-
1
-
-
55049118167
-
Artificial inoculation on plants and banana leaf pieces with Mycosphaerella spp., responsible for Sigatoka leaf spot diseases
-
Abadie C, Zapater MF, Pignolet L, Carlier J, Mourichon X (2008) Artificial inoculation on plants and banana leaf pieces with Mycosphaerella spp., responsible for Sigatoka leaf spot diseases. Fruits 63(5): 319-323.
-
(2008)
Fruits
, vol.63
, Issue.5
, pp. 319-323
-
-
Abadie, C.1
Zapater, M.F.2
Pignolet, L.3
Carlier, J.4
Mourichon, X.5
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215(3): 403-410.
-
(1990)
J Mol Biol
, vol.215
, Issue.3
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
3442876969
-
Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
-
Andersen CL, Jensen JL, Orntoft TF (2004) Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 64(15): 5245-5250.
-
(2004)
Cancer Res
, vol.64
, Issue.15
, pp. 5245-5250
-
-
Andersen, C.L.1
Jensen, J.L.2
Orntoft, T.F.3
-
4
-
-
77954588784
-
Identification and evaluation of new reference genes in Gossypium hirsutum for accurate normalization of real-time quantitative RT-PCR data
-
Artico S, Nardeli SM, Brilhante O, Grossi-de-Sa MF, Alves-Ferreira M (2010) Identification and evaluation of new reference genes in Gossypium hirsutum for accurate normalization of real-time quantitative RT-PCR data. BMC Plant Biol 10: 49.
-
(2010)
BMC Plant Biol
, vol.10
, pp. 49
-
-
Artico, S.1
Nardeli, S.M.2
Brilhante, O.3
Grossi-De-Sa, M.F.4
Alves-Ferreira, M.5
-
5
-
-
58849120561
-
Identification of suitable internal control genes for expression studies in Coffea arabica under different experimental conditions
-
Barsalobres-Cavallari CF, Severino FE, Maluf MP, Maia IG (2009) Identification of suitable internal control genes for expression studies in Coffea arabica under different experimental conditions. BMC Mol Biol 10: 1.
-
(2009)
BMC Mol Biol
, vol.10
, pp. 1
-
-
Barsalobres-Cavallari, C.F.1
Severino, F.E.2
Maluf, M.P.3
Maia, I.G.4
-
6
-
-
5444258598
-
Validating internal controls for quantitative plant gene expression studies
-
Brunner AM, Yakovlev IA, Strauss SH (2004) Validating internal controls for quantitative plant gene expression studies. BMC Plant Biol 4: 14.
-
(2004)
BMC Plant Biol
, vol.4
, pp. 14
-
-
Brunner, A.M.1
Yakovlev, I.A.2
Strauss, S.H.3
-
7
-
-
0036668567
-
Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems
-
Bustin SA (2002) Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. J Mol Endocrinol 29(1): 23-39.
-
(2002)
J Mol Endocrinol
, vol.29
, Issue.1
, pp. 23-39
-
-
Bustin, S.A.1
-
8
-
-
43149109490
-
Functional genomics in a non-model crop: transcriptomics or proteomics?
-
Carpentier SC, Coemans B, Podevin N, Laukens K, Witters E, Matsumura H, Terauchi R, Swennen R, Panis B (2008) Functional genomics in a non-model crop: transcriptomics or proteomics? Physiol Plant 133(2): 117-130.
-
(2008)
Physiol Plant
, vol.133
, Issue.2
, pp. 117-130
-
-
Carpentier, S.C.1
Coemans, B.2
Podevin, N.3
Laukens, K.4
Witters, E.5
Matsumura, H.6
Terauchi, R.7
Swennen, R.8
Panis, B.9
-
9
-
-
84855527090
-
Selection of reference genes for expression studies in Cicer arietinum L.: analysis of cyp81E3 gene expression against Ascochyta rabiei
-
doi: 10. 1007/s11032-11010-19544-11038
-
Castro P, Román B, Rubio J, Die J (2011) Selection of reference genes for expression studies in Cicer arietinum L.: analysis of cyp81E3 gene expression against Ascochyta rabiei. Mol Breed 27. doi: 10. 1007/s11032-11010-19544-11038.
-
(2011)
Mol Breed
, vol.27
-
-
Castro, P.1
Román, B.2
Rubio, J.3
Die, J.4
-
10
-
-
85027928183
-
Validation of reference genes for RT-qPCR studies of gene expression in banana fruit under different experimental conditions
-
Chen L, H-y Zhong, J-f Kuang, Li J-g, Lu W-j, Chen J-y (2011) Validation of reference genes for RT-qPCR studies of gene expression in banana fruit under different experimental conditions. Planta 234(2): 377-390.
-
(2011)
Planta
, vol.234
, Issue.2
, pp. 377-390
-
-
Chen, L.1
Zhong, H.-y.2
Kuang, J.-f.3
Li J.-g4
Lu, W.-j.5
Chen, J.-y.6
-
11
-
-
26444504963
-
SuperSAGE combined with PCR walking allows global gene expression profiling of banana (Musa acuminata), a non-model organism
-
Coemans B, Matsumura H, Terauchi R, Remy S, Swennen R, Sagi L (2005) SuperSAGE combined with PCR walking allows global gene expression profiling of banana (Musa acuminata), a non-model organism. Theor Appl Genet 111(6): 1118-1126.
-
(2005)
Theor Appl Genet
, vol.111
, Issue.6
, pp. 1118-1126
-
-
Coemans, B.1
Matsumura, H.2
Terauchi, R.3
Remy, S.4
Swennen, R.5
Sagi, L.6
-
12
-
-
78650513229
-
Selection of reference genes in Hedysarum coronarium under various stresses and stages of development
-
Cordoba EM, Die JV, Gonzalez-Verdejo CI, Nadal S, Roman B (2011) Selection of reference genes in Hedysarum coronarium under various stresses and stages of development. Anal Biochem 409(2): 236-243.
-
(2011)
Anal Biochem
, vol.409
, Issue.2
, pp. 236-243
-
-
Cordoba, E.M.1
Die, J.V.2
Gonzalez-Verdejo, C.I.3
Nadal, S.4
Roman, B.5
-
13
-
-
63949087857
-
Evaluation of coffee reference genes for relative expression studies by quantitative real-time RT-PCR
-
Cruz F, Kalaoun S, Nobile P, Colombo C, Almeida J, Barros LMG, Romano E, Grossi-de-Sa MF, Vaslin M, Alves-Ferreira M (2009) Evaluation of coffee reference genes for relative expression studies by quantitative real-time RT-PCR. Mol Breed 23(4): 607-616.
-
(2009)
Mol Breed
, vol.23
, Issue.4
, pp. 607-616
-
-
Cruz, F.1
Kalaoun, S.2
Nobile, P.3
Colombo, C.4
Almeida, J.5
Barros, L.M.G.6
Romano, E.7
Grossi-De-Sa, M.F.8
Vaslin, M.9
Alves-Ferreira, M.10
-
14
-
-
32644481938
-
Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis
-
Czechowski T, Stitt M, Altmann T, Udvardi MK, Scheible WR (2005) Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol 139(1): 5-17.
-
(2005)
Plant Physiol
, vol.139
, Issue.1
, pp. 5-17
-
-
Czechowski, T.1
Stitt, M.2
Altmann, T.3
Udvardi, M.K.4
Scheible, W.R.5
-
15
-
-
34547750807
-
Real-time PCR: revolutionizing detection and expression analysis of genes
-
Deepak SA, Kottapalli KR, Rakwal R, Oros G, Rangappa KS, Iwahashi H, Masuo Y, Agrawal GK (2007) Real-time PCR: revolutionizing detection and expression analysis of genes. Curr Genomics 8(4): 234-251.
-
(2007)
Curr Genomics
, vol.8
, Issue.4
, pp. 234-251
-
-
Deepak, S.A.1
Kottapalli, K.R.2
Rakwal, R.3
Oros, G.4
Rangappa, K.S.5
Iwahashi, H.6
Masuo, Y.7
Agrawal, G.K.8
-
16
-
-
77649235913
-
How to do successful gene expression analysis using real-time PCR
-
Derveaux S, Vandesompele J, Hellemans J (2010) How to do successful gene expression analysis using real-time PCR. Methods 50(4): 227-230.
-
(2010)
Methods
, vol.50
, Issue.4
, pp. 227-230
-
-
Derveaux, S.1
Vandesompele, J.2
Hellemans, J.3
-
17
-
-
27644563899
-
The implications of using an inappropriate reference gene for real-time reverse transcription PCR data normalization
-
Dheda K, Huggett JF, Chang JS, Kim LU, Bustin SA, Johnson MA, Rook GA, Zumla A (2005) The implications of using an inappropriate reference gene for real-time reverse transcription PCR data normalization. Anal Biochem 344(1): 141-143.
-
(2005)
Anal Biochem
, vol.344
, Issue.1
, pp. 141-143
-
-
Dheda, K.1
Huggett, J.F.2
Chang, J.S.3
Kim, L.U.4
Bustin, S.A.5
Johnson, M.A.6
Rook, G.A.7
Zumla, A.8
-
18
-
-
77952553024
-
Evaluation of candidate reference genes for expression studies in Pisum sativum under different experimental conditions
-
Die JV, Roman B, Nadal S, Gonzalez-Verdejo CI (2010) Evaluation of candidate reference genes for expression studies in Pisum sativum under different experimental conditions. Planta 232(1): 145-153.
-
(2010)
Planta
, vol.232
, Issue.1
, pp. 145-153
-
-
Die, J.V.1
Roman, B.2
Nadal, S.3
Gonzalez-Verdejo, C.I.4
-
19
-
-
58749110475
-
Evaluation of reference genes for quantitative RT-PCR in Lolium temulentum under abiotic stress
-
Dombrowski JE, Martin RC (2009) Evaluation of reference genes for quantitative RT-PCR in Lolium temulentum under abiotic stress. Plant Sci 176(3): 390-396.
-
(2009)
Plant Sci
, vol.176
, Issue.3
, pp. 390-396
-
-
Dombrowski, J.E.1
Martin, R.C.2
-
20
-
-
81355134083
-
Validation and application of reference genes for quantitative gene expression analyses in various tissues of Bupleurum chinense
-
Dong L, Sui C, Liu Y, Yang Y, Wei J, Yang Y (2011) Validation and application of reference genes for quantitative gene expression analyses in various tissues of Bupleurum chinense. Mol Biol Rep 38(8): 5017-5023.
-
(2011)
Mol Biol Rep
, vol.38
, Issue.8
, pp. 5017-5023
-
-
Dong, L.1
Sui, C.2
Liu, Y.3
Yang, Y.4
Wei, J.5
Yang, Y.6
-
21
-
-
77949395569
-
The regulation of MADS-box gene expression during ripening of banana and their regulatory interaction with ethylene
-
Elitzur T, Vrebalov J, Giovannoni JJ, Goldschmidt EE, Friedman H (2010) The regulation of MADS-box gene expression during ripening of banana and their regulatory interaction with ethylene. J Exp Bot 61(5): 1523-1535.
-
(2010)
J Exp Bot
, vol.61
, Issue.5
, pp. 1523-1535
-
-
Elitzur, T.1
Vrebalov, J.2
Giovannoni, J.J.3
Goldschmidt, E.E.4
Friedman, H.5
-
22
-
-
58549086530
-
Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process
-
Exposito-Rodriguez M, Borges AA, Borges-Perez A, Perez JA (2008) Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process. BMC Plant Biol 8: 131.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 131
-
-
Exposito-Rodriguez, M.1
Borges, A.A.2
Borges-Perez, A.3
Perez, J.A.4
-
23
-
-
85184290205
-
-
FAO. Accessed 27 Nov 2011
-
FAO (2009) FAOSTAT http://faostat. fao. org. Accessed 27 Nov 2011.
-
(2009)
FAOSTAT
-
-
-
24
-
-
3242732345
-
Real-time PCR: what relevance to plant studies?
-
Gachon C, Mingam A, Charrier B (2004) Real-time PCR: what relevance to plant studies? J Exp Bot 55(402): 1445-1454.
-
(2004)
J Exp Bot
, vol.55
, Issue.402
, pp. 1445-1454
-
-
Gachon, C.1
Mingam, A.2
Charrier, B.3
-
25
-
-
77952745995
-
Validation of internal control genes for quantitative gene expression studies in chickpea (Cicer arietinum L.)
-
Garg R, Sahoo A, Tyagi AK, Jain M (2010) Validation of internal control genes for quantitative gene expression studies in chickpea (Cicer arietinum L.). Biochem Biophys Res Commun 396(2): 283-288.
-
(2010)
Biochem Biophys Res Commun
, vol.396
, Issue.2
, pp. 283-288
-
-
Garg, R.1
Sahoo, A.2
Tyagi, A.K.3
Jain, M.4
-
26
-
-
85184298014
-
-
Global Musa Genomics Consortium. Accessed 13 Feb 2011
-
Global Musa Genomics Consortium (2011) www. musagenomics. org. Accessed 13 Feb 2011.
-
(2011)
-
-
-
27
-
-
26644438574
-
Evaluation of control transcripts in real-time RT-PCR expression analysis during maritime pine embryogenesis
-
Goncalves S, Cairney J, Maroco J, Oliveira MM, Miguel C (2005) Evaluation of control transcripts in real-time RT-PCR expression analysis during maritime pine embryogenesis. Planta 222(3): 556-563.
-
(2005)
Planta
, vol.222
, Issue.3
, pp. 556-563
-
-
Goncalves, S.1
Cairney, J.2
Maroco, J.3
Oliveira, M.M.4
Miguel, C.5
-
28
-
-
79960869920
-
A guideline to family-wide comparative state-of-the-art quantitative RT-PCR analysis exemplified with a Brassicaceae cross-species seed germination case study
-
Graeber K, Linkies A, Wood ATA, Leubner-Metzger G (2011) A guideline to family-wide comparative state-of-the-art quantitative RT-PCR analysis exemplified with a Brassicaceae cross-species seed germination case study. Plant Cell 23(6): 2045-2063.
-
(2011)
Plant Cell
, vol.23
, Issue.6
, pp. 2045-2063
-
-
Graeber, K.1
Linkies, A.2
Wood, A.T.A.3
Leubner-Metzger, G.4
-
29
-
-
67650930085
-
Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references
-
Guenin S, Mauriat M, Pelloux J, van Wuytswinkel O, Bellini C, Gutierrez L (2009) Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references. J Exp Bot 60(2): 487-493.
-
(2009)
J Exp Bot
, vol.60
, Issue.2
, pp. 487-493
-
-
Guenin, S.1
Mauriat, M.2
Pelloux, J.3
van Wuytswinkel, O.4
Bellini, C.5
Gutierrez, L.6
-
30
-
-
47249141242
-
The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants
-
Gutierrez L, Mauriat M, Guenin S, Pelloux J, Lefebvre JF, Louvet R, Rusterucci C, Moritz T, Guerineau F, Bellini C, van Wuytswinkel O (2008a) The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants. Plant Biotechnol J 6(6): 609-618.
-
(2008)
Plant Biotechnol J
, vol.6
, Issue.6
, pp. 609-618
-
-
Gutierrez, L.1
Mauriat, M.2
Guenin, S.3
Pelloux, J.4
Lefebvre, J.F.5
Louvet, R.6
Rusterucci, C.7
Moritz, T.8
Guerineau, F.9
Bellini, C.10
van Wuytswinkel, O.11
-
31
-
-
57749113093
-
Towards a systematic validation of references in real-time RT-PCR
-
Gutierrez L, Mauriat M, Pelloux J, Bellini C, van Wuytswinkel O (2008b) Towards a systematic validation of references in real-time RT-PCR. Plant Cell 20(7): 1734-1735.
-
(2008)
Plant Cell
, vol.20
, Issue.7
, pp. 1734-1735
-
-
Gutierrez, L.1
Mauriat, M.2
Pelloux, J.3
Bellini, C.4
van Wuytswinkel, O.5
-
32
-
-
79959662007
-
Assessment of candidate reference genes for expression studies in Vicia faba L. by real-time quantitative PCR
-
Gutierrez N, Gimenez MJ, Palomino C, Avila CM (2011) Assessment of candidate reference genes for expression studies in Vicia faba L. by real-time quantitative PCR. Mol Breed 28(1): 13-24.
-
(2011)
Mol Breed
, vol.28
, Issue.1
, pp. 13-24
-
-
Gutierrez, N.1
Gimenez, M.J.2
Palomino, C.3
Avila, C.M.4
-
33
-
-
57049155443
-
Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR
-
Hong SY, Seo PJ, Yang MS, Xiang F, Park CM (2008) Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR. BMC Plant Biol 8: 112.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 112
-
-
Hong, S.Y.1
Seo, P.J.2
Yang, M.S.3
Xiang, F.4
Park, C.M.5
-
34
-
-
77957943778
-
Identification and testing of superior reference genes for a starting pool of transcript normalization in Arabidopsis
-
Hong SM, Bahn SC, Lyu A, Jung HS, Ahn JH (2010) Identification and testing of superior reference genes for a starting pool of transcript normalization in Arabidopsis. Plant Cell Physiol 51(10): 1694-1706.
-
(2010)
Plant Cell Physiol
, vol.51
, Issue.10
, pp. 1694-1706
-
-
Hong, S.M.1
Bahn, S.C.2
Lyu, A.3
Jung, H.S.4
Ahn, J.H.5
-
35
-
-
70449337110
-
Evaluation of putative reference genes for gene expression normalization in soybean by quantitative real-time RT-PCR
-
Hu R, Fan C, Li H, Zhang Q, Fu YF (2009) Evaluation of putative reference genes for gene expression normalization in soybean by quantitative real-time RT-PCR. BMC Mol Biol 10: 93.
-
(2009)
BMC Mol Biol
, vol.10
, pp. 93
-
-
Hu, R.1
Fan, C.2
Li, H.3
Zhang, Q.4
Fu, Y.F.5
-
36
-
-
21344471138
-
Real-time RT-PCR normalisation; strategies and considerations
-
Huggett J, Dheda K, Bustin S, Zumla A (2005) Real-time RT-PCR normalisation; strategies and considerations. Genes Immun 6(4): 279-284.
-
(2005)
Genes Immun
, vol.6
, Issue.4
, pp. 279-284
-
-
Huggett, J.1
Dheda, K.2
Bustin, S.3
Zumla, A.4
-
37
-
-
18944381809
-
Comparison of reference genes for quantitative real-time polymerase chain reaction analysis of gene expression in sugarcane
-
Iskandar HM, Simpson RS, Casu RE, Bonnett GD, Maclean DJ, Manners JM (2004) Comparison of reference genes for quantitative real-time polymerase chain reaction analysis of gene expression in sugarcane. Plant Mol Biol Rep 22(4): 325-337.
-
(2004)
Plant Mol Biol Rep
, vol.22
, Issue.4
, pp. 325-337
-
-
Iskandar, H.M.1
Simpson, R.S.2
Casu, R.E.3
Bonnett, G.D.4
Maclean, D.J.5
Manners, J.M.6
-
38
-
-
3042526243
-
Injuries to banana caused by adverse climate and weather
-
D. R. Jones (Ed.), Wallingford, UK: CAB International
-
Israeli Y, Lahav E (2000) Injuries to banana caused by adverse climate and weather. In: Jones DR (ed) Diseases of Banana, Abacá and Enset. CAB International, Wallingford, UK, pp 351-374.
-
(2000)
Diseases of Banana, Abacá and Enset
, pp. 351-374
-
-
Israeli, Y.1
Lahav, E.2
-
39
-
-
33646854724
-
Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR
-
Jain M, Nijhawan A, Tyagi AK, Khurana JP (2006) Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR. Biochem Biophys Res Commun 345(2): 646-651.
-
(2006)
Biochem Biophys Res Commun
, vol.345
, Issue.2
, pp. 646-651
-
-
Jain, M.1
Nijhawan, A.2
Tyagi, A.K.3
Khurana, J.P.4
-
40
-
-
79959903517
-
Validation of reference genes as internal control for studying viral infections in cereals by quantitative real-time RT-PCR
-
Jarosova J, Kundu JK (2010) Validation of reference genes as internal control for studying viral infections in cereals by quantitative real-time RT-PCR. BMC Plant Biol 10: 146.
-
(2010)
BMC Plant Biol
, vol.10
, pp. 146
-
-
Jarosova, J.1
Kundu, J.K.2
-
41
-
-
70350120571
-
Disease and pest constraints to banana production
-
In: Proceedings of the international symposium on recent advances in banana crop protection for sustainable production and improved livelihoods, White River, South Africa, 10-14 September 2007
-
Jones DR (2009) Disease and pest constraints to banana production. In: Proceedings of the international symposium on recent advances in banana crop protection for sustainable production and improved livelihoods, White River, South Africa, 10-14 September 2007. Acta Hort 828: 21-36.
-
(2009)
Acta Hort
, vol.828
, pp. 21-36
-
-
Jones, D.R.1
-
42
-
-
0344531001
-
Normalization of reverse transcription quantitative-PCR with housekeeping genes in rice
-
Kim BR, Nam HY, Kim SU, Kim SI, Chang YJ (2003) Normalization of reverse transcription quantitative-PCR with housekeeping genes in rice. Biotechnol Lett 25(21): 1869-1872.
-
(2003)
Biotechnol Lett
, vol.25
, Issue.21
, pp. 1869-1872
-
-
Kim, B.R.1
Nam, H.Y.2
Kim, S.U.3
Kim, S.I.4
Chang, Y.J.5
-
43
-
-
77649276290
-
Validation of reference genes for quantitative RT-PCR studies of gene expression in perennial ryegrass (Lolium perenne L.)
-
Lee JM, Roche JR, Donaghy DJ, Thrush A, Sathish P (2010) Validation of reference genes for quantitative RT-PCR studies of gene expression in perennial ryegrass (Lolium perenne L.). BMC Mol Biol 11: 8.
-
(2010)
BMC Mol Biol
, vol.11
, pp. 8
-
-
Lee, J.M.1
Roche, J.R.2
Donaghy, D.J.3
Thrush, A.4
Sathish, P.5
-
44
-
-
79959266478
-
Screening of valid reference genes for real-time RT-PCR data normalization in Hevea brasiliensis and expression validation of a sucrose transporter gene HbSUT3
-
Li H, Qin Y, Xiao X, Tang C (2011) Screening of valid reference genes for real-time RT-PCR data normalization in Hevea brasiliensis and expression validation of a sucrose transporter gene HbSUT3. Plant Sci 181(2): 132-139.
-
(2011)
Plant Sci
, vol.181
, Issue.2
, pp. 132-139
-
-
Li, H.1
Qin, Y.2
Xiao, X.3
Tang, C.4
-
45
-
-
85167520149
-
Identification of four soybean reference genes for gene expression normalization
-
Libault M, Thibivilliers S, Bilgin D, Radwan O, Benitez M, Clough S, Stacey G (2008) Identification of four soybean reference genes for gene expression normalization. Plant Genome 1: 44-54.
-
(2008)
Plant Genome
, vol.1
, pp. 44-54
-
-
Libault, M.1
Thibivilliers, S.2
Bilgin, D.3
Radwan, O.4
Benitez, M.5
Clough, S.6
Stacey, G.7
-
46
-
-
79951521045
-
Identification and validation of reference genes for normalization of transcripts from virus-infected Arabidopsis thaliana
-
Lilly ST, Drummond RSM, Pearson MN, MacDiarmid RM (2011) Identification and validation of reference genes for normalization of transcripts from virus-infected Arabidopsis thaliana. Mol Plant Microbe Interact 24(3): 294-304.
-
(2011)
Mol Plant Microbe Interact
, vol.24
, Issue.3
, pp. 294-304
-
-
Lilly, S.T.1
Drummond, R.S.M.2
Pearson, M.N.3
MacDiarmid, R.M.4
-
47
-
-
77649341683
-
Reference gene selection for qPCR analysis during somatic embryogenesis in longan tree
-
Lin YL, Lai ZX (2010) Reference gene selection for qPCR analysis during somatic embryogenesis in longan tree. Plant Sci 178(4): 359-365.
-
(2010)
Plant Sci
, vol.178
, Issue.4
, pp. 359-365
-
-
Lin, Y.L.1
Lai, Z.X.2
-
48
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2-DeltaDeltaCT method
-
Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2-DeltaDeltaCT method. Methods 25(4): 402-408.
-
(2001)
Methods
, vol.25
, Issue.4
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
49
-
-
77950476641
-
Validation of reference genes for quantitative real-time PCR during leaf and flower development in Petunia hybrida
-
Mallona I, Lischewski S, Weiss J, Hause B, Egea-Cortines M (2010) Validation of reference genes for quantitative real-time PCR during leaf and flower development in Petunia hybrida. BMC Plant Biol 10(1): 4.
-
(2010)
BMC Plant Biol
, vol.10
, Issue.1
, pp. 4
-
-
Mallona, I.1
Lischewski, S.2
Weiss, J.3
Hause, B.4
Egea-Cortines, M.5
-
50
-
-
77649159712
-
Validation of reference genes for gene expression analysis in chicory (Cichorium intybus) using quantitative real-time PCR
-
Maroufi A, van Bockstaele E, De Loose M (2010) Validation of reference genes for gene expression analysis in chicory (Cichorium intybus) using quantitative real-time PCR. BMC Mol Biol 11: 15.
-
(2010)
BMC Mol Biol
, vol.11
, pp. 15
-
-
Maroufi, A.1
van Bockstaele, E.2
De Loose, M.3
-
51
-
-
77957291480
-
Evaluation of reference genes for quantitative reverse-transcription polymerase chain reaction normalization in infected tomato plants
-
Mascia T, Santovito E, Gallitelli D, Cillo F (2010) Evaluation of reference genes for quantitative reverse-transcription polymerase chain reaction normalization in infected tomato plants. Mol Plant Pathol 11(6): 805-816.
-
(2010)
Mol Plant Pathol
, vol.11
, Issue.6
, pp. 805-816
-
-
Mascia, T.1
Santovito, E.2
Gallitelli, D.3
Cillo, F.4
-
52
-
-
34247184168
-
Use of suppression subtractive hybridization approach to identify genes differentially expressed during early banana fruit development undergoing changes in ethylene responsiveness
-
Mbeguie-Mbeguie D, Hubert O, Sabau X, Chillet M, Fils-Lycaon B, Baurens FC (2007) Use of suppression subtractive hybridization approach to identify genes differentially expressed during early banana fruit development undergoing changes in ethylene responsiveness. Plant Sci 172(5): 1025-1036.
-
(2007)
Plant Sci
, vol.172
, Issue.5
, pp. 1025-1036
-
-
Mbeguie-Mbeguie, D.1
Hubert, O.2
Sabau, X.3
Chillet, M.4
Fils-Lycaon, B.5
Baurens, F.C.6
-
53
-
-
80052265445
-
Identification of suitable reference genes for studying gene expression in cucumber plants subjected to abiotic stress and growth regulators
-
Migocka M, Papierniak A (2011) Identification of suitable reference genes for studying gene expression in cucumber plants subjected to abiotic stress and growth regulators. Mol Breed 28(3): 343-357.
-
(2011)
Mol Breed
, vol.28
, Issue.3
, pp. 343-357
-
-
Migocka, M.1
Papierniak, A.2
-
54
-
-
84982358134
-
A revised medium for rapid growth and bio assays with tobacco tissue cultures
-
Murashige T, Skoog F (1962) A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiol Plant 15(3): 473-497.
-
(1962)
Physiol Plant
, vol.15
, Issue.3
, pp. 473-497
-
-
Murashige, T.1
Skoog, F.2
-
55
-
-
27144456802
-
Housekeeping gene selection for real-time RT-PCR normalization in potato during biotic and abiotic stress
-
Nicot N, Hausman JF, Hoffmann L, Evers D (2005) Housekeeping gene selection for real-time RT-PCR normalization in potato during biotic and abiotic stress. J Exp Bot 56(421): 2907-2914.
-
(2005)
J Exp Bot
, vol.56
, Issue.421
, pp. 2907-2914
-
-
Nicot, N.1
Hausman, J.F.2
Hoffmann, L.3
Evers, D.4
-
56
-
-
33847643776
-
Quantification of mRNA using real-time RT-PCR
-
Nolan T, Hands RE, Bustin SA (2006) Quantification of mRNA using real-time RT-PCR. Nat Protoc 1(3): 1559-1582.
-
(2006)
Nat Protoc
, vol.1
, Issue.3
, pp. 1559-1582
-
-
Nolan, T.1
Hands, R.E.2
Bustin, S.A.3
-
57
-
-
79957966176
-
Selection of reference genes for gene expression studies in zucchini (Cucurbita pepo) using qPCR
-
Obrero A, Die JV, Roman B, Gomez P, Nadal S, Gonzalez-Verdejo CI (2011) Selection of reference genes for gene expression studies in zucchini (Cucurbita pepo) using qPCR. J Agric Food Chem 59(10): 5402-5411.
-
(2011)
J Agric Food Chem
, vol.59
, Issue.10
, pp. 5402-5411
-
-
Obrero, A.1
Die, J.V.2
Roman, B.3
Gomez, P.4
Nadal, S.5
Gonzalez-Verdejo, C.I.6
-
58
-
-
85184291364
-
-
OligoAnalyzer. Accessed 13 Feb 2011
-
OligoAnalyzer (2011) www. idtdna. eu/analyzer/Applications/OligoAnalyzer. Accessed 13 Feb 2011.
-
(2011)
-
-
-
59
-
-
64549093259
-
Identification and validation of reference genes for quantitative RT-PCR normalization in wheat
-
Paolacci AR, Tanzarella OA, Porceddu E, Ciaffi M (2009) Identification and validation of reference genes for quantitative RT-PCR normalization in wheat. BMC Mol Biol 10(1): 11.
-
(2009)
BMC Mol Biol
, vol.10
, Issue.1
, pp. 11
-
-
Paolacci, A.R.1
Tanzarella, O.A.2
Porceddu, E.3
Ciaffi, M.4
-
60
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl MW (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 29(9): e45.
-
(2001)
Nucleic Acids Res
, vol.29
, Issue.9
-
-
Pfaffl, M.W.1
-
61
-
-
1842483281
-
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: bestKeeper-Excel-based tool using pair-wise correlations
-
Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP (2004) Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: bestKeeper-Excel-based tool using pair-wise correlations. Biotechnol Lett 26(6): 509-515.
-
(2004)
Biotechnol Lett
, vol.26
, Issue.6
, pp. 509-515
-
-
Pfaffl, M.W.1
Tichopad, A.2
Prgomet, C.3
Neuvians, T.P.4
-
62
-
-
85184295251
-
-
Primer3. Accessed 13 Feb 2011
-
Primer3 (2011) http://frodo. wi. mit. edu/primer3/. Accessed 13 Feb 2011.
-
(2011)
-
-
-
63
-
-
0346728757
-
Guideline to reference gene selection for quantitative real-time PCR
-
Radonic A, Thulke S, Mackay IM, Landt O, Siegert W, Nitsche A (2004) Guideline to reference gene selection for quantitative real-time PCR. Biochem Biophys Res Commun 313(4): 856-862.
-
(2004)
Biochem Biophys Res Commun
, vol.313
, Issue.4
, pp. 856-862
-
-
Radonic, A.1
Thulke, S.2
Mackay, I.M.3
Landt, O.4
Siegert, W.5
Nitsche, A.6
-
64
-
-
0002129975
-
Quantification on the lightcycler
-
S. Meuer, C. Wittwer, and K. Nakagawara (Eds.), Heidelberg, Germany: Springer
-
Rasmussen R (2001) Quantification on the lightcycler. In: Meuer S, Wittwer C, Nakagawara K (eds) Rapid cycle real-time PCR, methods and applications. Springer, Heidelberg, Germany, pp 21-34.
-
(2001)
Rapid Cycle Real-Time PCR, Methods and Applications
, pp. 21-34
-
-
Rasmussen, R.1
-
65
-
-
33751234803
-
An optimized grapevine RNA isolation procedure and statistical determination of reference genes for real-time RT-PCR during berry development
-
Reid KE, Olsson N, Schlosser J, Peng F, Lund ST (2006) An optimized grapevine RNA isolation procedure and statistical determination of reference genes for real-time RT-PCR during berry development. BMC Plant Biol 6: 27.
-
(2006)
BMC Plant Biol
, vol.6
, pp. 27
-
-
Reid, K.E.1
Olsson, N.2
Schlosser, J.3
Peng, F.4
Lund, S.T.5
-
66
-
-
42149126123
-
Normalisation of real-time RT-PCR gene expression measurements in Arabidopsis thaliana exposed to increased metal concentrations
-
Remans T, Smeets K, Opdenakker K, Mathijsen D, Vangronsveld J, Cuypers A (2008) Normalisation of real-time RT-PCR gene expression measurements in Arabidopsis thaliana exposed to increased metal concentrations. Planta 227(6): 1343-1349.
-
(2008)
Planta
, vol.227
, Issue.6
, pp. 1343-1349
-
-
Remans, T.1
Smeets, K.2
Opdenakker, K.3
Mathijsen, D.4
Vangronsveld, J.5
Cuypers, A.6
-
67
-
-
38849207842
-
The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis life cycle
-
Rieu I, Ruiz-Rivero O, Fernandez-Garcia N, Griffiths J, Powers SJ, Gong F, Linhartova T, Eriksson S, Nilsson O, Thomas SG, Phillips AL, Hedden P (2008) The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis life cycle. Plant J 53(3): 488-504.
-
(2008)
Plant J
, vol.53
, Issue.3
, pp. 488-504
-
-
Rieu, I.1
Ruiz-Rivero, O.2
Fernandez-Garcia, N.3
Griffiths, J.4
Powers, S.J.5
Gong, F.6
Linhartova, T.7
Eriksson, S.8
Nilsson, O.9
Thomas, S.G.10
Phillips, A.L.11
Hedden, P.12
-
68
-
-
77951109455
-
Elasmobranch qPCR reference genes: a case study of hypoxia preconditioned epaulette sharks
-
Rytkonen KT, Renshaw GMC, Ashton KJ, Williams-Pritchard G, Leder EH, Nikinmaa M (2010) Elasmobranch qPCR reference genes: a case study of hypoxia preconditioned epaulette sharks. BMC Mol Biol 11: 27.
-
(2010)
BMC Mol Biol
, vol.11
, pp. 27
-
-
Rytkonen, K.T.1
Renshaw, G.M.C.2
Ashton, K.J.3
Williams-Pritchard, G.4
Leder, E.H.5
Nikinmaa, M.6
-
69
-
-
77949263596
-
Stable internal reference genes for normalization of real-time RT-PCR in tobacco (Nicotiana tabacum) during development and abiotic stress
-
Schmidt GW, Delaney SK (2010) Stable internal reference genes for normalization of real-time RT-PCR in tobacco (Nicotiana tabacum) during development and abiotic stress. Mol Genet Genomics 283(3): 233-241.
-
(2010)
Mol Genet Genomics
, vol.283
, Issue.3
, pp. 233-241
-
-
Schmidt, G.W.1
Delaney, S.K.2
-
70
-
-
0034694128
-
Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR
-
Schmittgen TD, Zakrajsek BA (2000) Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. J Biochem Biophys Methods 46(1-2): 69-81.
-
(2000)
J Biochem Biophys Methods
, vol.46
, Issue.1-2
, pp. 69-81
-
-
Schmittgen, T.D.1
Zakrajsek, B.A.2
-
71
-
-
0034668118
-
Quantitative reverse transcription-polymerase chain reaction to study mRNA decay: comparison of endpoint and real-time methods
-
Schmittgen TD, Zakrajsek BA, Mills AG, Gorn V, Singer MJ, Reed MW (2000) Quantitative reverse transcription-polymerase chain reaction to study mRNA decay: comparison of endpoint and real-time methods. Anal Biochem 285(2): 194-204.
-
(2000)
Anal Biochem
, vol.285
, Issue.2
, pp. 194-204
-
-
Schmittgen, T.D.1
Zakrajsek, B.A.2
Mills, A.G.3
Gorn, V.4
Singer, M.J.5
Reed, M.W.6
-
72
-
-
80052451314
-
Cloning and characterization of a novel stress-responsive WRKY transcription factor gene (MusaWRKY71) from Musa spp. cv. Karibale Monthan (ABB group) using transformed banana cells
-
Shekhawat UKS, Ganapathi TR, Srinivas L (2011) Cloning and characterization of a novel stress-responsive WRKY transcription factor gene (MusaWRKY71) from Musa spp. cv. Karibale Monthan (ABB group) using transformed banana cells. Mol Biol Rep 38(6): 4023-4035.
-
(2011)
Mol Biol Rep
, vol.38
, Issue.6
, pp. 4023-4035
-
-
Shekhawat, U.K.S.1
Ganapathi, T.R.2
Srinivas, L.3
-
73
-
-
68749118527
-
Selection of reference genes for quantitative real-time PCR expression studies in the apomictic and sexual grass Brachiaria brizantha
-
Silveira ED, Alves-Ferreira M, Guimaraes LA, da Silva FR, Carneiro VTD (2009) Selection of reference genes for quantitative real-time PCR expression studies in the apomictic and sexual grass Brachiaria brizantha. BMC Plant Biol 9: 84.
-
(2009)
BMC Plant Biol
, vol.9
, pp. 84
-
-
Silveira, E.D.1
Alves-Ferreira, M.2
Guimaraes, L.A.3
da Silva, F.R.4
Carneiro, V.T.D.5
-
74
-
-
27144455357
-
Development of embryogenic cell suspensions from shoot meristematic tissue in bananas and plantains (Musa spp.)
-
Strosse H, Schoofs H, Panis B, Andre E, Reyniers K, Swennen R (2006) Development of embryogenic cell suspensions from shoot meristematic tissue in bananas and plantains (Musa spp.). Plant Sci 170(1): 104-112.
-
(2006)
Plant Sci
, vol.170
, Issue.1
, pp. 104-112
-
-
Strosse, H.1
Schoofs, H.2
Panis, B.3
Andre, E.4
Reyniers, K.5
Swennen, R.6
-
75
-
-
0032883806
-
Housekeeping genes as internal standards: use and limits
-
Thellin O, Zorzi W, Lakaye B, De Borman B, Coumans B, Hennen G, Grisar T, Igout A, Heinen E (1999) Housekeeping genes as internal standards: use and limits. J Biotechnol 75(2-3): 291-295.
-
(1999)
J Biotechnol
, vol.75
, Issue.2-3
, pp. 291-295
-
-
Thellin, O.1
Zorzi, W.2
Lakaye, B.3
De Borman, B.4
Coumans, B.5
Hennen, G.6
Grisar, T.7
Igout, A.8
Heinen, E.9
-
76
-
-
34548447996
-
Phylogenetic and molecular analysis of the ribulose-1,5-bisphosphate carboxylase small subunit gene family in banana
-
Thomas-Hall S, Campbell PR, Carlens K, Kawanishi E, Swennen R, Sagi L, Schenk PM (2007) Phylogenetic and molecular analysis of the ribulose-1, 5-bisphosphate carboxylase small subunit gene family in banana. J Exp Bot 58(10): 2685-2697.
-
(2007)
J Exp Bot
, vol.58
, Issue.10
, pp. 2685-2697
-
-
Thomas-Hall, S.1
Campbell, P.R.2
Carlens, K.3
Kawanishi, E.4
Swennen, R.5
Sagi, L.6
Schenk, P.M.7
-
77
-
-
68949217794
-
Selection of reliable reference genes for gene expression studies in peach using real-time PCR
-
Tong ZG, Gao ZH, Wang F, Zhou J, Zhang Z (2009) Selection of reliable reference genes for gene expression studies in peach using real-time PCR. BMC Mol Biol 10: 71.
-
(2009)
BMC Mol Biol
, vol.10
, pp. 71
-
-
Tong, Z.G.1
Gao, Z.H.2
Wang, F.3
Zhou, J.4
Zhang, Z.5
-
78
-
-
0037109753
-
Quantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies
-
Tricarico C, Pinzani P, Bianchi S, Paglierani M, Distante V, Pazzagli M, Bustin SA, Orlando C (2002) Quantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies. Anal Biochem 309(2): 293-300.
-
(2002)
Anal Biochem
, vol.309
, Issue.2
, pp. 293-300
-
-
Tricarico, C.1
Pinzani, P.2
Bianchi, S.3
Paglierani, M.4
Distante, V.5
Pazzagli, M.6
Bustin, S.A.7
Orlando, C.8
-
79
-
-
36448987912
-
Suitable internal control genes for qRT-PCR normalization in cotton fiber development and somatic embryogenesis
-
Tu LL, Zhang XL, Liu DQ, Jin SX, Cao JL, Zhu LF, Deng FL, Tan JF, Zhang CB (2007) Suitable internal control genes for qRT-PCR normalization in cotton fiber development and somatic embryogenesis. Chin Sci Bull 52(22): 3110-3117.
-
(2007)
Chin Sci Bull
, vol.52
, Issue.22
, pp. 3110-3117
-
-
Tu, L.L.1
Zhang, X.L.2
Liu, D.Q.3
Jin, S.X.4
Cao, J.L.5
Zhu, L.F.6
Deng, F.L.7
Tan, J.F.8
Zhang, C.B.9
-
80
-
-
78651422978
-
Drought is a major yield loss factor for rainfed East African highland banana
-
van Asten PJA, Fermont AM, Taulya G (2011) Drought is a major yield loss factor for rainfed East African highland banana. Agric Water Manage 98: 541-552.
-
(2011)
Agric Water Manage
, vol.98
, pp. 541-552
-
-
van Asten, P.J.A.1
Fermont, A.M.2
Taulya, G.3
-
81
-
-
34247475336
-
Tolerance in banana to Fusarium wilt is associated with early up-regulation of cell wall-strengthening genes in the roots
-
van den Berg N, Berger DK, Hein I, Birch PRJ, Wingfield MJ, Viljoen A (2007) Tolerance in banana to Fusarium wilt is associated with early up-regulation of cell wall-strengthening genes in the roots. Mol Plant Pathol 8(3): 333-341.
-
(2007)
Mol Plant Pathol
, vol.8
, Issue.3
, pp. 333-341
-
-
van den Berg, N.1
Berger, D.K.2
Hein, I.3
Birch, P.R.J.4
Wingfield, M.J.5
Viljoen, A.6
-
82
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
-
RESEARCH0034. 1-research0034. 11
-
Vandesompele J, De Preter K, Pattyn F, Poppe B, van Roy N, De Paepe A, Speleman F (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3(7): RESEARCH0034. 1-research0034. 11.
-
(2002)
Genome Biol
, vol.3
, Issue.7
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
83
-
-
77049088223
-
Selection of appropriate reference genes for gene expression studies by quantitative real-time polymerase chain reaction in cucumber
-
Wan HJ, Zhao ZG, Qian CT, Sui YH, Malik AA, Chen JF (2010) Selection of appropriate reference genes for gene expression studies by quantitative real-time polymerase chain reaction in cucumber. Anal Biochem 399(2): 257-261.
-
(2010)
Anal Biochem
, vol.399
, Issue.2
, pp. 257-261
-
-
Wan, H.J.1
Zhao, Z.G.2
Qian, C.T.3
Sui, Y.H.4
Malik, A.A.5
Chen, J.F.6
-
84
-
-
77953649494
-
Cloning of an ADP-ribosylation factor gene from banana (Musa acuminata) and its expression patterns in postharvest ripening fruit
-
Wang YA, Wu J, Xu BY, Liu JH, Zhang JB, Jia CH, Jin ZQ (2010) Cloning of an ADP-ribosylation factor gene from banana (Musa acuminata) and its expression patterns in postharvest ripening fruit. J Plant Physiol 167(12): 989-995.
-
(2010)
J Plant Physiol
, vol.167
, Issue.12
, pp. 989-995
-
-
Wang, Y.A.1
Wu, J.2
Xu, B.Y.3
Liu, J.H.4
Zhang, J.B.5
Jia, C.H.6
Jin, Z.Q.7
-
85
-
-
77949263647
-
Characterization of reference genes for quantitative real-time PCR analysis in various tissues of Salvia miltiorrhiza
-
Yang Y, Hou S, Cui G, Chen S, Wei J, Huang L (2010) Characterization of reference genes for quantitative real-time PCR analysis in various tissues of Salvia miltiorrhiza. Mol Biol Rep 37(1): 507-513.
-
(2010)
Mol Biol Rep
, vol.37
, Issue.1
, pp. 507-513
-
-
Yang, Y.1
Hou, S.2
Cui, G.3
Chen, S.4
Wei, J.5
Huang, L.6
|