-
1
-
-
70449527373
-
Hypoxia hypoxia-inducible factors (HIF), HIF hydroxylases and oxygen sensing
-
Webb, J. D., Coleman, M. L. & Pugh, C. W. Hypoxia, hypoxia-inducible factors (HIF), HIF hydroxylases and oxygen sensing. Cell. Mol. Life Sci. 66, 3539-3554 (2009).
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, pp. 3539-3554
-
-
Webb, J.D.1
Coleman, M.L.2
Pugh, C.W.3
-
2
-
-
38649131270
-
Hypoxic reprogramming
-
DOI 10.1038/ng0208-132, PII NG0208132
-
Kelly, D. P. Hypoxic reprogramming. Nature Genet. 40, 132-134 (2008). (Pubitemid 351171410)
-
(2008)
Nature Genetics
, vol.40
, Issue.2
, pp. 132-134
-
-
Kelly, D.P.1
-
3
-
-
77949535960
-
Cross-kingdom comparison of transcriptomic adjustments to low-oxygen stress highlights conserved and plant-specific responses
-
Mustroph, A. et al. Cross-kingdom comparison of transcriptomic adjustments to low-oxygen stress highlights conserved and plant-specific responses. Plant Physiol. 152, 1484-1500 (2010).
-
(2010)
Plant Physiol.
, vol.152
, pp. 1484-1500
-
-
Mustroph, A.1
-
4
-
-
44949119488
-
Flooding stress: Acclimations and genetic diversity
-
DOI 10.1146/annurev.arplant.59.032607.092752
-
Bailey-Serres, J. & Voesenek, L. A. C. J. Flooding stress: acclimations and genetic diversity. Annu. Rev. Plant Biol. 59, 313-339 (2008). (Pubitemid 351813033)
-
(2008)
Annual Review of Plant Biology
, vol.59
, pp. 313-339
-
-
Bailey-Serres, J.1
Voesenek, L.A.C.J.2
-
5
-
-
63749120290
-
Bacterial sensors of oxygen
-
Green, J., Crack, J. C., Thomson, A. J. & LeBrun, N. E. Bacterial sensors of oxygen. Curr. Opin. Microbiol. 12, 145-151 (2009).
-
(2009)
Curr. Opin. Microbiol.
, vol.12
, pp. 145-151
-
-
Green, J.1
Crack, J.C.2
Thomson, A.J.3
Lebrun, N.E.4
-
6
-
-
0034598826
-
Myoglobin-like aerotaxis transducers in Archaea and Bacteria
-
DOI 10.1038/35000570
-
Hou, S. et al. Myoglobin-like aerotaxis transducers in Archaea and Bacteria. Nature 403, 540-544 (2000). (Pubitemid 30082198)
-
(2000)
Nature
, vol.403
, Issue.6769
, pp. 540-544
-
-
Hou, S.1
Larsen, R.W.2
Boudko, D.3
Riley, C.W.4
Karatan, E.5
Zimmer, M.6
Ordal, G.W.7
Alam, M.8
-
7
-
-
72749086098
-
Evolutionary conservation and adaptation in the mechanismthat regulatesSREBPaction:what a long strange tRIP it's been
-
Osborne, T. F.& Espenshade, P. J. Evolutionary conservation and adaptation in the mechanismthat regulatesSREBPaction:what a long, strange tRIP it's been. Genes Dev. 23, 2578-2591 (2009).
-
(2009)
Genes Dev.
, vol.23
, pp. 2578-2591
-
-
Osborne, T.F.1
Espenshade, P.J.2
-
8
-
-
0035812772
-
2, and the 3 PHDs: How animal cells signal hypoxia to the nucleus
-
DOI 10.1016/S0092-8674(01)00518-9
-
Semenza, G. L. HIF-1, O2, and the 3 PHDs: how animal cells signal hypoxia to the nucleus. Cell 107, 1-3 (2001). (Pubitemid 32972030)
-
(2001)
Cell
, vol.107
, Issue.1
, pp. 1-3
-
-
Semenza, G.L.1
-
9
-
-
79952381729
-
Requirements for Skp1 processing by cytosolic Prolyl 4(trans)-hydroxylase and a-N-acetylglucosaminyltransferase enzymes involved in O2 signaling in Dictyostelium
-
van derWel, H. et al.Requirements for Skp1 processing by cytosolic Prolyl 4(trans)-hydroxylase and a-N-acetylglucosaminyltransferase enzymes involved in O2 signaling in Dictyostelium. Biochemistry 50, 1700-1713 (2011).
-
(2011)
Biochemistry
, vol.50
, pp. 1700-1713
-
-
Van Derwel, H.1
-
10
-
-
27244444724
-
RGS4 and RGS5 are in vivo of the N-end rule pathway
-
DOI 10.1073/pnas.0507533102
-
Lee, M. J. et al. RGS4 and RGS5 are in vivo substrates of the N-end rule pathway. Proc. Natl Acad. Sci. USA 102, 15030-15035 (2005). (Pubitemid 41513329)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.42
, pp. 15030-15035
-
-
Lee, M.J.1
Tasaki, T.2
Moroi, K.3
An, J.Y.4
Kimura, S.5
Davydov, I.V.6
Kwon, Y.T.7
-
11
-
-
77950148360
-
Structure and evolutionary conservation of the plant N-end rule pathway
-
Graciet, E., Mesiti, F. & Wellmer, F. Structure and evolutionary conservation of the plant N-end rule pathway. Plant J. 61, 741-751 (2010).
-
(2010)
Plant J.
, vol.61
, pp. 741-751
-
-
Graciet, E.1
Mesiti, F.2
Wellmer, F.3
-
12
-
-
77953210906
-
Arabidopsis RAP2.2: An ethylene response transcription factor that is important for hypoxia survival
-
Hinz, M. et al. Arabidopsis RAP2.2: an ethylene response transcription factor that is important for hypoxia survival. Plant Physiol. 153, 757-772 (2010).
-
(2010)
Plant Physiol.
, vol.153
, pp. 757-772
-
-
Hinz, M.1
-
13
-
-
77951988135
-
HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana
-
Licausi, F. et al. HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana. Plant J. 62, 302-315 (2010).
-
(2010)
Plant J.
, vol.62
, pp. 302-315
-
-
Licausi, F.1
-
14
-
-
33747035582
-
Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
-
DOI 10.1038/nature04920, PII NATURE04920
-
Xu, K. et al. Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice. Nature 442, 705-708 (2006). (Pubitemid 44215327)
-
(2006)
Nature
, vol.442
, Issue.7103
, pp. 705-708
-
-
Xu, K.1
Xu, X.2
Fukao, T.3
Canlas, P.4
Maghirang-Rodriguez, R.5
Heuer, S.6
Ismail, A.M.7
Bailey-Serres, J.8
Ronald, P.C.9
Mackill, D.J.10
-
15
-
-
69149109855
-
The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water
-
Hattori, Y. et al. The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water. Nature 460, 1026-1030 (2009).
-
(2009)
Nature
, vol.460
, pp. 1026-1030
-
-
Hattori, Y.1
-
16
-
-
48549102479
-
Functional identification of Arabidopsis stress regulatory genes using the controlled cDNA overexpression system
-
DOI 10.1104/pp.108.116897
-
Papdi, C. et al. Functional identification of Arabidopsis stress regulatorygenes using the controlled cDNA overexpression system. Plant Physiol. 147, 528-542 (2008). (Pubitemid 352844299)
-
(2008)
Plant Physiology
, vol.147
, Issue.2
, pp. 528-542
-
-
Papdi, C.1
Abraham, E.2
Joseph, M.P.3
Popescu, C.4
Koncz, C.5
Szabados, L.6
-
17
-
-
79953067376
-
Hypoxia responsive gene expression is mediated by various subsets of transcription factors and miRNAs that are determined by the actual oxygen availability
-
Licausi, F. et al. Hypoxia responsive gene expression is mediated by various subsets of transcription factors and miRNAs that are determined by the actual oxygen availability. New Phytol. 190, 442-456 (2011).
-
(2011)
New Phytol.
, vol.190
, pp. 442-456
-
-
Licausi, F.1
-
18
-
-
0037342067
-
Membrane localization of Arabidopsis acyl-CoA binding protein ACBP2
-
Li, H. Y. & Chye, M. L. Membrane localization of Arabidopsis acyl-CoA binding protein ACBP2. Plant Mol. Biol. 51, 483-492 (2003).
-
(2003)
Plant Mol. Biol.
, vol.51
, pp. 483-492
-
-
Li, H.Y.1
Chye, M.L.2
-
19
-
-
3442899142
-
ArabidopsisAcyl-CoA-binding proteinACBP2interacts with an ethylene-responsive element-binding protein, AtEBP, via its ankyrin repeats
-
Li, H. Y.&Chye, M. L. ArabidopsisAcyl-CoA-binding proteinACBP2interacts with an ethylene-responsive element-binding protein, AtEBP, via its ankyrin repeats. Plant Mol. Biol. 54, 233-243 (2004).
-
(2004)
Plant Mol. Biol.
, vol.54
, pp. 233-243
-
-
Li, H.Y.1
Chye, M.L.2
-
20
-
-
0030986363
-
The AP2 domain of APETALA2 defines a large new family of DNA binding proteins in Arabidopsis
-
DOI 10.1073/pnas.94.13.7076
-
Okamuro, J. K., Caster, B., Villarroel, R., Van Montagu, M. & Jofuku, K. D. The AP2 domain of APETALA2 defines a large new family of DNA binding proteins in Arabidopsis. Proc. Natl Acad. Sci. USA 94, 7076-7081 (1997). (Pubitemid 27281993)
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, Issue.13
, pp. 7076-7081
-
-
Okamuro, J.K.1
Caster, B.2
Villarroel, R.3
Van Montagu, M.4
Jofuku, K.D.5
-
21
-
-
0037025163
-
An essential role of N-terminal arginylation in cardiovascular development
-
DOI 10.1126/science.1069531
-
Kwon, Y. T. et al. An essential role of N-terminal arginylation in cardiovascular development. Science 297, 96-99 (2002). (Pubitemid 34743100)
-
(2002)
Science
, vol.297
, Issue.5578
, pp. 96-99
-
-
Kwon, Y.T.1
Kashina, A.S.2
Davydov, I.V.3
Hu, R.-G.4
An, J.Y.5
Seo, J.W.6
Du, F.7
Varshavsky, A.8
-
22
-
-
77955268037
-
The plant N-end rule pathway: Structure and functions
-
Graciet, E. & Wellmer, F. The plant N-end rule pathway: structure and functions. Trends Plant Sci. 15, 447-453 (2010).
-
(2010)
Trends Plant Sci.
, vol.15
, pp. 447-453
-
-
Graciet, E.1
Wellmer, F.2
-
23
-
-
0032127904
-
N-terminal processing: The methionine aminopeptidase and N(α)-acetyl transferase families
-
DOI 10.1016/S0968-0004(98)01227-4, PII S0968000498012274
-
Bradshaw, R. A., Brickey, W. W. & Walker, K. W. N-terminal processing: the methionine aminopeptidase and Na-acetyl transferase families. Trends Biochem. Sci. 23, 263-267 (1998). (Pubitemid 28343371)
-
(1998)
Trends in Biochemical Sciences
, vol.23
, Issue.7
, pp. 263-267
-
-
Bradshaw, R.A.1
Brickey, W.W.2
Walker, K.W.3
-
24
-
-
34250890107
-
PRT6/At5g02310 encodes an Arabidopsis ubiquitin ligase of the N-end rule pathway with arginine specificity and is not the CER3 locus
-
Garzó n, M. et al. PRT6/At5g02310 encodes an Arabidopsis ubiquitin ligase of the N-end rule pathway with arginine specificity and is not the CER3 locus. FEBS Lett. 581, 3189-3196 (2007).
-
(2007)
FEBS Lett.
, vol.581
, pp. 3189-3196
-
-
Garzó, N.M.1
-
25
-
-
0032867676
-
The 26S proteasome: A molecular machine designed for controlled proteolysis
-
DOI 10.1146/annurev.biochem.68.1.1015
-
Voges, D., Zwickl, P. & Baumeister, W. The 26S proteasome: a molecular machine designed for controlled proteolysis. Annu. Rev. Biochem. 68, 1015-1068 (2000). (Pubitemid 29449214)
-
(1999)
Annual Review of Biochemistry
, vol.68
, pp. 1015-1068
-
-
Voges, D.1
Zwickl, P.2
Baumeister, W.3
-
26
-
-
0028252053
-
Localization of proteasomes in plant cells
-
Vallon, U. & Kull, U. Localization of proteasomes in plant cells. Protoplasma 182, 15-18 (1994).
-
(1994)
Protoplasma
, vol.182
, pp. 15-18
-
-
Vallon, U.1
Kull, U.2
-
27
-
-
78649724137
-
Growth-mediated stress escape: Convergence of signal transduction pathways activated upon exposure to two different environmental stresses
-
Pierik, R., de Wit, M. & Voesenek, L. A. C. J. Growth-mediated stress escape: convergence of signal transduction pathways activated upon exposure to two different environmental stresses. New Phytol. 189, 122-134 (2011).
-
(2011)
New Phytol.
, vol.189
, pp. 122-134
-
-
Pierik, R.1
De Wit, M.2
Voesenek, L.A.C.J.3
-
28
-
-
33845435000
-
Agrobacterium-mediated transformation of Arabidopsis thaliana using the floral dipmethod
-
Zhang, X.,Henriques, R., Lin,S. S., Niu, Q. W.&Chua, N. H. Agrobacterium-mediated transformation of Arabidopsis thaliana using the floral dipmethod. Nature Protocols 1, 641-646 (2006).
-
(2006)
Nature Protocols
, vol.1
, pp. 641-646
-
-
Zhang, X.1
Henriques, R.2
Lins, S.3
Niu, Q.W.4
Chua, N.H.5
-
29
-
-
33745252002
-
Transient expression assay by agroinfiltration of leaves
-
Lee, M. W. & Yang, Y. Transient expression assay by agroinfiltration of leaves. Methods Mol. Biol. 323, 225-229 (2006).
-
(2006)
Methods Mol. Biol.
, vol.323
, pp. 225-229
-
-
Lee, M.W.1
Yang, Y.2
-
30
-
-
77953215305
-
Robin: An intuitive wizard application for R-based expression microarray quality assessment and analysis
-
Lohse, M. et al. Robin: An intuitive wizard application for R-based expression microarray quality assessment and analysis. Plant Physiol. 153, 642-651 (2010).
-
(2010)
Plant Physiol.
, vol.153
, pp. 642-651
-
-
Lohse, M.1
-
31
-
-
4544341015
-
Linearmodels andempiricalBayesmethods for assessing differential expression in microarray experiments
-
Article 3
-
Smyth, G. K. Linearmodels andempiricalBayesmethods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3, Article 3 (2004).
-
(2004)
Stat. Appl. Genet. Mol. Biol.
, vol.3
-
-
Smyth, G.K.1
-
32
-
-
0037433040
-
Identifying differentially expressed genes using false discovery rate controlling procedures
-
DOI 10.1093/bioinformatics/btf877
-
Reiner, A., Yekutieli, D. & Benjamini, Y. Identifying differentially expressed genes using false discovery rate controlling procedures. Bioinformatics 19, 368-375 (2003). (Pubitemid 36284936)
-
(2003)
Bioinformatics
, vol.19
, Issue.3
, pp. 368-375
-
-
Reiner, A.1
Yekutieli, D.2
Benjamini, Y.3
-
33
-
-
10844290766
-
A model-based background adjustment for oligonucleotide expression arrays
-
DOI 10.1198/016214504000000683
-
Wu, Z., Irizarry, R. A., Gentleman, R., Martinez-Murillo, F. & Spencer, F. A modelbased background adjustment for oligonucleotide expression arrays. J. Am. Stat. Assoc. 99, 909-917 (2004). (Pubitemid 39665934)
-
(2004)
Journal of the American Statistical Association
, vol.99
, Issue.468
, pp. 909-917
-
-
Wu, Z.1
Irizarry, R.A.2
Gentleman, R.3
Martinez-Murillo, F.4
Spencer, F.5
-
34
-
-
34447099171
-
Arabidopsis mesophyll protoplasts: A versatile cell system for transient gene expression analysis
-
DOI 10.1038/nprot.2007.199, PII NPROT.2007.199
-
Yoo, S. D., Cho, Y. H. & Sheen, J. Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis. Nature Protocols 2, 1565-1572 (2007). (Pubitemid 47028844)
-
(2007)
Nature Protocols
, vol.2
, Issue.7
, pp. 1565-1572
-
-
Yoo, S.-D.1
Cho, Y.-H.2
Sheen, J.3
-
35
-
-
70349601671
-
New GATEWAY vectors for high throughput analyses of protein-protein interactions by bimolecular fluorescence complementation
-
Gehl, C., Waadt, R., Kudla, J., Mendel, R.-R. & Hänsch, R. New GATEWAY vectors for high throughput analyses of protein-protein interactions by bimolecular fluorescence complementation. Mol. Plant 2, 1051-1058 (2009).
-
(2009)
Mol. Plant
, vol.2
, pp. 1051-1058
-
-
Gehl, C.1
Waadt, R.2
Kudla, J.3
Mendel, R.-R.4
Hänsch, R.5
|