-
1
-
-
77953143038
-
RNA polymerase II stalling mediates cytokine gene expression
-
K. Adelman, and I. Rogatsky RNA polymerase II stalling mediates cytokine gene expression Cell Cycle 9 2010 630 631
-
(2010)
Cell Cycle
, vol.9
, pp. 630-631
-
-
Adelman, K.1
Rogatsky, I.2
-
2
-
-
70849107088
-
Immediate mediators of the inflammatory response are poised for gene activation through RNA polymerase II stalling
-
K. Adelman, M.A. Kennedy, S. Nechaev, D.A. Gilchrist, G.W. Muse, Y. Chinenov, and I. Rogatsky Immediate mediators of the inflammatory response are poised for gene activation through RNA polymerase II stalling Proc. Natl. Acad. Sci. USA 106 2009 18207 18212
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 18207-18212
-
-
Adelman, K.1
Kennedy, M.A.2
Nechaev, S.3
Gilchrist, D.A.4
Muse, G.W.5
Chinenov, Y.6
Rogatsky, I.7
-
3
-
-
80055064689
-
Toll-8/Tollo negatively regulates antimicrobial response in the Drosophila respiratory epithelium
-
I. Akhouayri, C. Turc, J. Royet, and B. Charroux Toll-8/Tollo negatively regulates antimicrobial response in the Drosophila respiratory epithelium PLoS Pathog. 7 2011 e1002319
-
(2011)
PLoS Pathog.
, vol.7
, pp. 1002319
-
-
Akhouayri, I.1
Turc, C.2
Royet, J.3
Charroux, B.4
-
4
-
-
70349663498
-
A novel system for the launch of alphavirus RNA synthesis reveals a role for the Imd pathway in arthropod antiviral response
-
V. Avadhanula, B.P. Weasner, G.G. Hardy, J.P. Kumar, and R.W. Hardy A novel system for the launch of alphavirus RNA synthesis reveals a role for the Imd pathway in arthropod antiviral response PLoS Pathog. 5 2009 e1000582
-
(2009)
PLoS Pathog.
, vol.5
, pp. 1000582
-
-
Avadhanula, V.1
Weasner, B.P.2
Hardy, G.G.3
Kumar, J.P.4
Hardy, R.W.5
-
5
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
B.E. Bernstein, T.S. Mikkelsen, X. Xie, M. Kamal, D.J. Huebert, J. Cuff, B. Fry, A. Meissner, M. Wernig, and K. Plath A bivalent chromatin structure marks key developmental genes in embryonic stem cells Cell 125 2006 315 326
-
(2006)
Cell
, vol.125
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
Cuff, J.6
Fry, B.7
Meissner, A.8
Wernig, M.9
Plath, K.10
-
6
-
-
0036848010
-
Sequential activation of signaling pathways during innate immune responses in Drosophila
-
DOI 10.1016/S1534-5807(02)00325-8
-
M. Boutros, H. Agaisse, and N. Perrimon Sequential activation of signaling pathways during innate immune responses in Drosophila Dev. Cell 3 2002 711 722 (Pubitemid 35339488)
-
(2002)
Developmental Cell
, vol.3
, Issue.5
, pp. 711-722
-
-
Boutros, M.1
Agaisse, H.2
Perrimon, N.3
-
7
-
-
34548679613
-
Heterogeneous nuclear ribonuclear protein K interacts with Sindbis virus nonstructural proteins and viral subgenomic mRNA
-
DOI 10.1016/j.virol.2007.05.008, PII S0042682207003480
-
A.J. Burnham, L. Gong, and R.W. Hardy Heterogeneous nuclear ribonuclear protein K interacts with Sindbis virus nonstructural proteins and viral subgenomic mRNA Virology 367 2007 212 221 (Pubitemid 47418923)
-
(2007)
Virology
, vol.367
, Issue.1
, pp. 212-221
-
-
Burnham, A.J.1
Gong, L.2
Hardy, R.W.3
-
8
-
-
34548071028
-
A κB sequence code for pathway-specific innate immune responses
-
DOI 10.1038/sj.emboj.7601798, PII 7601798
-
M.S. Busse, C.P. Arnold, P. Towb, J. Katrivesis, and S.A. Wasserman A kappaB sequence code for pathway-specific innate immune responses EMBO J. 26 2007 3826 3835 (Pubitemid 47295870)
-
(2007)
EMBO Journal
, vol.26
, Issue.16
, pp. 3826-3835
-
-
Busse, M.S.1
Arnold, C.P.2
Towb, P.3
Katrivesis, J.4
Wasserman, S.A.5
-
9
-
-
69949139908
-
The transcriptional response of Drosophila melanogaster to infection with the sigma virus (Rhabdoviridae)
-
J. Carpenter, S. Hutter, J.F. Baines, J. Roller, S.S. Saminadin-Peter, J. Parsch, and F.M. Jiggins The transcriptional response of Drosophila melanogaster to infection with the sigma virus (Rhabdoviridae) PLoS One 4 2009 e6838
-
(2009)
PLoS One
, vol.4
, pp. 6838
-
-
Carpenter, J.1
Hutter, S.2
Baines, J.F.3
Roller, J.4
Saminadin-Peter, S.S.5
Parsch, J.6
Jiggins, F.M.7
-
10
-
-
67649292737
-
Unlocking the secrets of the genome
-
modENCODE Consortium
-
S.E. Celniker, L.A. Dillon, M.B. Gerstein, K.C. Gunsalus, S. Henikoff, G.H. Karpen, M. Kellis, E.C. Lai, J.D. Lieb, D.M. MacAlpine modENCODE Consortium Unlocking the secrets of the genome Nature 459 2009 927 930
-
(2009)
Nature
, vol.459
, pp. 927-930
-
-
Celniker, S.E.1
Dillon, L.A.2
Gerstein, M.B.3
Gunsalus, K.C.4
Henikoff, S.5
Karpen, G.H.6
Kellis, M.7
Lai, E.C.8
Lieb, J.D.9
MacAlpine, D.M.10
-
11
-
-
33747595430
-
Host-pathogen interactions in drosophila: New tricks from an old friend
-
DOI 10.1038/ni1388, PII NI1388
-
S. Cherry, and N. Silverman Host-pathogen interactions in Drosophila: new tricks from an old friend Nat. Immunol. 7 2006 911 917 (Pubitemid 44263904)
-
(2006)
Nature Immunology
, vol.7
, Issue.9
, pp. 911-917
-
-
Cherry, S.1
Silverman, N.2
-
12
-
-
13844250535
-
Genome-wide RNAi screen reveals a specific sensitivity of IRES-containing RNA viruses to host translation inhibition
-
DOI 10.1101/gad.1267905
-
S. Cherry, T. Doukas, S. Armknecht, S. Whelan, H. Wang, P. Sarnow, and N. Perrimon Genome-wide RNAi screen reveals a specific sensitivity of IRES-containing RNA viruses to host translation inhibition Genes Dev. 19 2005 445 452 (Pubitemid 40256276)
-
(2005)
Genes and Development
, vol.19
, Issue.4
, pp. 445-452
-
-
Cherry, S.1
Doukas, T.2
Armknecht, S.3
Whelan, S.4
Wang, H.5
Sarnow, P.6
Perrimon, N.7
-
13
-
-
44949256129
-
West Nile virus infection of Drosophila melanogaster induces a protective RNAi response
-
H.L. Chotkowski, A.T. Ciota, Y. Jia, F. Puig-Basagoiti, L.D. Kramer, P.Y. Shi, and R.L. Glaser West Nile virus infection of Drosophila melanogaster induces a protective RNAi response Virology 377 2008 197 206
-
(2008)
Virology
, vol.377
, pp. 197-206
-
-
Chotkowski, H.L.1
Ciota, A.T.2
Jia, Y.3
Puig-Basagoiti, F.4
Kramer, L.D.5
Shi, P.Y.6
Glaser, R.L.7
-
14
-
-
70449382807
-
The Imd pathway is involved in antiviral immune responses in Drosophila
-
A. Costa, E. Jan, P. Sarnow, and D. Schneider The Imd pathway is involved in antiviral immune responses in Drosophila PLoS One 4 2009 e7436
-
(2009)
PLoS One
, vol.4
, pp. 7436
-
-
Costa, A.1
Jan, E.2
Sarnow, P.3
Schneider, D.4
-
15
-
-
0037013856
-
The Toll and Imd pathways are the major regulators of the immune response in Drosophila
-
DOI 10.1093/emboj/21.11.2568
-
E. De Gregorio, P.T. Spellman, P. Tzou, G.M. Rubin, and B. Lemaitre The Toll and Imd pathways are the major regulators of the immune response in Drosophila EMBO J. 21 2002 2568 2579 (Pubitemid 34619373)
-
(2002)
EMBO Journal
, vol.21
, Issue.11
, pp. 2568-2579
-
-
De Gregorio, E.1
Spellman, P.T.2
Tzou, P.3
Rubin, G.M.4
Lemaitre, B.5
-
16
-
-
0023185975
-
Vesicular stomatitis virus in Drosophila melanogaster cells: Lack of leader RNA transport into the nuclei and frequent abortion of the replication step
-
S. Dezélée, D. Blondel, F. Wyers, and A.M. Petitjean Vesicular stomatitis virus in Drosophila melanogaster cells: lack of leader RNA transport into the nuclei and frequent abortion of the replication step J. Virol. 61 1987 1391 1397 (Pubitemid 17069725)
-
(1987)
Journal of Virology
, vol.61
, Issue.5
, pp. 1391-1397
-
-
Dezelee, S.1
Blondel, D.2
Wyers, F.3
Petitjean, A.M.4
-
17
-
-
24944485547
-
The Jak-STAT signaling pathway is required but not sufficient for the antiviral response of drosophila
-
DOI 10.1038/ni1237, PII N1237
-
C. Dostert, E. Jouanguy, P. Irving, L. Troxler, D. Galiana-Arnoux, C. Hetru, J.A. Hoffmann, and J.L. Imler The Jak-STAT signaling pathway is required but not sufficient for the antiviral response of Drosophila Nat. Immunol. 6 2005 946 953 (Pubitemid 43090450)
-
(2005)
Nature Immunology
, vol.6
, Issue.9
, pp. 946-953
-
-
Dostert, C.1
Jouanguy, E.2
Irving, P.3
Troxler, L.4
Galiana-Arnoux, D.5
Hetru, C.6
Hoffmann, J.A.7
Imler, J.-L.8
-
18
-
-
78751595020
-
Polycomb preferentially targets stalled promoters of coding and noncoding transcripts
-
D. Enderle, C. Beisel, M.B. Stadler, M. Gerstung, P. Athri, and R. Paro Polycomb preferentially targets stalled promoters of coding and noncoding transcripts Genome Res. 21 2011 216 226
-
(2011)
Genome Res.
, vol.21
, pp. 216-226
-
-
Enderle, D.1
Beisel, C.2
Stadler, M.B.3
Gerstung, M.4
Athri, P.5
Paro, R.6
-
19
-
-
35549006674
-
The Drosophila systemic immune response: Sensing and signalling during bacterial and fungal infections
-
DOI 10.1038/nri2194, PII NRI2194
-
D. Ferrandon, J.L. Imler, C. Hetru, and J.A. Hoffmann The Drosophila systemic immune response: sensing and signalling during bacterial and fungal infections Nat. Rev. Immunol. 7 2007 862 874 (Pubitemid 350006241)
-
(2007)
Nature Reviews Immunology
, vol.7
, Issue.11
, pp. 862-874
-
-
Ferrandon, D.1
Imler, J.-L.2
Hetru, C.3
Hoffmann, J.A.4
-
20
-
-
78649660536
-
Rift valley fever virus infection of human cells and insect hosts is promoted by protein kinase C epsilon
-
C.M. Filone, S.L. Hanna, M.C. Caino, S. Bambina, R.W. Doms, and S. Cherry Rift valley fever virus infection of human cells and insect hosts is promoted by protein kinase C epsilon PLoS One 5 2010 e15483
-
(2010)
PLoS One
, vol.5
, pp. 15483
-
-
Filone, C.M.1
Hanna, S.L.2
Caino, M.C.3
Bambina, S.4
Doms, R.W.5
Cherry, S.6
-
21
-
-
33646899303
-
Sorting out Toll Signals
-
DOI 10.1016/j.cell.2006.05.014, PII S0092867406006258
-
K.A. Fitzgerald, and Z.J. Chen Sorting out Toll signals Cell 125 2006 834 836 (Pubitemid 43795201)
-
(2006)
Cell
, vol.125
, Issue.5
, pp. 834-836
-
-
Fitzgerald, K.A.1
Chen, Z.J.2
-
22
-
-
33744494279
-
Essential function in vivo for Dicer-2 in host defense against RNA viruses in drosophila
-
DOI 10.1038/ni1335, PII N1335
-
D. Galiana-Arnoux, C. Dostert, A. Schneemann, J.A. Hoffmann, and J.L. Imler Essential function in vivo for Dicer-2 in host defense against RNA viruses in Drosophila Nat. Immunol. 7 2006 590 597 (Pubitemid 43797340)
-
(2006)
Nature Immunology
, vol.7
, Issue.6
, pp. 590-597
-
-
Galiana-Arnoux, D.1
Dostert, C.2
Schneemann, A.3
Hoffmann, J.A.4
Imler, J.-L.5
-
24
-
-
73949098573
-
Selective control of gene expression by CDK9 in human cells
-
J. Garriga, H. Xie, Z. Obradovic, and X. Graña Selective control of gene expression by CDK9 in human cells J. Cell. Physiol. 222 2010 200 208
-
(2010)
J. Cell. Physiol.
, vol.222
, pp. 200-208
-
-
Garriga, J.1
Xie, H.2
Obradovic, Z.3
Graña, X.4
-
25
-
-
47549090254
-
NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly
-
DOI 10.1101/gad.1643208
-
D.A. Gilchrist, S. Nechaev, C.H. Lee, S.K.B. Ghosh, J.B. Collins, L.P. Li, D.S. Gilmour, and K. Adelman NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly Genes Dev. 22 2008 1921 1933 (Pubitemid 352008640)
-
(2008)
Genes and Development
, vol.22
, Issue.14
, pp. 1921-1933
-
-
Gilchrist, D.A.1
Nechaev, S.2
Lee, C.3
Ghosh, S.K.B.4
Collins, J.B.5
Li, L.6
Gilmour, D.S.7
Adelman, K.8
-
26
-
-
78149477660
-
Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation
-
D.A. Gilchrist, G. Dos Santos, D.C. Fargo, B. Xie, Y. Gao, L. Li, and K. Adelman Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation Cell 143 2010 540 551
-
(2010)
Cell
, vol.143
, pp. 540-551
-
-
Gilchrist, D.A.1
Dos Santos, G.2
Fargo, D.C.3
Xie, B.4
Gao, Y.5
Li, L.6
Adelman, K.7
-
27
-
-
84860504575
-
Regulating the regulators: The pervasive effects of Pol II pausing on stimulus-responsive gene networks
-
D.A. Gilchrist, G. Fromm, G. dos Santos, L.N. Pham, I.E. McDaniel, A. Burkholder, D.C. Fargo, and K. Adelman Regulating the regulators: the pervasive effects of Pol II pausing on stimulus-responsive gene networks Genes Dev. 26 2012 933 944
-
(2012)
Genes Dev.
, vol.26
, pp. 933-944
-
-
Gilchrist, D.A.1
Fromm, G.2
Dos Santos, G.3
Pham, L.N.4
McDaniel, I.E.5
Burkholder, A.6
Fargo, D.C.7
Adelman, K.8
-
28
-
-
0022817308
-
RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells
-
D.S. Gilmour, and J.T. Lis RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells Mol. Cell. Biol. 6 1986 3984 3989
-
(1986)
Mol. Cell. Biol.
, vol.6
, pp. 3984-3989
-
-
Gilmour, D.S.1
Lis, J.T.2
-
29
-
-
0016775971
-
Morphogenesis of Sindbis virus in cultured Aedes albopictus cells
-
J.B. Gliedman, J.F. Smith, and D.T. Brown Morphogenesis of Sindbis virus in cultured Aedes albopictus cells J. Virol. 16 1975 913 926
-
(1975)
J. Virol.
, vol.16
, pp. 913-926
-
-
Gliedman, J.B.1
Smith, J.F.2
Brown, D.T.3
-
30
-
-
0037061450
-
The Drosophila immune response against Gram-negative bacteria is mediated by a peptidoglycan recognition protein
-
DOI 10.1038/nature734
-
M. Gottar, V. Gobert, T. Michel, M. Belvin, G. Duyk, J.A. Hoffmann, D. Ferrandon, and J. Royet The Drosophila immune response against Gram-negative bacteria is mediated by a peptidoglycan recognition protein Nature 416 2002 640 644 (Pubitemid 34406765)
-
(2002)
Nature
, vol.416
, Issue.6881
, pp. 640-644
-
-
Gottar, M.1
Gobert, V.2
Michel, T.3
Belvin, M.4
Duyk, G.5
Hoffmann, J.A.6
Ferrandon, D.7
Royet, J.8
-
31
-
-
34447098370
-
A Chromatin Landmark and Transcription Initiation at Most Promoters in Human Cells
-
DOI 10.1016/j.cell.2007.05.042, PII S0092867407006812
-
M.G. Guenther, S.S. Levine, L.A. Boyer, R. Jaenisch, and R.A. Young A chromatin landmark and transcription initiation at most promoters in human cells Cell 130 2007 77 88 (Pubitemid 47031323)
-
(2007)
Cell
, vol.130
, Issue.1
, pp. 77-88
-
-
Guenther, M.G.1
Levine, S.S.2
Boyer, L.A.3
Jaenisch, R.4
Young, R.A.5
-
32
-
-
67649648237
-
Control of inducible gene expression by signal-dependent transcriptional elongation
-
D.C. Hargreaves, T. Horng, and R. Medzhitov Control of inducible gene expression by signal-dependent transcriptional elongation Cell 138 2009 129 145
-
(2009)
Cell
, vol.138
, pp. 129-145
-
-
Hargreaves, D.C.1
Horng, T.2
Medzhitov, R.3
-
33
-
-
45949106240
-
Induction of host defence responses by Drosophila C virus
-
L.M. Hedges, and K.N. Johnson Induction of host defence responses by Drosophila C virus J. Gen. Virol. 89 2008 1497 1501
-
(2008)
J. Gen. Virol.
, vol.89
, pp. 1497-1501
-
-
Hedges, L.M.1
Johnson, K.N.2
-
34
-
-
0025769412
-
Primary response genes induced by growth factors and tumor promoters
-
H.R. Herschman Primary response genes induced by growth factors and tumor promoters Annu. Rev. Biochem. 60 1991 281 319
-
(1991)
Annu. Rev. Biochem.
, vol.60
, pp. 281-319
-
-
Herschman, H.R.1
-
35
-
-
0242581687
-
The immune response of Drosophila
-
DOI 10.1038/nature02021
-
J.A. Hoffmann The immune response of Drosophila Nature 426 2003 33 38 (Pubitemid 37432534)
-
(2003)
Nature
, vol.426
, Issue.6962
, pp. 33-38
-
-
Hoffmann, J.A.1
-
36
-
-
0037290892
-
Drosophila immunity: Paths and patterns
-
DOI 10.1016/S0952-7915(02)00005-5
-
D. Hultmark Drosophila immunity: paths and patterns Curr. Opin. Immunol. 15 2003 12 19 (Pubitemid 35454186)
-
(2003)
Current Opinion in Immunology
, vol.15
, Issue.1
, pp. 12-19
-
-
Hultmark, D.1
-
37
-
-
0035909905
-
A genome-wide analysis of immune responses in Drosophila
-
DOI 10.1073/pnas.261573998
-
P. Irving, L. Troxler, T.S. Heuer, M. Belvin, C. Kopczynski, J.M. Reichhart, J.A. Hoffmann, and C. Hetru A genome-wide analysis of immune responses in Drosophila Proc. Natl. Acad. Sci. USA 98 2001 15119 15124 (Pubitemid 34013979)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.26
, pp. 15119-15124
-
-
Irving, P.1
Troxler, L.2
Heuer, T.S.3
Belvin, M.4
Kopczynski, C.5
Reichhart, J.-M.6
Hoffmann, J.A.7
Hetru, C.8
-
38
-
-
10344257532
-
RNA interference acts as a natural antiviral response to O'nyong-nyong virus (Alphavirus; Togaviridae) infection of Anopheles gambiae
-
DOI 10.1073/pnas.0406983101
-
K.M. Keene, B.D. Foy, I. Sanchez-Vargas, B.J. Beaty, C.D. Blair, and K.E. Olson RNA interference acts as a natural antiviral response to O'nyong-nyong virus (Alphavirus; Togaviridae) infection of Anopheles gambiae Proc. Natl. Acad. Sci. USA 101 2004 17240 17245 (Pubitemid 39627804)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.49
, pp. 17240-17245
-
-
Keene, K.M.1
Foy, B.D.2
Sanchez-Vargas, I.3
Beaty, B.J.4
Blair, C.D.5
Olson, K.E.6
-
40
-
-
79953060951
-
Comprehensive analysis of the chromatin landscape in Drosophila melanogaster
-
P.V. Kharchenko, A.A. Alekseyenko, Y.B. Schwartz, A. Minoda, N.C. Riddle, J. Ernst, P.J. Sabo, E. Larschan, A.A. Gorchakov, and T. Gu Comprehensive analysis of the chromatin landscape in Drosophila melanogaster Nature 471 2011 480 485
-
(2011)
Nature
, vol.471
, pp. 480-485
-
-
Kharchenko, P.V.1
Alekseyenko, A.A.2
Schwartz, Y.B.3
Minoda, A.4
Riddle, N.C.5
Ernst, J.6
Sabo, P.J.7
Larschan, E.8
Gorchakov, A.A.9
Gu, T.10
-
41
-
-
34047268684
-
The host defense of Drosophila melanogaster
-
DOI 10.1146/annurev.immunol.25.022106.141615
-
B. Lemaitre, and J. Hoffmann The host defense of Drosophila melanogaster Annu. Rev. Immunol. 25 2007 697 743 (Pubitemid 46697922)
-
(2007)
Annual Review of Immunology
, vol.25
, pp. 697-743
-
-
Lemaitre, B.1
Hoffmann, J.2
-
42
-
-
0030595339
-
The dorsoventral regulatory gene cassette spatzle/Toll/Cactus controls the potent antifungal response in Drosophila adults
-
DOI 10.1016/S0092-8674(00)80172-5
-
B. Lemaitre, E. Nicolas, L. Michaut, J.M. Reichhart, and J.A. Hoffmann The dorsoventral regulatory gene cassette spätzle/Toll/cactus controls the potent antifungal response in Drosophila adults Cell 86 1996 973 983 (Pubitemid 26336801)
-
(1996)
Cell
, vol.86
, Issue.6
, pp. 973-983
-
-
Lemaitre, B.1
Nicolas, E.2
Michaut, L.3
Reichhart, J.-M.4
Hoffmann, J.A.5
-
43
-
-
0037123630
-
Induction and suppression of RNA silencing by an animal virus
-
DOI 10.1126/science.1070948
-
H. Li, W.X. Li, and S.W. Ding Induction and suppression of RNA silencing by an animal virus Science 296 2002 1319 1321 (Pubitemid 34522787)
-
(2002)
Science
, vol.296
, Issue.5571
, pp. 1319-1321
-
-
Li, H.1
Li, W.X.2
Ding, S.W.3
-
44
-
-
0036023960
-
Critical evaluation of the role of the Toll-like receptor 18-Wheeler in the host defense of Drosophila
-
P. Ligoxygakis, P. Bulet, and J.M. Reichhart Critical evaluation of the role of the Toll-like receptor 18-Wheeler in the host defense of Drosophila EMBO Rep. 3 2002 666 673
-
(2002)
EMBO Rep.
, vol.3
, pp. 666-673
-
-
Ligoxygakis, P.1
Bulet, P.2
Reichhart, J.M.3
-
45
-
-
70349443224
-
Transcriptional control of the inflammatory response
-
R. Medzhitov, and T. Horng Transcriptional control of the inflammatory response Nat. Rev. Immunol. 9 2009 692 703
-
(2009)
Nat. Rev. Immunol.
, vol.9
, pp. 692-703
-
-
Medzhitov, R.1
Horng, T.2
-
46
-
-
0035856990
-
Drosophila Toll is activated by Gram-positive bacteria through a circulating peptidoglycan recognition protein
-
DOI 10.1038/414756a
-
T. Michel, J.M. Reichhart, J.A. Hoffmann, and J. Royet Drosophila Toll is activated by Gram-positive bacteria through a circulating peptidoglycan recognition protein Nature 414 2001 756 759 (Pubitemid 34000773)
-
(2001)
Nature
, vol.414
, Issue.6865
, pp. 756-759
-
-
Michel, T.1
Relchhart, J.2
Hoffmann, J.A.3
Royet, J.4
-
47
-
-
77952241811
-
Insect response to alphavirus infection - Establishment of alphavirus persistence in insect cells involves inhibition of viral polyprotein cleavage
-
U. Mudiganti, R. Hernandez, and D.T. Brown Insect response to alphavirus infection - establishment of alphavirus persistence in insect cells involves inhibition of viral polyprotein cleavage Virus Res. 150 2010 73 84
-
(2010)
Virus Res.
, vol.150
, pp. 73-84
-
-
Mudiganti, U.1
Hernandez, R.2
Brown, D.T.3
-
48
-
-
78650587738
-
RNAi-mediated immunity provides strong protection against the negative-strand RNA vesicular stomatitis virus in Drosophila
-
S. Mueller, V. Gausson, N. Vodovar, S. Deddouche, L. Troxler, J. Perot, S. Pfeffer, J.A. Hoffmann, M.C. Saleh, and J.L. Imler RNAi-mediated immunity provides strong protection against the negative-strand RNA vesicular stomatitis virus in Drosophila Proc. Natl. Acad. Sci. USA 107 2010 19390 19395
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 19390-19395
-
-
Mueller, S.1
Gausson, V.2
Vodovar, N.3
Deddouche, S.4
Troxler, L.5
Perot, J.6
Pfeffer, S.7
Hoffmann, J.A.8
Saleh, M.C.9
Imler, J.L.10
-
49
-
-
36549061004
-
RNA polymerase is poised for activation across the genome
-
DOI 10.1038/ng.2007.21, PII NG200721
-
G.W. Muse, D.A. Gilchrist, S. Nechaev, R. Shah, J.S. Parker, S.F. Grissom, J. Zeitlinger, and K. Adelman RNA polymerase is poised for activation across the genome Nat. Genet. 39 2007 1507 1511 (Pubitemid 350191341)
-
(2007)
Nature Genetics
, vol.39
, Issue.12
, pp. 1507-1511
-
-
Muse, G.W.1
Gilchrist, D.A.2
Nechaev, S.3
Shah, R.4
Parker, J.S.5
Grissom, S.F.6
Zeitlinger, J.7
Adelman, K.8
-
50
-
-
84859991798
-
Virus recognition by Toll-7 activates antiviral autophagy in Drosophila
-
M. Nakamoto, R.H. Moy, J. Xu, S. Bambina, A. Yasunaga, S.S. Shelly, B. Gold, and S. Cherry Virus recognition by Toll-7 activates antiviral autophagy in Drosophila Immunity 36 2012 658 667
-
(2012)
Immunity
, vol.36
, pp. 658-667
-
-
Nakamoto, M.1
Moy, R.H.2
Xu, J.3
Bambina, S.4
Yasunaga, A.5
Shelly, S.S.6
Gold, B.7
Cherry, S.8
-
51
-
-
78650566210
-
Pol II waiting in the starting gates: Regulating the transition from transcription initiation into productive elongation
-
S. Nechaev, and K. Adelman Pol II waiting in the starting gates: regulating the transition from transcription initiation into productive elongation Biochim. Biophys. Acta 1809 2011 34 45
-
(2011)
Biochim. Biophys. Acta
, vol.1809
, pp. 34-45
-
-
Nechaev, S.1
Adelman, K.2
-
52
-
-
74549132843
-
Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila
-
S. Nechaev, D.C. Fargo, G. dos Santos, L. Liu, Y. Gao, and K. Adelman Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila Science 327 2010 335 338
-
(2010)
Science
, vol.327
, pp. 335-338
-
-
Nechaev, S.1
Fargo, D.C.2
Dos Santos, G.3
Liu, L.4
Gao, Y.5
Adelman, K.6
-
53
-
-
36348932146
-
Microarray analyses reveal distinct roles for Rel proteins in the Drosophila immune response
-
DOI 10.1016/j.dci.2007.04.001, PII S0145305X07000705
-
S. Pal, J. Wu, and L.P. Wu Microarray analyses reveal distinct roles for Rel proteins in the Drosophila immune response Dev. Comp. Immunol. 32 2008 50 60 (Pubitemid 350160915)
-
(2008)
Developmental and Comparative Immunology
, vol.32
, Issue.1
, pp. 50-60
-
-
Pal, S.1
Wu, J.2
Wu, L.P.3
-
54
-
-
77649342030
-
The Toll immune signaling pathway control conserved anti-dengue defenses across diverse Ae. aegypti strains and against multiple dengue virus serotypes
-
J.L. Ramirez, and G. Dimopoulos The Toll immune signaling pathway control conserved anti-dengue defenses across diverse Ae. aegypti strains and against multiple dengue virus serotypes Dev. Comp. Immunol. 34 2010 625 629
-
(2010)
Dev. Comp. Immunol.
, vol.34
, pp. 625-629
-
-
Ramirez, J.L.1
Dimopoulos, G.2
-
55
-
-
67649669255
-
A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling
-
V.R. Ramirez-Carrozzi, D. Braas, D.M. Bhatt, C.S. Cheng, C. Hong, K.R. Doty, J.C. Black, A. Hoffmann, M. Carey, and S.T. Smale A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling Cell 138 2009 114 128
-
(2009)
Cell
, vol.138
, pp. 114-128
-
-
Ramirez-Carrozzi, V.R.1
Braas, D.2
Bhatt, D.M.3
Cheng, C.S.4
Hong, C.5
Doty, K.R.6
Black, J.C.7
Hoffmann, A.8
Carey, M.9
Smale, S.T.10
-
56
-
-
29744444477
-
A vesicular stomatitis virus recombinant expressing granulocyte- macrophage colony-stimulating factor induces enhanced T-cell responses and is highly attenuated for replication in animals
-
DOI 10.1128/JVI.79.24.15043-15053.2005
-
E. Ramsburg, J. Publicover, L. Buonocore, A. Poholek, M. Robek, A. Palin, and J.K. Rose A vesicular stomatitis virus recombinant expressing granulocyte-macrophage colony-stimulating factor induces enhanced T-cell responses and is highly attenuated for replication in animals J. Virol. 79 2005 15043 15053 (Pubitemid 43032286)
-
(2005)
Journal of Virology
, vol.79
, Issue.24
, pp. 15043-15053
-
-
Ramsburg, E.1
Publicover, J.2
Buonocore, L.3
Poholek, A.4
Robek, M.5
Palin, A.6
Rose, J.K.7
-
57
-
-
0029163040
-
Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing
-
E.B. Rasmussen, and J.T. Lis Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing J. Mol. Biol. 252 1995 522 535
-
(1995)
J. Mol. Biol.
, vol.252
, pp. 522-535
-
-
Rasmussen, E.B.1
Lis, J.T.2
-
58
-
-
14544280757
-
Transcriptional regulation and the role of diverse coactivators in animal cells
-
DOI 10.1016/j.febslet.2004.12.007
-
R.G. Roeder Transcriptional regulation and the role of diverse coactivators in animal cells FEBS Lett. 579 2005 909 915 (Pubitemid 40361864)
-
(2005)
FEBS Letters
, vol.579
, Issue.4 SPEC. ISSUE
, pp. 909-915
-
-
Roeder, R.G.1
-
59
-
-
80051881398
-
Natural resistance-associated macrophage protein is a cellular receptor for sindbis virus in both insect and mammalian hosts
-
P.P. Rose, S.L. Hanna, A. Spiridigliozzi, N. Wannissorn, D.P. Beiting, S.R. Ross, R.W. Hardy, S.A. Bambina, M.T. Heise, and S. Cherry Natural resistance-associated macrophage protein is a cellular receptor for sindbis virus in both insect and mammalian hosts Cell Host Microbe 10 2011 97 104
-
(2011)
Cell Host Microbe
, vol.10
, pp. 97-104
-
-
Rose, P.P.1
Hanna, S.L.2
Spiridigliozzi, A.3
Wannissorn, N.4
Beiting, D.P.5
Ross, S.R.6
Hardy, R.W.7
Bambina, S.A.8
Heise, M.T.9
Cherry, S.10
-
60
-
-
1642446004
-
Parasite-specific immune response in adult Drosophila melanogaster: A genomic study
-
DOI 10.1038/sj.embor.7400073
-
K. Roxström-Lindquist, O. Terenius, and I. Faye Parasite-specific immune response in adult Drosophila melanogaster: a genomic study EMBO Rep. 5 2004 207 212 (Pubitemid 38401203)
-
(2004)
EMBO Reports
, vol.5
, Issue.2
, pp. 207-212
-
-
Roxstrom-Lindquist, K.1
Terenius, O.2
Faye, I.3
-
61
-
-
67650638926
-
Ars2 regulates both miRNA- and siRNA- dependent silencing and suppresses RNA virus infection in Drosophila
-
L.R. Sabin, R. Zhou, J.J. Gruber, N. Lukinova, S. Bambina, A. Berman, C.K. Lau, C.B. Thompson, and S. Cherry Ars2 regulates both miRNA- and siRNA- dependent silencing and suppresses RNA virus infection in Drosophila Cell 138 2009 340 351
-
(2009)
Cell
, vol.138
, pp. 340-351
-
-
Sabin, L.R.1
Zhou, R.2
Gruber, J.J.3
Lukinova, N.4
Bambina, S.5
Berman, A.6
Lau, C.K.7
Thompson, C.B.8
Cherry, S.9
-
64
-
-
64049114864
-
Autophagy is an essential component of Drosophila immunity against vesicular stomatitis virus
-
S. Shelly, N. Lukinova, S. Bambina, A. Berman, and S. Cherry Autophagy is an essential component of Drosophila immunity against vesicular stomatitis virus Immunity 30 2009 588 598
-
(2009)
Immunity
, vol.30
, pp. 588-598
-
-
Shelly, S.1
Lukinova, N.2
Bambina, S.3
Berman, A.4
Cherry, S.5
-
65
-
-
5444225805
-
Elongation by RNA polymerase II: The short and long of it
-
DOI 10.1101/gad.1235904
-
R.J. Sims 3rd, R. Belotserkovskaya, and D. Reinberg Elongation by RNA polymerase II: the short and long of it Genes Dev. 18 2004 2437 2468 (Pubitemid 39362887)
-
(2004)
Genes and Development
, vol.18
, Issue.20
, pp. 2437-2468
-
-
Sims III, R.J.1
Belotserkovskaya, R.2
Reinberg, D.3
-
66
-
-
77949971595
-
Selective transcription in response to an inflammatory stimulus
-
S.T. Smale Selective transcription in response to an inflammatory stimulus Cell 140 2010 833 844
-
(2010)
Cell
, vol.140
, pp. 833-844
-
-
Smale, S.T.1
-
67
-
-
70449577158
-
An evolutionary conserved function of the JAK-STAT pathway in anti-dengue defense
-
J.A. Souza-Neto, S. Sim, and G. Dimopoulos An evolutionary conserved function of the JAK-STAT pathway in anti-dengue defense Proc. Natl. Acad. Sci. USA 106 2009 17841 17846
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 17841-17846
-
-
Souza-Neto, J.A.1
Sim, S.2
Dimopoulos, G.3
-
68
-
-
77949901729
-
Human negative elongation factor activates transcription and regulates alternative transcription initiation
-
J. Sun, and R. Li Human negative elongation factor activates transcription and regulates alternative transcription initiation J. Biol. Chem. 285 2010 6443 6452
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 6443-6452
-
-
Sun, J.1
Li, R.2
-
69
-
-
44249115077
-
Drosophila melanogaster mounts a unique immune response to the rhabdovirus Sigma virus
-
DOI 10.1128/AEM.02248-07
-
C.W. Tsai, E.A. McGraw, E.D. Ammar, R.G. Dietzgen, and S.A. Hogenhout Drosophila melanogaster mounts a unique immune response to the Rhabdovirus sigma virus Appl. Environ. Microbiol. 74 2008 3251 3256 (Pubitemid 351747031)
-
(2008)
Applied and Environmental Microbiology
, vol.74
, Issue.10
, pp. 3251-3256
-
-
Tsai, C.W.1
McGraw, E.A.2
Ammar, E.-D.3
Dietzgen, R.G.4
Hogenhout, S.A.5
-
70
-
-
34247627984
-
Transcription elongation controls cell fate specification in the Drosophila embryo
-
DOI 10.1101/gad.1521207
-
X. Wang, C. Lee, D.S. Gilmour, and J.P. Gergen Transcription elongation controls cell fate specification in the Drosophila embryo Genes Dev. 21 2007 1031 1036 (Pubitemid 46686472)
-
(2007)
Genes and Development
, vol.21
, Issue.9
, pp. 1031-1036
-
-
Wang, X.1
Lee, C.2
Gilmour, D.S.3
Gergen, J.P.4
-
71
-
-
77955367829
-
NELF potentiates gene transcription in the Drosophila embryo
-
X. Wang, S. Hang, L. Prazak, and J.P. Gergen NELF potentiates gene transcription in the Drosophila embryo PLoS One 5 2010 e11498
-
(2010)
PLoS One
, vol.5
, pp. 11498
-
-
Wang, X.1
Hang, S.2
Prazak, L.3
Gergen, J.P.4
-
72
-
-
33645979325
-
RNA interference directs innate immunity against viruses in adult Drosophila
-
X.H. Wang, R. Aliyari, W.X. Li, H.W. Li, K. Kim, R. Carthew, P. Atkinson, and S.W. Ding RNA interference directs innate immunity against viruses in adult Drosophila Science 312 2006 452 454
-
(2006)
Science
, vol.312
, pp. 452-454
-
-
Wang, X.H.1
Aliyari, R.2
Li, W.X.3
Li, H.W.4
Kim, K.5
Carthew, R.6
Atkinson, P.7
Ding, S.W.8
-
73
-
-
2442675276
-
Nature's fortress against infection
-
S.A. Wasserman Nature's fortress against infection Nat. Immunol. 5 2004 474 475
-
(2004)
Nat. Immunol.
, vol.5
, pp. 474-475
-
-
Wasserman, S.A.1
-
74
-
-
4844225284
-
Transmission cycles, host range, evolution and emergence of arboviral disease
-
DOI 10.1038/nrmicro1006
-
S.C. Weaver, and A.D. Barrett Transmission cycles, host range, evolution and emergence of arboviral disease Nat. Rev. Microbiol. 2 2004 789 801 (Pubitemid 39317460)
-
(2004)
Nature Reviews Microbiology
, vol.2
, Issue.10
, pp. 789-801
-
-
Weaver, S.C.1
Barrett, A.D.T.2
-
75
-
-
0030663332
-
The 18-wheeler mutation reveals complex antibacterial gene regulation in Drosophila host defense
-
DOI 10.1093/emboj/16.20.6120
-
M.J. Williams, A. Rodriguez, D.A. Kimbrell, and E.D. Eldon The 18-wheeler mutation reveals complex antibacterial gene regulation in Drosophila host defense EMBO J. 16 1997 6120 6130 (Pubitemid 27458332)
-
(1997)
EMBO Journal
, vol.16
, Issue.20
, pp. 6120-6130
-
-
Williams, M.J.1
Rodriguez, A.2
Kimbrell, D.A.3
Eldon, E.D.4
-
76
-
-
0037609009
-
NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila
-
C.H. Wu, Y. Yamaguchi, L.R. Benjamin, M. Horvat-Gordon, J. Washinsky, E. Enerly, J. Larsson, A. Lambertsson, H. Handa, and D. Gilmour NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila Genes Dev. 17 2003 1402 1414 (Pubitemid 36666009)
-
(2003)
Genes and Development
, vol.17
, Issue.11
, pp. 1402-1414
-
-
Wu, C.-H.1
Yamaguchi, Y.2
Benjamin, L.R.3
Horvat-Gordon, M.4
Washinsky, J.5
Enerly, E.6
Larsson, J.7
Lambertsson, A.8
Handa, H.9
Gilmour, D.10
-
77
-
-
0017102421
-
Steroid receptors: Elements for modulation of eukaryotic transcription
-
K.R. Yamamoto, and B.M. Alberts Steroid receptors: elements for modulation of eukaryotic transcription Annu. Rev. Biochem. 45 1976 721 746
-
(1976)
Annu. Rev. Biochem.
, vol.45
, pp. 721-746
-
-
Yamamoto, K.R.1
Alberts, B.M.2
-
78
-
-
3142581432
-
Regulation of Toll/IL-1-receptor-mediated gene expression by the inducible nuclear protein IκBζ
-
DOI 10.1038/nature02738
-
M. Yamamoto, S. Yamazaki, S. Uematsu, S. Sato, H. Hemmi, K. Hoshino, T. Kaisho, H. Kuwata, O. Takeuchi, and K. Takeshige Regulation of Toll/IL-1-receptor-mediated gene expression by the inducible nuclear protein IkappaBzeta Nature 430 2004 218 222 (Pubitemid 38902431)
-
(2004)
Nature
, vol.430
, Issue.6996
, pp. 218-222
-
-
Yamamoto, M.1
Yamazaki, S.2
Uematsu, S.3
Sato, S.4
Hemmmi, H.5
Hoshino, K.6
Kaisho, T.7
Kuwata, H.8
Takeuchi, O.9
Takeshige, K.10
Saitoh, T.11
Yamaoka, S.12
Yamamoto, N.13
Yamamoto, S.14
Muta, T.15
Takeda, K.16
Akira, S.17
-
79
-
-
52149093714
-
Cyclin T1-dependent genes in activated CD4 T and macrophage cell lines appear enriched in HIV-1 co-factors
-
W. Yu, R. Ramakrishnan, Y. Wang, K. Chiang, T.L. Sung, and A.P. Rice Cyclin T1-dependent genes in activated CD4 T and macrophage cell lines appear enriched in HIV-1 co-factors PLoS One 3 2008 e3146
-
(2008)
PLoS One
, vol.3
, pp. 3146
-
-
Yu, W.1
Ramakrishnan, R.2
Wang, Y.3
Chiang, K.4
Sung, T.L.5
Rice, A.P.6
-
80
-
-
18844411853
-
The Toll pathway is important for an antiviral response in Drosophila
-
DOI 10.1073/pnas.0409181102
-
R.A. Zambon, M. Nandakumar, V.N. Vakharia, and L.P. Wu The Toll pathway is important for an antiviral response in Drosophila Proc. Natl. Acad. Sci. USA 102 2005 7257 7262 (Pubitemid 40696366)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.20
, pp. 7257-7262
-
-
Zambon, R.A.1
Nandakumar, M.2
Vakharia, V.W.3
Wu, L.P.4
-
81
-
-
33645537549
-
RNAi is an antiviral immune response against a dsRNA virus in Drosophila melanogaster
-
R.A. Zambon, V.N. Vakharia, and L.P. Wu RNAi is an antiviral immune response against a dsRNA virus in Drosophila melanogaster Cell. Microbiol. 8 2006 880 889
-
(2006)
Cell. Microbiol.
, vol.8
, pp. 880-889
-
-
Zambon, R.A.1
Vakharia, V.N.2
Wu, L.P.3
-
82
-
-
36549013619
-
RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo
-
DOI 10.1038/ng.2007.26, PII NG200726
-
J. Zeitlinger, A. Stark, M. Kellis, J.W. Hong, S. Nechaev, K. Adelman, M. Levine, and R.A. Young RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo Nat. Genet. 39 2007 1512 1516 (Pubitemid 350191345)
-
(2007)
Nature Genetics
, vol.39
, Issue.12
, pp. 1512-1516
-
-
Zeitlinger, J.1
Stark, A.2
Kellis, M.3
Hong, J.-W.4
Nechaev, S.5
Adelman, K.6
Levine, M.7
Young, R.A.8
|