SCOPUS 정보 검색 플랫폼

RSC Advances

Volumn 3, Issue 12, 2013, Pages 4066-4073

QM/MM description of platinum-DNA interactions: Comparison of binding and DNA distortion of five drugs

(3) Gkionis, Konstantinos a Mutter, Shaun T a Platts, James A a

a CARDIFF UNIVERSITY (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; COMPLEXATION; DNA; HYDROGEN BONDS; ISOMERS; LIGANDS; PLATINUM; PLATINUM COMPOUNDS;

ANTICANCER DRUG; CARRIER LIGANDS; CIS-PLATIN; COMPLEX GEOMETRIES; DNA BINDING; HELICAL STRUCTURES; HYBRID QM/MM; NMR STRUCTURES; NON-COVALENT INTERACTION; OCTAMERS; OXALIPLATIN; PHOSPHATE GROUP;

DRUG INTERACTIONS;

EID: 84874432120 PISSN: None EISSN: 20462069 Source Type: Journal
DOI: 10.1039/c3ra23041d Document Type: Article

Times cited : (26)

References (53)

1
- 37049053957
- B. Rosenberg L.V. Van Camp T. Krigas Nature 1965 205 698
- (1965) Nature , vol.205 , pp. 698
- Rosenberg, B.¹ Van Camp, L.V.² Krigas, T.³

2
- 0014691619
- B. Rosenberg L.V. Van Camp J. E. Trosko V. H. Mansour Nature 1969 222 385
- (1969) Nature , vol.222 , pp. 385
- Rosenberg, B.¹ Van Camp, L.V.² Trosko, J.E.³ Mansour, V.H.⁴

3
- 24644486532
- E. Wong C. M. Giandomenico Chem. Rev. 1999 99 2451
- (1999) Chem. Rev. , vol.99 , pp. 2451
- Wong, E.¹ Giandomenico, C.M.²

4
- 0029926650
- J. Reedijk Chem. Commun. 1996 801
- (1996) Chem. Commun. , pp. 801
- Reedijk, J.¹

5
- 23244459221
- M. Galanski M. A. Jakupec B. K. Keppler Curr. Med. Chem. 2005 12 2075
- (2005) Curr. Med. Chem. , vol.12 , pp. 2075
- Galanski, M.¹ Jakupec, M.A.² Keppler, B.K.³

6
- 0037714214
- M. A. Jakupec M. Galanski B. K. Keppler Rev. Physiol., Biochem., Pharmacol. 2003 146 1
- (2003) Rev. Physiol., Biochem., Pharmacol. , vol.146 , pp. 1
- Jakupec, M.A.¹ Galanski, M.² Keppler, B.K.³

7
- 0033789184
- J. M. Woynarowski S. Faivre M. C. Herzig Mol. Pharmacol. 2000 58 920 7
- (2000) Mol. Pharmacol. , vol.58 , pp. 920-927
- Woynarowski, J.M.¹ Faivre, S.² Herzig, M.C.³

8
- 34249945447
- Y. Wu D. Bhattacharyya C. L. King I. Baskerville-Abraham S.-H. Huh G. Boysen J. A. Swenberg B. Temple S. L. Campbell S. G. Chaney Biochemistry 2007 46 6477
- (2007) Biochemistry , vol.46 , pp. 6477
- Wu, Y.¹ Bhattacharyya, D.² King, C.L.³ Baskerville-Abraham, I.⁴ Huh, S.-H.⁵ Boysen, G.⁶ Swenberg, J.A.⁷ Temple, B.⁸ Campbell, S.L.⁹ Chaney, S.G.¹⁰

9
- 0002817123
- P. Carloni W. Andreoni J. Hutter A. Curioni P. Giannozzi M. Parinello Chem. Phys. Lett. 1995 234 50 56
- (1995) Chem. Phys. Lett. , vol.234 , pp. 50-56
- Carloni, P.¹ Andreoni, W.² Hutter, J.³ Curioni, A.⁴ Giannozzi, P.⁵ Parinello, M.⁶

10
- 0000547535
- P. N. V. Pavankumar P. Seetharamulu S. Yao J. D. Saxe D. G. Reddy F. H. Hausheer J. Comput. Chem. 1999 20 365 382
- (1999) J. Comput. Chem. , vol.20 , pp. 365-382
- Pavankumar, P.N.V.¹ Seetharamulu, P.² Yao, S.³ Saxe, J.D.⁴ Reddy, D.G.⁵ Hausheer, F.H.⁶

11
- 84962426340
- Y. Zhang Z. Guo X.-Z. You J. Am. Chem. Soc. 2001 123 9378 9387
- (2001) J. Am. Chem. Soc. , vol.123 , pp. 9378-9387
- Zhang, Y.¹ Guo, Z.² You, X.-Z.³

12
- 32244444780
- J. K.-C. Lau D. V. Deubel J. Chem. Theory Comput. 2006 2 103 106
- (2006) J. Chem. Theory Comput. , vol.2 , pp. 103-106
- Lau, J.K.-C.¹ Deubel, D.V.²

13
- 10944263740
- J. Raber C. Zhu L. A. Eriksson Mol. Phys. 2004 102 2537 2544
- (2004) Mol. Phys. , vol.102 , pp. 2537-2544
- Raber, J.¹ Zhu, C.² Eriksson, L.A.³

14
- 20344379193
- J. V. Burda M. Zeizinger J. Comput. Chem. 2005 26 907 914
- (2005) J. Comput. Chem. , vol.26 , pp. 907-914
- Burda, J.V.¹ Zeizinger, M.²

15
- 0022648316
- H. Basch M. Krauss W. J. Stevens D. Cohen Inorg. Chem. 1986 25 684 688
- (1986) Inorg. Chem. , vol.25 , pp. 684-688
- Basch, H.¹ Krauss, M.² Stevens, W.J.³ Cohen, D.⁴

16
- 0242582476
- M.-H. Baik R. A. Friesner S. J. Lippard J. Am. Chem. Soc. 2003 125 14082 14092
- (2003) J. Am. Chem. Soc. , vol.125 , pp. 14082-14092
- Baik, M.-H.¹ Friesner, R.A.² Lippard, S.J.³

17
- 0242322061
- J. V. Burda J. Leszczynski Inorg. Chem. 2003 42 7162 7172
- (2003) Inorg. Chem. , vol.42 , pp. 7162-7172
- Burda, J.V.¹ Leszczynski, J.²

18
- 12344290093
- A. Robertazzi J. A. Platts Inorg. Chem. 2005 44 267 274
- (2005) Inorg. Chem. , vol.44 , pp. 267-274
- Robertazzi, A.¹ Platts, J.A.²

19
- 34247486491
- Y. Mantri S. J. Lippard M.-H. Baik J. Am. Chem. Soc. 2007 129 5023 5030
- (2007) J. Am. Chem. Soc. , vol.129 , pp. 5023-5030
- Mantri, Y.¹ Lippard, S.J.² Baik, M.-H.³

20
- 0032866230
- E. D. Scheeff J. M. Briggs S. B. Howell Mol. Pharm. 1999 56 633 643
- (1999) Mol. Pharm. , vol.56 , pp. 633-643
- Scheeff, E.D.¹ Briggs, J.M.² Howell, S.B.³

21
- 1542305706
- K. Spiegel U. Rothlisberger P. Carloni J. Phys. Chem. B 2004 108 2699 2707
- (2004) J. Phys. Chem. B , vol.108 , pp. 2699-2707
- Spiegel, K.¹ Rothlisberger, U.² Carloni, P.³

22
- 33745478907
- K. Spiegel A. Magistrato Org. Biomol. Chem. 2006 4 2507 2517
- (2006) Org. Biomol. Chem. , vol.4 , pp. 2507-2517
- Spiegel, K.¹ Magistrato, A.²

23
- 33644977537
- A. Magistrato P. Ruggerone K. Spiegel P. Carloni J. Reedijk J. Phys. Chem. B 2006 110 3604 3613
- (2006) J. Phys. Chem. B , vol.110 , pp. 3604-3613
- Magistrato, A.¹ Ruggerone, P.² Spiegel, K.³ Carloni, P.⁴ Reedijk, J.⁵

24
- 37649005841
- K. Spiegel A. Magistrato P. Maurer P. Ruggerone U. Rothlisberger P. Carloni J. Reedijk M. L. Klein J. Comput. Chem. 2008 29 38 49
- (2008) J. Comput. Chem. , vol.29 , pp. 38-49
- Spiegel, K.¹ Magistrato, A.² Maurer, P.³ Ruggerone, P.⁴ Rothlisberger, U.⁵ Carloni, P.⁶ Reedijk, J.⁷ Klein, M.L.⁸

25
- 17444362297
- C. Gossens I. Tavernelli U. Rothlisberger Chimia 2005 59 81 84
- (2005) Chimia , vol.59 , pp. 81-84
- Gossens, C.¹ Tavernelli, I.² Rothlisberger, U.³

26
- 33746884330
- A. Robertazzi J. A. Platts Chem.-Eur. J. 2006 12 5747 5756
- (2006) Chem.-Eur. J. , vol.12 , pp. 5747-5756
- Robertazzi, A.¹ Platts, J.A.²

27
- 33847033346
- T. Matsui Y. Shigeta K. Hirao J. Phys. Chem. B 2007 111 1176 1181
- (2007) J. Phys. Chem. B , vol.111 , pp. 1176-1181
- Matsui, T.¹ Shigeta, Y.² Hirao, K.³

28
- 66549084483
- M.-E. Moret I. Tavernelli U. Rothlisberger J. Phys. Chem. B 2009 113 7737 7744
- (2009) J. Phys. Chem. B , vol.113 , pp. 7737-7744
- Moret, M.-E.¹ Tavernelli, I.² Rothlisberger, U.³

29
- 77955092017
- D. Ambrosek P.-F. Loos X. Assfeld C. Daniel J. Inorg. Biochem. 2010 104 893 901
- (2010) J. Inorg. Biochem. , vol.104 , pp. 893-901
- Ambrosek, D.¹ Loos, P.-F.² Assfeld, X.³ Daniel, C.⁴

30
- 84865480883
- J. P. Ceron-Carrasco D. Jacquemin E. Cauet Phys. Chem. Chem. Phys. 2012 14 12457 12464
- (2012) Phys. Chem. Chem. Phys. , vol.14 , pp. 12457-12464
- Ceron-Carrasco, J.P.¹ Jacquemin, D.² Cauet, E.³

31
- 84857736917
- A. V. Vargiu A. Magistrato Inorg. Chem. 2012 51 2046 2057
- (2012) Inorg. Chem. , vol.51 , pp. 2046-2057
- Vargiu, A.V.¹ Magistrato, A.²

32
- 84866249212
- Z. Futera J. A. Platts J. V. Burda J. Comput. Chem. 2012 33 2092 2101
- (2012) J. Comput. Chem. , vol.33 , pp. 2092-2101
- Futera, Z.¹ Platts, J.A.² Burda, J.V.³

33
- 84863872128
- K. Gkionis J. A. Platts Comput. Theor. Chem. 2012 993 60 65
- (2012) Comput. Theor. Chem. , vol.993 , pp. 60-65
- Gkionis, K.¹ Platts, J.A.²

34
- 33746381417
- T. Vreven K. S. Byun I. Komáromi S. Dapprich J. A. Montgomery Jr K. Morokuma M. J. Frisch J. Chem. Theory Comput. 2006 2 815
- (2006) J. Chem. Theory Comput. , vol.2 , pp. 815
- Vreven, T.¹ Byun, K.S.² Komáromi, I.³ Dapprich, S.⁴ Montgomery Jr., J.A.⁵ Morokuma, K.⁶ Frisch, M.J.⁷

35
- 79952130294
- Gaussian, Inc., Wallingford CT
- M. J. Frisch et al., Gaussian09 Revision C.01, Gaussian, Inc., Wallingford CT, 2010
- (2010) Gaussian09 Revision C.01
- Frisch, M.J.¹

36
- 34250817103
- A. D. Becke J. Chem. Phys. 1993 98 1372
- (1993) J. Chem. Phys. , vol.98 , pp. 1372
- Becke, A.D.¹

37
- 0347170005
- W. J. Hehre R. Ditchfield J. A. Pople J. Chem. Phys. 1972 56 2257
- (1972) J. Chem. Phys. , vol.56 , pp. 2257
- Hehre, W.J.¹ Ditchfield, R.² Pople, J.A.³

38
- 36549091139
- M. J. Frisch J. A. Pople J. S. Binkley J. Chem. Phys. 1984 80 3265
- (1984) J. Chem. Phys. , vol.80 , pp. 3265
- Frisch, M.J.¹ Pople, J.A.² Binkley, J.S.³

39
- 11744322674
- A. A. Haußerman U. Dolg M. Stoll H. Preuß Theor. Chim. Acta 1990 77 123
- (1990) Theor. Chim. Acta , vol.77 , pp. 123
- Haußerman, A.A.¹ Dolg, U.² Stoll, M.³ Preuß, H.⁴

40
- 0029011701
- W. D. Cornell P. Cieplak C. I. Bayly I. R. Gould K. M. Merz Jr D. M. Ferguson D. C. Spellmeyer T. Fox J. W. Caldwell P. A. Kollman J. Am. Chem. Soc. 1995 117 5179
- (1995) J. Am. Chem. Soc. , vol.117 , pp. 5179
- Cornell, W.D.¹ Cieplak, P.² Bayly, C.I.³ Gould, I.R.⁴ Merz, Jr.K.M.⁵ Ferguson, D.M.⁶ Spellmeyer, D.C.⁷ Fox, T.⁸ Caldwell, J.W.⁹ Kollman, P.A.¹⁰

41
- 84986492477
- B. H. Besler K. M. Merz Jr P. A. Kollman J. Comput. Chem. 1990 11 431
- (1990) J. Comput. Chem. , vol.11 , pp. 431
- Besler, B.H.¹ Merz, Jr.K.M.² Kollman, P.A.³

42
- 0002077637
- P. Csaszar P. Pulay J. Mol. Struct. 1984 114 31
- (1984) J. Mol. Struct. , vol.114 , pp. 31
- Csaszar, P.¹ Pulay, P.²

43
- 0028882092
- D. Yang S. S. van Boom J. Reedijk J. H. van Boom A. H. Wang Biochemistry 1995 34 12912
- (1995) Biochemistry , vol.34 , pp. 12912
- Yang, D.¹ Van Boom, S.S.² Reedijk, J.³ Van Boom, J.H.⁴ Wang, A.H.⁵

44
- 84874623567
- Chemical Computing Group Inc., Montreal
- MOE 2009.10, Chemical Computing Group Inc., Montreal, 2009
- (2009) Moe 2009.10

45
- 84962383337
- T. Vreven B. Mennucci C. O. da Silva K. Morokuma J. J. Tomasi Chem. Phys. 2001 115 62 72
- (2001) Chem. Phys. , vol.115 , pp. 62-72
- Vreven, T.¹ Mennucci, B.² Da Silva, C.O.³ Morokuma, K.⁴ Tomasi, J.J.⁵

46
- 84962362288
- S. J. Mo T. Vreven B. Mennucci K. Morokuma J. Tomasi Theor. Chem. Acc. 2004 111 154 61
- (2004) Theor. Chem. Acc. , vol.111 , pp. 154-161
- Mo, S.J.¹ Vreven, T.² Mennucci, B.³ Morokuma, K.⁴ Tomasi, J.⁵

47
- 0242396923
- X.-J. Lu W. K. Olson Nucleic Acids Res. 2003 31 5108 21
- (2003) Nucleic Acids Res. , vol.31 , pp. 5108-5121
- Lu, X.-J.¹ Olson, W.K.²

48
- 67849118784
- K. Gkionis J. G. Hill S. P. Oldfield J. A. Platts J. Mol. Model. 2009 15 1051
- (2009) J. Mol. Model. , vol.15 , pp. 1051
- Gkionis, K.¹ Hill, J.G.² Oldfield, S.P.³ Platts, J.A.⁴

49
- 70349240342
- R. W. F. Bader J. Phys. Chem. A 2009 113 10391 10396
- (2009) J. Phys. Chem. A , vol.113 , pp. 10391-10396
- Bader, R.W.F.¹

50
- 79958834481
- R. W. F. Bader Found. Chem. 2011 13 11 37
- (2011) Found. Chem. , vol.13 , pp. 11-37
- Bader, R.W.F.¹

51
- 84859610965
- P. Dem'yanov P. Polestshuk Chem.-Eur. J. 2012 18 4982 4993
- (2012) Chem.-Eur. J. , vol.18 , pp. 4982-4993
- Dem'Yanov, P.¹ Polestshuk, P.²

52
- 79952583698
- J. Contreras-García E. R. Johnson S. Keinan R. Chaudret J.-P. Piquemal D. N. Beratan W. J. Yang J. Chem. Theory Comput. 2011 7 625 632
- (2011) J. Chem. Theory Comput. , vol.7 , pp. 625-632
- Contreras-García, J.¹ Johnson, E.R.² Keinan, S.³ Chaudret, R.⁴ Piquemal, J.-P.⁵ Beratan, D.N.⁶ Yang, W.J.⁷

53
- 4143129098
- E. R. Johnson R. A. Wolkow G. A. Dilabio Chem. Phys. Lett. 2004 394 334 338
- (2004) Chem. Phys. Lett. , vol.394 , pp. 334-338
- Johnson, E.R.¹ Wolkow, R.A.² Dilabio, G.A.³

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