Plant J
, vol.55
, pp. 665-686
-
-
Veyres, N.1
-
73
-
-
0037783247
-
Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1,000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism
-
Wang, R., Okamoto, M., Xing, X., and Crawford, N.M. (2003). Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1,000 rapidly responding genes and new linkages to glucose, trehalose-6- phosphate, iron, and sulfate metabolism. Plant Physiol. 132, 556-567.
-
(2003)
Plant Physiol
, vol.132
, pp. 556-567
-
-
Wang, R.1
Okamoto, M.2
Xing, X.3
Crawford, N.M.4
-
74
-
-
0032104807
-
A comparison of the expression patterns of several senescenceassociated genes in response to stress and hormone treatment
-
Weaver, L.M., Gan, S., Quirino, B., and Amasino, R.M. (1998). A comparison of the expression patterns of several senescenceassociated genes in response to stress and hormone treatment. Plant Mol. Biol. 37, 455-469.
-
(1998)
Plant Mol. Biol.
, vol.37
, pp. 455-469
-
-
Weaver, L.M.1
Gan, S.2
Quirino, B.3
Amasino, R.M.4
-
75
-
-
2442647715
-
Differential metabolic networks unravel the effects of silent plant phenotypes
-
Weckwerth, W., Loureiro, M.E., Wenzel, K., and Fiehn, O. (2004). Differential metabolic networks unravel the effects of silent plant phenotypes. Proc. Natl Acad. Sci. U S A. 101, 7809-7814.
-
(2004)
Proc. Natl Acad. Sci. U S A.
, vol.101
, pp. 7809-7814
-
-
Weckwerth, W.1
Loureiro, M.E.2
Wenzel, K.3
Fiehn, O.4
-
76
-
-
0242300620
-
Empirical analysis of transcriptional activity in the Arabidopsis genome
-
Yamada, K., et al. (2003). Empirical analysis of transcriptional activity in the Arabidopsis genome. Science. 302, 842-846.
-
(2003)
Science
, vol.302
, pp. 842-846
-
-
Yamada, K.1
-
77
-
-
33645010559
-
Comparison end evolution analysis of two rice subspecies LATERAL ORGAN BOUNDARIES domain gene family and their evolutionary characterization from Arabidopsis
-
Yang, Y., Yu, X., and Wu, P. (2006). Comparison end evolution analysis of two rice subspecies LATERAL ORGAN BOUNDARIES domain gene family and their evolutionary characterization from Arabidopsis. Mol. Phylogenet. Evol. 39, 248-262.
-
(2006)
Mol. Phylogenet. Evol.
, vol.39
, pp. 248-262
-
-
Yang, Y.1
Yu, X.2
Wu, P.3
|