-
1
-
-
77958087983
-
Characterization of human fibroblast-derived extracellular matrix components for human pluripotent stem cell propagation
-
Abraham S., Riggs M.J., Nelson K., Lee V., Rao R.R. (2010) Characterization of human fibroblast-derived extracellular matrix components for human pluripotent stem cell propagation. Acta Biomater. 6, 4622-4633.
-
(2010)
Acta Biomater.
, vol.6
, pp. 4622-4633
-
-
Abraham, S.1
Riggs, M.J.2
Nelson, K.3
Lee, V.4
Rao, R.R.5
-
2
-
-
77952477710
-
Development of a three dimensional multiscale computational model of the human epidermis
-
Adra S., Sun T., MacNeil S., Holcombe M., Smallwood R. (2010) Development of a three dimensional multiscale computational model of the human epidermis. PLoS ONE 5, e8511.
-
(2010)
PLoS ONE
, vol.5
-
-
Adra, S.1
Sun, T.2
MacNeil, S.3
Holcombe, M.4
Smallwood, R.5
-
3
-
-
0037435030
-
Mass spectrometry-based proteomics
-
Aebersold R. & Mann M. (2003) Mass spectrometry-based proteomics. Nature 422, 198-207.
-
(2003)
Nature
, vol.422
, pp. 198-207
-
-
Aebersold, R.1
Mann, M.2
-
4
-
-
80053899538
-
Unraveling the human bone microenvironment beyond the classical extracellular matrix proteins: a human bone protein library
-
Alves R.D., Demmers J.A., Bezstarosti K. et al. (2011) Unraveling the human bone microenvironment beyond the classical extracellular matrix proteins: a human bone protein library. J. Proteome Res. 10, 4725-4733.
-
(2011)
J. Proteome Res.
, vol.10
, pp. 4725-4733
-
-
Alves, R.D.1
Demmers, J.A.2
Bezstarosti, K.3
-
5
-
-
79955386081
-
Networked-based characterization of extracellular matrix proteins from adult mouse pulmonary and aortic valves
-
Angel P.M., Nusinow D., Brown C.B. et al. (2011) Networked-based characterization of extracellular matrix proteins from adult mouse pulmonary and aortic valves. J. Proteome Res. 10, 812-823.
-
(2011)
J. Proteome Res.
, vol.10
, pp. 812-823
-
-
Angel, P.M.1
Nusinow, D.2
Brown, C.B.3
-
6
-
-
33751179915
-
What mouse mutants teach us about extracellular matrix function
-
Aszódi A., Legate K.R., Nakchbandi I., Fässler R. (2006) What mouse mutants teach us about extracellular matrix function. Annu. Rev. Cell Dev. Biol. 22, 591-621.
-
(2006)
Annu. Rev. Cell Dev. Biol.
, vol.22
, pp. 591-621
-
-
Aszódi, A.1
Legate, K.R.2
Nakchbandi, I.3
Fässler, R.4
-
7
-
-
77956468008
-
Molecular interactions in the retinal basement membrane system: a proteomic approach
-
Balasubramani M., Schreiber E.M., Candiello J., Balasubramani G.K., Kurtz J., Halfter W. (2010) Molecular interactions in the retinal basement membrane system: a proteomic approach. Matrix Biol. 29, 471-483.
-
(2010)
Matrix Biol.
, vol.29
, pp. 471-483
-
-
Balasubramani, M.1
Schreiber, E.M.2
Candiello, J.3
Balasubramani, G.K.4
Kurtz, J.5
Halfter, W.6
-
8
-
-
84857615660
-
Proteomics analysis of cardiac extracellular matrix remodeling in a porcine model of ischemia/reperfusion injury
-
Barallobre-Barreiro J., Didangelos A., Schoendube F.A. et al. (2012) Proteomics analysis of cardiac extracellular matrix remodeling in a porcine model of ischemia/reperfusion injury. Circulation 125, 789-802.
-
(2012)
Circulation
, vol.125
, pp. 789-802
-
-
Barallobre-Barreiro, J.1
Didangelos, A.2
Schoendube, F.A.3
-
9
-
-
84864350704
-
The rationale for targeting the LOX family in cancer
-
Barker H.E., Cox T.R., Erler J.T. (2012) The rationale for targeting the LOX family in cancer. Nat. Rev. Cancer 12, 540-552.
-
(2012)
Nat. Rev. Cancer
, vol.12
, pp. 540-552
-
-
Barker, H.E.1
Cox, T.R.2
Erler, J.T.3
-
10
-
-
60349120776
-
Genetic diseases of connective tissues: cellular and extracellular effects of ECM mutations
-
Bateman J.F., Boot-Handford R.P., Lamandé S.R. (2009) Genetic diseases of connective tissues: cellular and extracellular effects of ECM mutations. Nat. Rev. Genet. 10, 173-183.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 173-183
-
-
Bateman, J.F.1
Boot-Handford, R.P.2
Lamandé, S.R.3
-
11
-
-
43249096789
-
Preparation of extracellular matrices produced by cultured and primary fibroblasts
-
Beacham D.A., Amatangelo M.D., Cukierman E. (2007) Preparation of extracellular matrices produced by cultured and primary fibroblasts. Curr. Protoc. Cell Biol. 10, 10.
-
(2007)
Curr. Protoc. Cell Biol.
, vol.10
, pp. 10
-
-
Beacham, D.A.1
Amatangelo, M.D.2
Cukierman, E.3
-
12
-
-
33845987491
-
Proteomic analysis of mouse growth plate cartilage
-
Belluoccio D., Wilson R., Thornton D.J., Wallis T.P., Gorman J.J., Bateman J.F. (2006) Proteomic analysis of mouse growth plate cartilage. Proteomics 6, 6549-6553.
-
(2006)
Proteomics
, vol.6
, pp. 6549-6553
-
-
Belluoccio, D.1
Wilson, R.2
Thornton, D.J.3
Wallis, T.P.4
Gorman, J.J.5
Bateman, J.F.6
-
13
-
-
77951844076
-
Establishment of a protein frequency library and its application in the reliable identification of specific protein interaction partners
-
Boulon S., Ahmad Y., Trinkle-Mulcahy L. et al. (2010) Establishment of a protein frequency library and its application in the reliable identification of specific protein interaction partners. Mol. Cell. Proteomics 9, 861-879.
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 861-879
-
-
Boulon, S.1
Ahmad, Y.2
Trinkle-Mulcahy, L.3
-
14
-
-
45949092534
-
Angiotensin II blockade and aortic-root dilation in Marfan's syndrome
-
Brooke B.S., Habashi J.P., Judge D.P., Patel N., Loeys B., Dietz H.C. 3rd (2008) Angiotensin II blockade and aortic-root dilation in Marfan's syndrome. N. Engl. J. Med. 358, 2787-2795.
-
(2008)
N. Engl. J. Med.
, vol.358
, pp. 2787-2795
-
-
Brooke, B.S.1
Habashi, J.P.2
Judge, D.P.3
Patel, N.4
Loeys, B.5
Dietz 3rd, H.C.6
-
15
-
-
82955165779
-
Proteomic analysis of Col11a1-associated protein complexes
-
Brown R.J., Mallory C., McDougal O.M., Oxford J.T. (2011) Proteomic analysis of Col11a1-associated protein complexes. Proteomics 11, 4660-4676.
-
(2011)
Proteomics
, vol.11
, pp. 4660-4676
-
-
Brown, R.J.1
Mallory, C.2
McDougal, O.M.3
Oxford, J.T.4
-
16
-
-
79960114673
-
Decellularized matrix from tumorigenic human mesenchymal stem cells promotes neovascularization with galectin-1 dependent endothelial interaction
-
Burns J.S., Kristiansen M., Kristensen L.P. et al. (2011) Decellularized matrix from tumorigenic human mesenchymal stem cells promotes neovascularization with galectin-1 dependent endothelial interaction. PLoS ONE 6, e21888.
-
(2011)
PLoS ONE
, vol.6
-
-
Burns, J.S.1
Kristiansen, M.2
Kristensen, L.P.3
-
17
-
-
41649105938
-
Large-scale screening for novel low-affinity extracellular protein interactions
-
Bushell K.M., Söllner C., Schuster-Boeckler B., Bateman A., Wright G.J. (2008) Large-scale screening for novel low-affinity extracellular protein interactions. Genome Res. 18, 622-630.
-
(2008)
Genome Res.
, vol.18
, pp. 622-630
-
-
Bushell, K.M.1
Söllner, C.2
Schuster-Boeckler, B.3
Bateman, A.4
Wright, G.J.5
-
18
-
-
79955462727
-
Analyzing the anatomy of integrin adhesions
-
Byron A. (2011) Analyzing the anatomy of integrin adhesions. Sci. Signal. 4, jc3.
-
(2011)
Sci. Signal.
, vol.4
-
-
Byron, A.1
-
20
-
-
79953848376
-
Proteomic analysis of integrin adhesion complexes
-
Byron A., Humphries J.D., Bass M.D., Knight D., Humphries M.J. (2011) Proteomic analysis of integrin adhesion complexes. Sci. Signal. 4, pt2.
-
(2011)
Sci. Signal.
, vol.4
-
-
Byron, A.1
Humphries, J.D.2
Bass, M.D.3
Knight, D.4
Humphries, M.J.5
-
21
-
-
84862675223
-
Alternative cellular roles for proteins identified using proteomics
-
Byron A., Humphries J.D., Humphries M.J. (2012a) Alternative cellular roles for proteins identified using proteomics. J. Proteomics 75, 4184-4185.
-
(2012)
J. Proteomics
, vol.75
, pp. 4184-4185
-
-
Byron, A.1
Humphries, J.D.2
Humphries, M.J.3
-
22
-
-
84862653023
-
Proteomic analysis of α4β1 integrin adhesion complexes reveals α-subunit-dependent protein recruitment
-
Byron A., Humphries J.D., Craig S.E., Knight D., Humphries M.J. (2012b) Proteomic analysis of α4β1 integrin adhesion complexes reveals α-subunit-dependent protein recruitment. Proteomics 12, 2107-2114.
-
(2012)
Proteomics
, vol.12
, pp. 2107-2114
-
-
Byron, A.1
Humphries, J.D.2
Craig, S.E.3
Knight, D.4
Humphries, M.J.5
-
23
-
-
31344458823
-
Proteomic analysis of fibrillin-rich microfibrils
-
Cain S.A., Morgan A., Sherratt M.J., Ball S.G., Shuttleworth C.A., Kielty C.M. (2006) Proteomic analysis of fibrillin-rich microfibrils. Proteomics 6, 111-122.
-
(2006)
Proteomics
, vol.6
, pp. 111-122
-
-
Cain, S.A.1
Morgan, A.2
Sherratt, M.J.3
Ball, S.G.4
Shuttleworth, C.A.5
Kielty, C.M.6
-
24
-
-
75149137810
-
Defining elastic fiber interactions by molecular fishing: an affinity purification and mass spectrometry approach
-
Cain S.A., McGovern A., Small E. et al. (2009) Defining elastic fiber interactions by molecular fishing: an affinity purification and mass spectrometry approach. Mol. Cell. Proteomics 8, 2715-2732.
-
(2009)
Mol. Cell. Proteomics
, vol.8
, pp. 2715-2732
-
-
Cain, S.A.1
McGovern, A.2
Small, E.3
-
25
-
-
61449243886
-
MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions
-
Chautard E., Ballut L., Thierry-Mieg N., Ricard-Blum S. (2009) MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions. Bioinformatics 25, 690-691.
-
(2009)
Bioinformatics
, vol.25
, pp. 690-691
-
-
Chautard, E.1
Ballut, L.2
Thierry-Mieg, N.3
Ricard-Blum, S.4
-
26
-
-
78651301312
-
MatrixDB, the extracellular matrix interaction database
-
Chautard E., Fatoux-Ardore M., Ballut L., Thierry-Mieg N., Ricard-Blum S. (2011) MatrixDB, the extracellular matrix interaction database. Nucleic Acids Res. 39, D235-D240.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Chautard, E.1
Fatoux-Ardore, M.2
Ballut, L.3
Thierry-Mieg, N.4
Ricard-Blum, S.5
-
27
-
-
84860644876
-
Toward a systems level view of the ECM and related proteins: a framework for the systematic definition and analysis of biological systems
-
Cromar G.L., Xiong X., Chautard E., Ricard-Blum S., Parkinson J. (2012) Toward a systems level view of the ECM and related proteins: a framework for the systematic definition and analysis of biological systems. Proteins 80, 1522-1544.
-
(2012)
Proteins
, vol.80
, pp. 1522-1544
-
-
Cromar, G.L.1
Xiong, X.2
Chautard, E.3
Ricard-Blum, S.4
Parkinson, J.5
-
28
-
-
0035941075
-
Taking cell-matrix adhesions to the third dimension
-
Cukierman E., Pankov R., Stevens D.R., Yamada K.M. (2001) Taking cell-matrix adhesions to the third dimension. Science 294, 1708-1712.
-
(2001)
Science
, vol.294
, pp. 1708-1712
-
-
Cukierman, E.1
Pankov, R.2
Stevens, D.R.3
Yamada, K.M.4
-
29
-
-
84859011467
-
Hyperplexing: a method for higher-order multiplexed quantitative proteomics provides a map of the dynamic response to rapamycin in yeast
-
Dephoure N. & Gygi S.P. (2012) Hyperplexing: a method for higher-order multiplexed quantitative proteomics provides a map of the dynamic response to rapamycin in yeast. Sci. Signal. 5, rs2.
-
(2012)
Sci. Signal.
, vol.5
-
-
Dephoure, N.1
Gygi, S.P.2
-
30
-
-
77956496368
-
Proteomics characterization of extracellular space components in the human aorta
-
Didangelos A., Yin X., Mandal K., Baumert M., Jahangiri M., Mayr M. (2010) Proteomics characterization of extracellular space components in the human aorta. Mol. Cell. Proteomics 9, 2048-2062.
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 2048-2062
-
-
Didangelos, A.1
Yin, X.2
Mandal, K.3
Baumert, M.4
Jahangiri, M.5
Mayr, M.6
-
31
-
-
80051661224
-
Extracellular matrix composition and remodeling in human abdominal aortic aneurysms: a proteomics approach
-
Didangelos A., Yin X., Mandal K. et al. (2011) Extracellular matrix composition and remodeling in human abdominal aortic aneurysms: a proteomics approach. Mol. Cell. Proteomics 10, M111.008128.
-
(2011)
Mol. Cell. Proteomics
, vol.10
-
-
Didangelos, A.1
Yin, X.2
Mandal, K.3
-
32
-
-
61449181308
-
One-dimensional topography underlies three-dimensional fibrillar cell migration
-
Doyle A.D., Wang F.W., Matsumoto K., Yamada K.M. (2009) One-dimensional topography underlies three-dimensional fibrillar cell migration. J. Cell Biol. 184, 481-490.
-
(2009)
J. Cell Biol.
, vol.184
, pp. 481-490
-
-
Doyle, A.D.1
Wang, F.W.2
Matsumoto, K.3
Yamada, K.M.4
-
33
-
-
79955441991
-
Balancing forces: architectural control of mechanotransduction
-
DuFort C.C., Paszek M.J., Weaver V.M. (2011) Balancing forces: architectural control of mechanotransduction. Nat. Rev. Mol. Cell Biol. 12, 308-319.
-
(2011)
Nat. Rev. Mol. Cell Biol.
, vol.12
, pp. 308-319
-
-
DuFort, C.C.1
Paszek, M.J.2
Weaver, V.M.3
-
34
-
-
79958284636
-
Role of YAP/TAZ in mechanotransduction
-
Dupont S., Morsut L., Aragona M. et al. (2011) Role of YAP/TAZ in mechanotransduction. Nature 474, 179-183.
-
(2011)
Nature
, vol.474
, pp. 179-183
-
-
Dupont, S.1
Morsut, L.2
Aragona, M.3
-
35
-
-
33747152561
-
Matrix elasticity directs stem cell lineage specification
-
Engler A.J., Sen S., Sweeney H.L., Discher D.E. (2006) Matrix elasticity directs stem cell lineage specification. Cell 126, 677-689.
-
(2006)
Cell
, vol.126
, pp. 677-689
-
-
Engler, A.J.1
Sen, S.2
Sweeney, H.L.3
Discher, D.E.4
-
36
-
-
69249113013
-
The first draft of the endostatin interaction network
-
Faye C., Chautard E., Olsen B.R., Ricard-Blum S. (2009) The first draft of the endostatin interaction network. J. Biol. Chem. 284, 22041-22047.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 22041-22047
-
-
Faye, C.1
Chautard, E.2
Olsen, B.R.3
Ricard-Blum, S.4
-
38
-
-
38949106692
-
Novel mutations in exon 2 of MATN3 affect residues within the alpha-helices of the A-domain and can result in the intracellular retention of mutant matrilin-3
-
Fresquet M., Jackson G.C., Loughlin J., Briggs M.D. (2008) Novel mutations in exon 2 of MATN3 affect residues within the alpha-helices of the A-domain and can result in the intracellular retention of mutant matrilin-3. Hum. Mutat. 29, 330.
-
(2008)
Hum. Mutat.
, vol.29
, pp. 330
-
-
Fresquet, M.1
Jackson, G.C.2
Loughlin, J.3
Briggs, M.D.4
-
39
-
-
33847340190
-
Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ)
-
Gan C.S., Chong P.K., Pham T.K., Wright P.C. (2007) Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ). J. Proteome Res. 6, 821-827.
-
(2007)
J. Proteome Res.
, vol.6
, pp. 821-827
-
-
Gan, C.S.1
Chong, P.K.2
Pham, T.K.3
Wright, P.C.4
-
40
-
-
33749989266
-
Protein profile of osteoarthritic human articular cartilage using tandem mass spectrometry
-
Garcia B.A., Platt M.D., Born T.L., Shabanowitz J., Marcus N.A., Hunt D.F. (2006) Protein profile of osteoarthritic human articular cartilage using tandem mass spectrometry. Rapid Commun. Mass Spectrom. 20, 2999-3006.
-
(2006)
Rapid Commun. Mass Spectrom.
, vol.20
, pp. 2999-3006
-
-
Garcia, B.A.1
Platt, M.D.2
Born, T.L.3
Shabanowitz, J.4
Marcus, N.A.5
Hunt, D.F.6
-
41
-
-
84859699831
-
The Gene Ontology: enhancements for 2011
-
Gene Ontology Consortium.
-
Gene Ontology Consortium. (2012) The Gene Ontology: enhancements for 2011. Nucleic Acids Res. 40, D559-D564.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
-
42
-
-
77956123956
-
Substrate elasticity regulates skeletal muscle stem cell self-renewal in culture
-
Gilbert P.M., Havenstrite K.L., Magnusson K.E. et al. (2010) Substrate elasticity regulates skeletal muscle stem cell self-renewal in culture. Science 329, 1078-1081.
-
(2010)
Science
, vol.329
, pp. 1078-1081
-
-
Gilbert, P.M.1
Havenstrite, K.L.2
Magnusson, K.E.3
-
43
-
-
74049132731
-
Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis
-
Griffin N.M., Yu J., Long F. et al. (2010) Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis. Nat. Biotechnol. 28, 83-89.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 83-89
-
-
Griffin, N.M.1
Yu, J.2
Long, F.3
-
44
-
-
33645672459
-
Losartan, an AT1 antagonist, prevents aortic aneurysm in a mouse model of Marfan syndrome
-
Habashi J.P., Judge D.P., Holm T.M. et al. (2006) Losartan, an AT1 antagonist, prevents aortic aneurysm in a mouse model of Marfan syndrome. Science 312, 117-121.
-
(2006)
Science
, vol.312
, pp. 117-121
-
-
Habashi, J.P.1
Judge, D.P.2
Holm, T.M.3
-
45
-
-
13444266370
-
Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
-
Hamosh A., Scott A.F., Amberger J.S., Bocchini C.A., McKusick V.A. (2005) Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders. Nucleic Acids Res. 33, D514-D517.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Hamosh, A.1
Scott, A.F.2
Amberger, J.S.3
Bocchini, C.A.4
McKusick, V.A.5
-
47
-
-
79960010160
-
PeaksPTM: mass spectrometry-based identification of peptides with unspecified modifications
-
Han X., He L., Xin L., Shan B., Ma B. (2011) PeaksPTM: mass spectrometry-based identification of peptides with unspecified modifications. J. Proteome Res. 10, 2930-2936.
-
(2011)
J. Proteome Res.
, vol.10
, pp. 2930-2936
-
-
Han, X.1
He, L.2
Xin, L.3
Shan, B.4
Ma, B.5
-
48
-
-
71049119341
-
An in-solution ultrasonication-assisted digestion method for improved extracellular matrix proteome coverage
-
Hansen K.C., Kiemele L., Maller O. et al. (2009) An in-solution ultrasonication-assisted digestion method for improved extracellular matrix proteome coverage. Mol. Cell. Proteomics 8, 1648-1657.
-
(2009)
Mol. Cell. Proteomics
, vol.8
, pp. 1648-1657
-
-
Hansen, K.C.1
Kiemele, L.2
Maller, O.3
-
49
-
-
84858711532
-
Current and future pharmacological treatment strategies with regard to aortic disease in Marfan syndrome
-
Hartog A.W., Franken R., Zwinderman A.H., Groenink M., Mulder B.J. (2012) Current and future pharmacological treatment strategies with regard to aortic disease in Marfan syndrome. Expert Opin. Pharmacother. 13, 647-662.
-
(2012)
Expert Opin. Pharmacother.
, vol.13
, pp. 647-662
-
-
Hartog, A.W.1
Franken, R.2
Zwinderman, A.H.3
Groenink, M.4
Mulder, B.J.5
-
50
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da W., Sherman B.T., Lempicki R.A. (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4, 44-57.
-
(2009)
Nat. Protoc.
, vol.4
, pp. 44-57
-
-
Huang da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
51
-
-
80053994879
-
Proteomic analysis of extracellular matrices used in stem cell culture
-
Hughes C.S., Radan L., Betts D., Postovit L.M., Lajoie G.A. (2011) Proteomic analysis of extracellular matrices used in stem cell culture. Proteomics 11, 3983-3991.
-
(2011)
Proteomics
, vol.11
, pp. 3983-3991
-
-
Hughes, C.S.1
Radan, L.2
Betts, D.3
Postovit, L.M.4
Lajoie, G.A.5
-
53
-
-
77951153298
-
Proteomic analysis of integrin-associated complexes identifies RCC2 as a dual regulator of Rac1 and Arf6
-
Humphries J.D., Byron A., Bass M.D. et al. (2009) Proteomic analysis of integrin-associated complexes identifies RCC2 as a dual regulator of Rac1 and Arf6. Sci. Signal. 2, ra51.
-
(2009)
Sci. Signal.
, vol.2
-
-
Humphries, J.D.1
Byron, A.2
Bass, M.D.3
-
54
-
-
70849099495
-
The extracellular matrix: not just pretty fibrils
-
Hynes R.O. (2009) The extracellular matrix: not just pretty fibrils. Science 326, 1216-1219.
-
(2009)
Science
, vol.326
, pp. 1216-1219
-
-
Hynes, R.O.1
-
55
-
-
84860293184
-
Evolution: the evolution of metazoan extracellular matrix
-
Hynes R.O. (2012) Evolution: the evolution of metazoan extracellular matrix. J. Cell Biol. 196, 671-679.
-
(2012)
J. Cell Biol.
, vol.196
, pp. 671-679
-
-
Hynes, R.O.1
-
56
-
-
26844559000
-
Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein
-
Ishihama Y., Oda Y., Tabata T. et al. (2005) Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein. Mol. Cell. Proteomics 4, 1265-1272.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1265-1272
-
-
Ishihama, Y.1
Oda, Y.2
Tabata, T.3
-
57
-
-
26844438450
-
Impact of replicate types on proteomic expression analysis
-
Karp N.A., Spencer M., Lindsay H., O'Dell K., Lilley K.S. (2005) Impact of replicate types on proteomic expression analysis. J. Proteome Res. 4, 1867-1871.
-
(2005)
J. Proteome Res.
, vol.4
, pp. 1867-1871
-
-
Karp, N.A.1
Spencer, M.2
Lindsay, H.3
O'Dell, K.4
Lilley, K.S.5
-
58
-
-
58149529356
-
Tracheobronchial air-liquid interface cell culture: a model for innate mucosal defense of the upper airways?
-
Kesimer M., Kirkham S., Pickles R.J. et al. (2009) Tracheobronchial air-liquid interface cell culture: a model for innate mucosal defense of the upper airways? Am. J. Physiol. Lung Cell. Mol. Physiol. 296, L92-L100.
-
(2009)
Am. J. Physiol. Lung Cell. Mol. Physiol.
, vol.296
-
-
Kesimer, M.1
Kirkham, S.2
Pickles, R.J.3
-
59
-
-
52649104987
-
Fibrillin-1 microfibril deposition is dependent on fibronectin assembly
-
Kinsey R., Williamson M.R., Chaudhry S. et al. (2008) Fibrillin-1 microfibril deposition is dependent on fibronectin assembly. J. Cell Sci. 121, 2696-2704.
-
(2008)
J. Cell Sci.
, vol.121
, pp. 2696-2704
-
-
Kinsey, R.1
Williamson, M.R.2
Chaudhry, S.3
-
60
-
-
79953303384
-
Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for β-Pix in negative regulation of focal adhesion maturation
-
Kuo J.C., Han X., Hsiao C.T., Yates J.R. 3rd, Waterman C.M. (2011) Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for β-Pix in negative regulation of focal adhesion maturation. Nat. Cell Biol. 13, 383-393.
-
(2011)
Nat. Cell Biol.
, vol.13
, pp. 383-393
-
-
Kuo, J.C.1
Han, X.2
Hsiao, C.T.3
Yates 3rd, J.R.4
Waterman, C.M.5
-
61
-
-
79959826381
-
Extracellular matrix dynamics in hepatocarcinogenesis: a comparative proteomics study of PDGFC transgenic and Pten null mouse models
-
Lai K.K., Shang S., Lohia N. et al. (2011) Extracellular matrix dynamics in hepatocarcinogenesis: a comparative proteomics study of PDGFC transgenic and Pten null mouse models. PLoS Genet. 7, e1002147.
-
(2011)
PLoS Genet.
, vol.7
-
-
Lai, K.K.1
Shang, S.2
Lohia, N.3
-
62
-
-
0028902639
-
Endoplasmic reticulum-mediated quality control of type I collagen production by cells from osteogenesis imperfecta patients with mutations in the pro alpha 1 (I) chain carboxyl-terminal propeptide which impair subunit assembly
-
Lamandé S.R., Chessler S.D., Golub S.B. et al. (1995) Endoplasmic reticulum-mediated quality control of type I collagen production by cells from osteogenesis imperfecta patients with mutations in the pro alpha 1 (I) chain carboxyl-terminal propeptide which impair subunit assembly. J. Biol. Chem. 270, 8642-8649.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 8642-8649
-
-
Lamandé, S.R.1
Chessler, S.D.2
Golub, S.B.3
-
63
-
-
33745936539
-
Proteomic analysis of cartilage- and bone-associated samples
-
Lammi M.J., Häyrinen J., Mahonen A. (2006) Proteomic analysis of cartilage- and bone-associated samples. Electrophoresis 27, 2687-2701.
-
(2006)
Electrophoresis
, vol.27
, pp. 2687-2701
-
-
Lammi, M.J.1
Häyrinen, J.2
Mahonen, A.3
-
64
-
-
84859238559
-
The vitreous glycoprotein opticin inhibits preretinal neovascularization
-
Le Goff M.M., Lu H., Ugarte M. et al. (2012a) The vitreous glycoprotein opticin inhibits preretinal neovascularization. Invest. Ophthalmol. Vis. Sci. 53, 228-234.
-
(2012)
Invest. Ophthalmol. Vis. Sci.
, vol.53
, pp. 228-234
-
-
Le Goff, M.M.1
Lu, H.2
Ugarte, M.3
-
65
-
-
84865020080
-
Opticin exerts its anti-angiogenic activity by regulating extracellular matrix adhesiveness
-
Le Goff M.M., Sutton M.J., Slevin M., Latif A., Humphries M.J., Bishop P.N. (2012b) Opticin exerts its anti-angiogenic activity by regulating extracellular matrix adhesiveness. J. Biol. Chem. 287, 28027-28036.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 28027-28036
-
-
Le Goff, M.M.1
Sutton, M.J.2
Slevin, M.3
Latif, A.4
Humphries, M.J.5
Bishop, P.N.6
-
66
-
-
70450222098
-
Matrix crosslinking forces tumor progression by enhancing integrin signaling
-
Levental K.R., Yu H., Kass L. et al. (2009) Matrix crosslinking forces tumor progression by enhancing integrin signaling. Cell 139, 891-906.
-
(2009)
Cell
, vol.139
, pp. 891-906
-
-
Levental, K.R.1
Yu, H.2
Kass, L.3
-
67
-
-
84860843234
-
Using extracellular matrix proteomics to understand left ventricular remodeling
-
Lindsey M.L., Weintraub S.T., Lange R.A. (2012) Using extracellular matrix proteomics to understand left ventricular remodeling. Circ. Cardiovasc. Genet. 5, o1-o7.
-
(2012)
Circ. Cardiovasc. Genet.
, vol.5
-
-
Lindsey, M.L.1
Weintraub, S.T.2
Lange, R.A.3
-
68
-
-
3242731195
-
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
-
Liu H., Sadygov R.G., Yates J.R. 3rd (2004) A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal. Chem. 76, 4193-4201.
-
(2004)
Anal. Chem.
, vol.76
, pp. 4193-4201
-
-
Liu, H.1
Sadygov, R.G.2
Yates 3rd, J.R.3
-
69
-
-
84859949610
-
The extracellular matrix: a dynamic niche in cancer progression
-
Lu P., Weaver V.M., Werb Z. (2012) The extracellular matrix: a dynamic niche in cancer progression. J. Cell Biol. 196, 395-406.
-
(2012)
J. Cell Biol.
, vol.196
, pp. 395-406
-
-
Lu, P.1
Weaver, V.M.2
Werb, Z.3
-
70
-
-
80052499480
-
Postpartum mammary gland involution drives progression of ductal carcinoma in situ through collagen and COX-2
-
Lyons T.R., O'Brien J., Borges V.F. et al. (2011) Postpartum mammary gland involution drives progression of ductal carcinoma in situ through collagen and COX-2. Nat. Med. 17, 1109-1115.
-
(2011)
Nat. Med.
, vol.17
, pp. 1109-1115
-
-
Lyons, T.R.1
O'Brien, J.2
Borges, V.F.3
-
71
-
-
77954464041
-
Proteomics: a pragmatic perspective
-
Mallick P. & Kuster B. (2010) Proteomics: a pragmatic perspective. Nat. Biotechnol. 28, 695-709.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 695-709
-
-
Mallick, P.1
Kuster, B.2
-
72
-
-
78650105547
-
Construction of a large extracellular protein interaction network and its resolution by spatiotemporal expression profiling
-
Martin S., Söllner C., Charoensawan V. et al. (2010) Construction of a large extracellular protein interaction network and its resolution by spatiotemporal expression profiling. Mol. Cell. Proteomics 9, 2654-2665.
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 2654-2665
-
-
Martin, S.1
Söllner, C.2
Charoensawan, V.3
-
73
-
-
70349335653
-
Matrix metalloproteinase proteomics: substrates, targets, and therapy
-
Morrison C.J., Butler G.S., Rodríguez D., Overall C.M. (2009) Matrix metalloproteinase proteomics: substrates, targets, and therapy. Curr. Opin. Cell Biol. 21, 645-653.
-
(2009)
Curr. Opin. Cell Biol.
, vol.21
, pp. 645-653
-
-
Morrison, C.J.1
Butler, G.S.2
Rodríguez, D.3
Overall, C.M.4
-
74
-
-
0347418197
-
Collagens, modifying enzymes and their mutations in humans, flies and worms
-
Myllyharju J. & Kivirikko K.I. (2004) Collagens, modifying enzymes and their mutations in humans, flies and worms. Trends Genet. 20, 33-43.
-
(2004)
Trends Genet.
, vol.20
, pp. 33-43
-
-
Myllyharju, J.1
Kivirikko, K.I.2
-
75
-
-
84859823928
-
The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices
-
Naba A., Clauser K.R., Hoersch S., Liu H., Carr S.A., Hynes R.O. (2012) The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices. Mol. Cell. Proteomics 11, M111.014647.
-
(2012)
Mol. Cell. Proteomics
, vol.11
-
-
Naba, A.1
Clauser, K.R.2
Hoersch, S.3
Liu, H.4
Carr, S.A.5
Hynes, R.O.6
-
76
-
-
84862660561
-
Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments
-
Nesvizhskii A.I. (2012) Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments. Proteomics 12, 1639-1655.
-
(2012)
Proteomics
, vol.12
, pp. 1639-1655
-
-
Nesvizhskii, A.I.1
-
77
-
-
35848929694
-
Analysis and validation of proteomic data generated by tandem mass spectrometry
-
Nesvizhskii A.I., Vitek O., Aebersold R. (2007) Analysis and validation of proteomic data generated by tandem mass spectrometry. Nat. Methods 4, 787-797.
-
(2007)
Nat. Methods
, vol.4
, pp. 787-797
-
-
Nesvizhskii, A.I.1
Vitek, O.2
Aebersold, R.3
-
78
-
-
33747780497
-
Shotgun proteomic analysis of human-induced sputum
-
Nicholas B., Skipp P., Mould R. et al. (2006) Shotgun proteomic analysis of human-induced sputum. Proteomics 6, 4390-4401.
-
(2006)
Proteomics
, vol.6
, pp. 4390-4401
-
-
Nicholas, B.1
Skipp, P.2
Mould, R.3
-
79
-
-
78149468680
-
An unfolded protein response is the initial cellular response to the expression of mutant matrilin-3 in a mouse model of multiple epiphyseal dysplasia
-
Nundlall S., Rajpar M.H., Bell P.A. et al. (2010) An unfolded protein response is the initial cellular response to the expression of mutant matrilin-3 in a mouse model of multiple epiphyseal dysplasia. Cell Stress Chaperones 15, 835-849.
-
(2010)
Cell Stress Chaperones
, vol.15
, pp. 835-849
-
-
Nundlall, S.1
Rajpar, M.H.2
Bell, P.A.3
-
80
-
-
84867444588
-
Rat mammary extracellular matrix composition and response to ibuprofen treatment during postpartum involution by differential GeLC-MS/MS analysis
-
O'Brien J.H., Vanderlinden L.A., Schedin P.J., Hansen K.C. (2012) Rat mammary extracellular matrix composition and response to ibuprofen treatment during postpartum involution by differential GeLC-MS/MS analysis. J. Proteome Res. 11, 4894-4905.
-
(2012)
J. Proteome Res.
, vol.11
, pp. 4894-4905
-
-
O'Brien, J.H.1
Vanderlinden, L.A.2
Schedin, P.J.3
Hansen, K.C.4
-
81
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
Ong S.E., Blagoev B., Kratchmarova I. et al. (2002) Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol. Cell. Proteomics 1, 376-386.
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
-
82
-
-
84861749409
-
Quantitative proteomic analysis of eight cartilaginous tissues reveals characteristic differences as well as similarities between subgroups
-
Önnerfjord P., Khabut A., Reinholt F.P., Svensson O., Heinegård D. (2012) Quantitative proteomic analysis of eight cartilaginous tissues reveals characteristic differences as well as similarities between subgroups. J. Biol. Chem. 287, 18913-18924.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 18913-18924
-
-
Önnerfjord, P.1
Khabut, A.2
Reinholt, F.P.3
Svensson, O.4
Heinegård, D.5
-
83
-
-
79957592466
-
A systems biology approach for the investigation of the heparin/heparan sulfate interactome
-
Ori A., Wilkinson M.C., Fernig D.G. (2011) A systems biology approach for the investigation of the heparin/heparan sulfate interactome. J. Biol. Chem. 286, 19892-19904.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 19892-19904
-
-
Ori, A.1
Wilkinson, M.C.2
Fernig, D.G.3
-
84
-
-
78650463903
-
The evolution of extracellular matrix
-
Özbek S., Balasubramanian P.G., Chiquet-Ehrismann R., Tucker R.P., Adams J.C. (2010) The evolution of extracellular matrix. Mol. Biol. Cell 21, 4300-4305.
-
(2010)
Mol. Biol. Cell
, vol.21
, pp. 4300-4305
-
-
Özbek, S.1
Balasubramanian, P.G.2
Chiquet-Ehrismann, R.3
Tucker, R.P.4
Adams, J.C.5
-
85
-
-
33847195428
-
Matrix metalloproteinases and the regulation of tissue remodelling
-
Page-McCaw A., Ewald A.J., Werb Z. (2007) Matrix metalloproteinases and the regulation of tissue remodelling. Nat. Rev. Mol. Cell Biol. 8, 221-233.
-
(2007)
Nat. Rev. Mol. Cell Biol.
, vol.8
, pp. 221-233
-
-
Page-McCaw, A.1
Ewald, A.J.2
Werb, Z.3
-
86
-
-
59449101794
-
The protein interaction network of the epithelial junctional complex: a system-level analysis
-
Paris L. & Bazzoni G. (2008) The protein interaction network of the epithelial junctional complex: a system-level analysis. Mol. Biol. Cell 19, 5409-5421.
-
(2008)
Mol. Biol. Cell
, vol.19
, pp. 5409-5421
-
-
Paris, L.1
Bazzoni, G.2
-
87
-
-
36049028753
-
A quantitative and qualitative method for direct 2-DE analysis of murine cartilage
-
Pecora F., Forlino A., Gualeni B. et al. (2007) A quantitative and qualitative method for direct 2-DE analysis of murine cartilage. Proteomics 7, 4003-4007.
-
(2007)
Proteomics
, vol.7
, pp. 4003-4007
-
-
Pecora, F.1
Forlino, A.2
Gualeni, B.3
-
88
-
-
0344912596
-
Cell locomotion and focal adhesions are regulated by substrate flexibility
-
Pelham R.J. Jr & Wang Y. (1997) Cell locomotion and focal adhesions are regulated by substrate flexibility. Proc. Natl Acad. Sci. USA 94, 13661-13665.
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 13661-13665
-
-
Pelham Jr., R.J.1
Wang, Y.2
-
89
-
-
33751103918
-
Comparative proteomic analysis of extracellular matrix proteins secreted by two types of skin fibroblasts
-
Pflieger D., Chabane S., Gaillard O. et al. (2006) Comparative proteomic analysis of extracellular matrix proteins secreted by two types of skin fibroblasts. Proteomics 6, 5868-5879.
-
(2006)
Proteomics
, vol.6
, pp. 5868-5879
-
-
Pflieger, D.1
Chabane, S.2
Gaillard, O.3
-
90
-
-
77949519484
-
On the beta-binomial model for analysis of spectral count data in label-free tandem mass spectrometry-based proteomics
-
Pham T.V., Piersma S.R., Warmoes M., Jimenez C.R. (2010) On the beta-binomial model for analysis of spectral count data in label-free tandem mass spectrometry-based proteomics. Bioinformatics 26, 363-369.
-
(2010)
Bioinformatics
, vol.26
, pp. 363-369
-
-
Pham, T.V.1
Piersma, S.R.2
Warmoes, M.3
Jimenez, C.R.4
-
91
-
-
34548453097
-
Reduced cell proliferation and increased apoptosis are significant pathological mechanisms in a murine model of mild pseudoachondroplasia resulting from a mutation in the C-terminal domain of COMP
-
Piróg-Garcia K.A., Meadows R.S., Knowles L. et al. (2007) Reduced cell proliferation and increased apoptosis are significant pathological mechanisms in a murine model of mild pseudoachondroplasia resulting from a mutation in the C-terminal domain of COMP. Hum. Mol. Genet. 16, 2072-2088.
-
(2007)
Hum. Mol. Genet.
, vol.16
, pp. 2072-2088
-
-
Piróg-Garcia, K.A.1
Meadows, R.S.2
Knowles, L.3
-
92
-
-
73349112261
-
Targeted induction of endoplasmic reticulum stress induces cartilage pathology
-
Rajpar M.H., McDermott B., Kung L. et al. (2009) Targeted induction of endoplasmic reticulum stress induces cartilage pathology. PLoS Genet. 5, e1000691.
-
(2009)
PLoS Genet.
, vol.5
-
-
Rajpar, M.H.1
McDermott, B.2
Kung, L.3
-
93
-
-
84864591367
-
Proteomic analysis of extracellular matrix from the hepatic stellate cell line LX-2 identifies CYR61 and Wnt-5a as novel constituents of fibrotic liver
-
Rashid S.T., Humphries J.D., Byron A. et al. (2012) Proteomic analysis of extracellular matrix from the hepatic stellate cell line LX-2 identifies CYR61 and Wnt-5a as novel constituents of fibrotic liver. J. Proteome Res. 11, 4052-4064.
-
(2012)
J. Proteome Res.
, vol.11
, pp. 4052-4064
-
-
Rashid, S.T.1
Humphries, J.D.2
Byron, A.3
-
94
-
-
0034695439
-
Identification in vitreous and molecular cloning of opticin, a novel member of the family of leucine-rich repeat proteins of the extracellular matrix
-
Reardon A.J., Le Goff M., Briggs M.D. et al. (2000) Identification in vitreous and molecular cloning of opticin, a novel member of the family of leucine-rich repeat proteins of the extracellular matrix. J. Biol. Chem. 275, 2123-2129.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 2123-2129
-
-
Reardon, A.J.1
Le Goff, M.2
Briggs, M.D.3
-
95
-
-
13844276803
-
Prefractionation techniques in proteome analysis: the mining tools of the third millennium
-
Righetti P.G., Castagna A., Antonioli P., Boschetti E. (2005) Prefractionation techniques in proteome analysis: the mining tools of the third millennium. Electrophoresis 26, 297-319.
-
(2005)
Electrophoresis
, vol.26
, pp. 297-319
-
-
Righetti, P.G.1
Castagna, A.2
Antonioli, P.3
Boschetti, E.4
-
96
-
-
33947182552
-
An integrated mass spectrometric and computational framework for the analysis of protein interaction networks
-
Rinner O., Mueller L.N., Hubálek M., Müller M., Gstaiger M., Aebersold R. (2007) An integrated mass spectrometric and computational framework for the analysis of protein interaction networks. Nat. Biotechnol. 25, 345-352.
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 345-352
-
-
Rinner, O.1
Mueller, L.N.2
Hubálek, M.3
Müller, M.4
Gstaiger, M.5
Aebersold, R.6
-
97
-
-
19944432197
-
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
-
Ross P.L., Huang Y.N., Marchese J.N. et al. (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol. Cell. Proteomics 3, 1154-1169.
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 1154-1169
-
-
Ross, P.L.1
Huang, Y.N.2
Marchese, J.N.3
-
98
-
-
79952283069
-
Quantitative proteomics of the integrin adhesome show a myosin II-dependent recruitment of LIM domain proteins
-
Schiller H.B., Friedel C.C., Boulegue C., Fässler R. (2011) Quantitative proteomics of the integrin adhesome show a myosin II-dependent recruitment of LIM domain proteins. EMBO Rep. 12, 259-266.
-
(2011)
EMBO Rep.
, vol.12
, pp. 259-266
-
-
Schiller, H.B.1
Friedel, C.C.2
Boulegue, C.3
Fässler, R.4
-
99
-
-
34247889970
-
A proteomic analysis of adult rat bone reveals the presence of cartilage/chondrocyte markers
-
Schreiweis M.A., Butler J.P., Kulkarni N.H. et al. (2007) A proteomic analysis of adult rat bone reveals the presence of cartilage/chondrocyte markers. J. Cell. Biochem. 101, 466-476.
-
(2007)
J. Cell. Biochem.
, vol.101
, pp. 466-476
-
-
Schreiweis, M.A.1
Butler, J.P.2
Kulkarni, N.H.3
-
100
-
-
84856387903
-
Identification of osteopontin as a novel marker for early hepatocellular carcinoma
-
Shang S., Plymoth A., Ge S. et al. (2012) Identification of osteopontin as a novel marker for early hepatocellular carcinoma. Hepatology 55, 483-490.
-
(2012)
Hepatology
, vol.55
, pp. 483-490
-
-
Shang, S.1
Plymoth, A.2
Ge, S.3
-
101
-
-
0242490780
-
Cytoscape: a software environment for integrated models of biomolecular interaction networks
-
Shannon P., Markiel A., Ozier O. et al. (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 13, 2498-2504.
-
(2003)
Genome Res.
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
-
102
-
-
34848889259
-
The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra
-
Shilov I.V., Seymour S.L., Patel A.A. et al. (2007) The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra. Mol. Cell. Proteomics 6, 1638-1655.
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 1638-1655
-
-
Shilov, I.V.1
Seymour, S.L.2
Patel, A.A.3
-
103
-
-
20144388265
-
Quantitative proteomic analysis by accurate mass retention time pairs
-
Silva J.C., Denny R., Dorschel C.A. et al. (2005) Quantitative proteomic analysis by accurate mass retention time pairs. Anal. Chem. 77, 2187-2200.
-
(2005)
Anal. Chem.
, vol.77
, pp. 2187-2200
-
-
Silva, J.C.1
Denny, R.2
Dorschel, C.A.3
-
105
-
-
77957221743
-
The impact of the extracellular matrix on inflammation
-
Sorokin L. (2010) The impact of the extracellular matrix on inflammation. Nat. Rev. Immunol. 10, 712-723.
-
(2010)
Nat. Rev. Immunol.
, vol.10
, pp. 712-723
-
-
Sorokin, L.1
-
106
-
-
0036796746
-
Fibronectin polymerization regulates the composition and stability of extracellular matrix fibrils and cell-matrix adhesions
-
Sottile J. & Hocking D.C. (2002) Fibronectin polymerization regulates the composition and stability of extracellular matrix fibrils and cell-matrix adhesions. Mol. Biol. Cell 13, 3546-3559.
-
(2002)
Mol. Biol. Cell
, vol.13
, pp. 3546-3559
-
-
Sottile, J.1
Hocking, D.C.2
-
107
-
-
27544511899
-
InsPecT: identification of posttranslationally modified peptides from tandem mass spectra
-
Tanner S., Shu H., Frank A. et al. (2005) InsPecT: identification of posttranslationally modified peptides from tandem mass spectra. Anal. Chem. 77, 4626-4639.
-
(2005)
Anal. Chem.
, vol.77
, pp. 4626-4639
-
-
Tanner, S.1
Shu, H.2
Frank, A.3
-
108
-
-
76649141721
-
Detection of differentially expressed basal cell proteins by mass spectrometry
-
Todorović V., Desai B.V., Eigenheer R.A. et al. (2010) Detection of differentially expressed basal cell proteins by mass spectrometry. Mol. Cell. Proteomics 9, 351-361.
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 351-361
-
-
Todorović, V.1
Desai, B.V.2
Eigenheer, R.A.3
-
109
-
-
55949116385
-
Identifying specific protein interaction partners using quantitative mass spectrometry and bead proteomes
-
Trinkle-Mulcahy L., Boulon S., Lam Y.W. et al. (2008) Identifying specific protein interaction partners using quantitative mass spectrometry and bead proteomes. J. Cell Biol. 183, 223-239.
-
(2008)
J. Cell Biol.
, vol.183
, pp. 223-239
-
-
Trinkle-Mulcahy, L.1
Boulon, S.2
Lam, Y.W.3
-
110
-
-
84856915092
-
Novel molecular therapies for heritable skin disorders
-
Uitto J., Christiano A.M., McLean W.H., McGrath J.A. (2012) Novel molecular therapies for heritable skin disorders. J. Invest. Dermatol. 132, 820-828.
-
(2012)
J. Invest. Dermatol.
, vol.132
, pp. 820-828
-
-
Uitto, J.1
Christiano, A.M.2
McLean, W.H.3
McGrath, J.A.4
-
111
-
-
84860833500
-
Reorganizing the protein space at the Universal Protein Resource (UniProt)
-
UniProt Consortium.
-
UniProt Consortium. (2012) Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic Acids Res. 40, D71-D75.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
-
112
-
-
69949177973
-
A sulfilimine bond identified in collagen IV
-
Vanacore R., Ham A.J., Voehler M. et al. (2009) A sulfilimine bond identified in collagen IV. Science 325, 1230-1234.
-
(2009)
Science
, vol.325
, pp. 1230-1234
-
-
Vanacore, R.1
Ham, A.J.2
Voehler, M.3
-
113
-
-
33750699271
-
Establishment of a reliable method for direct proteome characterization of human articular cartilage
-
Vincourt J.B., Lionneton F., Kratassiouk G. et al. (2006) Establishment of a reliable method for direct proteome characterization of human articular cartilage. Mol. Cell. Proteomics 5, 1984-1995.
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 1984-1995
-
-
Vincourt, J.B.1
Lionneton, F.2
Kratassiouk, G.3
-
114
-
-
78650437848
-
The extracellular matrix: an underexplored but important proteome
-
Wilson R. (2010) The extracellular matrix: an underexplored but important proteome. Expert Rev. Proteomics 7, 803-806.
-
(2010)
Expert Rev. Proteomics
, vol.7
, pp. 803-806
-
-
Wilson, R.1
-
115
-
-
54949112056
-
Proteomic characterization of mouse cartilage degradation in vitro
-
Wilson R., Belluoccio D., Little C.B., Fosang A.J., Bateman J.F. (2008) Proteomic characterization of mouse cartilage degradation in vitro. Arthritis Rheum. 58, 3120-3131.
-
(2008)
Arthritis Rheum.
, vol.58
, pp. 3120-3131
-
-
Wilson, R.1
Belluoccio, D.2
Little, C.B.3
Fosang, A.J.4
Bateman, J.F.5
-
116
-
-
77953166986
-
Comprehensive profiling of cartilage extracellular matrix formation and maturation using sequential extraction and label-free quantitative proteomics
-
Wilson R., Diseberg A.F., Gordon L. et al. (2010) Comprehensive profiling of cartilage extracellular matrix formation and maturation using sequential extraction and label-free quantitative proteomics. Mol. Cell. Proteomics 9, 1296-1313.
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 1296-1313
-
-
Wilson, R.1
Diseberg, A.F.2
Gordon, L.3
-
117
-
-
84863395950
-
Changes in the chondrocyte and extracellular matrix proteome during post-natal mouse cartilage development
-
Wilson R., Norris E.L., Brachvogel B. et al. (2012) Changes in the chondrocyte and extracellular matrix proteome during post-natal mouse cartilage development. Mol. Cell. Proteomics 11, M111.014159.
-
(2012)
Mol. Cell. Proteomics
, vol.11
-
-
Wilson, R.1
Norris, E.L.2
Brachvogel, B.3
-
118
-
-
36049047977
-
Comparative proteomic characterization of articular cartilage tissue from normal donors and patients with osteoarthritis
-
Wu J., Liu W., Bemis A. et al. (2007) Comparative proteomic characterization of articular cartilage tissue from normal donors and patients with osteoarthritis. Arthritis Rheum. 56, 3675-3684.
-
(2007)
Arthritis Rheum.
, vol.56
, pp. 3675-3684
-
-
Wu, J.1
Liu, W.2
Bemis, A.3
-
119
-
-
79960566670
-
Differential expression of extracellular matrix proteins in senescent and young human fibroblasts: a comparative proteomics and microarray study
-
Yang K.E., Kwon J., Rhim J.H. et al. (2011) Differential expression of extracellular matrix proteins in senescent and young human fibroblasts: a comparative proteomics and microarray study. Mol. Cells 32, 99-106.
-
(2011)
Mol. Cells
, vol.32
, pp. 99-106
-
-
Yang, K.E.1
Kwon, J.2
Rhim, J.H.3
-
120
-
-
34547606042
-
Functional atlas of the integrin adhesome
-
Zaidel-Bar R., Itzkovitz S., Ma'ayan A., Iyengar R., Geiger B. (2007) Functional atlas of the integrin adhesome. Nat. Cell Biol. 9, 858-867.
-
(2007)
Nat. Cell Biol.
, vol.9
, pp. 858-867
-
-
Zaidel-Bar, R.1
Itzkovitz, S.2
Ma'ayan, A.3
Iyengar, R.4
Geiger, B.5
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