Ethylene-responsive transcription factors interact with promoters of ADH and PDC involved in persimmon (Diospyros kaki) fruit de-astringency

Journal of Experimental Botany

Volumn 63, Issue 18, 2012, Pages 6393-6405

  Min, Ting ^a   Yin, Xue Ren ^a   Shi, Yan Na ^a   Luo, Zheng Rong ^b   Yao, Yun Cong ^c   Grierson, Donald ^a,d   Ferguson, Ian B ^a,e   Chen, Kun Song ^a  

^a ZHEJIANG UNIVERSITY   (China)

^b HUAZHONG AGRICULTURAL UNIVERSITY   (China)

^c BEIJING UNIVERSITY OF AGRICULTURE   (China)

^d UNIVERSITY OF NOTTINGHAM   (United Kingdom)

^e THE NEW ZEALAND INSTITUTE FOR PLANT AND FOOD RESEARCH LIMITED   (New Zealand)

Author keywords

ADH; de astringency; Diospyros kaki; ERF; ethylene; hypoxia; PDC; soluble tannins; transcriptional regulation

Indexed keywords

ALCOHOL DEHYDROGENASE; ASTRINGENT AGENT; CARBON DIOXIDE; ETHYLENE; ETHYLENE DERIVATIVE; PROANTHOCYANIDIN; PYRUVATE DECARBOXYLASE; TRANSCRIPTION FACTOR; VEGETABLE PROTEIN;

ANAEROBIC GROWTH; ARTICLE; DIOSPYROS; EXPRESSED SEQUENCE TAG; FRUIT; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; PHYLOGENY; PLANT LEAF; PRINCIPAL COMPONENT ANALYSIS; PROMOTER REGION; REAL TIME POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS;

ALCOHOL DEHYDROGENASE; ANAEROBIOSIS; ASTRINGENTS; CARBON DIOXIDE; DIOSPYROS; ETHYLENES; EXPRESSED SEQUENCE TAGS; FRUIT; GENE EXPRESSION REGULATION, PLANT; PHYLOGENY; PLANT LEAVES; PLANT PROTEINS; PRINCIPAL COMPONENT ANALYSIS; PROANTHOCYANIDINS; PROMOTER REGIONS, GENETIC; PYRUVATE DECARBOXYLASE; REAL-TIME POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, PROTEIN; TRANSCRIPTION FACTORS;

DIOSPYROS; DIOSPYROS KAKI;

EID: 84870015786     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/ers296     Document Type: Article

References (48)

1. Akagi T, Ikegami A, Suzuki Y, Yoshida J, Yamada M, Sato A, Yonemori K. 2009a. Expression balances of structural genes in shikimate and flavonoid biosynthesis cause a difference in proanthocyanidin accumulation in persimmon (Diospyros kaki Thunb.) fruit. Planta 230, 899-915.
2. Akagi T, Ikegami A, Tsujimoto T, Kobayashi S, Sato A, Kono A, Yonemori K. 2009b. DkMyb4 is a Myb transcription factor involved in proanthocyanidin biosynthesis in persimmon fruit. Plant Physiology 151, 2028-2045.
3. Arnal L, Del Río MA. 2003. Removing astringency by carbon dioxide and nitrogen-enriched atmospheres in persimmon fruit cv. 'Rojo brillante'. Journal of Food Science 68, 1516-1518. (Pubitemid 36632108)
4. Bucher M, Brander KA, Sbicego S, Mandel T, Kuhlemeier C. 1995. Aerobic fermentation in tobacco pollen. Plant Molecular Biology 28, 739-750.
5. Botondi R, Russo V, Mencarelli F. 2012. Anaerobic metabolism during short and long term storage of kiwifruit. Postharvest Biology and Technology 64, 83-90.
6. Chang S, Puryear J, Cairney J. 1993. A simple and efficient method for isolating RNA from pine trees. Plant Molecular Biology Reporter 11, 113-116.
7. Chung MY, Vrebalov J, Alba R, Lee JM, McQuinn R, Chung JD, Klein P, Giovannoni J. 2010. A tomato (Solanum lycopersicum) APETALA2/ERF gene, SlAP2a, is a negative regulator of fruit ripening. The Plant Journal 64, 936-947.
8. Del Bubba M, Giordani E, Pippucci L, Cincinelli A, Checchini L, Galvan P. 2009. Changes in tannins, ascorbic acid and sugar content in astringent persimmons during on-tree growth and ripening and in response to different postharvest treatments. Journal of Food Composition and Analysis 22, 668-677.
9. Espley RV, Hellens RP, Putterill J, Stevenson DE, Kutty-Amma S, Allan AC. 2007. Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10. The Plant Journal 49, 414-427. (Pubitemid 46146623)
10. Feng C, Chen M, Xu Cj, Bai L, Yin XR, Li X, Allan AC, Ferguson IB, Chen KS. 2012. Transcriptomic analysis of Chinese bayberry (Myrica rubra) fruit development and ripening using RNA-Seq. BMC Genomics 13, 19.
11. Gibbs DJ, Lee SC, Isa NM, et al. 2011. Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants. Nature 479, 415-418.
12. González-Agüero M, Troncoso S, Gudenschwager O, Campos-Vargas R, Mpya-León M, Defilippi BG. 2009. Differential expression levels of aroma-related genes during ripening of apricot (Prunus armeniaca L.). Plant Physiology and Biochemistry 47, 435-440.
13. Hellens R, Allan A, Friel E, Bolitho K, Grafton K, Templeton M, Karunairetnam S, Gleave A, Laing W. 2005. Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants. Plant Methods 1, 13.
14. Hinz M, Wilson IW, Yang J, Buerstenbinder K, Llewellyn D, Dennis ES, Sauter M, Dolferus R. 2010. Arabidopsis RAP2.2: An ethylene response transcription factor that is important for hypoxia survival. Plant Physiology 153, 757-772.
15. Ikegami A, Eguchi S, Kitajima A, Inoue K, Yonemori K. 2007. Identification of genes involved in proanthocyanidin biosynthesis of persimmon (Diospyros kaki) fruit. Plant Science 172, 1037-1047. (Pubitemid 46517740)
16. Lata C, Prasad M. 2011. Role of DREBs in regulation of abiotic stress responses in plants. Journal of Experimental Botany 62, 4731-4748.
17. Lee JM, Joung JG, McQuinn R, Chung MY, Fei ZJ, Tieman D, Klee H, Giovannoni J. 2012. Combined transcriptome, genetic diversity and metabolite profiling in tomato fruit reveals that the ethylene response factor SlERF6 plays an important role in ripening and carotenoid accumulation. The Plant Journal 70, 191-204.
18. Licausi F, Kosmacz M, Weits DA, Giuntoli B, Giorgi FM, Voesenek LACJ, Perata P, van Dongen JT. 2011a. Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization. Nature 479, 419-422.
19. Licausi F, van Dongen JT, Giuntoli B, Novi G, Santaniello A, Geigenberger P, Perata P. 2010. HRE1 and HRE2, two hypoxiainducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana. The Plant Journal 62, 302-315.
20. Licausi F, Weits DA, Pant BD, Scheible WR, Geigenberger P, van Dongen JT. 2011b. Hypoxia responsive gene expression is mediated by various subsets of transcription factors and miRNAs that are determined by the actual oxygen availability. New Phytologist 190, 442-456.
21. Liu CP, Zheng ZM, Liang YN, Li B. 2008. Relationship between activity of alcohol dehydrogenase and soluble tannin in persimmon. Acta Horticulturae Sinica 35, 741-746. (In Chinese, with English abstract)
22. Longhurst T, Lee E, Hinde R, Brady C, Speirs J. 1994. Structure of the tomato Adh2 gene and Adh2 pseudogenes, and a study of Adh2 gene expression in fruit. Plant Molecular Biology 26, 1073-1084.
23. Manríquez D, EI-Sharkawy I, Flores FB, EI-Yahyaoui F, Regad F, Bouzayen M, Latché A, Pech JC. 2006. Two highly divergent alcohol dehydrogenases of melon exhibit fruit ripening-specific expression and distinct biochemical characteristics. Plant Molecular Biology 61, 675-685. (Pubitemid 44168584)
24. Matsuo T, Ito S. 1977. On mechanisms of removing astringency in persimmon fruits by carbon dioxide treatment. I. Some properties of the two processes in the de-astringency. Plant and Cell Physiology 18, 17-25.
25. Nakagawa T, Nakatsuka A, Yano K, Yasugahira S, Nakamura R, Sun N, Itai A, Suzuki T, Itamura H. 2008. Expressed sequence tags from persimmon at different developmental stages. Plant Cell Reports 27, 931-938.
26. Nakano T, Suzuki K, Fujimura T, Shinshi H. 2006. Genomewide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiology 140, 411-432. (Pubitemid 43956266)
27. Nguyen T, Drotar AM, Monson RK, Fall R. 2009. A high affinity pyruvate decarboxylase is present in cottonwood leaf veins and petioles: A second source of leaf acetaldehyde emission? Phytochemistry 70, 1217-1221.
28. Pesis E. 2005. The role of the anaerobic metabolites, acetaldehyde and ethanol, in fruit ripening, enhancement of fruit quality and fruit deterioration. Postharvest Biology and Technology 37, 1-19. (Pubitemid 40837177)
29. Pesis E, Ben-Arie R. 2006. Involvement of acetaldehyde and ethanol accumulation during induced deastringency of persimmon fruits. Journal of Food Science 49, 896-899.
30. Riechmann JL, Heard J, Martin G, et al. 2000. Arabidopsis transcription factors: Genome-wide comparative analysis among eukaryotes. Science 290, 2105-2110 (Pubitemid 32001583)
31. Salvador A, Arnal L, Besada C, Larrea V, Quiles A, Pérez-Munuera I. 2007. Physiological and structural changes during ripening and deastringency treatment of persimmon fruit cv. 'Rojo Brillante'. Postharvest Biology and Technology 46, 181-188. (Pubitemid 47484196)
32. Sasidharan R, Mustroph A. 2011. Plant oxygen sensing is mediated by the N-end rule pathway: A milestone in plant anaerobiosis. The Plant Cell 23, 4173-4183.
33. Speirs J, Lee E, Holt K, Yong-Duk K, Scott NS, Loveys B, Schuch W. 1998. Genetic manipulation of alcohol dehydrogenase levels in ripening tomato fruit affects the balance of some flavor aldehydes and alcohols. Plant Physiology 117, 1047-1058. (Pubitemid 128652878)
34. Strommer J. 2011. The plant ADH gene family. The Plant Journal 66, 128-142.
35. Tacken E, Ireland H, Gunaseelan K, et al. 2010. The role of ethylene and cold temperature in the regulation of the apple POLYGALACTURONASE1 gene and fruit softening. Plant Physiology 153, 294-305.
36. Taira S, Ikeda K, Ohkawa K. 2001. Comparison of insolubility of tannins induced by acetaldehyde vapor in fruit of three types of astringent persimmon. Journal of the Japanese Society for Horticultural Science 48, 684-687.
37. Tamura F, Tanabe K, Itai A, Hasegawa M. 1999. Characteristics of acetaldehyde accumulation and removal of astringency with ethanol and carbon dioxide treatments in 'Saijo' persimmon fruit. Journal of the Japanese Society for Horticultural Science 68, 1178-1183.
38. Tanaka T, Takahashi R, Kouno I, Nonaka GI. 1994. Chemical evidence for the de-astringency (insolubilization of tannins) of persimmon fruit. Journal of the Chemical Society, Perkin Transactions 1 20, 3013-3022.
39. Wang RZ, Yang Y, Li GC. 1997. Chinese persimmon germplasm resources. Acta Horticulturae 436, 43-50. (Pubitemid 127041240)
40. Yamada M, Yamane H, Sato A, Hirakawa N, Wang RZ. 1994. Variations in fruit ripening time, fruit weight and soluble solids content of oriental persimmon cultivars native to Japan. Journal of the Japanese Society for Horticultural Science 63, 485-491.
41. Yamada M, Taira S, Ohtsuki M, Sato A, Iwanami H, Yakushiji H, Wang RZ, Yang Y, Li GC. 2002. Varietal differences in the ease of astringency removal by carbon dioxide gas and ethanol vapor treatments among Oriental astringent persimmons of Japanese and Chinese origin. Scientia Horticulturae 94, 63-72. (Pubitemid 34616883)
42. Yang CY, Hsu FC, Li JP, Wang NN, Shih MC. 2011. The AP2/ ERF transcription factor AtERF73/HRE1 modulates ethylene responses during hypoxia in Arabidopsis. Plant Physiology 156, 202-212.
43. Yin XR, Chen KS, Allan AC, Wu RM, Zhang B, Lallu N, Ferguson IB. 2008. Ethylene-induced modulation of genes associated with the ethylene signaling pathway in ripening kiwifruit. Journal of Experimental Botany 59, 2097-2108. (Pubitemid 351809646)
44. Yin XR, Allan AC, Chen KS, Ferguson IB. 2010. Kiwifruit EIL and ERF genes involved in regulating fruit ripening. Plant Physiology 153, 1280-1292.
45. Yin XR, Shi YN, Min T, Luo ZR, Yao YC, Xu Q, Ferguson IB, Chen KS. 2012. Expression of ethylene response genes during persimmon fruit astringency removal. Planta 235, 895-906.
46. Zhang ZJ, Zhang HW, Quan RD, Wang XC, Huang RF. 2009. Transcriptional regulation of the ethylene response factor LeERF2 in the expression of ethylene biosynthesis genes controls ethylene production in tomato and tobacco. Plant Physiology 150, 365-377.
47. Zhang B, Shen JY, Wei WW, Xi WP, Xu CJ, Ferguson I, Chen KS. 2010. Expression of genes associated with aroma formation derived from the fatty acid pathway during peach fruit ripening. Journal of Agricultural and Food Chemistry 58, 6157-6165.
48. Zhang B, Xi WP, Wei WW, Shen JY, Ferguson I, Chen KS. 2011. Changes in aroma-related volatiles and gene expression during low temperature storage and subsequent shelf-life of peach fruit. Postharvest Biology and Technology 60, 7-16.